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Concise Results
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Full Results
hypothetical protein W470_01809 [Staphylococcus aureus VET0159R]
Protein Classification
BCCT family transporter ( domain architecture ID 10003438 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport; similar to Bacillus subtilis glycine betaine transporter OpuD
List of domain hits
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
1-505
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 643.35
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 1 M NSSSP E NPNG K KYS PVFI Y SA IVVAIV VL L G AFL PE QFNY V T N NIKM WIT EKL GW Y YL I L TTII V F FC IF L I FS PI GK L 80
Cdd:COG1292 1 M SDKNK E KFKK K IDP PVFI P SA LLILAF VL W G LLF PE AAGA V L N AAFS WIT TNF GW F YL L L VLLF V V FC LY L A FS KY GK I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 81 K LG KPND KPEF N T I SWFAMLFSAGMGIGLVF Y G A AEP MA HF AT PP - TAD P KTT EA YTE A LRS TFFHWG F HAWA V Y GV V A L 159
Cdd:COG1292 81 R LG GDDA KPEF S T F SWFAMLFSAGMGIGLVF W G V AEP LY HF LS PP p GVE P GSP EA ARW A MAY TFFHWG L HAWA I Y AL V G L 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 160 ALAY SQF R K G E P GLL S RT L R PLLGD KVE GPIG IF ID V L S VFAT IV GVA V SLG M GALQIN G GL H YLF NV PN NTF VQ A III I 239
Cdd:COG1292 161 ALAY FAY R R G L P LTI S SA L Y PLLGD RIY GPIG KV ID I L A VFAT VF GVA T SLG L GALQIN A GL N YLF GI PN SLT VQ I III A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 240 V V T I LF IA SA W SGL S KGI QY LSNLN IG L GTI L MVAA LIVGPT VL ILN MLTS S T G SL L NT F LFN S FD T A A LNP qk RE W MSS 319
Cdd:COG1292 241 V I T A LF TI SA V SGL D KGI KR LSNLN MV L ALL L LLFV LIVGPT LF ILN LFVQ S L G DY L QN F VPM S LW T D A YGD -- TG W LGG 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 320 WT LY YW G WW LS W S PFVG V FIAR V S K GR S IREF IS GVLLVP AIVS F V WFSVFG VLG I ---- ET G KKHK E IFDMTP E TQ LF G 395
Cdd:COG1292 319 WT VF YW A WW IA W A PFVG L FIAR I S R GR T IREF VL GVLLVP TLFT F L WFSVFG GTA I hlel NG G GDLA E AVAAGV E AA LF A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 396 VFNHV P F G IV LS LI A LL L IAS FF I TSADS ATF VL G M Q T TF G SLN P SSMVKVV WG ISQA L I A F VLLLAGG gngaea L N A I Q 475
Cdd:COG1292 399 LLEQL P L G TI LS VL A II L VII FF V TSADS GSL VL A M L T SG G DEE P PRWQRIF WG VLIG L V A A VLLLAGG ------ L S A L Q 472
490 500 510
....*....|....*....|....*....|
gi 612671443 476 S A A II S A F PFSFV VI LM M VS FY K DANQERK 505
Cdd:COG1292 473 T A S II T A L PFSFV LL LM C VS LV K ALREDPR 502
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
1-505
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 643.35
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 1 M NSSSP E NPNG K KYS PVFI Y SA IVVAIV VL L G AFL PE QFNY V T N NIKM WIT EKL GW Y YL I L TTII V F FC IF L I FS PI GK L 80
Cdd:COG1292 1 M SDKNK E KFKK K IDP PVFI P SA LLILAF VL W G LLF PE AAGA V L N AAFS WIT TNF GW F YL L L VLLF V V FC LY L A FS KY GK I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 81 K LG KPND KPEF N T I SWFAMLFSAGMGIGLVF Y G A AEP MA HF AT PP - TAD P KTT EA YTE A LRS TFFHWG F HAWA V Y GV V A L 159
Cdd:COG1292 81 R LG GDDA KPEF S T F SWFAMLFSAGMGIGLVF W G V AEP LY HF LS PP p GVE P GSP EA ARW A MAY TFFHWG L HAWA I Y AL V G L 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 160 ALAY SQF R K G E P GLL S RT L R PLLGD KVE GPIG IF ID V L S VFAT IV GVA V SLG M GALQIN G GL H YLF NV PN NTF VQ A III I 239
Cdd:COG1292 161 ALAY FAY R R G L P LTI S SA L Y PLLGD RIY GPIG KV ID I L A VFAT VF GVA T SLG L GALQIN A GL N YLF GI PN SLT VQ I III A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 240 V V T I LF IA SA W SGL S KGI QY LSNLN IG L GTI L MVAA LIVGPT VL ILN MLTS S T G SL L NT F LFN S FD T A A LNP qk RE W MSS 319
Cdd:COG1292 241 V I T A LF TI SA V SGL D KGI KR LSNLN MV L ALL L LLFV LIVGPT LF ILN LFVQ S L G DY L QN F VPM S LW T D A YGD -- TG W LGG 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 320 WT LY YW G WW LS W S PFVG V FIAR V S K GR S IREF IS GVLLVP AIVS F V WFSVFG VLG I ---- ET G KKHK E IFDMTP E TQ LF G 395
Cdd:COG1292 319 WT VF YW A WW IA W A PFVG L FIAR I S R GR T IREF VL GVLLVP TLFT F L WFSVFG GTA I hlel NG G GDLA E AVAAGV E AA LF A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 396 VFNHV P F G IV LS LI A LL L IAS FF I TSADS ATF VL G M Q T TF G SLN P SSMVKVV WG ISQA L I A F VLLLAGG gngaea L N A I Q 475
Cdd:COG1292 399 LLEQL P L G TI LS VL A II L VII FF V TSADS GSL VL A M L T SG G DEE P PRWQRIF WG VLIG L V A A VLLLAGG ------ L S A L Q 472
490 500 510
....*....|....*....|....*....|
gi 612671443 476 S A A II S A F PFSFV VI LM M VS FY K DANQERK 505
Cdd:COG1292 473 T A S II T A L PFSFV LL LM C VS LV K ALREDPR 502
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
17-503
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 608.77
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 17 VF IY SA IVVAIV VLLG AFL PE QFNY V T N NIKM WIT EKL GW Y YL I L TT I IVF F CI FL I FS PI G KLK LG KPN DKPEF N T I SW 96
Cdd:pfam02028 1 VF AV SA GLILAF VLLG LIF PE ALSA V V N TALD WIT DNF GW F YL L L VL I FLV F AL FL A FS RY G NIR LG GDD DKPEF S T F SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 97 FAMLF S AGMGIGLVF Y G A AEP MA H FAT - PP TAD P K T T EA YTE A LRS TFFHWG F HAWA V Y GV VALALAY SQF RKG E P G L L S 175
Cdd:pfam02028 81 FAMLF A AGMGIGLVF W G V AEP LS H YLS p PP GGE P G T P EA AQQ A MAY TFFHWG L HAWA I Y AL VALALAY FAY RKG L P L L I S 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 176 RT L R PLLGD KVE GPIG IF ID V L SVF AT IV GVA V SLG M GALQIN G GL H YLF NV PN NTFV Q AI II IVV T I LF IA SA W SGL S K 255
Cdd:pfam02028 161 SA L Y PLLGD RID GPIG KA ID I L AII AT VF GVA T SLG L GALQIN A GL S YLF GI PN TLTT Q LA II AII T A LF TI SA V SGL D K 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 256 GI QY LSNLN IG L GTI L MVAA LI V GPT VL ILN MLTS S T G SL L NT F LFN SF D T AALNPQK r E W MSS WT LY YW G WW LS W S PFV 335
Cdd:pfam02028 241 GI KR LSNLN MY L AVA L LLFV LI A GPT LF ILN TFVQ S L G DY L QN F VPM SF Y T DPFGDTG - G W LGG WT IF YW A WW IA W A PFV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 336 G V FIAR V S K GR S IREFI S GVLLVP AIVS F V WFSVFG VLG I ETGKKHK ---- EIFDMT P ETQ LF GVFNHV P F G IV LS LI AL 411
Cdd:pfam02028 320 G M FIAR I S R GR T IREFI L GVLLVP TLFT F L WFSVFG GTA I YLELNGP gdla DAVEAG P PAA LF ALLEQL P L G TI LS VL AL 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 412 LLI AS FF I TSADS A T F V LG M QTTF G S LNP SSMVK V V WG ISQALI A F VLLLAGG gngaea L N A I QSA A II S A F PFSF VVI L 491
Cdd:pfam02028 400 LLI II FF V TSADS G T L V IA M LSSG G D LNP PRWQR V F WG VLLGAV A A VLLLAGG ------ L E A L QSA S II A A L PFSF ILL L 473
490
....*....|..
gi 612671443 492 M MV S FY K DANQ E 503
Cdd:pfam02028 474 M CI S LF K ALRE E 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
55-503
3.48e-159
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 461.44
E-value: 3.48e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 55 GW Y Y LILT T IIVF F CIFLI FS PI GK LK LG KPND KPEF N T I SW F AMLF S AGMG I GL V F Y G A AEP MAHFA TPP T - A D P KT T E 133
Cdd:TIGR00842 1 GW A Y ILTV T LFLG F VLYIA FS RY GK IR LG RDDE KPEF S T L SW L AMLF A AGMG A GL M F W G V AEP LTYYL TPP F g A G P TS T T 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 134 A YTE AL RS T F FHWG F H A WA V Y GV V A LALAY SQ FRKG E P GL LS RT L R PLLG D KV E GPIG IF ID V L SVF AT IV GVA V SLG M G 213
Cdd:TIGR00842 81 A QEQ AL AY T L FHWG I H P WA I Y AL V G LALAY FH FRKG L P LR LS SA L V PLLG E KV N GPIG KA ID I L ALV AT VF GVA T SLG L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 214 A L QIN G GL HY LF NV P NNTFV QA I II IV VT I L FIA S AW SG LS KGI QY LSN L N IG L GTI L MVAA LIVGPTV LI LN MLTS S T G 293
Cdd:TIGR00842 161 A P QIN A GL SA LF GI P DSFWL QA L II LC VT A L ACI S VA SG VG KGI KI LSN I N MA L AFL L LLFV LIVGPTV FL LN SFVD S I G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 294 SL L NT F LFN SF D T AA l NPQ K RE W MSS WT LY YW G WW L SWSPFVG V FIAR V S K GR S IREFI S GVLL V P AIVSFV WFSVFG VL 373
Cdd:TIGR00842 241 NY L QN F PQM SF R T DP - DDG K GG W PGG WT VF YW A WW I SWSPFVG M FIAR I S R GR T IREFI F GVLL G P TAFTWL WFSVFG NS 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 374 GIETGKKH ----- KEIFDMTPETQ LFG VFNHV P F G IVLSLI AL L LI AS FFITSADSA TF VL G - MQTTF G S L N -- P SSM V K 445
Cdd:TIGR00842 320 ALLLQQNG gfing PFVVETNGARA LFG LLAAL P L G TITMAL AL I LI II FFITSADSA SL VL A n TTSRG G Q L G ee P PKW V R 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 612671443 446 V V W GISQA LIA F VLL LA GG gngae A L N A I Q SAA II S A F PFSFV VILM M V S FY KD AN Q E 503
Cdd:TIGR00842 400 V F W AVAIG LIA L VLL FS GG ----- S L A A L Q TTT II A A L PFSFV MLVV M F S LI KD LK Q D 452
PRK09928
PRK09928 choline transport protein BetT; Provisional
1-498
1.60e-126
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 385.59
E-value: 1.60e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 1 MNSSSPENPNGKKYS PV FI Y - SA IVVAIVV L LGAFLPEQF N YVT N NIKM W ITEKL GWYYL ILT T IIVF F C IF LIF S PI G K 79
Cdd:PRK09928 2 VMTDLSHKREKDRIN PV VF Y t SA GLILLFS L TTILFTDFS N RWI N RTLN W VSKTF GWYYL LAA T LYIV F V IF IAC S RF G S 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 80 L KLG KPND KPEF NTI SW F AMLF S AG M GI G L V F YGA AEP MAHFAT PP TADPK T T EA YTE A LRS T F FH W G FHA W AV Y GVVAL 159
Cdd:PRK09928 82 I KLG PEQS KPEF SLL SW A AMLF A AG I GI D L M F FSV AEP VTQYMQ PP EGAGQ T I EA ARQ A MVW T L FH Y G LTG W SM Y ALMGM 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 160 AL A Y SQF R KGE P GLLSRT L R P LL G DKVE GPIG IFI D VLS V FA TI V G V A VS LG M G AL Q I N G GL HY LF NV P NNTFV QA II I I 239
Cdd:PRK09928 162 AL G Y FSY R YNL P LTIRSA L Y P IF G KRIN GPIG HSV D IAA V IG TI F G I A TT LG I G VV Q L N Y GL SV LF DI P ESLAA QA AL I A 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 240 VVT I LFIA S AW SG LS KGI QY LS N LN IG L GTI L MVAA L IV G P T VLI LN M L TSST G SLL N T F LFNSFDTA A LNPQK r EWM SS 319
Cdd:PRK09928 242 LSV I IATI S VT SG VN KGI RV LS E LN VL L ALG L ILFV L FM G D T SFL LN A L VLNV G DYV N R F MGMTLNSF A FDRPT - EWM NN 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 320 WTL YY W G WW LS WSPFVG V F I AR V S K GR S IR E F IS G V L LV P AIVSFV W F S V FG VLGIETGKKHKEI F DMT ---- PE TQLFG 395
Cdd:PRK09928 321 WTL FF W A WW VA WSPFVG L F L AR I S R GR T IR Q F VL G T L II P FTFTLL W L S I FG NSALYEIIHGNAA F AEE amah PE RGFYS 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 396 VFNHV P FGIVLSLI A LLLIAS F FI TSADS ATF VLG MQ T T - FGSL N PSSMV -- K V V W GISQA L IAFVL L LAG G gngaea LN 472
Cdd:PRK09928 401 LLAQY P AFTFSASV A TITGLL F YV TSADS GAL VLG NF T S k LKDI N SDAPN wl R V F W SVAIG L LTLGM L MTN G ------ IS 474
490 500
....*....|....*....|....*.
gi 612671443 473 A I Q SAAI I SAF PFSFV VILM M VSF YK 498
Cdd:PRK09928 475 A L Q NTTV I MGL PFSFV IFFV M AGL YK 500
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
1-505
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 643.35
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 1 M NSSSP E NPNG K KYS PVFI Y SA IVVAIV VL L G AFL PE QFNY V T N NIKM WIT EKL GW Y YL I L TTII V F FC IF L I FS PI GK L 80
Cdd:COG1292 1 M SDKNK E KFKK K IDP PVFI P SA LLILAF VL W G LLF PE AAGA V L N AAFS WIT TNF GW F YL L L VLLF V V FC LY L A FS KY GK I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 81 K LG KPND KPEF N T I SWFAMLFSAGMGIGLVF Y G A AEP MA HF AT PP - TAD P KTT EA YTE A LRS TFFHWG F HAWA V Y GV V A L 159
Cdd:COG1292 81 R LG GDDA KPEF S T F SWFAMLFSAGMGIGLVF W G V AEP LY HF LS PP p GVE P GSP EA ARW A MAY TFFHWG L HAWA I Y AL V G L 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 160 ALAY SQF R K G E P GLL S RT L R PLLGD KVE GPIG IF ID V L S VFAT IV GVA V SLG M GALQIN G GL H YLF NV PN NTF VQ A III I 239
Cdd:COG1292 161 ALAY FAY R R G L P LTI S SA L Y PLLGD RIY GPIG KV ID I L A VFAT VF GVA T SLG L GALQIN A GL N YLF GI PN SLT VQ I III A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 240 V V T I LF IA SA W SGL S KGI QY LSNLN IG L GTI L MVAA LIVGPT VL ILN MLTS S T G SL L NT F LFN S FD T A A LNP qk RE W MSS 319
Cdd:COG1292 241 V I T A LF TI SA V SGL D KGI KR LSNLN MV L ALL L LLFV LIVGPT LF ILN LFVQ S L G DY L QN F VPM S LW T D A YGD -- TG W LGG 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 320 WT LY YW G WW LS W S PFVG V FIAR V S K GR S IREF IS GVLLVP AIVS F V WFSVFG VLG I ---- ET G KKHK E IFDMTP E TQ LF G 395
Cdd:COG1292 319 WT VF YW A WW IA W A PFVG L FIAR I S R GR T IREF VL GVLLVP TLFT F L WFSVFG GTA I hlel NG G GDLA E AVAAGV E AA LF A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 396 VFNHV P F G IV LS LI A LL L IAS FF I TSADS ATF VL G M Q T TF G SLN P SSMVKVV WG ISQA L I A F VLLLAGG gngaea L N A I Q 475
Cdd:COG1292 399 LLEQL P L G TI LS VL A II L VII FF V TSADS GSL VL A M L T SG G DEE P PRWQRIF WG VLIG L V A A VLLLAGG ------ L S A L Q 472
490 500 510
....*....|....*....|....*....|
gi 612671443 476 S A A II S A F PFSFV VI LM M VS FY K DANQERK 505
Cdd:COG1292 473 T A S II T A L PFSFV LL LM C VS LV K ALREDPR 502
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
17-503
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 608.77
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 17 VF IY SA IVVAIV VLLG AFL PE QFNY V T N NIKM WIT EKL GW Y YL I L TT I IVF F CI FL I FS PI G KLK LG KPN DKPEF N T I SW 96
Cdd:pfam02028 1 VF AV SA GLILAF VLLG LIF PE ALSA V V N TALD WIT DNF GW F YL L L VL I FLV F AL FL A FS RY G NIR LG GDD DKPEF S T F SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 97 FAMLF S AGMGIGLVF Y G A AEP MA H FAT - PP TAD P K T T EA YTE A LRS TFFHWG F HAWA V Y GV VALALAY SQF RKG E P G L L S 175
Cdd:pfam02028 81 FAMLF A AGMGIGLVF W G V AEP LS H YLS p PP GGE P G T P EA AQQ A MAY TFFHWG L HAWA I Y AL VALALAY FAY RKG L P L L I S 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 176 RT L R PLLGD KVE GPIG IF ID V L SVF AT IV GVA V SLG M GALQIN G GL H YLF NV PN NTFV Q AI II IVV T I LF IA SA W SGL S K 255
Cdd:pfam02028 161 SA L Y PLLGD RID GPIG KA ID I L AII AT VF GVA T SLG L GALQIN A GL S YLF GI PN TLTT Q LA II AII T A LF TI SA V SGL D K 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 256 GI QY LSNLN IG L GTI L MVAA LI V GPT VL ILN MLTS S T G SL L NT F LFN SF D T AALNPQK r E W MSS WT LY YW G WW LS W S PFV 335
Cdd:pfam02028 241 GI KR LSNLN MY L AVA L LLFV LI A GPT LF ILN TFVQ S L G DY L QN F VPM SF Y T DPFGDTG - G W LGG WT IF YW A WW IA W A PFV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 336 G V FIAR V S K GR S IREFI S GVLLVP AIVS F V WFSVFG VLG I ETGKKHK ---- EIFDMT P ETQ LF GVFNHV P F G IV LS LI AL 411
Cdd:pfam02028 320 G M FIAR I S R GR T IREFI L GVLLVP TLFT F L WFSVFG GTA I YLELNGP gdla DAVEAG P PAA LF ALLEQL P L G TI LS VL AL 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 412 LLI AS FF I TSADS A T F V LG M QTTF G S LNP SSMVK V V WG ISQALI A F VLLLAGG gngaea L N A I QSA A II S A F PFSF VVI L 491
Cdd:pfam02028 400 LLI II FF V TSADS G T L V IA M LSSG G D LNP PRWQR V F WG VLLGAV A A VLLLAGG ------ L E A L QSA S II A A L PFSF ILL L 473
490
....*....|..
gi 612671443 492 M MV S FY K DANQ E 503
Cdd:pfam02028 474 M CI S LF K ALRE E 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
55-503
3.48e-159
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 461.44
E-value: 3.48e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 55 GW Y Y LILT T IIVF F CIFLI FS PI GK LK LG KPND KPEF N T I SW F AMLF S AGMG I GL V F Y G A AEP MAHFA TPP T - A D P KT T E 133
Cdd:TIGR00842 1 GW A Y ILTV T LFLG F VLYIA FS RY GK IR LG RDDE KPEF S T L SW L AMLF A AGMG A GL M F W G V AEP LTYYL TPP F g A G P TS T T 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 134 A YTE AL RS T F FHWG F H A WA V Y GV V A LALAY SQ FRKG E P GL LS RT L R PLLG D KV E GPIG IF ID V L SVF AT IV GVA V SLG M G 213
Cdd:TIGR00842 81 A QEQ AL AY T L FHWG I H P WA I Y AL V G LALAY FH FRKG L P LR LS SA L V PLLG E KV N GPIG KA ID I L ALV AT VF GVA T SLG L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 214 A L QIN G GL HY LF NV P NNTFV QA I II IV VT I L FIA S AW SG LS KGI QY LSN L N IG L GTI L MVAA LIVGPTV LI LN MLTS S T G 293
Cdd:TIGR00842 161 A P QIN A GL SA LF GI P DSFWL QA L II LC VT A L ACI S VA SG VG KGI KI LSN I N MA L AFL L LLFV LIVGPTV FL LN SFVD S I G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 294 SL L NT F LFN SF D T AA l NPQ K RE W MSS WT LY YW G WW L SWSPFVG V FIAR V S K GR S IREFI S GVLL V P AIVSFV WFSVFG VL 373
Cdd:TIGR00842 241 NY L QN F PQM SF R T DP - DDG K GG W PGG WT VF YW A WW I SWSPFVG M FIAR I S R GR T IREFI F GVLL G P TAFTWL WFSVFG NS 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 374 GIETGKKH ----- KEIFDMTPETQ LFG VFNHV P F G IVLSLI AL L LI AS FFITSADSA TF VL G - MQTTF G S L N -- P SSM V K 445
Cdd:TIGR00842 320 ALLLQQNG gfing PFVVETNGARA LFG LLAAL P L G TITMAL AL I LI II FFITSADSA SL VL A n TTSRG G Q L G ee P PKW V R 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 612671443 446 V V W GISQA LIA F VLL LA GG gngae A L N A I Q SAA II S A F PFSFV VILM M V S FY KD AN Q E 503
Cdd:TIGR00842 400 V F W AVAIG LIA L VLL FS GG ----- S L A A L Q TTT II A A L PFSFV MLVV M F S LI KD LK Q D 452
PRK09928
PRK09928 choline transport protein BetT; Provisional
1-498
1.60e-126
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 385.59
E-value: 1.60e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 1 MNSSSPENPNGKKYS PV FI Y - SA IVVAIVV L LGAFLPEQF N YVT N NIKM W ITEKL GWYYL ILT T IIVF F C IF LIF S PI G K 79
Cdd:PRK09928 2 VMTDLSHKREKDRIN PV VF Y t SA GLILLFS L TTILFTDFS N RWI N RTLN W VSKTF GWYYL LAA T LYIV F V IF IAC S RF G S 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 80 L KLG KPND KPEF NTI SW F AMLF S AG M GI G L V F YGA AEP MAHFAT PP TADPK T T EA YTE A LRS T F FH W G FHA W AV Y GVVAL 159
Cdd:PRK09928 82 I KLG PEQS KPEF SLL SW A AMLF A AG I GI D L M F FSV AEP VTQYMQ PP EGAGQ T I EA ARQ A MVW T L FH Y G LTG W SM Y ALMGM 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 160 AL A Y SQF R KGE P GLLSRT L R P LL G DKVE GPIG IFI D VLS V FA TI V G V A VS LG M G AL Q I N G GL HY LF NV P NNTFV QA II I I 239
Cdd:PRK09928 162 AL G Y FSY R YNL P LTIRSA L Y P IF G KRIN GPIG HSV D IAA V IG TI F G I A TT LG I G VV Q L N Y GL SV LF DI P ESLAA QA AL I A 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 240 VVT I LFIA S AW SG LS KGI QY LS N LN IG L GTI L MVAA L IV G P T VLI LN M L TSST G SLL N T F LFNSFDTA A LNPQK r EWM SS 319
Cdd:PRK09928 242 LSV I IATI S VT SG VN KGI RV LS E LN VL L ALG L ILFV L FM G D T SFL LN A L VLNV G DYV N R F MGMTLNSF A FDRPT - EWM NN 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 320 WTL YY W G WW LS WSPFVG V F I AR V S K GR S IR E F IS G V L LV P AIVSFV W F S V FG VLGIETGKKHKEI F DMT ---- PE TQLFG 395
Cdd:PRK09928 321 WTL FF W A WW VA WSPFVG L F L AR I S R GR T IR Q F VL G T L II P FTFTLL W L S I FG NSALYEIIHGNAA F AEE amah PE RGFYS 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 396 VFNHV P FGIVLSLI A LLLIAS F FI TSADS ATF VLG MQ T T - FGSL N PSSMV -- K V V W GISQA L IAFVL L LAG G gngaea LN 472
Cdd:PRK09928 401 LLAQY P AFTFSASV A TITGLL F YV TSADS GAL VLG NF T S k LKDI N SDAPN wl R V F W SVAIG L LTLGM L MTN G ------ IS 474
490 500
....*....|....*....|....*.
gi 612671443 473 A I Q SAAI I SAF PFSFV VILM M VSF YK 498
Cdd:PRK09928 475 A L Q NTTV I MGL PFSFV IFFV M AGL YK 500
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
17-500
3.27e-71
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 236.55
E-value: 3.27e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 17 VF IYSA I V V A I VVL L GAFLPEQF N Y V T N NIKMWI T EKL GW YYLILTTIIV F FCIF L I F S P IG K LK LG kp ND KPEF N T I SW 96
Cdd:PRK03356 14 VF FPPL I I V G I LCW L TVRDLDAA N V V I N AVFSYV T NVW GW AFEWYMVVML F GWFW L V F G P YA K KR LG -- DE KPEF S T A SW 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 97 FA M L F SAGMGIGLV F Y G AA E PMAHFA TPP - TAD P KT T E A YTEA L RSTF FHWG FHA WA V Y GVVAL A LA Y SQ F - RK GEPGLL 174
Cdd:PRK03356 92 IF M M F ASCTSAAVL F W G SI E IYYYIS TPP f GLE P NS T G A KELG L AYSL FHWG PLP WA T Y SFLSV A FG Y FF F v RK MDVIRP 171
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 175 S R TL R PL L G D K - VE G PI G IFI D VLSVF A T I VGVAV SLG MGALQINGGLHY LF NV P NNTFVQ AIII IVVT IL FIASAWS GL 253
Cdd:PRK03356 172 S S TL V PL V G E K h AK G LF G TIV D NFYLV A L I FAMGT SLG LATPLVTECMQW LF GI P HTLQLD AIII TCWI IL NAICVAC GL 251
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 254 S KG IQYL S NLNIG L GTILMVAAL IVG P T VL I L N ML T S S T G S LL NTFLFNS F D T AALN pq K REWMSS WT LY YW G WW LSWSP 333
Cdd:PRK03356 252 Q KG VRIA S DVRSY L SFLMLGWVF IVG G T SF I M N YF T D S V G M LL MYLPRML F Y T DPIG -- K GGFPQG WT VF YW A WW VIYAI 329
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 334 FVGV F I AR V S K GR SI RE FIS G VL L VPAIVSFVWFS V F G VLGIET gk KH K E I FDMTPETQLF GV FNHV ------- P FGIVL 406
Cdd:PRK03356 330 QMSI F L AR I S R GR TV RE LCF G MV L GLTASTWILWT V L G SNTLLL -- MD K N I INIPNLIEQY GV ARAI ietwaal P LSTAT 407
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 407 SLIALL L IASFFI T SADSATFV L G M Q T TFGSL --- N P SSM V KVV W G I SQAL I AF VLL LA GG gngaea L NA IQ S A A I ISAF 483
Cdd:PRK03356 408 MWGFFI L CFIATV T LINACSYT L A M S T CREVR dge E P PLL V RIG W S I LVGI I GI VLL AL GG ------ L KP IQ T A I I AGGC 481
490
....*....|....*..
gi 612671443 484 P FS FV V I LMMV SF Y KDA 500
Cdd:PRK03356 482 P LF FV N I MVTL SF I KDA 498
PRK09950
PRK09950 putative transporter; Provisional
8-503
1.70e-65
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 221.20
E-value: 1.70e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 8 N PNG KK YS P VFIY S AIV V AIV V LLGAFL P E Q FNYVT N N I KM W I T EKL G WYYLILTTIIVFFCIF L IF S PI G KLK LG K pn D 87
Cdd:PRK09950 3 N NKK KK DK P LIST S LLA V FFI V AALSLF P Q Q SAAAA N T I FQ W V T RTF G SPVQLFVLLAMILVLY L AT S KY G NIR LG E -- G 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 88 KPE FN T I SW FA M LFS AG M G IGLVFY G AA E PMAHFA TP P - TAD P KTTE A YTEALRST FFHWG FH AWA V Y GVVA L AL AY SQF 166
Cdd:PRK09950 81 KPE YS T L SW LF M FIC AG L G SSTLYW G VM E WAYYYQ TP G l NIA P RSPK A LEYSVSYS FFHWG IS AWA T Y ALAS L IM AY HFH 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 167 RKGEP GL - LS RTLRPLL G D K VE GP I G IFI D VLSVF AT IVGVAV SL GMG A LQING GL HY L FNV PNN TF VQA II I IVVTIL F 245
Cdd:PRK09950 161 VRKNK GL s LS GIIAAIT G V K PQ GP W G RLV D LMFLI AT VGALTI SL VVT A ATFTR GL SA L TGL PNN FT VQA FV I LLSGVI F 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 246 IA S AWS G LSK G I Q Y LS NLNIGLGTILMVAA LIVGPT VL I L N MLTS S T G SLLNT FL FN S FD T AALNPQK re WMSS WT LY YW 325
Cdd:PRK09950 241 CL S SYI G IDN G L Q R LS KMVGWGAFLFALLV LIVGPT EF I T N NIIN S I G LTTQN FL QM S LF T DPMGDGS -- FTRN WT VF YW 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 326 G WW L S WS P F V GV F IA RVS K GR S I R E F I S G VL L VPAI vs FV WF s V FGVL gi E TGKK H KE I F ---------- DMTP ET QLFG 395
Cdd:PRK09950 319 L WW I S YT P G V AM F VT RVS R GR K I K E V I W G LI L GSSV -- GC WF - F FGVL -- E SYAI H QF I N gvinvpqiln TLGG ET AVQQ 393
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612671443 396 VFNHV P F G IVLSLIA L LLIAS F FITSA D SATFVLGMQT T FG --- SLN P SSMVKVV W GISQA LI AFVL L LA G G gngae A L N 472
Cdd:PRK09950 394 LLSSL P A G KLFLAAY L GIMII F LASHM D AVAYTMAATS T RN lre GDD P DRGLRLF W CVVIT LI PLSI L FT G A ----- S L D 468
490 500 510
....*....|....*....|....*....|.
gi 612671443 473 AIQSAAIIS A F PF SFVVILMMVS F YKDAN Q E 503
Cdd:PRK09950 469 TMKTTVVLT A L PF LVILLIKVYG F IRWLK Q D 499
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
