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Concise Results
Standard Results
Full Results
DHH subfamily 1 protein [Staphylococcus aureus M1365]
Protein Classification
DHH family phosphoesterase ( domain architecture ID 11467548 )
DHH family phosphoesterase such as Bacillus subtilis cyclic-di-AMP phosphodiesterase GdpP and Listeria monocytogenes cyclic-di-AMP phosphodiesterase PdeA
List of domain hits
Name
Accession
Description
Interval
E-value
GdpP
COG3887 Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction ...
1-654
0e+00
Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction mechanisms];
Pssm-ID: 443095 [Multi-domain]
Cd Length: 662
Bit Score: 942.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 1 M NRQST K KA L LIPFVIMIITAIV L MGVWFIF N SL I A L IASIV L VVMIIVS I ILF R QALMKMDS Y VDG LS AQISTTNNK A I 80
Cdd:COG3887 1 M KKKLK K RK L RPLLLVLLLLLLL L LIILLFY N WI I G L LGLLL L ILLLYYN I KAE R KRRRELEK Y IET LS YRVDKAGKE A L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 81 KH LPIGI IV LDE NDH IEW V N QFMTNHME - ANVISE S VNEV FP NI ---- LK QLDRVKSVE I EYNQYHFQ V R Y ------ S E N 149
Cdd:COG3887 81 LE LPIGI VL LDE DGE IEW Y N PYFSEIFG d EDLLGK S LEDI FP EL nldk LK EEEGEEPFT I TIGDRYYR V Y Y kkvkde E E D 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 150 DHC LYFFD I TE QVQTNEL YE NSK P I I ATL F L DNYDE I TQ N M NDTQ RS EI NS M VTR VISR WA T EY NI F F KRYSSD QFV A YL 229
Cdd:COG3887 161 LRL LYFFD V TE YEELKKE YE EER P V I GII F I DNYDE V TQ S M DESE RS LL NS E VTR KLND WA N EY GG F L KRYSSD RYL A VM 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 230 N Q KIL AD LEE S KF D IL SQL RE KSV G YRAQL TLSIG V G E G TEN L ID LGEL S QS G LDLALGRGGDQV AI K s INGN VRFYGGK 309
Cdd:COG3887 241 N E KIL EK LEE D KF S IL DEI RE ITS G NNIPV TLSIG I G Y G GDS L AE LGEL A QS A LDLALGRGGDQV VV K - DGDK VRFYGGK 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 310 T DPM EKRTRVRARVI S HAL KDILA E G D K V I IMGHK R PD L D A IGAAIGV S R F A M M NNL EAYIVL N et DID P TLR R V M N EI D 389
Cdd:COG3887 320 T NAV EKRTRVRARVI A HAL RELIK E S D N V F IMGHK N PD M D S IGAAIGV L R I A K M LGK EAYIVL D -- EVN P SID R L M E EI K 397
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 390 KKS E LRER FI TSDD A WDMM T SK T TV V I VDTH K P E LV LDENV L N KA NRK VVIDHHRRGE S FI S NP L L I Y M EPYASST A ELV 469
Cdd:COG3887 398 EEE E YEDL FI SPEE A LELI T KN T LL V V VDTH R P S LV ESPEL L E KA EKV VVIDHHRRGE E FI E NP V L V Y I EPYASST S ELV 477
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 470 TELL E YQP TEQR L TR LE S T VMY AGI I VDT R NFTLRTG S RTF D AASYLR AH GADTIL TQHFL K D D V DTYI N R S ELI RTVKV 549
Cdd:COG3887 478 TELL Q YQP DKIK L SK LE A T ALL AGI V VDT K NFTLRTG V RTF E AASYLR RN GADTIL VKQLF K E D L DTYI A R A ELI SSAEI 557
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 550 EDN GIAIA H G SD D KI Y HP V TV AQAADELL SLE GIEAS Y V VAR R E D NL IGISARSLG SV NVQ LT ME A LGGGGHLTNA AT QL 629
Cdd:COG3887 558 YRD GIAIA V G PE D IE Y SQ V IA AQAADELL NIK GIEAS F V LTK R S D GK IGISARSLG EI NVQ VI ME K LGGGGHLTNA GA QL 637
650 660
....*....|....*....|....*
gi 581841890 630 K G VT V EEA IA QL QQ AI T E Q L SRS E D 654
Cdd:COG3887 638 K D VT I EEA KE QL KE AI D E Y L EEG E E 662
Name
Accession
Description
Interval
E-value
GdpP
COG3887 Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction ...
1-654
0e+00
Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction mechanisms];
Pssm-ID: 443095 [Multi-domain]
Cd Length: 662
Bit Score: 942.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 1 M NRQST K KA L LIPFVIMIITAIV L MGVWFIF N SL I A L IASIV L VVMIIVS I ILF R QALMKMDS Y VDG LS AQISTTNNK A I 80
Cdd:COG3887 1 M KKKLK K RK L RPLLLVLLLLLLL L LIILLFY N WI I G L LGLLL L ILLLYYN I KAE R KRRRELEK Y IET LS YRVDKAGKE A L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 81 KH LPIGI IV LDE NDH IEW V N QFMTNHME - ANVISE S VNEV FP NI ---- LK QLDRVKSVE I EYNQYHFQ V R Y ------ S E N 149
Cdd:COG3887 81 LE LPIGI VL LDE DGE IEW Y N PYFSEIFG d EDLLGK S LEDI FP EL nldk LK EEEGEEPFT I TIGDRYYR V Y Y kkvkde E E D 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 150 DHC LYFFD I TE QVQTNEL YE NSK P I I ATL F L DNYDE I TQ N M NDTQ RS EI NS M VTR VISR WA T EY NI F F KRYSSD QFV A YL 229
Cdd:COG3887 161 LRL LYFFD V TE YEELKKE YE EER P V I GII F I DNYDE V TQ S M DESE RS LL NS E VTR KLND WA N EY GG F L KRYSSD RYL A VM 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 230 N Q KIL AD LEE S KF D IL SQL RE KSV G YRAQL TLSIG V G E G TEN L ID LGEL S QS G LDLALGRGGDQV AI K s INGN VRFYGGK 309
Cdd:COG3887 241 N E KIL EK LEE D KF S IL DEI RE ITS G NNIPV TLSIG I G Y G GDS L AE LGEL A QS A LDLALGRGGDQV VV K - DGDK VRFYGGK 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 310 T DPM EKRTRVRARVI S HAL KDILA E G D K V I IMGHK R PD L D A IGAAIGV S R F A M M NNL EAYIVL N et DID P TLR R V M N EI D 389
Cdd:COG3887 320 T NAV EKRTRVRARVI A HAL RELIK E S D N V F IMGHK N PD M D S IGAAIGV L R I A K M LGK EAYIVL D -- EVN P SID R L M E EI K 397
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 390 KKS E LRER FI TSDD A WDMM T SK T TV V I VDTH K P E LV LDENV L N KA NRK VVIDHHRRGE S FI S NP L L I Y M EPYASST A ELV 469
Cdd:COG3887 398 EEE E YEDL FI SPEE A LELI T KN T LL V V VDTH R P S LV ESPEL L E KA EKV VVIDHHRRGE E FI E NP V L V Y I EPYASST S ELV 477
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 470 TELL E YQP TEQR L TR LE S T VMY AGI I VDT R NFTLRTG S RTF D AASYLR AH GADTIL TQHFL K D D V DTYI N R S ELI RTVKV 549
Cdd:COG3887 478 TELL Q YQP DKIK L SK LE A T ALL AGI V VDT K NFTLRTG V RTF E AASYLR RN GADTIL VKQLF K E D L DTYI A R A ELI SSAEI 557
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 550 EDN GIAIA H G SD D KI Y HP V TV AQAADELL SLE GIEAS Y V VAR R E D NL IGISARSLG SV NVQ LT ME A LGGGGHLTNA AT QL 629
Cdd:COG3887 558 YRD GIAIA V G PE D IE Y SQ V IA AQAADELL NIK GIEAS F V LTK R S D GK IGISARSLG EI NVQ VI ME K LGGGGHLTNA GA QL 637
650 660
....*....|....*....|....*
gi 581841890 630 K G VT V EEA IA QL QQ AI T E Q L SRS E D 654
Cdd:COG3887 638 K D VT I EEA KE QL KE AI D E Y L EEG E E 662
PRK14538
PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
27-643
1.54e-118
putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
Pssm-ID: 173004 [Multi-domain]
Cd Length: 838
Bit Score: 373.39
E-value: 1.54e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 27 VW F I FN s LIAL I ASIV L VVMIIVS I ILFR Q A -- L MKMD S YVDG LS AQI S TTNNKAIKH LPIGI IVL D ENDH - I E W V N QFM 103
Cdd:PRK14538 54 IF F T FN - FLGK I ILAI L IISFLLN I KKNA Q I kr L QNKL S LWSK LS FHV S QIGEEVLNE LPIGI VLI D ISSK e I Q W L N PYA 132
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 104 TNHMEANV I SESVNEVFPNILKQ L --- D RVKSVE I EYNQYH F QVR Y SENDHCL Y F F DI TE QV Q TNE L YENSKPII A TLFL 180
Cdd:PRK14538 133 NFILKNPE I NTPLAQINESMAQL L lts D KIPKTI I TLKNQK F ECF Y KKDLNVF Y L F NA TE KE Q IKH L FLQKTLAL A MITF 212
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 181 DN YD E ITQNMNDTQR S E I NSMVTRVI S RWATE Y NIFF K RYSS D Q F VAYL N QKI L ADLE E S KF D IL SQL R EK S VG Y RAQL T 260
Cdd:PRK14538 213 DN LE E SLIRYDLSEQ S Q I QGEYLSAL S DFIEP Y EGYL K QLID D R F LLLI N RQN L DKMI E N KF S IL DTI R NI S HK Y QLKV T 292
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 261 LS I G VGEGTENLID L GEL SQ SGLD LA LG RGGDQ VAIKSI N GNVRFY G G K TDPME K RTR V R ARV ISHA L K DIL AEGDKVI I 340
Cdd:PRK14538 293 LS M G IACWNLSYDK L ATY SQ NAIE LA QK RGGDQ AVVNIE N EKIKYF G A K IASLS K QSK V N ARV NAQN L V DIL KKNPHCF I 372
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 341 MGH KRP DLD AI G AA I GVSRF A MM -- NNLEA YI V L N E TDI D PT L RR V MNE - I DKKSELRERF IT SDD A WD M MTSKTTVVIV 417
Cdd:PRK14538 373 MGH NHT DLD SL G SM I AFYKI A LT ih PDNNN YI I L D E EKL D KS L TP V YHQ l I KQEHKVTLNI IT TQQ A SK M IKKNDLIAVL 452
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 418 DT HKPEL V LDENV L NKA N RKV VIDHHR RG E SF I SN p LLI Y MEPY ASST A EL VT EL LEYQPT E QRL T RL E STV MYAGI IV D 497
Cdd:PRK14538 453 DT QTKDI V NSPEL L SLT N NII VIDHHR AT E EI I PS - IFS Y VDSS ASST V EL LV EL MGFLEK E IHI T AF E ASI MYAGI LI D 531
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 498 T RN F TL RT G SRTF DA AS Y L RAH GAD T I LTQHF L KD D V D TYINRSE LI RTVKVEDNGI AI A hg SDDK IY HPVT - V AQ A A DE 576
Cdd:PRK14538 532 T NA F IY RT S SRTF EV AS K L KDL GAD A I EVKSW L RK D F D KVLEINK LI SKMEIFMDRF AI I -- KSEE IY DNRS f L AQ V A ES 609
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 581841890 577 L L SLEGIE A SYVV A RRE DN L I G ISARS LGSV NVQ LT ME ALG GGGHL TN AATQ L KG VTVEEAIAQ L QQ 643
Cdd:PRK14538 610 V L NIQNVD A AFMI A KIS DN T I A ISARS YNEI NVQ TI ME QME GGGHL NS AATQ I KG TNIKTVTQT L KH 676
DHH
pfam01368 DHH family; It is predicted that this family of proteins all perform a phosphoesterase ...
337-494
1.17e-24
DHH family; It is predicted that this family of proteins all perform a phosphoesterase function. It included the single stranded DNA exonuclease RecJ.
Pssm-ID: 460177 [Multi-domain]
Cd Length: 145
Bit Score: 99.95
E-value: 1.17e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 337 K VI I M GH KR PD L D A IG A A I G VS R F ammnn L EAY ivlnetd ID P TLRRVM - NEIDK kselr ERF I TSDDAWDMMTSK T TVV 415
Cdd:pfam01368 1 K IV I Y GH YN PD G D G IG S A L G LY R Y ----- L KEL ------- VG P DVEYYI p DRLEE ----- GYG I NPEAIEELIDFD T LLI 63
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 416 I VD THKPELVLD E NVLNKANRKV VIDHH r RGES F I -- SNPLLIYM EP Y ASST A E L V TE LL E Y QPT E -- QRLTRLESTVMY 491
Cdd:pfam01368 64 T VD CGIKSVEGI E LAKELGIDVI VIDHH - LPND F L pd ADAIINPR EP P ASST S E V V FK LL Q Y AYG E eg KEIDKELADLLL 142
...
gi 581841890 492 A GI 494
Cdd:pfam01368 143 L GI 145
GGDEF
smart00267 diguanylate cyclase; Diguanylate cyclase, present in a variety of bacteria.
154-297
6.98e-11
diguanylate cyclase; Diguanylate cyclase, present in a variety of bacteria.
Pssm-ID: 128563 [Multi-domain]
Cd Length: 163
Bit Score: 61.11
E-value: 6.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 154 YF FDIT EQ VQTNELYEN S KPIIATLF LDN YDE I TQNMNDTQRS E INSM V TRVI S RWATEYNIFF k R YSS D Q F VAY L NQKI 233
Cdd:smart00267 16 YF EEEL EQ ELQRAQRQG S PFALLLID LDN FKD I NDTYGHAVGD E LLQE V AQRL S SCLRPGDLLA - R LGG D E F ALL L PETS 94
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 581841890 234 L ADLEESKFD IL S QLRE KSV -- G YRAQ LT L SIGV G --- EGT E NLI DL GELSQSG L DL A LGR G GD QVA IK 297
Cdd:smart00267 95 L EEAIALAER IL Q QLRE PII ih G IPLY LT I SIGV A ayp NPG E DAE DL LKRADTA L YQ A KKA G RN QVA VY 163
Name
Accession
Description
Interval
E-value
GdpP
COG3887 Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction ...
1-654
0e+00
Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction mechanisms];
Pssm-ID: 443095 [Multi-domain]
Cd Length: 662
Bit Score: 942.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 1 M NRQST K KA L LIPFVIMIITAIV L MGVWFIF N SL I A L IASIV L VVMIIVS I ILF R QALMKMDS Y VDG LS AQISTTNNK A I 80
Cdd:COG3887 1 M KKKLK K RK L RPLLLVLLLLLLL L LIILLFY N WI I G L LGLLL L ILLLYYN I KAE R KRRRELEK Y IET LS YRVDKAGKE A L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 81 KH LPIGI IV LDE NDH IEW V N QFMTNHME - ANVISE S VNEV FP NI ---- LK QLDRVKSVE I EYNQYHFQ V R Y ------ S E N 149
Cdd:COG3887 81 LE LPIGI VL LDE DGE IEW Y N PYFSEIFG d EDLLGK S LEDI FP EL nldk LK EEEGEEPFT I TIGDRYYR V Y Y kkvkde E E D 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 150 DHC LYFFD I TE QVQTNEL YE NSK P I I ATL F L DNYDE I TQ N M NDTQ RS EI NS M VTR VISR WA T EY NI F F KRYSSD QFV A YL 229
Cdd:COG3887 161 LRL LYFFD V TE YEELKKE YE EER P V I GII F I DNYDE V TQ S M DESE RS LL NS E VTR KLND WA N EY GG F L KRYSSD RYL A VM 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 230 N Q KIL AD LEE S KF D IL SQL RE KSV G YRAQL TLSIG V G E G TEN L ID LGEL S QS G LDLALGRGGDQV AI K s INGN VRFYGGK 309
Cdd:COG3887 241 N E KIL EK LEE D KF S IL DEI RE ITS G NNIPV TLSIG I G Y G GDS L AE LGEL A QS A LDLALGRGGDQV VV K - DGDK VRFYGGK 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 310 T DPM EKRTRVRARVI S HAL KDILA E G D K V I IMGHK R PD L D A IGAAIGV S R F A M M NNL EAYIVL N et DID P TLR R V M N EI D 389
Cdd:COG3887 320 T NAV EKRTRVRARVI A HAL RELIK E S D N V F IMGHK N PD M D S IGAAIGV L R I A K M LGK EAYIVL D -- EVN P SID R L M E EI K 397
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 390 KKS E LRER FI TSDD A WDMM T SK T TV V I VDTH K P E LV LDENV L N KA NRK VVIDHHRRGE S FI S NP L L I Y M EPYASST A ELV 469
Cdd:COG3887 398 EEE E YEDL FI SPEE A LELI T KN T LL V V VDTH R P S LV ESPEL L E KA EKV VVIDHHRRGE E FI E NP V L V Y I EPYASST S ELV 477
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 470 TELL E YQP TEQR L TR LE S T VMY AGI I VDT R NFTLRTG S RTF D AASYLR AH GADTIL TQHFL K D D V DTYI N R S ELI RTVKV 549
Cdd:COG3887 478 TELL Q YQP DKIK L SK LE A T ALL AGI V VDT K NFTLRTG V RTF E AASYLR RN GADTIL VKQLF K E D L DTYI A R A ELI SSAEI 557
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 550 EDN GIAIA H G SD D KI Y HP V TV AQAADELL SLE GIEAS Y V VAR R E D NL IGISARSLG SV NVQ LT ME A LGGGGHLTNA AT QL 629
Cdd:COG3887 558 YRD GIAIA V G PE D IE Y SQ V IA AQAADELL NIK GIEAS F V LTK R S D GK IGISARSLG EI NVQ VI ME K LGGGGHLTNA GA QL 637
650 660
....*....|....*....|....*
gi 581841890 630 K G VT V EEA IA QL QQ AI T E Q L SRS E D 654
Cdd:COG3887 638 K D VT I EEA KE QL KE AI D E Y L EEG E E 662
PRK14538
PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
27-643
1.54e-118
putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
Pssm-ID: 173004 [Multi-domain]
Cd Length: 838
Bit Score: 373.39
E-value: 1.54e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 27 VW F I FN s LIAL I ASIV L VVMIIVS I ILFR Q A -- L MKMD S YVDG LS AQI S TTNNKAIKH LPIGI IVL D ENDH - I E W V N QFM 103
Cdd:PRK14538 54 IF F T FN - FLGK I ILAI L IISFLLN I KKNA Q I kr L QNKL S LWSK LS FHV S QIGEEVLNE LPIGI VLI D ISSK e I Q W L N PYA 132
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 104 TNHMEANV I SESVNEVFPNILKQ L --- D RVKSVE I EYNQYH F QVR Y SENDHCL Y F F DI TE QV Q TNE L YENSKPII A TLFL 180
Cdd:PRK14538 133 NFILKNPE I NTPLAQINESMAQL L lts D KIPKTI I TLKNQK F ECF Y KKDLNVF Y L F NA TE KE Q IKH L FLQKTLAL A MITF 212
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 181 DN YD E ITQNMNDTQR S E I NSMVTRVI S RWATE Y NIFF K RYSS D Q F VAYL N QKI L ADLE E S KF D IL SQL R EK S VG Y RAQL T 260
Cdd:PRK14538 213 DN LE E SLIRYDLSEQ S Q I QGEYLSAL S DFIEP Y EGYL K QLID D R F LLLI N RQN L DKMI E N KF S IL DTI R NI S HK Y QLKV T 292
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 261 LS I G VGEGTENLID L GEL SQ SGLD LA LG RGGDQ VAIKSI N GNVRFY G G K TDPME K RTR V R ARV ISHA L K DIL AEGDKVI I 340
Cdd:PRK14538 293 LS M G IACWNLSYDK L ATY SQ NAIE LA QK RGGDQ AVVNIE N EKIKYF G A K IASLS K QSK V N ARV NAQN L V DIL KKNPHCF I 372
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 341 MGH KRP DLD AI G AA I GVSRF A MM -- NNLEA YI V L N E TDI D PT L RR V MNE - I DKKSELRERF IT SDD A WD M MTSKTTVVIV 417
Cdd:PRK14538 373 MGH NHT DLD SL G SM I AFYKI A LT ih PDNNN YI I L D E EKL D KS L TP V YHQ l I KQEHKVTLNI IT TQQ A SK M IKKNDLIAVL 452
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 418 DT HKPEL V LDENV L NKA N RKV VIDHHR RG E SF I SN p LLI Y MEPY ASST A EL VT EL LEYQPT E QRL T RL E STV MYAGI IV D 497
Cdd:PRK14538 453 DT QTKDI V NSPEL L SLT N NII VIDHHR AT E EI I PS - IFS Y VDSS ASST V EL LV EL MGFLEK E IHI T AF E ASI MYAGI LI D 531
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 498 T RN F TL RT G SRTF DA AS Y L RAH GAD T I LTQHF L KD D V D TYINRSE LI RTVKVEDNGI AI A hg SDDK IY HPVT - V AQ A A DE 576
Cdd:PRK14538 532 T NA F IY RT S SRTF EV AS K L KDL GAD A I EVKSW L RK D F D KVLEINK LI SKMEIFMDRF AI I -- KSEE IY DNRS f L AQ V A ES 609
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 581841890 577 L L SLEGIE A SYVV A RRE DN L I G ISARS LGSV NVQ LT ME ALG GGGHL TN AATQ L KG VTVEEAIAQ L QQ 643
Cdd:PRK14538 610 V L NIQNVD A AFMI A KIS DN T I A ISARS YNEI NVQ TI ME QME GGGHL NS AATQ I KG TNIKTVTQT L KH 676
NrnA
COG0618 nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs [Nucleotide transport and ...
326-645
4.63e-57
nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs [Nucleotide transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 440383 [Multi-domain]
Cd Length: 312
Bit Score: 195.41
E-value: 4.63e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 326 HA L KDI L AEG D KVI I MG H KR PD L DA I G A A IGVSRFAMMNNL E AY IV l NETD I DPT L R -- RVMN EI DKKSELRERF itsdd 403
Cdd:COG0618 1 EE L AEL L KKA D RIL I LT H VN PD G DA L G S A LALALLLRALGK E VT IV - YPGE I PHE L A fl PGAD EI VRLEDVDLEY ----- 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 404 awdmmtsk TT V VI VDT HK P E - LVLDENV L N KA NRKV VIDHH RRGES F IS npl LIYME P Y A SS T A E LVT ELL EYQPT E qr L 482
Cdd:COG0618 75 -------- DL V IV VDT SS P D r IGDLAEL L E KA KPVI VIDHH PSNDD F GD --- FNDVD P D A GA T S E IIY ELL KELGI E -- I 141
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 483 TRLES T VM Y A GI IV DT RN F TLR - T GS R T F D AA SY L RAH GAD tiltqhfl K D DVDTYINR S ---------- ELIRTVK V ED 551
Cdd:COG0618 142 DPEIA T AL Y T GI VT DT GS F RYS n T TP R D F R AA AE L LEK GAD -------- L D LIARILYP S lsleqlkllg RALENLE V LE 213
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 552 N G - I A IAH - GSD D KIYHPV T V --- AQAA D E LLS L EG I E ASY V VARR ED NL I GI S A RS L G S V N V QLTMEAL GGGGH LTN A A 626
Cdd:COG0618 214 D G k V A YSY l TKE D LEEFGA T P ddt EGLV D Y LLS I EG V E VAV V FGEV ED GE I KV S L RS K G R V D V GEIAREF GGGGH ARA A G 293
330
....*....|....*....
gi 581841890 627 TQLK G VTV EE AIAQ L QQ A I 645
Cdd:COG0618 294 ATIP G LDL EE VVEK L LE A L 312
DHH
pfam01368 DHH family; It is predicted that this family of proteins all perform a phosphoesterase ...
337-494
1.17e-24
DHH family; It is predicted that this family of proteins all perform a phosphoesterase function. It included the single stranded DNA exonuclease RecJ.
Pssm-ID: 460177 [Multi-domain]
Cd Length: 145
Bit Score: 99.95
E-value: 1.17e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 337 K VI I M GH KR PD L D A IG A A I G VS R F ammnn L EAY ivlnetd ID P TLRRVM - NEIDK kselr ERF I TSDDAWDMMTSK T TVV 415
Cdd:pfam01368 1 K IV I Y GH YN PD G D G IG S A L G LY R Y ----- L KEL ------- VG P DVEYYI p DRLEE ----- GYG I NPEAIEELIDFD T LLI 63
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 416 I VD THKPELVLD E NVLNKANRKV VIDHH r RGES F I -- SNPLLIYM EP Y ASST A E L V TE LL E Y QPT E -- QRLTRLESTVMY 491
Cdd:pfam01368 64 T VD CGIKSVEGI E LAKELGIDVI VIDHH - LPND F L pd ADAIINPR EP P ASST S E V V FK LL Q Y AYG E eg KEIDKELADLLL 142
...
gi 581841890 492 A GI 494
Cdd:pfam01368 143 L GI 145
PPX1
COG1227 Inorganic pyrophosphatase/exopolyphosphatase [Energy production and conversion];
336-501
1.46e-11
Inorganic pyrophosphatase/exopolyphosphatase [Energy production and conversion];
Pssm-ID: 440840 [Multi-domain]
Cd Length: 307
Bit Score: 65.95
E-value: 1.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 336 D K VIIM GHK R PD L D A I GA AI GVSRF am M N -------------- N L E AYI VL NETDID - P T L rrvmneidkkselrerf I T 400
Cdd:COG1227 2 M K ILVF GHK N PD T D S I CS AI AYAYL -- K N qlgedaeavrlgep N P E TAF VL DYFGVE a P E L ----------------- I E 62
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 401 SDD A wdmmts KTT V VI VD THKP - EL V LD env LNK A NRKVV IDHHR R G ESFISN PL L I YM EP YA s S TA ELVTE L le Y QPTE 479
Cdd:COG1227 63 DVA A ------ GKK V IL VD HNEL a QS V DG --- IDE A EILEI IDHHR I G DFETAA PL Y I RI EP VG - C TA TIIAK L -- Y KENG 130
170 180
....*....|....*....|..
gi 581841890 480 QRLTRLESTV M YAG I IV DT RN F 501
Cdd:COG1227 131 VEIPKEIAGL M LSA I LS DT LL F 152
GGDEF
smart00267 diguanylate cyclase; Diguanylate cyclase, present in a variety of bacteria.
154-297
6.98e-11
diguanylate cyclase; Diguanylate cyclase, present in a variety of bacteria.
Pssm-ID: 128563 [Multi-domain]
Cd Length: 163
Bit Score: 61.11
E-value: 6.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 154 YF FDIT EQ VQTNELYEN S KPIIATLF LDN YDE I TQNMNDTQRS E INSM V TRVI S RWATEYNIFF k R YSS D Q F VAY L NQKI 233
Cdd:smart00267 16 YF EEEL EQ ELQRAQRQG S PFALLLID LDN FKD I NDTYGHAVGD E LLQE V AQRL S SCLRPGDLLA - R LGG D E F ALL L PETS 94
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 581841890 234 L ADLEESKFD IL S QLRE KSV -- G YRAQ LT L SIGV G --- EGT E NLI DL GELSQSG L DL A LGR G GD QVA IK 297
Cdd:smart00267 95 L EEAIALAER IL Q QLRE PII ih G IPLY LT I SIGV A ayp NPG E DAE DL LKRADTA L YQ A KKA G RN QVA VY 163
PRK05427
PRK05427 putative manganese-dependent inorganic pyrophosphatase; Provisional
336-501
1.32e-07
putative manganese-dependent inorganic pyrophosphatase; Provisional
Pssm-ID: 235458 [Multi-domain]
Cd Length: 308
Bit Score: 53.68
E-value: 1.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 336 D K VIIM GHK R PD L D A I GA AI GVSRFAMMNN L E A YI V L netdidptlrrv MN E IDKKSE -- L RE ------ RF ITS D dawdm 407
Cdd:PRK05427 2 M K ILVF GHK N PD T D S I CS AI AYAYLKKALG L D A EA V R ------------ LG E PNPETA fv L DY fgveap EL ITS V ----- 64
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 408 m TSKTT V VI VD THKPELVL D E nv LNK A NRKV V I DHHR R G ESFI SNPL LIYM EP YA s S TA ELVTELLEYQPT E qr LTRLES 487
Cdd:PRK05427 65 - AGEVQ V IL VD HNEFQQSP D D -- IDE A TVVG V V DHHR L G NFET SNPL YYRI EP VG - C TA TILYKMFKENGV E -- IPKEIA 138
170
....*....|....
gi 581841890 488 TV M YAG I IV DT RN F 501
Cdd:PRK05427 139 GL M LSA I LS DT LL F 152
DHHA1
pfam02272 DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called ...
516-645
3.77e-06
DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called DHHA1 for DHH associated domain. This domain is diagnostic of DHH subfamily 1 members. This domains is also found in alanyl tRNA synthetase, suggesting that this domain may have an RNA binding function. The domain is about 60 residues long and contains a conserved GG motif.
Pssm-ID: 396724 [Multi-domain]
Cd Length: 139
Bit Score: 47.05
E-value: 3.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 516 L RAHGADTILTQHF L -- KDDVDTYINRS EL IRTVK v E D NG IAIAHGSDDKIYHPVTVAQ AAD E L LSLE G IEASYV VA RRE 593
Cdd:pfam02272 1 L ESLNEELKELEKE L ee LKEALALLKAK EL LEKAE - E I NG VKVLVAEVGEGWDAGALGI AAD R L KKKL G DPVIVL VA KED 79
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 594 DNLIGI SARS LGS -- V NVQLTMEAL ------ GGGGH LTN A ATQLKGVTVE EA IAQ L QQ AI 645
Cdd:pfam02272 80 GDKVKV SARS SKD kg V DAGELLKEV aailgg GGGGH DLA A GAGIDAEKLD EA LEL L EE AI 139
NtrY
COG5000 Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism ...
29-167
6.68e-04
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms];
Pssm-ID: 444024 [Multi-domain]
Cd Length: 422
Bit Score: 42.64
E-value: 6.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 29 FI F NS L IA LIA SIV L VVMIIVSII L F R ------ QA L MK - MDSYVD G - LS AQIST T NNKA I -------------------- 80
Cdd:COG5000 5 IL F LL L LL LIA LLL L LLALWLALL L A R rltrpl RR L AE a TRAVAA G d LS VRLPV T GDDE I gelarafnrmtdqlkeqree 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581841890 81 ------------ KH LP I G I IVLD ENDH I EWV N QF --- MTNHMEANV I SESVN E VF P N ------ ILKQ L D R VKSV EIE YN - 138
Cdd:COG5000 85 leerrryletil EN LP A G V IVLD ADGR I TLA N PA aer LLGIPLEEL I GKPLE E LL P E ldlael LREA L E R GWQE EIE LT r 164
170 180 190
....*....|....*....|....*....|....
gi 581841890 139 -- QYHFQ VR Y S --- ENDHCLY F F DITE QVQTNE L 167
Cdd:COG5000 165 dg RRTLL VR A S plr DDGYVIV F D DITE LLRAER L 198
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
