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Conserved domains on  [gi|612671876|gb|EZS87962|]
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imidazolonepropionase [Staphylococcus aureus VET0159R]

Protein Classification

imidazolonepropionase( domain architecture ID 10101315)

imidazolonepropionase catalyzes the formation of N-formimidoyl-L-glutamate through the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Imidazolone-5PH cd01296
Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third ...
38-400 6.83e-162

Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.


:

Pssm-ID: 238621 [Multi-domain]  Cd Length: 371  Bit Score: 459.80  E-value: 6.83e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  38 VVIKDGKIVYAGQHTD----DYDATETIDASGKVVSPALVDAHTHLTFGGSREHEMSLKRQGKSYLEILEMGGGILSTVN 113
Cdd:cd01296    1 IAIRDGRIAAVGPAASlpapGPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTVR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 114 ATRETSEDDLFKKAEHDLLTMIKHGVLAVESKSGYGLDRENELKQLKVSNRLAEKYDLDMKHTFLGPHAVPKEASSNEAF 193
Cdd:cd01296   81 ATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLGAHAVPPEYKGREEY 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 194 LEEMIA-LLPEVK--QYADFADIFCETGVFTIEQSQHYMQKAKEAGFKVKIHADEIDPLGGLELAIDEQAISADHLVASS 270
Cdd:cd01296  161 IDLVIEeVLPAVAeeNLADFCDVFCEKGAFSLEQSRRILEAAKEAGLPVKIHADELSNIGGAELAAELGALSADHLEHTS 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 271 DKGKEKLRNSDTVAVLLPATTFYLGkEDYADARGMLDNNGAIALATDYNPGSSVTNNLQLVMAIAALKLKLSPNEVWNAV 350
Cdd:cd01296  241 DEGIAALAEAGTVAVLLPGTAFSLR-ETYPPARKLIDAGVPVALGTDFNPGSSPTSSMPLVMHLACRLMRMTPEEALTAA 319
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 612671876 351 TVNAAKAIDI--NAGTINTGDKANLVIWDAPNHEYIPYHFGINHAEKVIKDG 400
Cdd:cd01296  320 TINAAAALGLgeTVGSLEVGKQADLVILDAPSYEHLAYRFGVNLVEYVIKNG 371
 
Name Accession Description Interval E-value
Imidazolone-5PH cd01296
Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third ...
38-400 6.83e-162

Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.


Pssm-ID: 238621 [Multi-domain]  Cd Length: 371  Bit Score: 459.80  E-value: 6.83e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  38 VVIKDGKIVYAGQHTD----DYDATETIDASGKVVSPALVDAHTHLTFGGSREHEMSLKRQGKSYLEILEMGGGILSTVN 113
Cdd:cd01296    1 IAIRDGRIAAVGPAASlpapGPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTVR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 114 ATRETSEDDLFKKAEHDLLTMIKHGVLAVESKSGYGLDRENELKQLKVSNRLAEKYDLDMKHTFLGPHAVPKEASSNEAF 193
Cdd:cd01296   81 ATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLGAHAVPPEYKGREEY 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 194 LEEMIA-LLPEVK--QYADFADIFCETGVFTIEQSQHYMQKAKEAGFKVKIHADEIDPLGGLELAIDEQAISADHLVASS 270
Cdd:cd01296  161 IDLVIEeVLPAVAeeNLADFCDVFCEKGAFSLEQSRRILEAAKEAGLPVKIHADELSNIGGAELAAELGALSADHLEHTS 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 271 DKGKEKLRNSDTVAVLLPATTFYLGkEDYADARGMLDNNGAIALATDYNPGSSVTNNLQLVMAIAALKLKLSPNEVWNAV 350
Cdd:cd01296  241 DEGIAALAEAGTVAVLLPGTAFSLR-ETYPPARKLIDAGVPVALGTDFNPGSSPTSSMPLVMHLACRLMRMTPEEALTAA 319
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 612671876 351 TVNAAKAIDI--NAGTINTGDKANLVIWDAPNHEYIPYHFGINHAEKVIKDG 400
Cdd:cd01296  320 TINAAAALGLgeTVGSLEVGKQADLVILDAPSYEHLAYRFGVNLVEYVIKNG 371
hutI TIGR01224
imidazolonepropionase; This enzyme catalyzes the third step in histidine degradation. [Energy ...
35-402 6.39e-148

imidazolonepropionase; This enzyme catalyzes the third step in histidine degradation. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273512 [Multi-domain]  Cd Length: 377  Bit Score: 424.52  E-value: 6.39e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876   35 NGTVVIKDGKIVYAGQHTD--DYDATETIDASGKVVSPALVDAHTHLTFGGSREHEMSLKRQGKSYLEILEMGGGILSTV 112
Cdd:TIGR01224   3 DAVILIHGGKIVWIGQLAAlpGEEATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGILSTV 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  113 NATRETSEDDLFKKAEHDLLTMIKHGVLAVESKSGYGLDRENELKQLKVSNRLAEKYDLDMKHTFLGPHAVPKEASSNE- 191
Cdd:TIGR01224  83 RATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTTFLGAHAVPPEFQGRPd 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  192 AFLEEMIA-LLPEVK--QYADFADIFCETGVFTIEQSQHYMQKAKEAGFKVKIHADEIDPLGGLELAIDEQAISADHLVA 268
Cdd:TIGR01224 163 DYVDGICEeLIPQVAeeGLASFADVFCEAGVFSVEQSRRILQAAQEAGLPVKLHAEELSNLGGAELAAKLGAVSADHLEH 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  269 SSDKGKEKLRNSDTVAVLLPATTFYLGkEDYADARGMLDNNGAIALATDYNPGSSVTNNLQLVMAIAALKLKLSPNEVWN 348
Cdd:TIGR01224 243 ASDAGIKALAEAGTVAVLLPGTTFYLR-ETYPPARQLIDYGVPVALATDLNPGSSPTLSMQLIMSLACRLMKMTPEEALH 321
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 612671876  349 AVTVNAAKAIDI--NAGTINTGDKANLVIWDAPNHEYIPYHFGINHAEKVIKDGKV 402
Cdd:TIGR01224 322 AATVNAAYALGLgeERGTLEAGRDADLVILSAPSYAEIPYHYGVNHVHAVIKNGNI 377
HutI COG1228
Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport ...
32-406 3.74e-68

Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440841 [Multi-domain]  Cd Length: 386  Bit Score: 220.60  E-value: 3.74e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  32 VVKNGTVVIKDGKIVYAGQHTDDY--DATETIDASGKVVSPALVDAHTHLTFGGSREHEMslkrqgksyleilEMGGGIL 109
Cdd:COG1228   25 VIENGTVLVEDGKIAAVGPAADLAvpAGAEVIDATGKTVLPGLIDAHTHLGLGGGRAVEF-------------EAGGGIT 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 110 STVnatretsedDLFKKAEHDLLTMIKHGVLAVESKSGYGL-----DRENELKQLKVSNRLAEKYDLDMkhtFLGPHAVp 184
Cdd:COG1228   92 PTV---------DLVNPADKRLRRALAAGVTTVRDLPGGPLglrdaIIAGESKLLPGPRVLAAGPALSL---TGGAHAR- 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 185 keassneaFLEEMIALLPEVKQY-ADFADIFCETG--VFTIEQSQHYMQKAKEAGFKVKIHADEIDplgGLELAIDEQAI 261
Cdd:COG1228  159 --------GPEEARAALRELLAEgADYIKVFAEGGapDFSLEELRAILEAAHALGLPVAAHAHQAD---DIRLAVEAGVD 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 262 SADHLVASSDKGKEKLRNSDTVaVLLPATTFYLGKED-----------------YADARGMLDNNGAIALATDYNPGSSV 324
Cdd:COG1228  228 SIEHGTYLDDEVADLLAEAGTV-VLVPTLSLFLALLEgaaapvaakarkvreaaLANARRLHDAGVPVALGTDAGVGVPP 306
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 325 TNNLQLVMAIAAlKLKLSPNEVWNAVTVNAAKAIDI--NAGTINTGDKANLVIWDAPNHEYIPYhfgINHAEKVIKDGKV 402
Cdd:COG1228  307 GRSLHRELALAV-EAGLTPEEALRAATINAAKALGLddDVGSLEPGKLADLVLLDGDPLEDIAY---LEDVRAVMKDGRV 382

                 ....
gi 612671876 403 IVDN 406
Cdd:COG1228  383 VDRS 386
PRK06038 PRK06038
N-ethylammeline chlorohydrolase; Provisional
33-406 3.49e-18

N-ethylammeline chlorohydrolase; Provisional


Pssm-ID: 180363 [Multi-domain]  Cd Length: 430  Bit Score: 85.96  E-value: 3.49e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  33 VKNGTVVIKDGKIVYAGQHTDDyDATETIDASGKVVSPALVDAHTHLTfggsreheMSLKRQGKSYLEILEMGGGILSTV 112
Cdd:PRK06038  19 LKKGSVVIEDGTITEVSESTPG-DADTVIDAKGSVVMPGLVNTHTHAA--------MTLFRGYADDLPLAEWLNDHIWPA 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 113 NAtrETSEDDLFKKAEHDLLTMIKHGVL--------------AVESKS-----GYGL-------DRENELKQ----LKVS 162
Cdd:PRK06038  90 EA--KLTAEDVYAGSLLACLEMIKSGTTsfadmyfymdevakAVEESGlraalSYGMidlgddeKGEAELKEgkrfVKEW 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 163 NRLAEkydlDMKHTFLGPHAvPKEASsneaflEEmiaLLPEVKQYADFADIFCETGVFTIEQSQHYMqkaKEAGFKVKIH 242
Cdd:PRK06038 168 HGAAD----GRIKVMYGPHA-PYTCS------EE---FLSKVKKLANKDGVGIHIHVLETEAELNQM---KEQYGMCSVN 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 243 A-DEIDPLGGLELAIdeqaisadHLVASSDKGKEKLRNSDTVAVLLPATTFYLGkEDYADARGMLDNNGAIALATDynpG 321
Cdd:PRK06038 231 YlDDIGFLGPDVLAA--------HCVWLSDGDIEILRERGVNVSHNPVSNMKLA-SGIAPVPKLLERGVNVSLGTD---G 298
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 322 SSVTNNLQL--VMAIAALKLKLS--------PNEVWNAVTVNAAKAIDINAGTINTGDKANLVI-----------WDAPN 380
Cdd:PRK06038 299 CASNNNLDMfeEMKTAALLHKVNtmdptalpARQVLEMATVNGAKALGINTGMLKEGYLADIIIvdmnkphltpvRDVPS 378
                        410       420
                 ....*....|....*....|....*.
gi 612671876 381 HeyIPYHFGINHAEKVIKDGKVIVDN 406
Cdd:PRK06038 379 H--LVYSASGSDVDTTIVDGRILMED 402
Amidohydro_1 pfam01979
Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase ...
67-403 8.28e-13

Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilization as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included.


Pssm-ID: 460401 [Multi-domain]  Cd Length: 334  Bit Score: 69.07  E-value: 8.28e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876   67 VVSPALVDAHTHLTFGGSRehemslkrqgksyleilemgggilstvnaTRETSEDDLFKKAEHDLLTMIKHGvlaVESKS 146
Cdd:pfam01979   1 IVLPGLIDAHVHLEMGLLR-----------------------------GIPVPPEFAYEALRLGITTMLKSG---TTTVL 48
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  147 GYGLDRENELKQLKvsnRLAEKYDLDMkhTFLGPHAVPKEASSNEAFLEEMIALLPEVKQYADFADIFCETGV------- 219
Cdd:pfam01979  49 DMGATTSTGIEALL---EAAEELPLGL--RFLGPGCSLDTDGELEGRKALREKLKAGAEFIKGMADGVVFVGLaphgapt 123
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  220 FTIEQSQHYMQKAKEAGFKVKIHADEIDplGGLELAIDeqAISADHLVASSDKGKEKLRNSDTVA------VLLPATTFY 293
Cdd:pfam01979 124 FSDDELKAALEEAKKYGLPVAIHALETK--GEVEDAIA--AFGGGIEHGTHLEVAESGGLLDIIKlilahgVHLSPTEAN 199
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  294 LGKE-------------------DYADARGMLDNNGAIALATDyNPGSSVTNNLQLVMAIAAL-----KLKLSPNEVWNA 349
Cdd:pfam01979 200 LLAEhlkgagvahcpfsnsklrsGRIALRKALEDGVKVGLGTD-GAGSGNSLNMLEELRLALElqfdpEGGLSPLEALRM 278
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 612671876  350 VTVNAAKA--IDINAGTINTGDKANLVIWDAPNHEYIPYHFGINHAEKVIKDGKVI 403
Cdd:pfam01979 279 ATINPAKAlgLDDKVGSIEVGKDADLVVVDLDPLAAFFGLKPDGNVKKVIVKGKIV 334
 
Name Accession Description Interval E-value
Imidazolone-5PH cd01296
Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third ...
38-400 6.83e-162

Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.


Pssm-ID: 238621 [Multi-domain]  Cd Length: 371  Bit Score: 459.80  E-value: 6.83e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  38 VVIKDGKIVYAGQHTD----DYDATETIDASGKVVSPALVDAHTHLTFGGSREHEMSLKRQGKSYLEILEMGGGILSTVN 113
Cdd:cd01296    1 IAIRDGRIAAVGPAASlpapGPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTVR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 114 ATRETSEDDLFKKAEHDLLTMIKHGVLAVESKSGYGLDRENELKQLKVSNRLAEKYDLDMKHTFLGPHAVPKEASSNEAF 193
Cdd:cd01296   81 ATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLGAHAVPPEYKGREEY 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 194 LEEMIA-LLPEVK--QYADFADIFCETGVFTIEQSQHYMQKAKEAGFKVKIHADEIDPLGGLELAIDEQAISADHLVASS 270
Cdd:cd01296  161 IDLVIEeVLPAVAeeNLADFCDVFCEKGAFSLEQSRRILEAAKEAGLPVKIHADELSNIGGAELAAELGALSADHLEHTS 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 271 DKGKEKLRNSDTVAVLLPATTFYLGkEDYADARGMLDNNGAIALATDYNPGSSVTNNLQLVMAIAALKLKLSPNEVWNAV 350
Cdd:cd01296  241 DEGIAALAEAGTVAVLLPGTAFSLR-ETYPPARKLIDAGVPVALGTDFNPGSSPTSSMPLVMHLACRLMRMTPEEALTAA 319
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 612671876 351 TVNAAKAIDI--NAGTINTGDKANLVIWDAPNHEYIPYHFGINHAEKVIKDG 400
Cdd:cd01296  320 TINAAAALGLgeTVGSLEVGKQADLVILDAPSYEHLAYRFGVNLVEYVIKNG 371
hutI TIGR01224
imidazolonepropionase; This enzyme catalyzes the third step in histidine degradation. [Energy ...
35-402 6.39e-148

imidazolonepropionase; This enzyme catalyzes the third step in histidine degradation. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273512 [Multi-domain]  Cd Length: 377  Bit Score: 424.52  E-value: 6.39e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876   35 NGTVVIKDGKIVYAGQHTD--DYDATETIDASGKVVSPALVDAHTHLTFGGSREHEMSLKRQGKSYLEILEMGGGILSTV 112
Cdd:TIGR01224   3 DAVILIHGGKIVWIGQLAAlpGEEATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGILSTV 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  113 NATRETSEDDLFKKAEHDLLTMIKHGVLAVESKSGYGLDRENELKQLKVSNRLAEKYDLDMKHTFLGPHAVPKEASSNE- 191
Cdd:TIGR01224  83 RATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTTFLGAHAVPPEFQGRPd 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  192 AFLEEMIA-LLPEVK--QYADFADIFCETGVFTIEQSQHYMQKAKEAGFKVKIHADEIDPLGGLELAIDEQAISADHLVA 268
Cdd:TIGR01224 163 DYVDGICEeLIPQVAeeGLASFADVFCEAGVFSVEQSRRILQAAQEAGLPVKLHAEELSNLGGAELAAKLGAVSADHLEH 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  269 SSDKGKEKLRNSDTVAVLLPATTFYLGkEDYADARGMLDNNGAIALATDYNPGSSVTNNLQLVMAIAALKLKLSPNEVWN 348
Cdd:TIGR01224 243 ASDAGIKALAEAGTVAVLLPGTTFYLR-ETYPPARQLIDYGVPVALATDLNPGSSPTLSMQLIMSLACRLMKMTPEEALH 321
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 612671876  349 AVTVNAAKAIDI--NAGTINTGDKANLVIWDAPNHEYIPYHFGINHAEKVIKDGKV 402
Cdd:TIGR01224 322 AATVNAAYALGLgeERGTLEAGRDADLVILSAPSYAEIPYHYGVNHVHAVIKNGNI 377
HutI COG1228
Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport ...
32-406 3.74e-68

Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440841 [Multi-domain]  Cd Length: 386  Bit Score: 220.60  E-value: 3.74e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  32 VVKNGTVVIKDGKIVYAGQHTDDY--DATETIDASGKVVSPALVDAHTHLTFGGSREHEMslkrqgksyleilEMGGGIL 109
Cdd:COG1228   25 VIENGTVLVEDGKIAAVGPAADLAvpAGAEVIDATGKTVLPGLIDAHTHLGLGGGRAVEF-------------EAGGGIT 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 110 STVnatretsedDLFKKAEHDLLTMIKHGVLAVESKSGYGL-----DRENELKQLKVSNRLAEKYDLDMkhtFLGPHAVp 184
Cdd:COG1228   92 PTV---------DLVNPADKRLRRALAAGVTTVRDLPGGPLglrdaIIAGESKLLPGPRVLAAGPALSL---TGGAHAR- 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 185 keassneaFLEEMIALLPEVKQY-ADFADIFCETG--VFTIEQSQHYMQKAKEAGFKVKIHADEIDplgGLELAIDEQAI 261
Cdd:COG1228  159 --------GPEEARAALRELLAEgADYIKVFAEGGapDFSLEELRAILEAAHALGLPVAAHAHQAD---DIRLAVEAGVD 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 262 SADHLVASSDKGKEKLRNSDTVaVLLPATTFYLGKED-----------------YADARGMLDNNGAIALATDYNPGSSV 324
Cdd:COG1228  228 SIEHGTYLDDEVADLLAEAGTV-VLVPTLSLFLALLEgaaapvaakarkvreaaLANARRLHDAGVPVALGTDAGVGVPP 306
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 325 TNNLQLVMAIAAlKLKLSPNEVWNAVTVNAAKAIDI--NAGTINTGDKANLVIWDAPNHEYIPYhfgINHAEKVIKDGKV 402
Cdd:COG1228  307 GRSLHRELALAV-EAGLTPEEALRAATINAAKALGLddDVGSLEPGKLADLVLLDGDPLEDIAY---LEDVRAVMKDGRV 382

                 ....
gi 612671876 403 IVDN 406
Cdd:COG1228  383 VDRS 386
SsnA COG0402
Cytosine/adenosine deaminase or related metal-dependent hydrolase [Nucleotide transport and ...
28-406 1.28e-24

Cytosine/adenosine deaminase or related metal-dependent hydrolase [Nucleotide transport and metabolism, General function prediction only]; Cytosine/adenosine deaminase or related metal-dependent hydrolase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 440171 [Multi-domain]  Cd Length: 416  Bit Score: 104.52  E-value: 1.28e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  28 DELNVVKNGTVVIKDGKIVYAGQHTD---DYDATETIDASGKVVSPALVDAHTHLtfggsrehEMSLKR---QGKSYLEI 101
Cdd:COG0402   14 PAGGVLEDGAVLVEDGRIAAVGPGAElpaRYPAAEVIDAGGKLVLPGLVNTHTHL--------PQTLLRglaDDLPLLDW 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 102 LEmgggiLSTVNATRETSEDDLFKKAEHDLLTMIKHGVLAV--------ES---------KSG------YGL-------- 150
Cdd:COG0402   86 LE-----EYIWPLEARLDPEDVYAGALLALAEMLRSGTTTVadfyyvhpESadalaeaaaEAGiravlgRGLmdrgfpdg 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 151 DRENELKQLKVSNRLAEKY---DLDMKHTFLGPHAVPkeaSSNEAFLEEMIALlpevkqyadfadifcetgvftieqsqh 227
Cdd:COG0402  161 LREDADEGLADSERLIERWhgaADGRIRVALAPHAPY---TVSPELLRAAAAL--------------------------- 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 228 ymqkAKEAGFKVKIHA----DEID------PLGGLEL-----AIDEQAISAdHLVASSDKGKEKLRNSDTVAVLLPATTF 292
Cdd:COG0402  211 ----ARELGLPLHTHLaetrDEVEwvlelyGKRPVEYldelgLLGPRTLLA-HCVHLTDEEIALLAETGASVAHCPTSNL 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 293 YLGKeDYADARGMLDNNGAIALATDynpGSSVTNNLQL--VMAIAAL--KLK------LSPNEVWNAVTVNAAKAIDIN- 361
Cdd:COG0402  286 KLGS-GIAPVPRLLAAGVRVGLGTD---GAASNNSLDMfeEMRLAALlqRLRggdptaLSAREALEMATLGGARALGLDd 361
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 612671876 362 -AGTINTGDKANLVIWDAPNHEYIP---------YHFGINHAEKVIKDGKVIVDN 406
Cdd:COG0402  362 eIGSLEPGKRADLVVLDLDAPHLAPlhdplsalvYAADGRDVRTVWVAGRVVVRD 416
ATZ_TRZ_like cd01298
TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. ...
28-406 2.02e-23

TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.


Pssm-ID: 238623 [Multi-domain]  Cd Length: 411  Bit Score: 101.12  E-value: 2.02e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  28 DELNVVKNGTVVIKDGKIVYAGQHTD--DYDATETIDASGKVVSPALVDAHTHLTfggsreheMSLKRqgkSYLEILEMg 105
Cdd:cd01298   12 DPRRVLEDGDVLVEDGRIVAVGPALPlpAYPADEVIDAKGKVVMPGLVNTHTHLA--------MTLLR---GLADDLPL- 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 106 ggiLSTVNAT-----RETSEDDLFKKAEHDLLTMIKHGVL---------------AVEsKSG------YGL------DRE 153
Cdd:cd01298   80 ---MEWLKDLiwpleRLLTEEDVYLGALLALAEMIRSGTTtfadmyffypdavaeAAE-ELGiravlgRGImdlgteDVE 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 154 NELKQLKVSNRLAEKY---DLDMKHTFLGPHAVPkeaSSNEAFLEEMIAL-----------LPEVKqyADFADIFCETGV 219
Cdd:cd01298  156 ETEEALAEAERLIREWhgaADGRIRVALAPHAPY---TCSDELLREVAELareygvplhihLAETE--DEVEESLEKYGK 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 220 FTIEqsqhymqkakeagfkvkiHADEIDPLGglelaidEQAISAdHLVASSDKGKEKLRNSDTVAVLLPATTFYLGKEdY 299
Cdd:cd01298  231 RPVE------------------YLEELGLLG-------PDVVLA-HCVWLTDEEIELLAETGTGVAHNPASNMKLASG-I 283
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 300 ADARGMLDNNGAIALATDynpGSSVTNNLQLV--MAIAALKLK--------LSPNEVWNAVTVNAAKAIDIN-AGTINTG 368
Cdd:cd01298  284 APVPEMLEAGVNVGLGTD---GAASNNNLDMFeeMRLAALLQKlahgdptaLPAEEALEMATIGGAKALGLDeIGSLEVG 360
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 612671876 369 DKANLVIWDAPNHEYIPYHFGINHA---------EKVIKDGKVIVDN 406
Cdd:cd01298  361 KKADLILIDLDGPHLLPVHDPISHLvysanggdvDTVIVNGRVVMED 407
PRK06038 PRK06038
N-ethylammeline chlorohydrolase; Provisional
33-406 3.49e-18

N-ethylammeline chlorohydrolase; Provisional


Pssm-ID: 180363 [Multi-domain]  Cd Length: 430  Bit Score: 85.96  E-value: 3.49e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  33 VKNGTVVIKDGKIVYAGQHTDDyDATETIDASGKVVSPALVDAHTHLTfggsreheMSLKRQGKSYLEILEMGGGILSTV 112
Cdd:PRK06038  19 LKKGSVVIEDGTITEVSESTPG-DADTVIDAKGSVVMPGLVNTHTHAA--------MTLFRGYADDLPLAEWLNDHIWPA 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 113 NAtrETSEDDLFKKAEHDLLTMIKHGVL--------------AVESKS-----GYGL-------DRENELKQ----LKVS 162
Cdd:PRK06038  90 EA--KLTAEDVYAGSLLACLEMIKSGTTsfadmyfymdevakAVEESGlraalSYGMidlgddeKGEAELKEgkrfVKEW 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 163 NRLAEkydlDMKHTFLGPHAvPKEASsneaflEEmiaLLPEVKQYADFADIFCETGVFTIEQSQHYMqkaKEAGFKVKIH 242
Cdd:PRK06038 168 HGAAD----GRIKVMYGPHA-PYTCS------EE---FLSKVKKLANKDGVGIHIHVLETEAELNQM---KEQYGMCSVN 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 243 A-DEIDPLGGLELAIdeqaisadHLVASSDKGKEKLRNSDTVAVLLPATTFYLGkEDYADARGMLDNNGAIALATDynpG 321
Cdd:PRK06038 231 YlDDIGFLGPDVLAA--------HCVWLSDGDIEILRERGVNVSHNPVSNMKLA-SGIAPVPKLLERGVNVSLGTD---G 298
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 322 SSVTNNLQL--VMAIAALKLKLS--------PNEVWNAVTVNAAKAIDINAGTINTGDKANLVI-----------WDAPN 380
Cdd:PRK06038 299 CASNNNLDMfeEMKTAALLHKVNtmdptalpARQVLEMATVNGAKALGINTGMLKEGYLADIIIvdmnkphltpvRDVPS 378
                        410       420
                 ....*....|....*....|....*.
gi 612671876 381 HeyIPYHFGINHAEKVIKDGKVIVDN 406
Cdd:PRK06038 379 H--LVYSASGSDVDTTIVDGRILMED 402
Bact_CD cd01293
Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) ...
38-403 7.62e-18

Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.


Pssm-ID: 238618 [Multi-domain]  Cd Length: 398  Bit Score: 84.61  E-value: 7.62e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  38 VVIKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHL----TFGGSREHEMSLKrqgksyleilemGGGILSTVN 113
Cdd:cd01293   17 IAIEDGRIAAIGPALAVPPDAEEVDAKGRLVLPAFVDPHIHLdktfTGGRWPNNSGGTL------------LEAIIAWEE 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 114 ATRETSEDDLFKKAEHDLLTMIKHGVLA----VESksgyglDRENELKQLKVSNRLAEKYD--LDMKHTFLGPHAVPKEa 187
Cdd:cd01293   85 RKLLLTAEDVKERAERALELAIAHGTTAirthVDV------DPAAGLKALEALLELREEWAdlIDLQIVAFPQHGLLST- 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 188 SSNEAFLEEMIALLPEVKQYADFAdifcetgvFTIEQSQHYMQK----AKEAGFKVKIHADEIDPLG--GLELAIDEQA- 260
Cdd:cd01293  158 PGGEELMREALKMGADVVGGIPPA--------EIDEDGEESLDTlfelAQEHGLDIDLHLDETDDPGsrTLEELAEEAEr 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 261 ------ISADHLVASSDKGKEKLRN-------SDTVAVLLPATTFYL-GKEDYADARG------MLDNNG-AIALATD-- 317
Cdd:cd01293  230 rgmqgrVTCSHATALGSLPEAEVSRladllaeAGISVVSLPPINLYLqGREDTTPKRRgvtpvkELRAAGvNVALGSDnv 309
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 318 YNPGSSV-TNNLQLVMAIAALKLKLSPNE----VWNAVTVNAAKAIDINAGTINTGDKANLVIWDAPNheyiPYHF--GI 390
Cdd:cd01293  310 RDPWYPFgSGDMLEVANLAAHIAQLGTPEdlalALDLITGNAARALGLEDYGIKVGCPADLVLLDAED----VAEAvaRQ 385
                        410
                 ....*....|...
gi 612671876 391 NHAEKVIKDGKVI 403
Cdd:cd01293  386 PPRRVVIRKGRVV 398
PRK08393 PRK08393
N-ethylammeline chlorohydrolase; Provisional
28-404 2.53e-16

N-ethylammeline chlorohydrolase; Provisional


Pssm-ID: 181411 [Multi-domain]  Cd Length: 424  Bit Score: 80.23  E-value: 2.53e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  28 DELNVVKnGTVVIKDGKIVYAGQHTDDyDATETIDASGKVVSPALVDAHTHLTFGGSR--EHEMSLKRQGKSYLEILEmg 105
Cdd:PRK08393  14 ENLKVIR-ADVLIEGNKIVEVKRNINK-PADTVIDASGSVVSPGFINAHTHSPMVLLRglADDVPLMEWLQNYIWPRE-- 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 106 ggilstvnatRETSEDDLFKKAEHDLLTMIKHGVL--------------AVESKS-----GYGL----DRENELKQLKVS 162
Cdd:PRK08393  90 ----------RKLKRKDIYWGAYLGLLEMIKSGTTtfvdmyfhmeevakATLEVGlrgylSYGMvdlgDEEKREKEIKET 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 163 NRLAE---KYDLDMKHTFLGPHAvPKEASsneafleemIALLPEVKQYADfadifcETGVFTIEQSQHYMQKAKEAGFKV 239
Cdd:PRK08393 160 EKLMEfieKLNSPRVHFVFGPHA-PYTCS---------LALLKWVREKAR------EWNKLITIHLSETMDEIKQIREKY 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 240 -KIHADEIDPLGGLelaiDEQAISAdHLVASSDKGKEKLRNSDTVAVLLPATTFYLGKEDYAdARGMLDNNGAIALATDy 318
Cdd:PRK08393 224 gKSPVVLLDEIGFL----NEDVIAA-HGVWLSSRDIRILASAGVTVAHNPASNMKLGSGVMP-LRKLLNAGVNVALGTD- 296
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 319 npGSSVTNNLQLV--MAIAALKLK---LSPN-----EVWNAVTVNAAKAIDINAGTINTGDKANLVIWDAPNHEYIPYHF 388
Cdd:PRK08393 297 --GAASNNNLDMLreMKLAALLHKvhnLDPTiadaeTVFRMATQNGAKALGLKAGVIKEGYLADIAVIDFNRPHLRPINN 374
                        410       420
                 ....*....|....*....|....*
gi 612671876 389 GINH---------AEKVIKDGKVIV 404
Cdd:PRK08393 375 PISHlvysangndVETTIVDGKIVM 399
metallo-dependent_hydrolases cd01292
Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a ...
72-357 8.70e-14

Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.


Pssm-ID: 238617 [Multi-domain]  Cd Length: 275  Bit Score: 71.21  E-value: 8.70e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  72 LVDAHTHLTFGGSREHemslkrqgksyleilemggGILSTVNATRETSEDDLFKKAEHDLLTMIKHGVLAVESKSGYGLD 151
Cdd:cd01292    1 FIDTHVHLDGSALRGT-------------------RLNLELKEAEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPP 61
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 152 RENELKQLKVSNRLAEKYDLDMKHTFLGPHAVPKEASSNEAFLEEMIALLPEVKQYADFADIFCETGVFTIEQSQHYMQK 231
Cdd:cd01292   62 TTTKAAIEAVAEAARASAGIRVVLGLGIPGVPAAVDEDAEALLLELLRRGLELGAVGLKLAGPYTATGLSDESLRRVLEE 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 232 AKEAGFKVKIHADE-IDPLGGLELAID----EQAISADHLVASSDKGKEKLRNSDTVAVLLPATTFYLG--KEDYADARG 304
Cdd:cd01292  142 ARKLGLPVVIHAGElPDPTRALEDLVAllrlGGRVVIGHVSHLDPELLELLKEAGVSLEVCPLSNYLLGrdGEGAEALRR 221
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 612671876 305 MLDNNGAIALATDYNPGSSVTNNLQLV-MAIAALKLKLSPNEVWNAVTVNAAKA 357
Cdd:cd01292  222 LLELGIRVTLGTDGPPHPLGTDLLALLrLLLKVLRLGLSLEEALRLATINPARA 275
Amidohydro_1 pfam01979
Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase ...
67-403 8.28e-13

Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilization as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included.


Pssm-ID: 460401 [Multi-domain]  Cd Length: 334  Bit Score: 69.07  E-value: 8.28e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876   67 VVSPALVDAHTHLTFGGSRehemslkrqgksyleilemgggilstvnaTRETSEDDLFKKAEHDLLTMIKHGvlaVESKS 146
Cdd:pfam01979   1 IVLPGLIDAHVHLEMGLLR-----------------------------GIPVPPEFAYEALRLGITTMLKSG---TTTVL 48
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  147 GYGLDRENELKQLKvsnRLAEKYDLDMkhTFLGPHAVPKEASSNEAFLEEMIALLPEVKQYADFADIFCETGV------- 219
Cdd:pfam01979  49 DMGATTSTGIEALL---EAAEELPLGL--RFLGPGCSLDTDGELEGRKALREKLKAGAEFIKGMADGVVFVGLaphgapt 123
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  220 FTIEQSQHYMQKAKEAGFKVKIHADEIDplGGLELAIDeqAISADHLVASSDKGKEKLRNSDTVA------VLLPATTFY 293
Cdd:pfam01979 124 FSDDELKAALEEAKKYGLPVAIHALETK--GEVEDAIA--AFGGGIEHGTHLEVAESGGLLDIIKlilahgVHLSPTEAN 199
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  294 LGKE-------------------DYADARGMLDNNGAIALATDyNPGSSVTNNLQLVMAIAAL-----KLKLSPNEVWNA 349
Cdd:pfam01979 200 LLAEhlkgagvahcpfsnsklrsGRIALRKALEDGVKVGLGTD-GAGSGNSLNMLEELRLALElqfdpEGGLSPLEALRM 278
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 612671876  350 VTVNAAKA--IDINAGTINTGDKANLVIWDAPNHEYIPYHFGINHAEKVIKDGKVI 403
Cdd:pfam01979 279 ATINPAKAlgLDDKVGSIEVGKDADLVVVDLDPLAAFFGLKPDGNVKKVIVKGKIV 334
PRK06380 PRK06380
metal-dependent hydrolase; Provisional
36-406 1.17e-12

metal-dependent hydrolase; Provisional


Pssm-ID: 180548 [Multi-domain]  Cd Length: 418  Bit Score: 69.14  E-value: 1.17e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  36 GTVVIKDGKIVYAGqhTDDYDATETIDASGKVVSPALVDAHTHLTFGGSR----------------EHEMSLKRQG---K 96
Cdd:PRK06380  22 GNVYIEGNKIVYVG--DVNEEADYIIDATGKVVMPGLINTHAHVGMTASKglfddvdleeflmktfKYDSKRTREGiynS 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  97 SYLEILEM-GGGILSTVNATreTSEDDLFKKAEhdlltmiKHGVLAVESKSGygLDRE-NELKQLKVSNrlAEKYDLDMK 174
Cdd:PRK06380 100 AKLGMYEMiNSGITAFVDLY--YSEDIIAKAAE-------ELGIRAFLSWAV--LDEEiTTQKGDPLNN--AENFIREHR 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 175 HT-----FLGPHAVpkEASSNEAFLEemiallpeVKQYADFADIFCETGVFtiEQSQHYMQKAKEAGFKVKIHADEIDPL 249
Cdd:PRK06380 167 NEelvtpSIGVQGI--YVANDETYLK--------AKEIAEKYDTIMHMHLS--ETRKEVYDHVKRTGERPVEHLEKIGFL 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 250 gglelaiDEQAISAdHLVASSDKGKEKLRNSDTVAVLLPATTFYLGKEDYADARGMLDNNGAIALATDYNpGSSVTNNLQ 329
Cdd:PRK06380 235 -------NSKLIAA-HCVWATYHEIKLLSKNGVKVSWNSVSNFKLGTGGSPPIPEMLDNGINVTIGTDSN-GSNNSLDMF 305
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 330 LVMAIAALKLKlspNEVWNA-----------VTVNAAKAIDINAGTINTGDKANLVIWDAPNHEYIP-----------YH 387
Cdd:PRK06380 306 EAMKFSALSVK---NERWDAsiikaqeildfATINAAKALELNAGSIEVGKLADLVILDARAPNMIPtrknnivsnivYS 382
                        410
                 ....*....|....*....
gi 612671876 388 FGINHAEKVIKDGKVIVDN 406
Cdd:PRK06380 383 LNPLNVDHVIVNGKILKEN 401
AllB COG0044
Dihydroorotase or related cyclic amidohydrolase [Nucleotide transport and metabolism]; ...
32-79 7.30e-12

Dihydroorotase or related cyclic amidohydrolase [Nucleotide transport and metabolism]; Dihydroorotase or related cyclic amidohydrolase is part of the Pathway/BioSystem: Pyrimidine biosynthesis


Pssm-ID: 439814 [Multi-domain]  Cd Length: 439  Bit Score: 66.65  E-value: 7.30e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 612671876  32 VVKNGTVV-----------IKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHL 79
Cdd:COG0044    1 LIKNGRVVdpggleradvlIEDGRIAAIGPDLAAPEAAEVIDATGLLVLPGLIDLHVHL 59
COG3653 COG3653
N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport and ...
32-78 6.34e-11

N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442870 [Multi-domain]  Cd Length: 528  Bit Score: 64.04  E-value: 6.34e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  32 VVKNGTVV-------------IKDGKIVYAGQhTDDYDATETIDASGKVVSPALVDAHTH 78
Cdd:COG3653    5 LIRGGTVVdgtgappfradvaIKGGRIVAVGD-LAAAEAARVIDATGLVVAPGFIDIHTH 63
COG3964 COG3964
Predicted amidohydrolase [General function prediction only];
32-85 1.91e-10

Predicted amidohydrolase [General function prediction only];


Pssm-ID: 443164 [Multi-domain]  Cd Length: 376  Bit Score: 62.11  E-value: 1.91e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 612671876  32 VVKNGTVV-------------IKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHLTFGGSR 85
Cdd:COG3964    3 LIKGGRVIdpangidgvmdiaIKDGKIAAVAKDIDAAEAKKVIDASGLYVTPGLIDLHTHVFPGGTD 69
Met_dep_hydrolase_C cd01309
Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent ...
42-403 3.30e-10

Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.


Pssm-ID: 238634 [Multi-domain]  Cd Length: 359  Bit Score: 61.17  E-value: 3.30e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  42 DGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHL-------TFGGSREHEMS-------------------LKRQ- 94
Cdd:cd01309    1 DGKIVAVGAEITTPADAEVIDAKGKHVTPGLIDAHSHLgldeeggVRETSDANEETdpvtphvraidginpddeaFKRAr 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  95 --GKSYLEILEMGGGIL---STVNATRETSEDDLFKKAEHDlltmIKhgvLAVES--KSGYGlDRENE-----------L 156
Cdd:cd01309   81 agGVTTVQVLPGSANLIggqGVVIKTDGGTIEDMFIKAPAG----LK---MALGEnpKRVYG-GKGKEpatrmgvaallR 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 157 KQLKVSNRLAEKYDLDMKHTFLGPHAVPKeassneafLEEMIALLP---EVKQYADFADifcetgvfTIEQSqhyMQKAK 233
Cdd:cd01309  153 DAFIKAQEYGRKYDLGKNAKKDPPERDLK--------LEALLPVLKgeiPVRIHAHRAD--------DILTA---IRIAK 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 234 EAGFKVKI--HADEidplgglelaideqaisadHLVAssdkgkEKLRNSDTVAVLLPATTFYLGKEDYAD----ARGMLD 307
Cdd:cd01309  214 EFGIKITIehGAEG-------------------YKLA------DELAKHGIPVIYGPTLTLPKKVEEVNDaidtNAYLLK 268
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 308 NNG-AIALATDYNpgSSVTNNLQLVmAIAALKLKLSPNEVWNAVTVNAAKA--IDINAGTINTGDKANLVIWDAPNHEYI 384
Cdd:cd01309  269 KGGvAFAISSDHP--VLNIRNLNLE-AAKAVKYGLSYEEALKAITINPAKIlgIEDRVGSLEPGKDADLVVWNGDPLEPT 345
                        410
                 ....*....|....*....
gi 612671876 385 PYhfginhAEKVIKDGKVI 403
Cdd:cd01309  346 SK------PEQVYIDGRLV 358
L-HYD_ALN cd01315
L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the ...
36-88 3.53e-10

L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.


Pssm-ID: 238640 [Multi-domain]  Cd Length: 447  Bit Score: 61.54  E-value: 3.53e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 612671876  36 GTVVIKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHLTFGGSREHE 88
Cdd:cd01315   18 ADIAVKGGKIAAIGPDIANTEAEEVIDAGGLVVMPGLIDTHVHINEPGRTEWE 70
YtcJ COG1574
Predicted amidohydrolase YtcJ [General function prediction only];
38-104 7.13e-10

Predicted amidohydrolase YtcJ [General function prediction only];


Pssm-ID: 441182 [Multi-domain]  Cd Length: 535  Bit Score: 60.58  E-value: 7.13e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 612671876  38 VVIKDGKIVYAGqhTDDY------DATETIDASGKVVSPALVDAHTHLTFGGSREHEMSLkRQGKSYLEILEM 104
Cdd:COG1574   30 VAVRDGRIVAVG--SDAEvralagPATEVIDLGGKTVLPGFIDAHVHLLGGGLALLGVDL-SGARSLDELLAR 99
PRK08323 PRK08323
phenylhydantoinase; Validated
32-85 9.23e-10

phenylhydantoinase; Validated


Pssm-ID: 236240 [Multi-domain]  Cd Length: 459  Bit Score: 60.19  E-value: 9.23e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 612671876  32 VVKNGTVV-----------IKDGKIVYAGQHTDDydatETIDASGKVVSPALVDAHTHLT--FGGSR 85
Cdd:PRK08323   4 LIKNGTVVtaddtykadvlIEDGKIAAIGANLGD----EVIDATGKYVMPGGIDPHTHMEmpFGGTV 66
YtcJ_like cd01300
YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. ...
38-104 2.75e-09

YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for phytochrome A signalling.


Pssm-ID: 238625 [Multi-domain]  Cd Length: 479  Bit Score: 58.86  E-value: 2.75e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 612671876  38 VVIKDGKIVYAGqhtDDYDA-------TETIDASGKVVSPALVDAHTHLTFGGSREHEMSLkRQGKSYLEILEM 104
Cdd:cd01300    2 VAVRDGRIVAVG---SDAEAkalkgpaTEVIDLKGKTVLPGFIDSHSHLLLGGLSLLWLDL-SGVTSKEEALAR 71
D-HYD cd01314
D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases ...
32-79 3.61e-09

D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.


Pssm-ID: 238639 [Multi-domain]  Cd Length: 447  Bit Score: 58.38  E-value: 3.61e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 612671876  32 VVKNGTVV-----------IKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHL 79
Cdd:cd01314    2 IIKNGTIVtadgsfkadilIEDGKIVAIGPNLEAPGGVEVIDATGKYVLPGGIDPHTHL 60
DHOase_IIa cd01317
Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of ...
59-384 5.89e-09

Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.


Pssm-ID: 238642 [Multi-domain]  Cd Length: 374  Bit Score: 57.25  E-value: 5.89e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  59 ETIDASGKVVSPALVDAHTHLtfggsREhemslkrQGKSYLEILEMG------GGILS---------------TVNATRE 117
Cdd:cd01317    3 EVIDAEGKILAPGLVDLHVHL-----RE-------PGFEYKETLESGakaaaaGGFTTvvcmpntnpvidnpaVVELLKN 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 118 TSEDDLFKKAEH--------------DLLTMIKHGVLAVESKSGYGLDreNELkqLKVSNRLAEKYDLDMKH-------- 175
Cdd:cd01317   71 RAKDVGIVRVLPigaltkglkgeeltEIGELLEAGAVGFSDDGKPIQD--AEL--LRRALEYAAMLDLPIIVhpedpsla 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 176 -----------TFLGPHAVPKEASsnEAFLEEMIALLPEVKQYADFADIFCETGVFTIEqsqhymqKAKEAGfkVKIHAD 244
Cdd:cd01317  147 gggvmnegkvaSRLGLPGIPPEAE--TIMVARDLELAEATGARVHFQHLSTARSLELIR-------KAKAKG--LPVTAE 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 245 eidplgglelaideqaISADHLVASSdkgkEKLRNSDTVAVLLPAttfyLGKEDYADA-RGMLdNNGAI-ALATDYNP-- 320
Cdd:cd01317  216 ----------------VTPHHLLLDD----EALESYDTNAKVNPP----LRSEEDREAlIEAL-KDGTIdAIASDHAPht 270
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 321 -------------GSSvtnNLQLVMAIAAL----KLKLSPNEVWNAVTVNAAKAIDINAGTINTGDKANLVIWDaPNHEY 383
Cdd:cd01317  271 deekdlpfaeappGII---GLETALPLLWTllvkGGLLTLPDLIRALSTNPAKILGLPPGRLEVGAPADLVLFD-PDAEW 346

                 .
gi 612671876 384 I 384
Cdd:cd01317  347 I 347
archeal_chlorohydrolases cd01305
Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the ...
67-357 7.77e-09

Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.


Pssm-ID: 238630 [Multi-domain]  Cd Length: 263  Bit Score: 56.25  E-value: 7.77e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  67 VVSPALVDAHTHLtfGGSREHEMslkRQGKSYLEILEMGGGILSTVnaTRETSEDDLFKKAEHDLLTMIKHGVlavesks 146
Cdd:cd01305    1 ILIPALVNAHTHL--GDSAIKEV---GDGLPLDDLVAPPDGLKHRL--LAQADDRELAEAMRKVLRDMRETGI------- 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 147 GYGLD-RENELKQLKVSNRLAEKYDLdmkhTFLGPHAVPKEASSNEAFLEEMIALLPEVKQYADFADIfcetgvftieqs 225
Cdd:cd01305   67 GAFADfREGGVEGIELLRRALGKLPV----PFEVILGRPTEPDDPEILLEVADGLGLSSANDVDLEDI------------ 130
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 226 qhyMQKAKEAGFKVKIHADEIDPLGG---LELAIDEQAISADHLVASSDKGKEKLRNSDTVAVLLPATTFYLGKEDyADA 302
Cdd:cd01305  131 ---LELLRRRGKLFAIHASETRESVGmtdIERALDLEPDLLVHGTHLTDEDLELVRENGVPVVLCPRSNLYFGVGI-PPV 206
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 612671876 303 RGMLDNNGAIALATDyNPGSSVTN---NLQLVMAIAALKLKLSPNEVWNAVTVNAAKA 357
Cdd:cd01305  207 AELLKLGIKVLLGTD-NVMVNEPDmwaEMEFLAKYSRLQGYLSPLEILRMATVNAAEF 263
PRK08044 PRK08044
allantoinase AllB;
32-162 4.59e-08

allantoinase AllB;


Pssm-ID: 169193 [Multi-domain]  Cd Length: 449  Bit Score: 54.86  E-value: 4.59e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  32 VVKNGTVV-----------IKDGKIVYAGQHTDDydATETIDASGKVVSPALVDAHTHLTfggsrehemslkRQGKSYLE 100
Cdd:PRK08044   6 IIKNGTVIlenearvvdiaVKGGKIAAIGQDLGD--AKEVMDASGLVVSPGMVDAHTHIS------------EPGRSHWE 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 101 ILEMG------GGI-------LSTVNAT-RETSEDDLFKKAEhdlltmikhGVLAVESKS-----GYGLDRENELKQLKV 161
Cdd:PRK08044  72 GYETGtraaakGGIttmiempLNQLPATvDRASIELKFDAAK---------GKLTIDAAQlgglvSYNLDRLHELDEVGV 142

                 .
gi 612671876 162 S 162
Cdd:PRK08044 143 V 143
D-aminoacylase cd01297
D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of ...
32-95 4.60e-08

D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.


Pssm-ID: 238622 [Multi-domain]  Cd Length: 415  Bit Score: 54.61  E-value: 4.60e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 612671876  32 VVKNGTVV-------------IKDGKIVYAGQhTDDYDATETIDASGKVVSPALVDAHTH--LTFGGSREHEMSLkRQG 95
Cdd:cd01297    3 VIRNGTVVdgtgappftadvgIRDGRIAAIGP-ILSTSAREVIDAAGLVVAPGFIDVHTHydGQVFWDPDLRPSS-RQG 79
AdeC COG1001
Adenine deaminase [Nucleotide transport and metabolism];
32-78 6.09e-08

Adenine deaminase [Nucleotide transport and metabolism];


Pssm-ID: 440625 [Multi-domain]  Cd Length: 559  Bit Score: 54.72  E-value: 6.09e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  32 VVKNGTVV-------------IKDGKIVYAGQHTDDydATETIDASGKVVSPALVDAHTH 78
Cdd:COG1001    8 VIKNGRLVnvftgeilegdiaIAGGRIAGVGDYIGE--ATEVIDAAGRYLVPGFIDGHVH 65
pyrC PRK09357
dihydroorotase; Validated
24-79 8.70e-08

dihydroorotase; Validated


Pssm-ID: 236479 [Multi-domain]  Cd Length: 423  Bit Score: 54.05  E-value: 8.70e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 612671876  24 GKELDELNVVKNGTVVIKDGKIVYAGQhTDDYDATETIDASGKVVSPALVDAHTHL 79
Cdd:PRK09357   8 GRVIDPKGLDEVADVLIDDGKIAAIGE-NIEAEGAEVIDATGLVVAPGLVDLHVHL 62
NagA cd00854
N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl ...
22-377 2.17e-07

N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.


Pssm-ID: 238434 [Multi-domain]  Cd Length: 374  Bit Score: 52.58  E-value: 2.17e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  22 LKGKELDELNVVKNGTVVIKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHltfggsrehemslkrqgksylei 101
Cdd:cd00854    3 IKNARILTPGGLEDGAVLVEDGKIVAIGPEDELEEADEIIDLKGQYLVPGFIDIHIH----------------------- 59
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 102 lemGGGILSTVNATretsEDDLFKKAEHdlltMIKHGV---LAVESKSgyglDRENELKQLKVsnrLAEKYDLDMKHTFL 178
Cdd:cd00854   60 ---GGGGADFMDGT----AEALKTIAEA----LAKHGTtsfLPTTVTA----PPEEIAKALAA---IAEAIAEGQGAEIL 121
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 179 GPH------AVPKEASSNEAFLEE------------------MIALLPEVKQYADFADIFCETGVF--------TIEQsq 226
Cdd:cd00854  122 GIHlegpfiSPEKKGAHPPEYLRApdpeelkkwleaagglikLVTLAPELDGALELIRYLVERGIIvsighsdaTYEQ-- 199
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 227 hyMQKAKEAGFKV---------KIHADEIDPLGGLELAIDEQA-ISAD--HL------VASSDKGKEKL-------Rnsd 281
Cdd:cd00854  200 --AVAAFEAGATHvthlfnamsPLHHREPGVVGAALSDDDVYAeLIADgiHVhpaavrLAYRAKGADKIvlvtdamA--- 274
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 282 tvAVLLPATTFYLGKEDY--ADARGMLDnNGAIAlatdynpGSSVTNNLQLVMAIAalKLKLSPNEVWNAVTVNAAKAID 359
Cdd:cd00854  275 --AAGLPDGEYELGGQTVtvKDGVARLA-DGTLA-------GSTLTMDQAVRNMVK--WGGCPLEEAVRMASLNPAKLLG 342
                        410       420
                 ....*....|....*....|
gi 612671876 360 INA--GTINTGDKANLVIWD 377
Cdd:cd00854  343 LDDrkGSLKPGKDADLVVLD 362
PRK05985 PRK05985
cytosine deaminase; Provisional
38-85 2.84e-07

cytosine deaminase; Provisional


Pssm-ID: 180337 [Multi-domain]  Cd Length: 391  Bit Score: 52.24  E-value: 2.84e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 612671876  38 VVIKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHL--TFGGSR 85
Cdd:PRK05985  19 ILIRDGRIAAIGPALAAPPGAEVEDGGGALALPGLVDGHIHLdkTFWGDP 68
PRK09237 PRK09237
amidohydrolase/deacetylase family metallohydrolase;
38-83 3.95e-07

amidohydrolase/deacetylase family metallohydrolase;


Pssm-ID: 236423 [Multi-domain]  Cd Length: 380  Bit Score: 51.77  E-value: 3.95e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 612671876  38 VVIKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHLTFGG 83
Cdd:PRK09237  21 IAIEDGKIAAVAGDIDGSQAKKVIDLSGLYVSPGWIDLHVHVYPGS 66
PRK07213 PRK07213
chlorohydrolase; Provisional
22-375 4.43e-07

chlorohydrolase; Provisional


Pssm-ID: 235969 [Multi-domain]  Cd Length: 375  Bit Score: 51.58  E-value: 4.43e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  22 LKGKELDelnvVKNGTVVIKDGKIVyagQHTDDYDATETIDASGKVVsPALVDAHTHLtfGGSrehemSLKRQG--KSYL 99
Cdd:PRK07213  10 LYGEDFE----PKKGNLVIEDGIIK---GFTNEVHEGNVIDAKGLVI-PPLINAHTHI--GDS-----SIKDIGigKSLD 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 100 EILEMGGGIlstVNATRETSEDDLFKKAEHD-LLTMIKHGVlavesksGYGLD-RENELKQLKVSNRLAekYDLDMKHTF 177
Cdd:PRK07213  75 ELVKPPNGL---KHKFLNSCSDKELVEGMKEgLYDMYNNGI-------KAFCDfREGGIKGINLLKKAS--SDLPIKPII 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 178 LGPhavPKEASSNEAFLeemiallpEVKQYADFADIFCETGV--FTIEQSQHYMQKAKEAGFKVKIHADEidPLGGLELA 255
Cdd:PRK07213 143 LGR---PTEADENELKK--------EIREILKNSDGIGLSGAneYSDEELKFICKECKREKKIFSIHAAE--HKGSVEYS 209
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 256 ID-------EQAISAD-------HLVASSDKGKEKLRNSDTVAVLLPAT--TFYLGkedYADARGMLDNNGAIALATDYn 319
Cdd:PRK07213 210 LEkygmteiERLINLGfkpdfivHATHPSNDDLELLKENNIPVVVCPRAnaSFNVG---LPPLNEMLEKGILLGIGTDN- 285
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 612671876 320 pgssvtnnlqlVMAIA---------ALKL-KLSPNEVWNAVTVNAAKAID-INAGTINTGDKANLVI 375
Cdd:PRK07213 286 -----------FMANSpsifremefIYKLyHIEPKEILKMATINGAKILGlINVGLIEEGFKADFTF 341
Met_dep_hydrolase_D cd01312
Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent ...
43-396 7.00e-07

Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.


Pssm-ID: 238637 [Multi-domain]  Cd Length: 381  Bit Score: 50.91  E-value: 7.00e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  43 GKIVYAGQH---TDDYDATETIDASGKVVSPALVDAHTHLTFGGSrehemslkrqgKSYLEILEMGGGILSTVNATRETS 119
Cdd:cd01312    1 DKILEVGDYeklEKRYPGAKHEFFPNGVLLPGLINAHTHLEFSAN-----------VAQFTYGRFRAWLLSVINSRDELL 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 120 EDDLFKKAEHDLLTMIKHGVLAVESKSGYGLD-----------------------RENELKQLkVSNRLAEKydLDMKHT 176
Cdd:cd01312   70 KQPWEEAIRQGIRQMLESGTTSIGAISSDGSLlpalassglrgvffnevigsnpsAIDFKGET-FLERFKRS--KSFESQ 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 177 FLGPHAVPKEASSNEAFLeeMIALLPEVKQY-----ADFADIFCETGVFTIEQS------QHYMQKAKEAGFKVKIhaDE 245
Cdd:cd01312  147 LFIPAISPHAPYSVHPEL--AQDLIDLAKKLnlplsTHFLESKEEREWLEESKGwfkhfwESFLKLPKPKKLATAI--DF 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 246 IDPLGGLElaideQAISADHLVASSDKGKEKLRNSDTVAVLLPATTFYLGKEdYADARGMLDNNGAIALATDynpGSSVT 325
Cdd:cd01312  223 LDMLGGLG-----TRVSFVHCVYANLEEAEILASRGASIALCPRSNRLLNGG-KLDVSELKKAGIPVSLGTD---GLSSN 293
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 326 NNLQLVMAIAALkLKLSPNEVWNA--------VTVNAAKAIDINAGTINTGDKANLVIWDAP---NHEYIPYHFgINHAE 394
Cdd:cd01312  294 ISLSLLDELRAL-LDLHPEEDLLElaselllmATLGGARALGLNNGEIEAGKRADFAVFELPgpgIKEQAPLQF-ILHAK 371

                 ..
gi 612671876 395 KV 396
Cdd:cd01312  372 EV 373
PRK07228 PRK07228
5'-deoxyadenosine deaminase;
28-80 1.17e-06

5'-deoxyadenosine deaminase;


Pssm-ID: 180895 [Multi-domain]  Cd Length: 445  Bit Score: 50.38  E-value: 1.17e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 612671876  28 DELNVVKNGTVVIKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHLT 80
Cdd:PRK07228  14 NAKREIVDGDVLIEDDRIAAVGDRLDLEDYDDHIDATGKVVIPGLIQGHIHLC 66
FwdA COG1229
Formylmethanofuran dehydrogenase subunit A [Energy production and conversion];
32-78 1.44e-06

Formylmethanofuran dehydrogenase subunit A [Energy production and conversion];


Pssm-ID: 440842  Cd Length: 554  Bit Score: 50.19  E-value: 1.44e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 612671876  32 VVKNGTVV--------------IKDGKIVYAgqhTDDYDATETIDASGKVVSPALVDAHTH 78
Cdd:COG1229    4 IIKNGRVYdpangidgevmdiaIKDGKIVEE---PSDPKDAKVIDASGKVVMAGGVDIHTH 61
PRK12394 PRK12394
metallo-dependent hydrolase;
29-84 1.93e-06

metallo-dependent hydrolase;


Pssm-ID: 183497 [Multi-domain]  Cd Length: 379  Bit Score: 49.37  E-value: 1.93e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 612671876  29 ELNVVKNGTVVIKDGKIVYAGQHtDDYDATETIDASGKVVSPALVDAHTHLTFGGS 84
Cdd:PRK12394  16 ARNINEINNLRIINDIIVDADKY-PVASETRIIHADGCIVTPGLIDYHAHVFYDGT 70
NagA COG1820
N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism];
27-78 4.21e-06

N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism];


Pssm-ID: 441425 [Multi-domain]  Cd Length: 373  Bit Score: 48.56  E-value: 4.21e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 612671876  27 LDELNVVKNGTVVIKDGKIVYAGQHTDDydATETIDASGKVVSPALVDAHTH 78
Cdd:COG1820    8 FTGDGVLEDGALLIEDGRIAAIGPGAEP--DAEVIDLGGGYLAPGFIDLHVH 57
PRK15493 PRK15493
bifunctional S-methyl-5'-thioadenosine deaminase/S-adenosylhomocysteine deaminase;
27-384 4.29e-06

bifunctional S-methyl-5'-thioadenosine deaminase/S-adenosylhomocysteine deaminase;


Pssm-ID: 185390 [Multi-domain]  Cd Length: 435  Bit Score: 48.52  E-value: 4.29e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  27 LDELN-VVKNGTVVIKDGKI--VYAGQHTDDYDATETIDASGKVVSPALVDAHTHLTFGGSR-------------EHEMS 90
Cdd:PRK15493  13 MNEQNeVIENGYIIVENDQIidVNSGEFASDFEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRgigddmllqpwleTRIWP 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  91 LKRQGKSYLEILEMGGGILSTVNATrETSEDDLFKKAEHD----LLTMIKHGVLAVESKSGYGL-DRENELKQLKVSNRL 165
Cdd:PRK15493  93 LESQFTPELAVASTELGLLEMVKSG-TTSFSDMFNPIGVDqdaiMETVSRSGMRAAVSRTLFSFgTKEDEKKAIEEAEKY 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 166 AEKY--DLDMKHTFLGPHAvPKEASSNeaFLEEMIALLPEVKQYADFADIFCETGVFTIEqsQHYMQKAKEAGFKVKIHA 243
Cdd:PRK15493 172 VKRYynESGMLTTMVAPHS-PYTCSTE--LLEECARIAVENQTMVHIHLSETEREVRDIE--AQYGKRPVEYAASCGLFK 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 244 DEIDPLGGLELAIDEQAISADHLVASSDKgkeklrnsdtvavllPATTFYLGkEDYADARGMLDNNGAIALATDynpGSS 323
Cdd:PRK15493 247 RPTVIAHGVVLNDNERAFLAEHDVRVAHN---------------PNSNLKLG-SGIANVKAMLEAGIKVGIATD---SVA 307
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 612671876 324 VTNNLQLV--MAIAALKLK--------LSPNEVWNAVTVNAAKAIDI-NAGTINTGDKANLVIWDAPNHEYI 384
Cdd:PRK15493 308 SNNNLDMFeeMRIATLLQKgihqdataLPVETALTLATKGAAEVIGMkQTGSLEVGKCADFITIDPSNKPHL 379
D-hydantoinase TIGR02033
D-hydantoinase; This model represents the D-hydantoinase (dihydropyrimidinase) which primarily ...
33-79 5.62e-06

D-hydantoinase; This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.


Pssm-ID: 273937 [Multi-domain]  Cd Length: 454  Bit Score: 48.15  E-value: 5.62e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 612671876   33 VKNGTVV-----------IKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHL 79
Cdd:TIGR02033   3 IKGGTVVnaddvfqadvlIEGGKIVAVGDNLIPPDAVEVIDATGKYVLPGGIDVHTHL 60
PRK07203 PRK07203
putative aminohydrolase SsnA;
31-103 1.30e-05

putative aminohydrolase SsnA;


Pssm-ID: 235963 [Multi-domain]  Cd Length: 442  Bit Score: 47.24  E-value: 1.30e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 612671876  31 NVVKNGTVVIKDGKIVYAGQHTD---DYDATETIDASGKVVSPALVDAHTHLTFGGSRehEMSLK-RQGKSYLEILE 103
Cdd:PRK07203  17 PVIEDGAIAIEGNVIVEIGTTDElkaKYPDAEFIDAKGKLIMPGLINSHNHIYSGLAR--GMMANiPPPPDFISILK 91
PRK08204 PRK08204
hypothetical protein; Provisional
36-79 2.71e-05

hypothetical protein; Provisional


Pssm-ID: 181288 [Multi-domain]  Cd Length: 449  Bit Score: 46.15  E-value: 2.71e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 612671876  36 GTVVIKDGKIVYAGQHTDDYDAtETIDASGKVVSPALVDAHTHL 79
Cdd:PRK08204  24 GDILIEGDRIAAVAPSIEAPDA-EVVDARGMIVMPGLVDTHRHT 66
PRK07627 PRK07627
dihydroorotase; Provisional
33-74 3.55e-05

dihydroorotase; Provisional


Pssm-ID: 181059 [Multi-domain]  Cd Length: 425  Bit Score: 45.82  E-value: 3.55e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 612671876  33 VKNGTVV-------------IKDGKIVYAGQHTDDYDATETIDASGKVVSPALVD 74
Cdd:PRK07627   5 IKGGRLIdpaagtdrqadlyVAAGKIAAIGQAPAGFNADKTIDASGLIVCPGLVD 59
Amidohydro_3 pfam07969
Amidohydrolase family;
59-404 4.66e-05

Amidohydrolase family;


Pssm-ID: 400360 [Multi-domain]  Cd Length: 464  Bit Score: 45.21  E-value: 4.66e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876   59 ETIDASGKVVSPALVDAHTHLTFGGSREHEMSL-----KRQGKSYLEILEMGGGIL-STVNATRETSEDDLFKKAEHD-- 130
Cdd:pfam07969   1 EVIDAKGRLVLPGFVDPHTHLDGGGLNLRELRLpdvlpNAVVKGQAGRTPKGRWLVgEGWDEAQFAETRFPYALADLDev 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  131 -------LLTMIKH-----------------------GVLAVESKS----GYGLDRENELKQLKVSNRLAEKYDLDMKH- 175
Cdd:pfam07969  81 apdgpvlLRALHTHaavansaaldlagitkatedppgGEIARDANGegltGLLREGAYALPPLLAREAEAAAVAAALAAl 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  176 ---------------TFLGPHAVPKEASSNE------AFLEEMIALLPEVKQYADFADIF--CETGVFTIEQSQHY---- 228
Cdd:pfam07969 161 pgfgitsvdggggnvHSLDDYEPLRELTAAEklkellDAPERLGLPHSIYELRIGAMKLFadGVLGSRTAALTEPYfdap 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  229 ---------------MQKAKEAGFKVKIHADEIDPLGGLELAIDEQAI--------SADH---LVASSDKGKEKLRNSDT 282
Cdd:pfam07969 241 gtgwpdfedealaelVAAARERGLDVAIHAIGDATIDTALDAFEAVAEklgnqgrvRIEHaqgVVPYTYSQIERVAALGG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  283 VAVLLPATTFYLGKED-----YADARG------MLDNNGAIALATDYNPGS---------SVTNNLQLVMAIAALKLKLS 342
Cdd:pfam07969 321 AAGVQPVFDPLWGDWLqdrlgAERARGltpvkeLLNAGVKVALGSDAPVGPfdpwprigaAVMRQTAGGGEVLGPDEELS 400
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 612671876  343 PNEVWNAVTVNAAKAI--DINAGTINTGDKANLVIWDAP----NHEYIPYhfgiNHAEKVIKDGKVIV 404
Cdd:pfam07969 401 LEEALALYTSGPAKALglEDRKGTLGVGKDADLVVLDDDpltvDPPAIAD----IRVRLTVVDGRVVY 464
Met_dep_hydrolase_B cd01307
Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent ...
38-85 7.99e-05

Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.


Pssm-ID: 238632 [Multi-domain]  Cd Length: 338  Bit Score: 44.24  E-value: 7.99e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 612671876  38 VVIKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHLTFGGSR 85
Cdd:cd01307    2 VAIENGKIAAVGAALAAPAATQIVDAGGCYVSPGWIDLHVHVYQGGTR 49
PRK09045 PRK09045
TRZ/ATZ family hydrolase;
32-93 8.36e-05

TRZ/ATZ family hydrolase;


Pssm-ID: 236366 [Multi-domain]  Cd Length: 443  Bit Score: 44.52  E-value: 8.36e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 612671876  32 VVKNGTVVIKDGKIVY---AGQHTDDYDATETIDASGKVVSPALVDAHTHLTfggsreheMSLKR 93
Cdd:PRK09045  25 VLEDHAVAIRDGRIVAilpRAEARARYAAAETVELPDHVLIPGLINAHTHAA--------MSLLR 81
PRK06687 PRK06687
TRZ/ATZ family protein;
29-85 9.01e-05

TRZ/ATZ family protein;


Pssm-ID: 180657 [Multi-domain]  Cd Length: 419  Bit Score: 44.61  E-value: 9.01e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 612671876  29 ELNVVKNGTVVIKDGKIVYAGQHTDDY--DATETIDASGKVVSPALVDAHTHLTFGGSR 85
Cdd:PRK06687  15 DFHVYLDGILAVKDSQIVYVGQDKPAFleQAEQIIDYQGAWIMPGLVNCHTHSAMTGLR 73
PRK09060 PRK09060
dihydroorotase; Validated
32-129 9.66e-05

dihydroorotase; Validated


Pssm-ID: 181632 [Multi-domain]  Cd Length: 444  Bit Score: 44.53  E-value: 9.66e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  32 VVKNGTVV-----------IKDGKIVYAGqHTDDYDATETIDASGKVVSPALVDAHTHLtfggsREhemslkrQGKSYLE 100
Cdd:PRK09060   8 ILKGGTVVnpdgegradigIRDGRIAAIG-DLSGASAGEVIDCRGLHVLPGVIDSQVHF-----RE-------PGLEHKE 74
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 612671876 101 ILEMG--GGILSTVNATRE--------TSEDDLFKKAEH 129
Cdd:PRK09060  75 DLETGsrAAVLGGVTAVFEmpntnpltTTAEALADKLAR 113
PRK13404 PRK13404
dihydropyrimidinase; Provisional
32-79 9.95e-05

dihydropyrimidinase; Provisional


Pssm-ID: 184033 [Multi-domain]  Cd Length: 477  Bit Score: 44.30  E-value: 9.95e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 612671876  32 VVKNGTVV-----------IKDGKIVYAGQHTDDydATETIDASGKVVSPALVDAHTHL 79
Cdd:PRK13404   7 VIRGGTVVtatdtfqadigIRGGRIAALGEGLGP--GAREIDATGRLVLPGGVDSHCHI 63
PRK06189 PRK06189
allantoinase; Provisional
32-87 1.11e-04

allantoinase; Provisional


Pssm-ID: 235732 [Multi-domain]  Cd Length: 451  Bit Score: 44.31  E-value: 1.11e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 612671876  32 VVKNGTVV-----------IKDGKIVYAGQHTDDyDATETIDASGKVVSPALVDAHTHLTFGGsREH 87
Cdd:PRK06189   6 IIRGGKVVtpegvyradigIKNGKIAEIAPEISS-PAREIIDADGLYVFPGMIDVHVHFNEPG-RTH 70
PRK07583 PRK07583
cytosine deaminase;
38-142 1.21e-04

cytosine deaminase;


Pssm-ID: 236062  Cd Length: 438  Bit Score: 44.20  E-value: 1.21e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  38 VVIKDGKI---VYAGQHTDDYDAtetIDASGKVVSPALVDAHTHLTFGgsreHEMslKRQGKSyleilemGG---GILST 111
Cdd:PRK07583  43 IEIADGKIaaiLPAGGAPDELPA---VDLKGRMVWPCFVDMHTHLDKG----HIW--PRSPNP-------DGtfpGALDA 106
                         90       100       110
                 ....*....|....*....|....*....|...
gi 612671876 112 VNATRET--SEDDLFKKAEHDLLTMIKHGVLAV 142
Cdd:PRK07583 107 VTADREAhwSAEDLYRRMEFGLRCAYAHGTSAI 139
PRK09061 PRK09061
D-glutamate deacylase; Validated
38-78 1.56e-04

D-glutamate deacylase; Validated


Pssm-ID: 236369 [Multi-domain]  Cd Length: 509  Bit Score: 43.92  E-value: 1.56e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 612671876  38 VVIKDGKIVYAGqhTDDYDATETIDASGKVVSPALVDAHTH 78
Cdd:PRK09061  41 VGIKGGKIAAVG--TAAIEGDRTIDATGLVVAPGFIDLHAH 79
PRK07572 PRK07572
cytosine deaminase; Validated
40-85 1.89e-04

cytosine deaminase; Validated


Pssm-ID: 181039  Cd Length: 426  Bit Score: 43.47  E-value: 1.89e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 612671876  40 IKDGKIVYAGQHTDDyDATETIDASGKVVSPALVDAHTH----LTFGGSR 85
Cdd:PRK07572  22 IAGGRIAAVEPGLQA-EAAEEIDAAGRLVSPPFVDPHFHmdatLSYGLPR 70
FMDH_A cd01304
Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive ...
33-78 2.66e-04

Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.


Pssm-ID: 238629 [Multi-domain]  Cd Length: 541  Bit Score: 43.17  E-value: 2.66e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  33 VKNGTVV--------------IKDGKIVyagQHTDDYDATETIDASGKVVSPALVDAHTH 78
Cdd:cd01304    1 IKNGTVYdplngingekmdifIRDGKIV---ESSSGAKPAKVIDASGKVVMAGGVDMHSH 57
PRK08203 PRK08203
hydroxydechloroatrazine ethylaminohydrolase; Reviewed
35-79 2.85e-04

hydroxydechloroatrazine ethylaminohydrolase; Reviewed


Pssm-ID: 236184 [Multi-domain]  Cd Length: 451  Bit Score: 42.92  E-value: 2.85e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 612671876  35 NGTVVIKDGKIVY---AGQHTDDYDatETIDASGKVVSPALVDAHTHL 79
Cdd:PRK08203  23 DGGLVVEGGRIVEvgpGGALPQPAD--EVFDARGHVVTPGLVNTHHHF 68
PRK15446 PRK15446
phosphonate metabolism protein PhnM; Provisional
1-77 3.54e-04

phosphonate metabolism protein PhnM; Provisional


Pssm-ID: 237967 [Multi-domain]  Cd Length: 383  Bit Score: 42.47  E-value: 3.54e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 612671876   1 MNDLIINHiAELILPrstdkplkgkelDElnvVKNGTVVIKDGKIVYAGQhtDDYDATETIDASGKVVSPALVDAHT 77
Cdd:PRK15446   1 MMEMILSN-ARLVLP------------DE---VVDGSLLIEDGRIAAIDP--GASALPGAIDAEGDYLLPGLVDLHT 59
PRK09059 PRK09059
dihydroorotase; Validated
36-87 3.72e-04

dihydroorotase; Validated


Pssm-ID: 181631 [Multi-domain]  Cd Length: 429  Bit Score: 42.33  E-value: 3.72e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 612671876  36 GTVVIKDGKIVYAGQHTDDY---DATETIDASGKVVSPALVDAHTHLTFGGSrEH 87
Cdd:PRK09059  23 GTVLIEDGVIVAAGKGAGNQgapEGAEIVDCAGKAVAPGLVDARVFVGEPGA-EH 76
PRK02382 PRK02382
dihydroorotase; Provisional
31-92 4.95e-04

dihydroorotase; Provisional


Pssm-ID: 179417 [Multi-domain]  Cd Length: 443  Bit Score: 41.95  E-value: 4.95e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 612671876  31 NVVKNGTVVIKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHLtfggsREHEMSLK 92
Cdd:PRK02382  15 NSLQPRDVRIDGGKITAVGKDLDGSSSEEVIDARGMLLLPGGIDVHVHF-----REPGYTHK 71
Met_dep_hydrolase_A cd01299
Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent ...
59-86 5.17e-04

Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.


Pssm-ID: 238624 [Multi-domain]  Cd Length: 342  Bit Score: 41.90  E-value: 5.17e-04
                         10        20
                 ....*....|....*....|....*...
gi 612671876  59 ETIDASGKVVSPALVDAHTHLTFGGSRE 86
Cdd:cd01299    2 QVIDLGGKTLMPGLIDAHTHLGSDPGDL 29
Isoaspartyl-dipeptidase cd01308
Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of ...
22-93 7.03e-04

Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.


Pssm-ID: 238633 [Multi-domain]  Cd Length: 387  Bit Score: 41.61  E-value: 7.03e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  22 LKGKELDELNVVKNGTVVIKDGKI--VYAGQHTDDYDATETIDASGKVVSPALVDAHTHLTFGG------SREHEMSLKR 93
Cdd:cd01308    4 IKNAEVYAPEYLGKKDILIAGGKIlaIEDQLNLPGYENVTVVDLHGKILVPGFIDQHVHIIGGGgeggpsTRTPEVTLSD 83
PLN02942 PLN02942
dihydropyrimidinase
32-79 7.26e-04

dihydropyrimidinase


Pssm-ID: 178530  Cd Length: 486  Bit Score: 41.75  E-value: 7.26e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 612671876  32 VVKNGTVV-----------IKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHL 79
Cdd:PLN02942   8 LIKGGTVVnahhqeladvyVEDGIIVAVAPNLKVPDDVRVIDATGKFVMPGGIDPHTHL 66
PRK10027 PRK10027
cryptic adenine deaminase; Provisional
36-79 1.06e-03

cryptic adenine deaminase; Provisional


Pssm-ID: 182201 [Multi-domain]  Cd Length: 588  Bit Score: 41.35  E-value: 1.06e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 612671876  36 GTVVIKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHL 79
Cdd:PRK10027  50 GPIVIKGRYIAGVGAEYADAPALQRIDARGATAVPGFIDAHLHI 93
AdeC cd01295
Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is ...
62-405 2.13e-03

Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.


Pssm-ID: 238620 [Multi-domain]  Cd Length: 422  Bit Score: 39.90  E-value: 2.13e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876  62 DASGKVVSPALVDAHTHltfggsrehemslkrqgksyleilemgggILSTVNATREtseddlFKKAehdlltMIKHGVLA 141
Cdd:cd01295    1 DAEGKYIVPGFIDAHLH-----------------------------IESSMLTPSE------FAKA------VLPHGTTT 39
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 142 VESK-------SGygldreneLKQLKVSNRLAEKYDLDMkhtFLG-PHAVPKE-ASSNEAFL--EEMIALL--PEVKQYA 208
Cdd:cd01295   40 VIADpheianvAG--------VDGIEFMLEDAKKTPLDI---FWMlPSCVPATpFETSGAELtaEDIKELLehPEVVGLG 108
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 209 DFADIFcetGVFTIEQSQHY-MQKAKEAGFKVKIHAdeidP-LGGLELAIDEQA-ISADHLVASSDKGKEKLRN------ 279
Cdd:cd01295  109 EVMDFP---GVIEGDDEMLAkIQAAKKAGKPVDGHA----PgLSGEELNAYMAAgISTDHEAMTGEEALEKLRLgmyvml 181
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671876 280 -----SDTVAVLLPATTfylgkEDYADaRGMLDNNGaiALATDYNPGSSVTNNLQLvmaiaALKLKLSPNEVWNAVTVNA 354
Cdd:cd01295  182 regsiAKNLEALLPAIT-----EKNFR-RFMFCTDD--VHPDDLLSEGHLDYIVRR-----AIEAGIPPEDAIQMATINP 248
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 612671876 355 AKAIDI-NAGTINTGDKANLVIWDAPNHeyipyhfgiNHAEKVIKDGKVIVD 405
Cdd:cd01295  249 AECYGLhDLGAIAPGRIADIVILDDLEN---------FNITTVLAKGIAVVE 291
PRK06151 PRK06151
N-ethylammeline chlorohydrolase; Provisional
34-78 4.34e-03

N-ethylammeline chlorohydrolase; Provisional


Pssm-ID: 180428 [Multi-domain]  Cd Length: 488  Bit Score: 39.25  E-value: 4.34e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 612671876  34 KNGTVVIKDGKIVYAGQHTDDyDATETIDASGKVVSPALVDAHTH 78
Cdd:PRK06151  22 RDGEVVFEGDRILFVGHRFDG-EVDRVIDAGNALVGPGFIDLDAL 65
GDEase cd01303
Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the ...
17-78 4.51e-03

Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.


Pssm-ID: 238628 [Multi-domain]  Cd Length: 429  Bit Score: 39.18  E-value: 4.51e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 612671876  17 STDKPLKGKELDELNVVKNGTVVIKDGKIVYAGQHTDDY----DATETIDASGKVVSPALVDAHTH 78
Cdd:cd01303    8 TKSLPELELVEDALRVVEDGLIVVVDGNIIAAGAAETLKraakPGARVIDSPNQFILPGFIDTHIH 73
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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