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Conserved domains on  [gi|581493600|gb|EVP02471|]
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phage protein [Staphylococcus aureus M1094]

Protein Classification

DUF1270 domain-containing protein( domain architecture ID 10536442)

DUF1270 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1270 pfam06900
Protein of unknown function (DUF1270); This family consists of several hypothetical ...
 1-53 2.14e-13

Protein of unknown function (DUF1270); This family consists of several hypothetical Staphylococcus aureus and phage proteins of 53 residues in length. The function of this family is unknown.


:

Pssm-ID: 284349  Cd Length: 53  Bit Score: 57.32  E-value: 2.14e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 581493600   1 MSNIYKSYLVAVLCFTVLAIVLMPLLYFTTAWSIAGFASIATFIFYKEYFYEE 53
Cdd:pfam06900  1 MSDIYKSYLLAVLCFTVLAIVLMPFLYFTTAWSIAGFASIATFIFYKEYFYEE 53
 
Name Accession Description Interval E-value
DUF1270 pfam06900
Protein of unknown function (DUF1270); This family consists of several hypothetical ...
 1-53 2.14e-13

Protein of unknown function (DUF1270); This family consists of several hypothetical Staphylococcus aureus and phage proteins of 53 residues in length. The function of this family is unknown.


Pssm-ID: 284349  Cd Length: 53  Bit Score: 57.32  E-value: 2.14e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 581493600   1 MSNIYKSYLVAVLCFTVLAIVLMPLLYFTTAWSIAGFASIATFIFYKEYFYEE 53
Cdd:pfam06900  1 MSDIYKSYLLAVLCFTVLAIVLMPFLYFTTAWSIAGFASIATFIFYKEYFYEE 53
 
Name Accession Description Interval E-value
DUF1270 pfam06900
Protein of unknown function (DUF1270); This family consists of several hypothetical ...
 1-53 2.14e-13

Protein of unknown function (DUF1270); This family consists of several hypothetical Staphylococcus aureus and phage proteins of 53 residues in length. The function of this family is unknown.


Pssm-ID: 284349  Cd Length: 53  Bit Score: 57.32  E-value: 2.14e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 581493600   1 MSNIYKSYLVAVLCFTVLAIVLMPLLYFTTAWSIAGFASIATFIFYKEYFYEE 53
Cdd:pfam06900  1 MSDIYKSYLLAVLCFTVLAIVLMPFLYFTTAWSIAGFASIATFIFYKEYFYEE 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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