NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|581074247|gb|EVK90916|]
View 

lysine-specific permease [Staphylococcus aureus M0824]

Protein Classification

amino acid permease( domain architecture ID 11435488)

amino acid permease facilitates the transport of amino acids; similar to Aspergillus nidulans proline-specific permease which is required for high-affinity proline transport

Gene Ontology:  GO:0016020|GO:0015171|GO:0003333

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
5-489 0e+00

Amino acid permease [Amino acid transport and metabolism];


:

Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 688.83  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   5 QNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTY 84
Cdd:COG0833    3 GSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTY 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  85 ATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIK 164
Cdd:COG0833   83 ATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFP--DVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 165 VITVIVFIAIGLLTIVGIMGGHVVGFEIFNKGEGPIlggnlGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVP 244
Cdd:COG0833  161 VITVIAFIIVGLLMIFGIIGGHAPGFSNFTTGDGPF-----PGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIP 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 245 KAIKQVFWRILLFYILAIFVIGMLIPYDSSalmggsdNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYAST 324
Cdd:COG0833  236 KAIRQVFWRILLFYILAIFVIAALIPYTDA-------GVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYAST 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 325 RMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKG-AYEYIVAASGLTGFIAWVGIAVSHYRFRRAF 403
Cdd:COG0833  309 RMLWSLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGtVYLWLLSISGLTGFIAWLGIAISHYRFRRAY 388
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 404 DKQNYDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQdvdfiktgDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIPLEQ 483
Cdd:COG0833  389 VAQGGDLEDLKYKAPLFPFGPIFAFILCLIVIIGQ--------AFDPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEE 460

                 ....*.
gi 581074247 484 VDLRQD 489
Cdd:COG0833  461 MDLSPE 466
 
Name Accession Description Interval E-value
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
5-489 0e+00

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 688.83  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   5 QNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTY 84
Cdd:COG0833    3 GSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTY 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  85 ATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIK 164
Cdd:COG0833   83 ATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFP--DVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 165 VITVIVFIAIGLLTIVGIMGGHVVGFEIFNKGEGPIlggnlGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVP 244
Cdd:COG0833  161 VITVIAFIIVGLLMIFGIIGGHAPGFSNFTTGDGPF-----PGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIP 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 245 KAIKQVFWRILLFYILAIFVIGMLIPYDSSalmggsdNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYAST 324
Cdd:COG0833  236 KAIRQVFWRILLFYILAIFVIAALIPYTDA-------GVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYAST 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 325 RMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKG-AYEYIVAASGLTGFIAWVGIAVSHYRFRRAF 403
Cdd:COG0833  309 RMLWSLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGtVYLWLLSISGLTGFIAWLGIAISHYRFRRAY 388
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 404 DKQNYDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQdvdfiktgDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIPLEQ 483
Cdd:COG0833  389 VAQGGDLEDLKYKAPLFPFGPIFAFILCLIVIIGQ--------AFDPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEE 460

                 ....*.
gi 581074247 484 VDLRQD 489
Cdd:COG0833  461 MDLSPE 466
PRK10836 PRK10836
lysine transporter; Provisional
12-479 3.30e-175

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 501.66  E-value: 3.30e-175
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  12 VKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDP 91
Cdd:PRK10836  13 LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEE 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  92 SLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVF 171
Cdd:PRK10836  93 GFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFP--DTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVF 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 172 IAIGLLTIVGIM-GGHVVGFEIFNKGEGPIlggnlGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVPKAIKQV 250
Cdd:PRK10836 171 IIVGVLMIIGIFkGAEPAGWSNWTIGDAPF-----AGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQV 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 251 FWRILLFYILAIFVIGMLIPY-DSSALMGGSDNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLYS 329
Cdd:PRK10836 246 FWRILLFYVFAILIISLIIPYtDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYT 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 330 MSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFvLQSL--TKGAYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQN 407
Cdd:PRK10836 326 LACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCF-LTSMfgNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQG 404
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 581074247 408 YDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKI 479
Cdd:PRK10836 405 HDLNDLPYRSGFFPLGPIFAFVLCLIITLGQNYEAFLKDTIDWGGVAATYIGIPLFLIIWFGYKLIKGTHFV 476
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
13-486 3.43e-145

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 424.77  E-value: 3.43e-145
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   13 KRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPV-SGSFSTYATRFVDP 91
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVvSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   92 SLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVF 171
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTD--KVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGF 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  172 IAIGLLTIVGIMGGH-VVGFEIFNKgEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVPKAIKQV 250
Cdd:TIGR00913 159 IILSIILNCGGGPNHgYIGFRYWHD-PGAFAGGTIGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRT 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  251 FWRILLFYILAIFVIGMLIPYDSSALMGGSDNVAT--SPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLY 328
Cdd:TIGR00913 238 FWRILVFYILTLFLIGFLVPYNDPRLLSSSSSSDSaaSPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLY 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  329 SMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKG-AYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQN 407
Cdd:TIGR00913 318 ALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAeVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQG 397
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  408 YDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKK-IPLEQVDL 486
Cdd:TIGR00913 398 RSLDELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPVKFSAKSFFEAYLSLPIFIALYIGHKVYKRDKLiIKLDDIDL 477
AA_permease pfam00324
Amino acid permease;
20-478 3.00e-119

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 358.17  E-value: 3.00e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   20 HISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGW 99
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  100 NYWFNWVVTVAADITIAAQVIQYWTPLQGIP-AWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVFIAIGLLT 178
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWELVPDIPyLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  179 IVGIMGGHVVGFEIFnkGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVPKAIKQVFWRILLFY 258
Cdd:pfam00324 161 LSGGNPNDGAIFRYL--GDNGGKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFY 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  259 ILAIFVIGMLIPYDSSALMGGSdNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFE 338
Cdd:pfam00324 239 ILSLLAIGLLVPWNDPGLLNDS-ASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPK 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  339 AFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKG-AYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQNYDKSKLKYTA 417
Cdd:pfam00324 318 FLKKVDKRGVPLRAILVSMVISLLALLLASLNPAiVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPFKA 397
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 581074247  418 KLFPFGPLFAGFLCIVVIIGQDVDFIKT-----GDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKK 478
Cdd:pfam00324 398 PLGPLGVILGLAAIIIILIIQFLYAFLPvpggpKNWGAGSFAAAYLIVLLFLIILIGVKLHVKNWK 463
 
Name Accession Description Interval E-value
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
5-489 0e+00

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 688.83  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   5 QNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTY 84
Cdd:COG0833    3 GSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTY 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  85 ATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIK 164
Cdd:COG0833   83 ATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFP--DVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 165 VITVIVFIAIGLLTIVGIMGGHVVGFEIFNKGEGPIlggnlGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVP 244
Cdd:COG0833  161 VITVIAFIIVGLLMIFGIIGGHAPGFSNFTTGDGPF-----PGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIP 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 245 KAIKQVFWRILLFYILAIFVIGMLIPYDSSalmggsdNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYAST 324
Cdd:COG0833  236 KAIRQVFWRILLFYILAIFVIAALIPYTDA-------GVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYAST 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 325 RMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKG-AYEYIVAASGLTGFIAWVGIAVSHYRFRRAF 403
Cdd:COG0833  309 RMLWSLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGtVYLWLLSISGLTGFIAWLGIAISHYRFRRAY 388
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 404 DKQNYDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQdvdfiktgDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIPLEQ 483
Cdd:COG0833  389 VAQGGDLEDLKYKAPLFPFGPIFAFILCLIVIIGQ--------AFDPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEE 460

                 ....*.
gi 581074247 484 VDLRQD 489
Cdd:COG0833  461 MDLSPE 466
PRK10836 PRK10836
lysine transporter; Provisional
12-479 3.30e-175

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 501.66  E-value: 3.30e-175
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  12 VKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDP 91
Cdd:PRK10836  13 LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEE 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  92 SLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVF 171
Cdd:PRK10836  93 GFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFP--DTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVF 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 172 IAIGLLTIVGIM-GGHVVGFEIFNKGEGPIlggnlGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVPKAIKQV 250
Cdd:PRK10836 171 IIVGVLMIIGIFkGAEPAGWSNWTIGDAPF-----AGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQV 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 251 FWRILLFYILAIFVIGMLIPY-DSSALMGGSDNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLYS 329
Cdd:PRK10836 246 FWRILLFYVFAILIISLIIPYtDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYT 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 330 MSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFvLQSL--TKGAYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQN 407
Cdd:PRK10836 326 LACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCF-LTSMfgNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQG 404
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 581074247 408 YDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKI 479
Cdd:PRK10836 405 HDLNDLPYRSGFFPLGPIFAFVLCLIITLGQNYEAFLKDTIDWGGVAATYIGIPLFLIIWFGYKLIKGTHFV 476
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-478 7.76e-150

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 435.70  E-value: 7.76e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   2 SKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGAlGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSF 81
Cdd:COG1113    3 TSAAASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGP-AVLLSYLIAGLIVFLVMRALGEMAVANPVSGSF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  82 STYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLA 161
Cdd:COG1113   82 SDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFP--DVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 162 LIKVITVIVFIAIGLLTIV---GIMGGHVVGFE-------IFNKGEGPilggnlggsllsILGVFLIAGFSFQGTELIGI 231
Cdd:COG1113  160 LIKVVAIVAFIVVGLLLIFfgfGLPGGPPAGLSnlwdhggFFPNGIGG------------VLAALQIVVFAFGGIELVGI 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 232 TAGESENPERAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSalmggsdNVATSPFTLVFKNAGFAFAASFMNAVILTS 311
Cdd:COG1113  228 AAAEAKDPEKTIPKAINSVIWRILLFYVGSLFVILALVPWNQI-------GAGGSPFVTVFSLLGIPAAAGIMNFVVLTA 300
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 312 VLSAGNSGMYASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLT-KGAYEYIVAASGLTGFIAWV 390
Cdd:COG1113  301 ALSSLNSGLYSTSRMLYSLAERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLpEKAFTFLLSISGFGALFVWL 380
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 391 GIAVSHYRFRRAFDKQNYDKSKLKytAKLFPFGPLF--AGFLCIVVIIGQDVDFIKTgdfnfsrfliTYMGIPVFLAFFI 468
Cdd:COG1113  381 MILVSQLKFRRRLPREGAAALKFK--MPGFPYTSYLtlAFLAAVLVLMAFDPDTRIA----------LIVGPVWLALLVV 448
                        490
                 ....*....|
gi 581074247 469 YHKLRYKTKK 478
Cdd:COG1113  449 GYFLVRRRRA 458
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
13-486 3.43e-145

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 424.77  E-value: 3.43e-145
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   13 KRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPV-SGSFSTYATRFVDP 91
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVvSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   92 SLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVF 171
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTD--KVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGF 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  172 IAIGLLTIVGIMGGH-VVGFEIFNKgEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVPKAIKQV 250
Cdd:TIGR00913 159 IILSIILNCGGGPNHgYIGFRYWHD-PGAFAGGTIGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRT 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  251 FWRILLFYILAIFVIGMLIPYDSSALMGGSDNVAT--SPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLY 328
Cdd:TIGR00913 238 FWRILVFYILTLFLIGFLVPYNDPRLLSSSSSSDSaaSPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLY 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  329 SMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKG-AYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQN 407
Cdd:TIGR00913 318 ALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAeVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQG 397
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  408 YDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKK-IPLEQVDL 486
Cdd:TIGR00913 398 RSLDELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPVKFSAKSFFEAYLSLPIFIALYIGHKVYKRDKLiIKLDDIDL 477
AA_permease pfam00324
Amino acid permease;
20-478 3.00e-119

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 358.17  E-value: 3.00e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   20 HISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGW 99
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  100 NYWFNWVVTVAADITIAAQVIQYWTPLQGIP-AWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVFIAIGLLT 178
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWELVPDIPyLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  179 IVGIMGGHVVGFEIFnkGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVPKAIKQVFWRILLFY 258
Cdd:pfam00324 161 LSGGNPNDGAIFRYL--GDNGGKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFY 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  259 ILAIFVIGMLIPYDSSALMGGSdNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFE 338
Cdd:pfam00324 239 ILSLLAIGLLVPWNDPGLLNDS-ASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPK 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  339 AFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKG-AYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQNYDKSKLKYTA 417
Cdd:pfam00324 318 FLKKVDKRGVPLRAILVSMVISLLALLLASLNPAiVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPFKA 397
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 581074247  418 KLFPFGPLFAGFLCIVVIIGQDVDFIKT-----GDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKK 478
Cdd:pfam00324 398 PLGPLGVILGLAAIIIILIIQFLYAFLPvpggpKNWGAGSFAAAYLIVLLFLIILIGVKLHVKNWK 463
PRK11387 PRK11387
S-methylmethionine permease;
1-488 3.99e-96

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 298.69  E-value: 3.99e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   1 MSKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGS 80
Cdd:PRK11387   1 MPEPTSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  81 FSTYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWL 160
Cdd:PRK11387  81 FHVYAARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFP--QVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWF 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 161 ALIKVITVIVFIAIGLLTIVGIM----GGHVVGFE-IFNKGEGPilggnlgGSLLSILGVFLIAGFSFQGTELIGITAGE 235
Cdd:PRK11387 159 SLIKVVTILAFIVLGGAAIFGFIpmqdGSPAPGLRnLTAEGWFP-------HGGLPILMTMVAVNFAFSGTELIGIAAGE 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 236 SENPERAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSAlmggsdnVATSPFTLVFKNAGFAFAASFMNAVILTSVLSA 315
Cdd:PRK11387 232 TENPAKVIPVAIRTTIARLVIFFVGTVLVLAALIPMQQAG-------VEKSPFVLVFEKVGIPYAADIFNFVILTAILSA 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 316 GNSGMYASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIifVLQSLTKGAYEYIVAASGLTGF---IAWVGI 392
Cdd:PRK11387 305 ANSGLYASGRMLWSLSNEGTLPACFARLTKRGIPLTALSVSMLGGLL--ALFSSVVAPDTVFVALSAISGFavvAVWLSI 382
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 393 AVSHYRFRRAFDKQNYDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQdvdfiktgDFNFSRFLITYMGIP-VFLAFFIYHK 471
Cdd:PRK11387 383 CASHFMFRRRHLRDGKALSELAYRAPWYPLTPILGFVLCLLACVGL--------AFDPSQRIALWCGIPfVALCYGAYYL 454
                        490
                 ....*....|....*..
gi 581074247 472 LRYKTKKIPLEQVDLRQ 488
Cdd:PRK11387 455 TQRLKRNMTQEARHVAE 471
PRK10249 PRK10249
phenylalanine transporter; Provisional
1-466 4.36e-88

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 277.64  E-value: 4.36e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   1 MSKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGAlGALIGYAIIGIMVFFLMTSLGEMATYLPVSGS 80
Cdd:PRK10249   8 SEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGP-AVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGS 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  81 FSTYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWL 160
Cdd:PRK10249  87 FAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFP--DVPTWIWAAAFFIIINAVNLVNVRLYGETEFWF 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 161 ALIKVITVIVFIAIGLLTIVGIMGGHVVGFEIFNKGEGpilgGNLGGSLLSILGVFLIAgFSFQGTELIGITAGESENPE 240
Cdd:PRK10249 165 ALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYGG----FFATGWNGLILSLAVIM-FSFGGLELIGITAAEARDPE 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 241 RAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSAlmggSDnvaTSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGM 320
Cdd:PRK10249 240 KSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVK----SN---SSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGV 312
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 321 YASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQS-LTKGAYEYIVAASGLTGFIAWVGIAVSHYRF 399
Cdd:PRK10249 313 YSNSRMLFGLSVQGNAPKFLTRVSRRGVPINSLMLSGAITSLVVLINYlLPQKAFGLLMALVVATLLLNWIMICLAHLRF 392
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 581074247 400 RRAFDKQNYDKsklKYTAKLFPFGPLFA-GFLCIVVIIGQDVDfiktgDFNFSRFLITYMGIPVFLAF 466
Cdd:PRK10249 393 RAAMRRQGRET---QFKALLYPFGNYLCiAFLGMILLLMCTMD-----DMRLSAILLPVWIVFLFVAF 452
PRK10238 PRK10238
aromatic amino acid transporter AroP;
5-465 1.07e-86

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 273.75  E-value: 1.07e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   5 QNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGAlGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTY 84
Cdd:PRK10238   3 GQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGP-GIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  85 ATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIK 164
Cdd:PRK10238  82 AYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYP--EIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 165 VITVIVFIAIG-LLTIVGIMGGHVVGFEIFNKGegpilgGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAV 243
Cdd:PRK10238 160 VIAVVAMIIFGgWLLFSGNGGPQATVSNLWDQG------GFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSI 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 244 PKAIKQVFWRILLFYILAIFVIGMLIPYDSSalmggsdNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYAS 323
Cdd:PRK10238 234 PKATNQVIYRILIFYIGSLAVLLSLMPWTRV-------TADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCN 306
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 324 TRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLT-KGAYEYIVAASGLTGFIAWVGIAVSHYRFRRA 402
Cdd:PRK10238 307 SRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLApESAFGLLMALVVSALVINWAMISLAHMKFRRA 386
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 581074247 403 FDKQNYdksKLKYTAKLFPFGplfaGFLCIVVIIGQDVDFIKTGDFNFSRFLitymgIPVFLA 465
Cdd:PRK10238 387 KQEQGV---VTRFPALLYPLG----NWICLLFMAAVLVIMLMTPGMAISVYL-----IPVWLI 437
PRK10746 PRK10746
putative transport protein YifK; Provisional
7-402 4.25e-74

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 241.26  E-value: 4.25e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   7 ESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGAlGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYAT 86
Cdd:PRK10746   3 DNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGP-SVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  87 RFVDPSLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVI 166
Cdd:PRK10746  82 RYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFP--EMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVT 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 167 TVIVFIAIGLLTIVGIMG--GHVVGFEIFNKGEGpilggNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVP 244
Cdd:PRK10746 160 TIIVMIVIGLGVIFFGFGngGQSIGFSNLTEHGG-----FFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLR 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 245 KAIKQVFWRILLFYILAIFVIGMLIPYDSSALMGgsdnvatSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYAST 324
Cdd:PRK10746 235 SAVGKVLWRILIFYVGAIFVIVTIFPWNEIGSNG-------SPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCG 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 325 RMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLT---KGAYEYIVAASGLTGFIAWVGIAVSHYRFRR 401
Cdd:PRK10746 308 RMLYALAKNRQLPAAMAKVSRHGVPVAGVAVSILILLVGSCLNYIIpnpQRVFVYVYSASVLPGMVPWFVILISQLRFRR 387

                 .
gi 581074247 402 A 402
Cdd:PRK10746 388 A 388
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
13-401 3.87e-69

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 228.46  E-value: 3.87e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  13 KRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGAlGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPS 92
Cdd:PRK11049  19 RRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGP-SIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPW 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  93 LGFALGWNYWFNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVFI 172
Cdd:PRK11049  98 AGYFTGWTYWFCWVVTGIADVVAITAYAQFWFP--DLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALI 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 173 AIGLLTIvgIMG-----GHVVGFE-IFNKGegpilgGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVPKA 246
Cdd:PRK11049 176 VVGLVMV--AMHfqsptGVEASFAhLWNDG------GMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRA 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 247 IKQVFWRILLFYILAIFVIGMLIPYdssalmggSDNVAT-SPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTR 325
Cdd:PRK11049 248 INSIPIRIIMFYVFALIVIMSVTPW--------SSVVPDkSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSR 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 326 MLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAII----VVIIFVLQSLTKgAYEYIVAASGLTGFIAWVGIAVSHYRFRR 401
Cdd:PRK11049 320 MLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICllggVVLLYVNPSVIG-AFTLVTTVSAILFMFVWTIILCSYLVYRK 398
proY PRK10580
putative proline-specific permease; Provisional
7-437 1.41e-61

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 208.14  E-value: 1.41e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   7 ESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGAlGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYAT 86
Cdd:PRK10580   2 ESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  87 RFVDPSLGFALGWNYWFNWVVTVAADITIAAQVIQYWTPLqgIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVI 166
Cdd:PRK10580  81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPT--VPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 167 TVIVFIAIGLLTIV-GI-MGGHVVGFEIFNKGEGpilggnlgGSLLSILGVFL---IAGFSFQGTELIGITAGESENPER 241
Cdd:PRK10580 159 TIIIMIVAGIGIIIwGIgNGGQPTGIHNLWSNGG--------FFSNGWLGMVMslqMVMFAYGGIEIIGITAGEAKDPEK 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 242 AVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSALMGgsdnvatSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMY 321
Cdd:PRK10580 231 SIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTNG-------SPFVLTFQHMGITFAASILNFVVLTASLSAINSDVF 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 322 ASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKGAYeYIVAASGLTGFIAWVGIAV--SHYRF 399
Cdd:PRK10580 304 GVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENV-FLVIASLATFATVWVWIMIllSQIAF 382
                        410       420       430
                 ....*....|....*....|....*....|....*...
gi 581074247 400 RRAFDKQNYDKSKLKYTAKLFPFGPLFAGFLCIVVIIG 437
Cdd:PRK10580 383 RRRLPPEEVKALKFKVPGGVATTIGGLIFLVFIIGLIG 420
PRK15049 PRK15049
L-asparagine permease;
14-402 7.10e-61

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 207.55  E-value: 7.10e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  14 RGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIgYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSL 93
Cdd:PRK15049  28 KAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALV-YLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKA 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  94 GFALGWNYWFNWVVTVAADITIAAQVIQYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVFIA 173
Cdd:PRK15049 107 AYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLV 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 174 IG--LLTIVGIMGGHVVGFEIFNKGEGpilggnlGGSLLSILGVFLIAG--FSFQGTELIGITAGESENPERAVPKAIKQ 249
Cdd:PRK15049 187 VGtvFLGSGQPLDGNTTGFHLITDNGG-------FFPHGLLPALVLIQGvvFAFASIEMVGTAAGECKDPQTMVPKAINS 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 250 VFWRILLFYILAIFVIGMLIPYDSSalmggsdNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLYS 329
Cdd:PRK15049 260 VIWRIGLFYVGSVVLLVMLLPWSAY-------QAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRS 332
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 581074247 330 MSKDKLAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKGAYEYIVAASGLTGFIA-WVGIAVSHYRFRRA 402
Cdd:PRK15049 333 MAMGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIAsWAFIIVCQMRLRKA 406
PRK10197 PRK10197
GABA permease;
23-446 1.31e-59

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 202.93  E-value: 1.31e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  23 MIAIGGCIGTGLFVTSGGAIHDAGAlGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYW 102
Cdd:PRK10197   1 MLSIAGVIGASLFVGSSVAIAEAGP-AVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYW 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 103 FNWVVTVAADITIAAQVIQYWTPlqGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVFIAIGLLTIVGI 182
Cdd:PRK10197  80 WFWVLVIPLEANIAAMILHSWVP--GIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGF 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 183 MG-GHVVGFEIFNKGEGpilggNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVPKAIKQVFWRILLFYILA 261
Cdd:PRK10197 158 YPyAEVSGISRLWDSGG-----FMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCS 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 262 IFVIGMLIPYDSSALMggsdnvATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFEAFG 341
Cdd:PRK10197 233 IFVVVALIPWNMPGLK------AVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMG 306
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 342 KTNKNGVPYMS-LLVTAIIVVIIFVLQSLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQNydkSKLKYTAKLF 420
Cdd:PRK10197 307 KINRSKTPYVAvLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEG---SEIRLRMWLY 383
                        410       420       430
                 ....*....|....*....|....*....|..
gi 581074247 421 PFGP-LFAGFLCIVVII-----GQDVDFIKTG 446
Cdd:PRK10197 384 PWLTwLVIGFITFVLVVmlfrpAQQLEVISTG 415
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
13-436 1.13e-46

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 167.77  E-value: 1.13e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  13 KRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGAlGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPS 92
Cdd:COG0531   10 KRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGP-AAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  93 LGFALGWNYWFNWVVTVAADITIAAQVIQYWTPLQGipAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVFI 172
Cdd:COG0531   89 LGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGG--SVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFI 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 173 AIGLltiVGIMGGHVVGFEIFNKGegpilggnlggsLLSILGVFLIAGFSFQGTELIGITAGESENPERAVPKAIKQVFW 252
Cdd:COG0531  167 VVGL---FAFDPANFTPFLPAGGG------------LSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLL 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 253 RILLFYILAIFVIGMLIPYDSSAlmggsdnVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMSK 332
Cdd:COG0531  232 IVGVLYILVSLALTGVVPYDELA-------ASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMAR 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 333 DKLAFEAFGKTN-KNGVPYMSLLVTAIIVVIIFVlqsLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFRRafdKQNYDKS 411
Cdd:COG0531  305 DGLLPKVFAKVHpRFGTPVNAILLTGVIALLLLL---LGAASFTALASLASVGVLLAYLLVALAVIVLRR---RRPDLPR 378
                        410       420
                 ....*....|....*....|....*
gi 581074247 412 KLKYtakLFPFGPLFAGFLCIVVII 436
Cdd:COG0531  379 PFRV---PLPLIPILGILLCLFLLY 400
AA_permease_2 pfam13520
Amino acid permease;
24-440 6.86e-30

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 121.26  E-value: 6.86e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   24 IAIGGCIGTGLFVTSGGAihdaGALGALIGYAIIGIMVFFLMTSL--GEMATYLPVSGSFSTYATRFVDPSLGFALGWNY 101
Cdd:pfam13520   9 LVIGSVIGSGIFVAPLVA----SGGPALIVWGWIAAIIFSLAVGLvyAELSSALPRSGGIYVYLENAFGKFVAFLAGWSN 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  102 WFNWVVTVAADITIAAQVIQYWTPLQgIPAWAW-----SALFLVIIFSLNSLSVRVYGESEYWLALIKV-ITVIVFIAIG 175
Cdd:pfam13520  85 WFAYVLGLASSASVAASYLLSALGPD-LVPTTWltygiAIAILIIFAIINIRGVRESAKIQNILGILKLlLPLILIIILG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  176 LLTIVGIMGGHVVGFEIFNKGEGPilggnlggslLSILGVFLIAGFSFQGTELIGITAgeSENPERAVPKAIKQVFWRIL 255
Cdd:pfam13520 164 LVTADGGGFNLLSGEWHTFFPDGW----------PGVFAGFLGVLWSFTGFESAANVS--EEVKKRNVPKAIFIGVIIVG 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  256 LFYILAIFVIGMLIPYDSSALMGGSDNVAtspfTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKL 335
Cdd:pfam13520 232 VLYILVNIAFFGVVPDDEIALSSGLGQVA----ALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGV 307
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  336 --AFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFRrafdKQNYDKSKL 413
Cdd:pfam13520 308 lpFSRFFAKVNKFGSPIRAIILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILR----KKRPDLGRI 383
                         410       420
                  ....*....|....*....|....*..
gi 581074247  414 KYTAKLFPFGPLFAGFLCIVVIIGQDV 440
Cdd:pfam13520 384 PGRWPVAIFGILFSLFLIVALFFPPVG 410
frlA PRK11357
amino acid permease;
24-369 3.50e-13

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 71.43  E-value: 3.50e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  24 IAIGGCIGTGLFVTSGGAIHDAGA-LGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGW-NY 101
Cdd:PRK11357  18 IAVGTTVGSGIFVSVGEVAKAAGTpWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPLAFLSGWaSF 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 102 WFNWVVTVAADITIAAQVIQYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVFIAIGLLTIVG 181
Cdd:PRK11357  98 WANDAPSLSIMALAIVSNLGFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKA 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 182 ImgghvvgfeifNKGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVPKAIKQVFWRILLFYILA 261
Cdd:PRK11357 178 E-----------NFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLL 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 262 IFVIGMLIPYDSSAlmgGSDNVATSPFTLVFKNAGFAFAASFMNAVILtsVLSAGNSGMYASTRMLYSMSKDKLAFEAFG 341
Cdd:PRK11357 247 ALVISGLMPFDKLA---NSETPISDALTWIPALGSTAGIFVAITAMIV--ILGSLSSCVMYQPRLEYAMAKDNLFFKCFG 321
                        330       340       350
                 ....*....|....*....|....*....|..
gi 581074247 342 KTN-KNGVPYMSLLV-TAIIVVIIFV--LQSL 369
Cdd:PRK11357 322 HVHpKYNTPDVSIILqGALGIFFIFVsdLTSL 353
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
24-475 2.65e-11

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 65.54  E-value: 2.65e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   24 IAIGGCIGTGLFVTSGGAIHDAGALG-ALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGW--N 100
Cdd:TIGR00911  52 IIVGTIIGSGIFVSPKGVLKNAGSVGlALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLLAFLRLWieL 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  101 YWFNWVVTVAADITIAAQVIQYWTPLQGIPAWAW---SALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVFIAIGll 177
Cdd:TIGR00911 132 LVIRPGSQAVNALNFAIYILTPVFPDCEVPEWAIrlvAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITG-- 209
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  178 tIVGIMGGHVVGFEIFNKGEGpilggnLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPERAVPKAIKQVFWRILLF 257
Cdd:TIGR00911 210 -WVQLGKGGVESLNPKNAFEG------TETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFI 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  258 YILAIFVIGMLIPYDSsalMGGSDNVATSPFTLVFKNAGFAfaasfMNAVILTSVLSAGNSGMYASTRMLYSMSKD-KLA 336
Cdd:TIGR00911 283 YVLTNIAYFTVLSPEE---LLASLAVAVDFGERLLGVMSWA-----MPALVGLSCFGSVNGSLFSSSRLFFVGGREgHLP 354
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  337 FEAFGKTNKNGVPYMSLlvtaIIVVIIFVLQSLTKGAYEYIvaasGLTGFIAWV--GIAVSHYRFRRafdkqnYDKSKLK 414
Cdd:TIGR00911 355 SLLSMIHVKRLTPLPSL----LIVCTLTLLMLFSGDIYSLI----NLISFANWLfnALAVAGLLWLR------YKRPEMN 420
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 581074247  415 YTAKLFPFGPLFAGFLCIVVIIgqdVDFIKTGDFNFSRFLITYMGIPVFLaFFIYHKLRYK 475
Cdd:TIGR00911 421 RPIKVPLFFPVFFLLSCLFLII---LSLYSPPVGCGVGFIIMLTGVPVYF-FGVWWQNKPK 477
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
12-369 9.98e-10

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 60.98  E-value: 9.98e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   12 VKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDP 91
Cdd:TIGR00906  26 MKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGE 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   92 SLGFALGWNYWFNWVVTVAAditIAAQVIQYWTPLQGIPAWAWS------------------ALFLVIIFSLnSLSVRVY 153
Cdd:TIGR00906 106 LWAFITGWNLILEYVIGTAA---VARSWSAYFDELLNKQIGQFRrtyfklnydglaeypdffAVCLILLLAV-LLSFGVK 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  154 GESEywlaLIKVITVIVFIAIGLLTIVGIMGGHVVGFEI-FNKGEGpilggnlGGSLLSILGVFLIAG---FSFQGTELI 229
Cdd:TIGR00906 182 ESAW----VNKIFTAINILVLLFVIIAGFTKADVANWSItEEKGAG-------GFMPYGFTGVLSGAAtcfFAFIGFDAI 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  230 GITAGESENPERAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSAlmggsdnvATSPFTLVFKNAGFAFAASFMNAVIL 309
Cdd:TIGR00906 251 ATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLD--------PDAPFPVAFEYVGWDPAKYIVAVGAL 322
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 581074247  310 TSVLSAGNSGMYASTRMLYSMSKDKLAFEAFGKTN-KNGVPYMSLLVTAIIVVII---FVLQSL 369
Cdd:TIGR00906 323 CGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQINsKTKTPINATVVSGAIAALMaflFDLKAL 386
CodB COG1457
Purine-cytosine permease or related protein [Nucleotide transport and metabolism];
13-401 9.37e-07

Purine-cytosine permease or related protein [Nucleotide transport and metabolism];


Pssm-ID: 441066 [Multi-domain]  Cd Length: 448  Bit Score: 51.02  E-value: 9.37e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  13 KRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTyatRFVDPS 92
Cdd:COG1457   26 ERHGSPRSLFWVWFGANVALATFVIGALLGLGLGFWQALLAILLGNLIGFLLGALIAYIGARTGLPTMLLS---RAAFGY 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  93 LGFALGWnyWFNWVVTV---AADITIAAQVIQYWTPLQGIPAWAWSALFLVIIFSLNSLSVRvygeseyWLALIKVITVI 169
Cdd:COG1457  103 RGSTLPS--LLNALTTIgwfAVEAAIAAQALAALLGGLGIPLVLAYLIVGLLVILLAIFGYR-------AISRLQRWAVP 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 170 VFIAIGLLTIVGIMGGHVVGfEIFNKGEGpilggnlGGSLLSILGVFLIAGFsfqGTELIGITAGESenpeRAVPKAI-- 247
Cdd:COG1457  174 LLLVLFVLLVVLALSHPGLS-ALLAYPPG-------SSPLSFGAAVSVVAGL---FISWAPYAADYS----RYLPRKTsg 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 248 KQVFWRILLFYILAIFVIGMLipydsSALMGGSDNVATSPFTLVFKNAGFAFAASFMNAVILtSVLSAGNSGMYASTrml 327
Cdd:COG1457  239 RAVFWATFLGFVLGGVLLMLL-----GALLAAAAPGAADPVGALGALLPTGLGVPALLVVIL-SQWTINVLNLYSAS--- 309
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 581074247 328 ysmskdkLAFEAFGktNKNGVPYMSLLVTAIIVVIIFVlqsltkGAYEYIVAASGLTG--FIAWVGIAVSHYRFRR 401
Cdd:COG1457  310 -------LALSNLF--PRLGRVVATLVVGVIGTLLALL------GFLDAFENFLLLLGvvLPPWGGIMLADYFLVR 370
PRK10644 PRK10644
arginine/agmatine antiporter;
23-375 3.23e-05

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 46.32  E-value: 3.23e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  23 MIAiGGCIGTGLFVTSGGAIHDAGAlgALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYW 102
Cdd:PRK10644  18 MVA-GNIMGSGVFLLPANLASTGGI--AIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLYW 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 103 F-NWVVTVAADItIAAQVIQYWTPLQGIP-AWAWSALFLVIIFS-LNSLSVRVYGESEYW---LALIKVITVIVFIAIGL 176
Cdd:PRK10644  95 LaCWIGNIAMVV-IGVGYLSYFFPILKDPlVLTITCVVVLWIFVlLNIVGPKMITRVQAVatvLALIPIVGIAVFGWFWF 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 177 LTIVGIMGGHVVGFEIFnkgeGPILGgnlggsllsILGVFLiagFSFQGTELIGITAGESENPERAVPKAIKQVFWRILL 256
Cdd:PRK10644 174 RGETYMAAWNVSGLGTF----GAIQS---------TLNVTL---WSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAV 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 257 FYILAIFVIGMLIPydSSALMggsdnVATSPFTLVfknAGFAFAASFMNAVILTSvlSAGNSGMYASTRMLY-----SMS 331
Cdd:PRK10644 238 CYVLSSTAIMGMIP--NAALR-----VSASPFGDA---ARMALGDTAGAIVSFCA--AAGCLGSLGGWTLLAgqtakAAA 305
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 581074247 332 KDKLAFEAFGKTNKNGVPYMSLLVTAIIVViIFVLQSLTKGAYE 375
Cdd:PRK10644 306 DDGLFPPIFARVNKAGTPVAGLLIVGVLMT-IFQLSSISPNASK 348
PRK15238 PRK15238
inner membrane transporter YjeM; Provisional
212-368 3.07e-03

inner membrane transporter YjeM; Provisional


Pssm-ID: 237929 [Multi-domain]  Cd Length: 496  Bit Score: 39.92  E-value: 3.07e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 212 ILGVFLIAGFSFQGTELIGITAGESENPERAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSaLMGGSDNVATSPFtLV 291
Cdd:PRK15238 213 VLSFVVFAIFAYGGIEAVGGLVDKTENPEKNFPKGIIIAAIVISIGYSLAIFLWGVSTNWQQV-LSNKSVNLGNITY-VL 290
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247 292 FKNAGFAF--------AASFMNAVILTSV--LSAGNSGMYASTRMLYSMSKD-------KLAFEAFGKTNKNGVPYMSLL 354
Cdd:PRK15238 291 MNNLGYTLghalglspAASLTLGVWFARItgLSMFLAYTGAFFTLSYSPLKQliegtpkALWPKKMTKLNKNGMPANAMW 370
                        170
                 ....*....|....
gi 581074247 355 VTAIIVVIIFVLQS 368
Cdd:PRK15238 371 LQCIIVSVFILLVS 384
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
32-390 6.11e-03

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 38.96  E-value: 6.11e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247   32 TGLFVTSGGAIHDAGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVD----PSLGFALGWNYWFNWVV 107
Cdd:TIGR00907  31 TGISTTYNYGLSSGGAMSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLAPprqmPFASWMTGWFNLAGQVA 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  108 TVAADITIAAQVIQ----YWTPLQGIPAWAWS-----ALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVFIAIGLLT 178
Cdd:TIGR00907 111 GTASTDLSVAQLILgivsLTTPGREYIPTRWHifgimIGIHLIHALINSLPTKWLPRITSSAAYWSLLGFLTICITLLAC 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  179 IVGIMGGHVVGFEIFNKGEGPILGGNLGGsllsILGvFLIAGFSFQGTELIGITAGESENPERAVPKAIKQ---VFWRIL 255
Cdd:TIGR00907 191 KSPKFNDGKFVFTNFNNSTGGWKPGGFAF----LLG-LLNPAWSMTGYDGTAHMAEEIENPEVVGPRAIIGavaIGIVTG 265
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  256 LFYILAI-FVIGMLIPYDSSAlmggsdnvATSPFTLVFKNA-GFAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMSKD 333
Cdd:TIGR00907 266 FCFNIVLfFSMGDIDSLISST--------TGQPIAQIFYNAlGNKAGAIFLLCLILVTSFFCAITCMTANSRMIYAFSRD 337
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 581074247  334 KL--AFEAFGKTNKN-GVPYMSLLVTAIIVVIIFVLQSLTKGAYEYIVAASGLTGFIAWV 390
Cdd:TIGR00907 338 GGlpFSPLWSRVNPRtQVPLNAVWLSAVWIILIGLLGLGSSTAFQAIFSVCTVALDVSYV 397
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH