hypothetical protein W490_02095 [Staphylococcus aureus VET0191R]
Protein Classification
lysozyme family protein( domain architecture ID 63)
lysozyme family protein
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| Lyz-like super family | cl00222 | lysozyme-like domains; This family contains several members, including soluble lytic ... |
155-231 | 3.74e-25 | ||
lysozyme-like domains; This family contains several members, including soluble lytic transglycosylases (SLT), goose egg-white lysozymes (GEWL), hen egg-white lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, chitosanases, and pesticin. Typical members are involved in the hydrolysis of beta-1,4- linked polysaccharides. The actual alignment was detected with superfamily member pfam06737: Pssm-ID: 469668 [Multi-domain] Cd Length: 75 Bit Score: 94.02 E-value: 3.74e-25
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| Name | Accession | Description | Interval | E-value | ||
| Transglycosylas | pfam06737 | Transglycosylase-like domain; This family of proteins are very likely to act as ... |
155-231 | 3.74e-25 | ||
Transglycosylase-like domain; This family of proteins are very likely to act as transglycosylase enzymes related to pfam00062 and pfam01464. These other families are weakly matched by this family, and include the known active site residues. Pssm-ID: 399604 [Multi-domain] Cd Length: 75 Bit Score: 94.02 E-value: 3.74e-25
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| RPF | cd13925 | core lysozyme-like domain of resuscitation-promoting factor proteins; Resuscitation-promoting ... |
157-230 | 2.69e-18 | ||
core lysozyme-like domain of resuscitation-promoting factor proteins; Resuscitation-promoting factor (RPF) proteins, found in various (G+C)-rich Gram-positive bacteria, act to reactivate cultures from stationary phase. This protein shares elements of the structural core of lysozyme and related proteins. Furthermore, it shares a conserved active site glutamate which is required for activity, and has a polysaccharide binding cleft that corresponds to the peptidoglycan binding cleft of lysozyme. Muralytic activity of Rpf in Micrococcus luteus correlates with resuscitation, supporting a mechanism dependent on cleavage of peptidoglycan by RPF. Pssm-ID: 381607 [Multi-domain] Cd Length: 71 Bit Score: 75.88 E-value: 2.69e-18
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| COG4678 | COG4678 | Muramidase (phage lambda lysozyme) [Cell wall/membrane/envelope biogenesis, Mobilome: ... |
175-225 | 4.39e-06 | ||
Muramidase (phage lambda lysozyme) [Cell wall/membrane/envelope biogenesis, Mobilome: prophages, transposons]; Pssm-ID: 443714 Cd Length: 166 Bit Score: 45.30 E-value: 4.39e-06
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| Name | Accession | Description | Interval | E-value | ||
| Transglycosylas | pfam06737 | Transglycosylase-like domain; This family of proteins are very likely to act as ... |
155-231 | 3.74e-25 | ||
Transglycosylase-like domain; This family of proteins are very likely to act as transglycosylase enzymes related to pfam00062 and pfam01464. These other families are weakly matched by this family, and include the known active site residues. Pssm-ID: 399604 [Multi-domain] Cd Length: 75 Bit Score: 94.02 E-value: 3.74e-25
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| RPF | cd13925 | core lysozyme-like domain of resuscitation-promoting factor proteins; Resuscitation-promoting ... |
157-230 | 2.69e-18 | ||
core lysozyme-like domain of resuscitation-promoting factor proteins; Resuscitation-promoting factor (RPF) proteins, found in various (G+C)-rich Gram-positive bacteria, act to reactivate cultures from stationary phase. This protein shares elements of the structural core of lysozyme and related proteins. Furthermore, it shares a conserved active site glutamate which is required for activity, and has a polysaccharide binding cleft that corresponds to the peptidoglycan binding cleft of lysozyme. Muralytic activity of Rpf in Micrococcus luteus correlates with resuscitation, supporting a mechanism dependent on cleavage of peptidoglycan by RPF. Pssm-ID: 381607 [Multi-domain] Cd Length: 71 Bit Score: 75.88 E-value: 2.69e-18
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| COG4678 | COG4678 | Muramidase (phage lambda lysozyme) [Cell wall/membrane/envelope biogenesis, Mobilome: ... |
175-225 | 4.39e-06 | ||
Muramidase (phage lambda lysozyme) [Cell wall/membrane/envelope biogenesis, Mobilome: prophages, transposons]; Pssm-ID: 443714 Cd Length: 166 Bit Score: 45.30 E-value: 4.39e-06
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| lambda_lys-like | cd00736 | Bacteriophage lambda lysozyme and similar proteins; Lysozyme from bacteriophage lambda ... |
157-219 | 4.39e-06 | ||
Bacteriophage lambda lysozyme and similar proteins; Lysozyme from bacteriophage lambda hydrolyzes the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc), as do other lysozymes. However, unlike other lysozymes, bacteriophage lambda does not produce a reducing end upon cleavage of the peptidoglycan, but rather uses the 6-OH of the same MurNAc residue to produce a 1,6-anhydromuramic acid terminal residue and is therefore a lytic transglycosylase. An identical 1,6-anhydro bond is formed in bacterial peptidoglycans by the action of the lytic transglycosylases of E. coli, though they differ structurally. Pssm-ID: 381598 Cd Length: 141 Bit Score: 44.84 E-value: 4.39e-06
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