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Conserved domains on  [gi|612661354|gb|EZS77601|]
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accessory Sec system protein Asp3 [Staphylococcus aureus VET0191R]

Protein Classification

accessory Sec system protein Asp3( domain architecture ID 10023125)

accessory Sec system protein Asp3 is involved in the Sec secretory system

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
acc_sec_asp3 TIGR03711
accessory Sec system protein Asp3; This protein is designated Asp3 because, along with SecY2, ...
 7-140 4.07e-66

accessory Sec system protein Asp3; This protein is designated Asp3 because, along with SecY2, SecA2, and other proteins it is part of the accessory Sec system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]


:

Pssm-ID: 163423  Cd Length: 135  Bit Score: 203.75  E-value: 4.07e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612661354    7 FKVTWNYISQTTFMYGSKVSFSN-GEVTFINPLMPSGLPIHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGS 85
Cdd:TIGR03711   1 YQIYWTDISETTYLYGTTVKFLSdNEVYFENPLMPSGETIHTWSSLTNYQAARTVPSLPLLKRGQTYKLSLNADASPEGS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 612661354   86 VYFIIIFYNKNGTKLSTEIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTI 140
Cdd:TIGR03711  81 VYLKITFFDRQGEEIGTEIEKDDSIIFIYPDEAYFYKISLISAGSESFTFHYLKI 135
 
Name Accession Description Interval E-value
acc_sec_asp3 TIGR03711
accessory Sec system protein Asp3; This protein is designated Asp3 because, along with SecY2, ...
 7-140 4.07e-66

accessory Sec system protein Asp3; This protein is designated Asp3 because, along with SecY2, SecA2, and other proteins it is part of the accessory Sec system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]


Pssm-ID: 163423  Cd Length: 135  Bit Score: 203.75  E-value: 4.07e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612661354    7 FKVTWNYISQTTFMYGSKVSFSN-GEVTFINPLMPSGLPIHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGS 85
Cdd:TIGR03711   1 YQIYWTDISETTYLYGTTVKFLSdNEVYFENPLMPSGETIHTWSSLTNYQAARTVPSLPLLKRGQTYKLSLNADASPEGS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 612661354   86 VYFIIIFYNKNGTKLSTEIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTI 140
Cdd:TIGR03711  81 VYLKITFFDRQGEEIGTEIEKDDSIIFIYPDEAYFYKISLISAGSESFTFHYLKI 135
Sec-ASP3 pfam15432
Accessory Sec secretory system ASP3; Sec-ASP3 is family of bacterial proteins involved in the ...
 19-142 7.66e-53

Accessory Sec secretory system ASP3; Sec-ASP3 is family of bacterial proteins involved in the Sec secretory system. The family forms part of the accessory SecA2/SecY2 system specifically required to export GspB, a serine-rich repeat cell-wall glycoprotein adhesin encoded upstream in the same operon.


Pssm-ID: 434713  Cd Length: 125  Bit Score: 169.38  E-value: 7.66e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612661354   19 FMYGSKVSFSN-GEVTFINPLMPSGLPIHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGSVYFIIIFYNKNG 97
Cdd:pfam15432   1 YLYGSKISYNKdGSVTFSNPLMPSGTVIHSWYSKTNYQSQRIEPQLPLLERGQSYHLTINADSVPEDSLILRIIFYDRQG 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 612661354   98 TKLSTEIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTITE 142
Cdd:pfam15432  81 EEIDFIILRDLSDYFTYPDKAYSYEIELINAGNQELTFHYLVISE 125
 
Name Accession Description Interval E-value
acc_sec_asp3 TIGR03711
accessory Sec system protein Asp3; This protein is designated Asp3 because, along with SecY2, ...
 7-140 4.07e-66

accessory Sec system protein Asp3; This protein is designated Asp3 because, along with SecY2, SecA2, and other proteins it is part of the accessory Sec system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]


Pssm-ID: 163423  Cd Length: 135  Bit Score: 203.75  E-value: 4.07e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612661354    7 FKVTWNYISQTTFMYGSKVSFSN-GEVTFINPLMPSGLPIHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGS 85
Cdd:TIGR03711   1 YQIYWTDISETTYLYGTTVKFLSdNEVYFENPLMPSGETIHTWSSLTNYQAARTVPSLPLLKRGQTYKLSLNADASPEGS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 612661354   86 VYFIIIFYNKNGTKLSTEIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTI 140
Cdd:TIGR03711  81 VYLKITFFDRQGEEIGTEIEKDDSIIFIYPDEAYFYKISLISAGSESFTFHYLKI 135
Sec-ASP3 pfam15432
Accessory Sec secretory system ASP3; Sec-ASP3 is family of bacterial proteins involved in the ...
 19-142 7.66e-53

Accessory Sec secretory system ASP3; Sec-ASP3 is family of bacterial proteins involved in the Sec secretory system. The family forms part of the accessory SecA2/SecY2 system specifically required to export GspB, a serine-rich repeat cell-wall glycoprotein adhesin encoded upstream in the same operon.


Pssm-ID: 434713  Cd Length: 125  Bit Score: 169.38  E-value: 7.66e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612661354   19 FMYGSKVSFSN-GEVTFINPLMPSGLPIHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGSVYFIIIFYNKNG 97
Cdd:pfam15432   1 YLYGSKISYNKdGSVTFSNPLMPSGTVIHSWYSKTNYQSQRIEPQLPLLERGQSYHLTINADSVPEDSLILRIIFYDRQG 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 612661354   98 TKLSTEIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTITE 142
Cdd:pfam15432  81 EEIDFIILRDLSDYFTYPDKAYSYEIELINAGNQELTFHYLVISE 125
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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