|
Name |
Accession |
Description |
Interval |
E-value |
| PRK13481 |
PRK13481 |
glycosyltransferase; Provisional |
36-267 |
2.76e-152 |
|
glycosyltransferase; Provisional
Pssm-ID: 184078 [Multi-domain] Cd Length: 232 Bit Score: 424.22 E-value: 2.76e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 36 KKKSKRILLKILLTILIIIALFIGIMYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDERFYNHHGFDLKGT 115
Cdd:PRK13481 1 KKKSKRILLKILLTILIIIALFIGIMYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDERFYKHHGFDLKGT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 116 TRALFSTISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANH 195
Cdd:PRK13481 81 TRALFSTISDRDVQGGSTITQQVVKNYFYDNERSFTRKVKELFVAHRVEKQYSKNEILSFYLNNIYFGDNQYTLEGAANH 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 612905346 196 YFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINNMSENFTQRVSTNLEKMKQQNYINETQYQQAMSQL 267
Cdd:PRK13481 161 YFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINDMSENFTQRVSTNLEKMKQQNYINETQYQQAMSQL 232
|
|
| Transgly |
pfam00912 |
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of ... |
77-250 |
5.65e-74 |
|
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.
Pssm-ID: 459993 [Multi-domain] Cd Length: 177 Bit Score: 223.55 E-value: 5.65e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 77 ENKSSFVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALFSTI-SDRDVQGGSTITQQVVKNYFYDNDRSFTRKVK 155
Cdd:pfam00912 10 EENREYVPLDDIPPALKNAVLAIEDRRFYEHGGVDPKGIARALLSNLrSGRIVQGGSTITQQLAKNLFLTPERTLTRKLK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 156 ELFVAHRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVnknsttmSHITVLQSAILASKVNAPSVYNINNMS 235
Cdd:pfam00912 90 EAVLALKLERRYSKDEILEAYLNTVYFGRGAYGIEAAARAYFGKDA-------SDLTLAEAALLAGLPQAPSRYNPLRNP 162
|
170
....*....|....*
gi 612905346 236 ENFTQRVSTNLEKMK 250
Cdd:pfam00912 163 ERAKRRRNLVLDRMV 177
|
|
| MrcB |
COG0744 |
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ... |
82-266 |
1.50e-70 |
|
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain] Cd Length: 630 Bit Score: 228.27 E-value: 1.50e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 82 FVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALFSTI-SDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVA 160
Cdd:COG0744 76 WVPLDQIPPHLKDAVVAIEDRRFYEHGGVDPKGIARALVANLtAGGVVQGGSTITQQLVKNLFLSNERTLSRKLKEALLA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 161 HRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVNKnsttmshITVLQSAILASKVNAPSVYNINNMSENFTQ 240
Cdd:COG0744 156 LKLERKYSKDEILELYLNTVYFGRGAYGIEAAAQYYFGKSASD-------LTLAEAALLAGLVKAPSYYDPYRNPEAAKE 228
|
170 180
....*....|....*....|....*.
gi 612905346 241 RVSTNLEKMKQQNYINETQYQQAMSQ 266
Cdd:COG0744 229 RRNLVLDRMVEQGYITQAEADAAKAE 254
|
|
| PBP_1a_fam |
TIGR02074 |
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan ... |
82-264 |
8.61e-59 |
|
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273955 [Multi-domain] Cd Length: 531 Bit Score: 195.17 E-value: 8.61e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 82 FVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALFSTI-SDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVA 160
Cdd:TIGR02074 4 YVPIDDIPENLINAFLAIEDRRFYDHFGIDLKGIGRAAVANItSGRVLEGGSTITQQLAKNLYLTNERTITRKIQEALLA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 161 HRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVNKnsttmshITVLQSAILASKVNAPSVYN-INNMsENFT 239
Cdd:TIGR02074 84 LKLEQKLSKDEILELYLNRIYFGNGAYGIEAAAQFYFGKSVND-------LTLAEAAMLAGLPKAPSAYNpFKNP-ERAK 155
|
170 180
....*....|....*....|....*
gi 612905346 240 QRVSTNLEKMKQQNYINETQYQQAM 264
Cdd:TIGR02074 156 DRRNLVLSNMVENGYITAEEAEEAI 180
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK13481 |
PRK13481 |
glycosyltransferase; Provisional |
36-267 |
2.76e-152 |
|
glycosyltransferase; Provisional
Pssm-ID: 184078 [Multi-domain] Cd Length: 232 Bit Score: 424.22 E-value: 2.76e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 36 KKKSKRILLKILLTILIIIALFIGIMYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDERFYNHHGFDLKGT 115
Cdd:PRK13481 1 KKKSKRILLKILLTILIIIALFIGIMYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDERFYKHHGFDLKGT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 116 TRALFSTISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANH 195
Cdd:PRK13481 81 TRALFSTISDRDVQGGSTITQQVVKNYFYDNERSFTRKVKELFVAHRVEKQYSKNEILSFYLNNIYFGDNQYTLEGAANH 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 612905346 196 YFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINNMSENFTQRVSTNLEKMKQQNYINETQYQQAMSQL 267
Cdd:PRK13481 161 YFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINDMSENFTQRVSTNLEKMKQQNYINETQYQQAMSQL 232
|
|
| Transgly |
pfam00912 |
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of ... |
77-250 |
5.65e-74 |
|
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.
Pssm-ID: 459993 [Multi-domain] Cd Length: 177 Bit Score: 223.55 E-value: 5.65e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 77 ENKSSFVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALFSTI-SDRDVQGGSTITQQVVKNYFYDNDRSFTRKVK 155
Cdd:pfam00912 10 EENREYVPLDDIPPALKNAVLAIEDRRFYEHGGVDPKGIARALLSNLrSGRIVQGGSTITQQLAKNLFLTPERTLTRKLK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 156 ELFVAHRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVnknsttmSHITVLQSAILASKVNAPSVYNINNMS 235
Cdd:pfam00912 90 EAVLALKLERRYSKDEILEAYLNTVYFGRGAYGIEAAARAYFGKDA-------SDLTLAEAALLAGLPQAPSRYNPLRNP 162
|
170
....*....|....*
gi 612905346 236 ENFTQRVSTNLEKMK 250
Cdd:pfam00912 163 ERAKRRRNLVLDRMV 177
|
|
| MrcB |
COG0744 |
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ... |
82-266 |
1.50e-70 |
|
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain] Cd Length: 630 Bit Score: 228.27 E-value: 1.50e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 82 FVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALFSTI-SDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVA 160
Cdd:COG0744 76 WVPLDQIPPHLKDAVVAIEDRRFYEHGGVDPKGIARALVANLtAGGVVQGGSTITQQLVKNLFLSNERTLSRKLKEALLA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 161 HRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVNKnsttmshITVLQSAILASKVNAPSVYNINNMSENFTQ 240
Cdd:COG0744 156 LKLERKYSKDEILELYLNTVYFGRGAYGIEAAAQYYFGKSASD-------LTLAEAALLAGLVKAPSYYDPYRNPEAAKE 228
|
170 180
....*....|....*....|....*.
gi 612905346 241 RVSTNLEKMKQQNYINETQYQQAMSQ 266
Cdd:COG0744 229 RRNLVLDRMVEQGYITQAEADAAKAE 254
|
|
| MrcA |
COG5009 |
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis]; |
82-266 |
1.25e-63 |
|
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 444033 [Multi-domain] Cd Length: 785 Bit Score: 212.71 E-value: 1.25e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 82 FVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALFSTI-SDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVA 160
Cdd:COG5009 68 PVPIEEIPPLLINAFLAAEDKRFYEHPGVDPIGIARAAVVNLrTGRRVQGGSTITQQVAKNFLLSPERTLTRKIKEAILA 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 161 HRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVNKnsttmshITVLQSAILASKVNAPSVYN-INNMsENFT 239
Cdd:COG5009 148 LRIEQELSKDEILELYLNKIYLGHRAYGVAAAAQTYFGKSLDE-------LTLAEAAMLAGLPKAPSRYNpIRNP-ERAL 219
|
170 180
....*....|....*....|....*..
gi 612905346 240 QRVSTNLEKMKQQNYINETQYQQAMSQ 266
Cdd:COG5009 220 ERRNYVLGRMLELGYITQAEYEAAKAE 246
|
|
| PBP_1a_fam |
TIGR02074 |
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan ... |
82-264 |
8.61e-59 |
|
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273955 [Multi-domain] Cd Length: 531 Bit Score: 195.17 E-value: 8.61e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 82 FVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALFSTI-SDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVA 160
Cdd:TIGR02074 4 YVPIDDIPENLINAFLAIEDRRFYDHFGIDLKGIGRAAVANItSGRVLEGGSTITQQLAKNLYLTNERTITRKIQEALLA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 161 HRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVNKnsttmshITVLQSAILASKVNAPSVYN-INNMsENFT 239
Cdd:TIGR02074 84 LKLEQKLSKDEILELYLNRIYFGNGAYGIEAAAQFYFGKSVND-------LTLAEAAMLAGLPKAPSAYNpFKNP-ERAK 155
|
170 180
....*....|....*....|....*
gi 612905346 240 QRVSTNLEKMKQQNYINETQYQQAM 264
Cdd:TIGR02074 156 DRRNLVLSNMVENGYITAEEAEEAI 180
|
|
| mrcA |
PRK11636 |
penicillin-binding protein 1a; Provisional |
89-266 |
1.80e-41 |
|
penicillin-binding protein 1a; Provisional
Pssm-ID: 183248 [Multi-domain] Cd Length: 850 Bit Score: 151.44 E-value: 1.80e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 89 PEYVKgAFISMEDERFYNHHGFDLKGTTRAL-FSTISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQY 167
Cdd:PRK11636 76 PEMVK-AFIATEDSRFYEHHGVDPVGIFRAAsVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEAFLAIRIEQLL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 168 NKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVNKnsttmshITVLQSAILASKVNAPSVYNINNMSENFTQRVSTNLE 247
Cdd:PRK11636 155 TKDEILELYLNKIYLGYRAYGVGAAAQVYFGKTVDQ-------LTLSEMAVIAGLPKAPSTFNPLYSMDRAVARRNVVLS 227
|
170
....*....|....*....
gi 612905346 248 KMKQQNYINETQYQQAMSQ 266
Cdd:PRK11636 228 RMLDEGYITQAQYDQARSE 246
|
|
| mono_pep_trsgly |
TIGR02070 |
monofunctional biosynthetic peptidoglycan transglycosylase; This family is one of the ... |
82-251 |
1.27e-31 |
|
monofunctional biosynthetic peptidoglycan transglycosylase; This family is one of the transglycosylases involved in the late stages of peptidoglycan biosynthesis. Members tend to be small, about 240 amino acids in length, and consist almost entirely of a domain described by pfam00912 for transglycosylases. Species with this protein will have several other transglycosylases as well. All species with this protein are Proteobacteria that produce murein (peptidoglycan). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273951 [Multi-domain] Cd Length: 224 Bit Score: 116.41 E-value: 1.27e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 82 FVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRAL-FSTISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVA 160
Cdd:TIGR02070 57 WRPYDQISPNLKRAVIASEDAKFVEHHGFDWEAIQDALeKNEKSGKVVRGGSTISQQLAKNLFLWSGRSYLRKGLEAWAT 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 161 HRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVnknsttmSHITVLQSAILASKVNAPSVYNINNMSENFTQ 240
Cdd:TIGR02070 137 WMLETWWSKQRILEVYLNSVEWGNGVFGAEAAARYYFKRSA-------SNLTRGQAARLAAVLPNPKYYDENRPGPYVRR 209
|
170
....*....|.
gi 612905346 241 RVSTNLEKMKQ 251
Cdd:TIGR02070 210 KATWILKQMGY 220
|
|
| PbpC |
COG4953 |
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope ... |
83-264 |
9.62e-31 |
|
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443980 [Multi-domain] Cd Length: 773 Bit Score: 120.71 E-value: 9.62e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 83 VSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALFSTI-SDRDVQGGSTITQQVVKnYFYDNDRSFTRKVKELFVAH 161
Cdd:COG4953 68 VPLDEVSPRYLQALLAYEDRRFYYHPGVNPLALLRAAWQNLrSGRIVSGGSTLTMQVAR-LLEPRPRTLSGKLRQILRAL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 162 RVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVnknsttmSHITVLQSAILASKVNAPSVYNINNMSENFTQ- 240
Cdd:COG4953 147 QLERRYSKDEILELYLNLAPYGGNIEGVEAASLAYFGKPP-------SRLSLAEAALLAVLPQAPSRRRPDRNPERARAa 219
|
170 180
....*....|....*....|....*.
gi 612905346 241 --RVstnLEKMKQQNYINETQYQQAM 264
Cdd:COG4953 220 rdRV---LARLAEAGVIDAEEAALAL 242
|
|
| PRK14850 |
PRK14850 |
penicillin-binding protein 1b; Provisional |
79-266 |
1.13e-26 |
|
penicillin-binding protein 1b; Provisional
Pssm-ID: 237835 [Multi-domain] Cd Length: 764 Bit Score: 108.78 E-value: 1.13e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 79 KSSFVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALF-STISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKEL 157
Cdd:PRK14850 156 KRLFIPRNQYPEMLIKTLLAIEDKYFYEHDGIHLSSIGRAFLvNLMSGHTIQGGSTLTQQLVKNLFLTNTRSLWRKINEI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 158 FVAHRVEKQYNKNEILSFYLNNIYFG-DNQYTLEG---AANHYFGTTVNKnsttmshITVLQSAILASKVNAPSVYNINN 233
Cdd:PRK14850 236 YMALILDRFYSKDRILELYLNEVYLGqDGNEQIRGfplASIYYFGRPINE-------LNLDQYALLVGMVKGASLYNPWT 308
|
170 180 190
....*....|....*....|....*....|...
gi 612905346 234 MSENFTQRVSTNLEKMKQQNYINETQYQQAMSQ 266
Cdd:PRK14850 309 NPNLTLKRRNLVLFLLYKQKVITRKLYKDLCSR 341
|
|
| mrcB |
PRK09506 |
bifunctional glycosyl transferase/transpeptidase; Reviewed |
82-260 |
1.46e-26 |
|
bifunctional glycosyl transferase/transpeptidase; Reviewed
Pssm-ID: 236544 [Multi-domain] Cd Length: 830 Bit Score: 108.32 E-value: 1.46e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 82 FVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALFSTI-SDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVA 160
Cdd:PRK09506 213 FVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLtAGRTVQGGSTLTQQLVKNLFLSNERSLWRKANEAYMA 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 161 HRVEKQYNKNEILSFYLNNIYF---GDNQytLEG---AANHYFGTTVNKnsttmshITVLQSAILASKVNAPSVYNINNM 234
Cdd:PRK09506 293 LIMDARYSKDRILELYLNEVYLgqsGDDQ--IRGfplASLYYFGRPVEE-------LSLDQQALLVGMVKGASLYNPWRN 363
|
170 180
....*....|....*....|....*.
gi 612905346 235 SENFTQRVSTNLEKMKQQNYINETQY 260
Cdd:PRK09506 364 PKLALERRNLVLRLLQQQQIIDQELY 389
|
|
| PBP_1c |
TIGR02073 |
penicillin-binding protein 1C; This subfamily of the penicillin binding proteins includes the ... |
83-269 |
2.38e-26 |
|
penicillin-binding protein 1C; This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273954 [Multi-domain] Cd Length: 727 Bit Score: 107.89 E-value: 2.38e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 83 VSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALFST-ISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAH 161
Cdd:TIGR02073 36 VPLEDISPKFLQALLLYEDKRFYWHPGVNPLALLRAAWQNlTNGRRVSGGSTLTMQLARLLDPELSRTLTGKLRQMWRAI 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 162 RVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANHYFGttvnKNSTTMSHItvlQSAILASKVNAPSVYNINNMSENFTQR 241
Cdd:TIGR02073 116 QLEARYSKREILEAYLNLAPYGGNLEGLRAASLIYFG----KEPSSLSLA---EAALLAALPQAPSARRLDRLPKAAKAA 188
|
170 180
....*....|....*....|....*....
gi 612905346 242 VSTNLEKMKQQNYIN-ETQYQQAMSQLNR 269
Cdd:TIGR02073 189 RDRLLDRMVEQGPDDsEQVALAALEPLPA 217
|
|
| PRK11240 |
PRK11240 |
penicillin-binding protein 1C; Provisional |
89-227 |
6.24e-13 |
|
penicillin-binding protein 1C; Provisional
Pssm-ID: 183049 [Multi-domain] Cd Length: 772 Bit Score: 68.19 E-value: 6.24e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612905346 89 PEYVKgAFISMEDERFYNHHGFDLKGTTRALFSTI-SDRDVQGGSTITQQVVKnyFYD-NDRSFTRKVKELFVAHRVEKQ 166
Cdd:PRK11240 72 PRYLE-ALINYEDRWFWKHPGVNPFSVARAAWQDLtSGRVISGGSTLTMQVAR--LLDpHPRTFGGKIRQLWRALQLEWH 148
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 612905346 167 YNKNEILSFYLNNIYFGDnqyTLEG---AANHYFGTTVnknsttmSHITVLQSAILASKVNAPS 227
Cdd:PRK11240 149 LSKREILTLYLNRAPFGG---TLQGigaASWAYLGKSP-------ANLSYAEAALLAVLPQAPS 202
|
|
| |
