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Conserved domains on  [gi|579332312|gb|EUT83211|]
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hypothetical protein PFAG_03628 [Plasmodium falciparum Santa Lucia]

Protein Classification

ring-infected erythrocyte surface antigen domain-containing protein( domain architecture ID 1000663)

ring-infected erythrocyte surface antigen (RESA) domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PTZ00341 super family cl31759
Ring-infected erythrocyte surface antigen; Provisional
 155-714 3.30e-43

Ring-infected erythrocyte surface antigen; Provisional


The actual alignment was detected with superfamily member PTZ00341:

Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 168.43  E-value: 3.30e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  155 MSGTKSNVIESNVSS-TITKSLERNDSNTNIQEKVPKESKNTRKDVRT---KNVNTSKRNEGLNDINEsEKTRTRRPSTK 230
Cdd:PTZ00341  428 LDGSEDESVEDNEEEhSGDANEEELSVDEHVEEHNADDSGEQQSDDESgehQSVNEIVEEQSVNEHVE-EPTVADIVEQE 506

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  231 SNNNNVsyenELESVSESFDNFLEDHMKEgvfldgekktshRKEVDDEKEHNRYDNKEKKKKDFDKRRTKFSSSDNRYKY 310
Cdd:PTZ00341  507 TVDEHV----EEPAVDENEEQQTADEHVE------------EPTIAEEHVEEEISTAEEHIEEPASDVQQDSEAAPTIEI 570

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  311 ADTTYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEeAKVKFQKVNEAYQILSDKEKRAQYDRMGMQCVEDMTLID 390
Cdd:PTZ00341  571 PDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNE-GFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNFIH 649

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  391 PSLlFMMLFSSEKLCDYIGVYDLTYMFNFIMK---SMNE-----EHggglmfnmlglMNKFFDKFkkdQEDREFDLAVSL 462
Cdd:PTZ00341  650 PSI-FYLLASLEKFADFTGSPQIVTLLKFFFEkklSMNDldnksEH-----------LLKFMEQY---QKEREAHISENL 714

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  463 KYRLEGYVNGDDDWEKQMENEIEDLLESNFSGHILESVGWIYENVGKCYiLKNTTfmgwgaRSAKKeYKKRDRMNDKRVF 542
Cdd:PTZ00341  715 INILQPCIAGDRKWDVPIIDKIEELKGSPFDIAIIDSIGWIFKHVAKSH-LKKPK------KAAKK-LEQRSKANKEELA 786

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  543 RSIFNTMGMIARFVLNPPPFMLEGQYMNYNNMGQimNNENtsnscimcsssnrgpyGVQNINGLgNYSNEmvvetyiRKI 622
Cdd:PTZ00341  787 NENNKLMNILKEYFGNNEQINSITYNFENINLNE--DNEN----------------GSKKILDL-NHKDQ-------KEI 840

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  623 FDSLMSTIVTLFLSIIEGTVRTSCKMVLVELDVDKDTLFKRAEGMKLLGQKMQKLAKRKKEKSAEKE----------MNS 692
Cdd:PTZ00341  841 FEEIISYIVDISLSDIENTAKNAAEQILSDEGLDEKKLKKRAESLKKLANAIEKYAGGGKKDKKAKKkdakdlsgniAHE 920

                         570       580
                  ....*....|....*....|..
gi 579332312  693 MDIIEKAIKEAKLRMESYREEN 714
Cdd:PTZ00341  921 INLINKELKNQNENVPEHLKEH 942
 
Name Accession Description Interval E-value
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 155-714 3.30e-43

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 168.43  E-value: 3.30e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  155 MSGTKSNVIESNVSS-TITKSLERNDSNTNIQEKVPKESKNTRKDVRT---KNVNTSKRNEGLNDINEsEKTRTRRPSTK 230
Cdd:PTZ00341  428 LDGSEDESVEDNEEEhSGDANEEELSVDEHVEEHNADDSGEQQSDDESgehQSVNEIVEEQSVNEHVE-EPTVADIVEQE 506

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  231 SNNNNVsyenELESVSESFDNFLEDHMKEgvfldgekktshRKEVDDEKEHNRYDNKEKKKKDFDKRRTKFSSSDNRYKY 310
Cdd:PTZ00341  507 TVDEHV----EEPAVDENEEQQTADEHVE------------EPTIAEEHVEEEISTAEEHIEEPASDVQQDSEAAPTIEI 570

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  311 ADTTYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEeAKVKFQKVNEAYQILSDKEKRAQYDRMGMQCVEDMTLID 390
Cdd:PTZ00341  571 PDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNE-GFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNFIH 649

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  391 PSLlFMMLFSSEKLCDYIGVYDLTYMFNFIMK---SMNE-----EHggglmfnmlglMNKFFDKFkkdQEDREFDLAVSL 462
Cdd:PTZ00341  650 PSI-FYLLASLEKFADFTGSPQIVTLLKFFFEkklSMNDldnksEH-----------LLKFMEQY---QKEREAHISENL 714

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  463 KYRLEGYVNGDDDWEKQMENEIEDLLESNFSGHILESVGWIYENVGKCYiLKNTTfmgwgaRSAKKeYKKRDRMNDKRVF 542
Cdd:PTZ00341  715 INILQPCIAGDRKWDVPIIDKIEELKGSPFDIAIIDSIGWIFKHVAKSH-LKKPK------KAAKK-LEQRSKANKEELA 786

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  543 RSIFNTMGMIARFVLNPPPFMLEGQYMNYNNMGQimNNENtsnscimcsssnrgpyGVQNINGLgNYSNEmvvetyiRKI 622
Cdd:PTZ00341  787 NENNKLMNILKEYFGNNEQINSITYNFENINLNE--DNEN----------------GSKKILDL-NHKDQ-------KEI 840

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  623 FDSLMSTIVTLFLSIIEGTVRTSCKMVLVELDVDKDTLFKRAEGMKLLGQKMQKLAKRKKEKSAEKE----------MNS 692
Cdd:PTZ00341  841 FEEIISYIVDISLSDIENTAKNAAEQILSDEGLDEKKLKKRAESLKKLANAIEKYAGGGKKDKKAKKkdakdlsgniAHE 920

                         570       580
                  ....*....|....*....|..
gi 579332312  693 MDIIEKAIKEAKLRMESYREEN 714
Cdd:PTZ00341  921 INLINKELKNQNENVPEHLKEH 942
DnaJ-X pfam14308
X-domain of DnaJ-containing; IN certain plant and yeast proteins, the DnaJ-1 proteins have a ...
 451-693 9.54e-40

X-domain of DnaJ-containing; IN certain plant and yeast proteins, the DnaJ-1 proteins have a three-domain structure. The x-domain lies between the N-terminal DnaJ and the C-terminal Z domains. The exact function is not known.


Pssm-ID: 433858  Cd Length: 205  Bit Score: 145.37  E-value: 9.54e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  451 QEDREFDLAVSLKYRLEGYVNGD------DDWEKQMENEIEDLLESNFSGHILESVGWIYENVGKCYiLKNTTFMGWGAR 524
Cdd:pfam14308   1 QKEREEELAEKLRDRLSPYVEADkpgdvlDEFEEKLEEEAEDLKLESFGVEILHTIGWVYENKAKSF-LKSQKFLGVGGF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  525 SAKKEYKKRDRMNDKRVFRSIFNTMGMiarfvlnpppfmlegqymnynnMGQIMNNENTSnscimcsssnrgpygvqnin 604
Cdd:pfam14308  80 FSSVKEKGRTVKNTWNTLSSALDAQST----------------------MEEMAKEEEKG-------------------- 117

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  605 glGNYSNEMVVETYIRKIFDSLMSTIVTLFLSIIEGTVRTSCKMVLVELDVDKDTLFKRAEGMKLLGQKMQKLAKRKKEK 684
Cdd:pfam14308 118 --GEELTEEELAKLEELLTGKILAAAWAGSKFEIESTLREVCDKVLKDKSVPKKTRIKRAEALLILGKIFQKAKRDPEEE 195


                  ....*....
gi 579332312  685 SAEKEMNSM 693
Cdd:pfam14308 196 EEARVFEEL 204
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 314-379 2.99e-33

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 124.43  E-value: 2.99e-33
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 579332312 314 TYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFG 66
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 315-379 8.74e-26

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 109.23  E-value: 8.74e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312  315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPgDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFG 65
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 314-368 8.86e-26

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 100.31  E-value: 8.86e-26
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 314 TYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSD 368
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
313-371 2.99e-25

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 98.85  E-value: 2.99e-25
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312   313 TTYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGD-EEAKVKFQKVNEAYQILSDKEK 371
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDkEEAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
315-379 2.84e-19

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 91.03  E-value: 2.84e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNpGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:NF037946   7 YYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDKYG 70
 
Name Accession Description Interval E-value
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 155-714 3.30e-43

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 168.43  E-value: 3.30e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  155 MSGTKSNVIESNVSS-TITKSLERNDSNTNIQEKVPKESKNTRKDVRT---KNVNTSKRNEGLNDINEsEKTRTRRPSTK 230
Cdd:PTZ00341  428 LDGSEDESVEDNEEEhSGDANEEELSVDEHVEEHNADDSGEQQSDDESgehQSVNEIVEEQSVNEHVE-EPTVADIVEQE 506

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  231 SNNNNVsyenELESVSESFDNFLEDHMKEgvfldgekktshRKEVDDEKEHNRYDNKEKKKKDFDKRRTKFSSSDNRYKY 310
Cdd:PTZ00341  507 TVDEHV----EEPAVDENEEQQTADEHVE------------EPTIAEEHVEEEISTAEEHIEEPASDVQQDSEAAPTIEI 570

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  311 ADTTYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEeAKVKFQKVNEAYQILSDKEKRAQYDRMGMQCVEDMTLID 390
Cdd:PTZ00341  571 PDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNE-GFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNFIH 649

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  391 PSLlFMMLFSSEKLCDYIGVYDLTYMFNFIMK---SMNE-----EHggglmfnmlglMNKFFDKFkkdQEDREFDLAVSL 462
Cdd:PTZ00341  650 PSI-FYLLASLEKFADFTGSPQIVTLLKFFFEkklSMNDldnksEH-----------LLKFMEQY---QKEREAHISENL 714

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  463 KYRLEGYVNGDDDWEKQMENEIEDLLESNFSGHILESVGWIYENVGKCYiLKNTTfmgwgaRSAKKeYKKRDRMNDKRVF 542
Cdd:PTZ00341  715 INILQPCIAGDRKWDVPIIDKIEELKGSPFDIAIIDSIGWIFKHVAKSH-LKKPK------KAAKK-LEQRSKANKEELA 786

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  543 RSIFNTMGMIARFVLNPPPFMLEGQYMNYNNMGQimNNENtsnscimcsssnrgpyGVQNINGLgNYSNEmvvetyiRKI 622
Cdd:PTZ00341  787 NENNKLMNILKEYFGNNEQINSITYNFENINLNE--DNEN----------------GSKKILDL-NHKDQ-------KEI 840

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  623 FDSLMSTIVTLFLSIIEGTVRTSCKMVLVELDVDKDTLFKRAEGMKLLGQKMQKLAKRKKEKSAEKE----------MNS 692
Cdd:PTZ00341  841 FEEIISYIVDISLSDIENTAKNAAEQILSDEGLDEKKLKKRAESLKKLANAIEKYAGGGKKDKKAKKkdakdlsgniAHE 920

                         570       580
                  ....*....|....*....|..
gi 579332312  693 MDIIEKAIKEAKLRMESYREEN 714
Cdd:PTZ00341  921 INLINKELKNQNENVPEHLKEH 942
DnaJ-X pfam14308
X-domain of DnaJ-containing; IN certain plant and yeast proteins, the DnaJ-1 proteins have a ...
 451-693 9.54e-40

X-domain of DnaJ-containing; IN certain plant and yeast proteins, the DnaJ-1 proteins have a three-domain structure. The x-domain lies between the N-terminal DnaJ and the C-terminal Z domains. The exact function is not known.


Pssm-ID: 433858  Cd Length: 205  Bit Score: 145.37  E-value: 9.54e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  451 QEDREFDLAVSLKYRLEGYVNGD------DDWEKQMENEIEDLLESNFSGHILESVGWIYENVGKCYiLKNTTFMGWGAR 524
Cdd:pfam14308   1 QKEREEELAEKLRDRLSPYVEADkpgdvlDEFEEKLEEEAEDLKLESFGVEILHTIGWVYENKAKSF-LKSQKFLGVGGF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  525 SAKKEYKKRDRMNDKRVFRSIFNTMGMiarfvlnpppfmlegqymnynnMGQIMNNENTSnscimcsssnrgpygvqnin 604
Cdd:pfam14308  80 FSSVKEKGRTVKNTWNTLSSALDAQST----------------------MEEMAKEEEKG-------------------- 117

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312  605 glGNYSNEMVVETYIRKIFDSLMSTIVTLFLSIIEGTVRTSCKMVLVELDVDKDTLFKRAEGMKLLGQKMQKLAKRKKEK 684
Cdd:pfam14308 118 --GEELTEEELAKLEELLTGKILAAAWAGSKFEIESTLREVCDKVLKDKSVPKKTRIKRAEALLILGKIFQKAKRDPEEE 195


                  ....*....
gi 579332312  685 SAEKEMNSM 693
Cdd:pfam14308 196 EEARVFEEL 204
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 314-379 2.99e-33

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 124.43  E-value: 2.99e-33
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 579332312 314 TYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFG 66
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 314-376 6.67e-33

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 120.66  E-value: 6.67e-33
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 579332312  314 TYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYD 376
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 315-379 7.40e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 121.79  E-value: 7.40e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK10767   6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYG 70
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 315-379 8.74e-26

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 109.23  E-value: 8.74e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312  315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPgDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFG 65
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 314-368 8.86e-26

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 100.31  E-value: 8.86e-26
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 314 TYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSD 368
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
313-371 2.99e-25

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 98.85  E-value: 2.99e-25
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312   313 TTYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGD-EEAKVKFQKVNEAYQILSDKEK 371
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDkEEAEEKFKEINEAYEVLSDPEK 60
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 315-379 1.50e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 103.34  E-value: 1.50e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14277   7 YYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFG 71
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 315-379 1.67e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 102.90  E-value: 1.67e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14301   6 YYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFG 70
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 315-379 7.14e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 101.08  E-value: 7.14e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKN--PGDEEakvKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14298   7 YYEILGLSKDASVEDIKKAYRKLAMKYHPDKNkePDAEE---KFKEISEAYAVLSDAEKRAQYDRFG 70
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 315-379 7.17e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 101.42  E-value: 7.17e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14281   5 YYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFG 69
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 315-384 1.62e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 99.84  E-value: 1.62e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMGMQCVE 384
Cdd:PRK14294   6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLS 75
PRK14297 PRK14297
molecular chaperone DnaJ;
311-379 1.63e-22

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 100.24  E-value: 1.63e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 579332312 311 ADTTYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14297   2 ASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFG 70
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 311-379 2.11e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 99.78  E-value: 2.11e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 579332312 311 ADTTYYDILNVSPDADSSEIKRSYYKLALEYHPDKN--PGDEEakvKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14276   2 NNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINkePGAEE---KYKEVQEAYETLSDPQKRAAYDQYG 69
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
310-377 2.43e-22

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 91.70  E-value: 2.43e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 579332312 310 YADTTYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGD-EEAKVKFQKVNEAYQILSDKEKRAQYDR 377
Cdd:COG2214    2 PDLKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELkALAEELFQRLNEAYEVLSDPERRAEYDR 70
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 313-379 5.61e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 98.76  E-value: 5.61e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 579332312 313 TTYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14284   1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYG 67
PRK14293 PRK14293
molecular chaperone DnaJ;
315-379 4.73e-21

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 95.83  E-value: 4.73e-21
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPD--KNPGDEEakvKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14293   5 YYEILGVSRDADKDELKRAYRRLARKYHPDvnKEPGAED---RFKEINRAYEVLSDPETRARYDQFG 68
PRK14289 PRK14289
molecular chaperone DnaJ;
315-379 5.45e-21

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 95.67  E-value: 5.45e-21
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14289   7 YYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFG 71
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 315-379 2.04e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 93.80  E-value: 2.04e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPgDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14292   4 YYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFG 67
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 311-379 5.05e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 92.75  E-value: 5.05e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 579332312 311 ADTTYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14286   2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFG 70
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
315-379 2.84e-19

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 91.03  E-value: 2.84e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNpGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:NF037946   7 YYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDKYG 70
PRK14279 PRK14279
molecular chaperone DnaJ;
310-376 6.56e-19

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 89.41  E-value: 6.56e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 579332312 310 YADTTYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYD 376
Cdd:PRK14279   6 WVEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYD 72
PRK14280 PRK14280
molecular chaperone DnaJ;
315-379 7.11e-19

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 89.01  E-value: 7.11e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPgDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14280   6 YYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFG 69
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 315-379 7.27e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 88.96  E-value: 7.27e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPgDEEAKVKFQKVNEAYQILSDKEKRAQYDrMG 379
Cdd:PRK14278   5 YYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVD-LG 67
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 315-379 1.14e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 88.67  E-value: 1.14e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPgDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14291   5 YYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYDQFG 68
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 315-379 1.65e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 87.93  E-value: 1.65e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGD-EEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14282   6 YYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENrKEAEQKFKEIQEAYEVLSDPQKRAMYDRFG 71
PRK14295 PRK14295
molecular chaperone DnaJ;
310-376 2.18e-18

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 87.98  E-value: 2.18e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 579332312 310 YADTTYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYD 376
Cdd:PRK14295   6 YIEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYD 72
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 315-379 8.96e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 85.65  E-value: 8.96e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPgDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14283   7 YYEVLGVDRNADKKEIKKAYRKLARKYHPDVSE-EEGAEEKFKEISEAYAVLSDDEKRQRYDQFG 70
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 315-379 1.53e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 83.83  E-value: 1.53e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPD--KNPGDEEakvKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14299   6 YYAILGVPKNASQDEIKKAFKKLARKYHPDvnKSPGAEE---KFKEINEAYTVLSDPEKRRIYDTYG 69
PTZ00475 PTZ00475
RESA-like protein; Provisional
 386-672 3.22e-17

RESA-like protein; Provisional


Pssm-ID: 185654  Cd Length: 282  Bit Score: 82.76  E-value: 3.22e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312 386 MTLIDPSLLFMMLFSSEKLCDYIGVYDLTYMFN-FIMKSMNEEHggglMFNMLGLMNKffdKFKKDQEDREFDLAVSLKY 464
Cdd:PTZ00475   1 MIIIVPFIFFNLIFTSDMMYEYIENTKVPIFVKlFFGKSIFIED----IFYYVGMIMK---EMMEGQNIREEEVAELLKD 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312 465 RLEGYVNGDDDWEKQMENEIEDLLESNFSGHILESVGWIYENVgkcyilkNTTFMGWGARSAKKEYKKRDRMNDKRVFRS 544
Cdd:PTZ00475  74 RLDLYIDNEDEWEKLMENEISMLLKSSFSNFILESIGWTYENV-------SNIFLEEKANSGINKKDIYLKEANERMIRN 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312 545 IFNTMGMIARFVL----------NPPPFMLEGQYMNYNN--MGQIMNNENTSNSCIMCSSSNRgpYGVQNINGLGNYSNE 612
Cdd:PTZ00475 147 SIVLRQCKSRFISiitnyypfkeQNNPFIKQAQYVSSSNyvLDDIINNIDYSIDNIHRAIDNL--YYEHILNLLEEEKNE 224

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312 613 mvvetyirkIFDSLMSTIVTLFLSIIEGTVRTSCKMVLVELDVDKDTLFKRAEGMKLLGQ 672
Cdd:PTZ00475 225 ---------ILEEILRNILKIILCDVETTVRRSAQKVLQNAEGDTNLMLKRAKGLQSLGK 275
PRK14288 PRK14288
molecular chaperone DnaJ;
312-381 7.73e-17

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 82.81  E-value: 7.73e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312 312 DTTYYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMGMQ 381
Cdd:PRK14288   2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKK 71
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 315-384 1.38e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 81.96  E-value: 1.38e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMGMQCVE 384
Cdd:PRK14285   5 YYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFE 74
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 315-403 7.42e-16

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 80.25  E-value: 7.42e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNpGDEEakvKFQKVNEAYQILSDKEKRAQYDRMGMQCVED-MTLIDPSL 393
Cdd:PTZ00037  30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG-GDPE---KFKEISRAYEVLSDPEKRKIYDEYGEEGLEGgEQPADASD 105

                         90
                 ....*....|
gi 579332312 394 LFMMLFSSEK 403
Cdd:PTZ00037 106 LFDLIFGGGR 115
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 315-379 8.17e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 76.59  E-value: 8.17e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDkNPGDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14300   5 YYQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFG 68
PRK10266 PRK10266
curved DNA-binding protein;
315-378 5.60e-14

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 73.32  E-value: 5.60e-14
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPD--KNPgdeEAKVKFQKVNEAYQILSDKEKRAQYDRM 378
Cdd:PRK10266   6 YYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEP---DAEARFKEVAEAWEVLSDEQRRAEYDQL 68
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 315-379 6.31e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 73.81  E-value: 6.31e-14
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPGDE-EAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14290   5 YYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKaEAEEKFKEISEAYEVLSDPQKRRQYDQTG 70
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 315-379 1.47e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 72.73  E-value: 1.47e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDKNPgDEEAKVKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14287   6 YYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFG 69
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
315-368 1.85e-13

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 65.97  E-value: 1.85e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPDK---NPGDEE---AKVKFQKVNEAYQILSD 368
Cdd:COG1076    6 AFELLGLPPDADDAELKRAYRKLQREHHPDRlaaGLPEEEqrlALQKAAAINEAYETLKD 65
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 315-379 1.94e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 66.51  E-value: 1.94e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 579332312 315 YYDILNVSPDADSSEIKRSYYKLALEYHPD--KNPGDEEakvKFQKVNEAYQILSDKEKRAQYDRMG 379
Cdd:PRK14296   6 YYEVLGVSKTASEQEIRQAYRKLAKQYHPDlnKSPDAHD---KMVEINEAADVLLDKDKRKQYDQFG 69
djlA PRK09430
co-chaperone DjlA;
316-372 1.33e-06

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 50.58  E-value: 1.33e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 579332312 316 YDILNVSPDADSSEIKRSYYKLALEYHPDK-----NPGD--EEAKVKFQKVNEAYQILsdKEKR 372
Cdd:PRK09430 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakgLPPEmmEMAKEKAQEIQAAYELI--KKQK 264
hscB PRK03578
Fe-S protein assembly co-chaperone HscB;
326-375 5.98e-05

Fe-S protein assembly co-chaperone HscB;


Pssm-ID: 235133 [Multi-domain]  Cd Length: 176  Bit Score: 44.24  E-value: 5.98e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 579332312 326 DSSEIKRSYYKLALEYHPDK--NPGDEEAKVKFQ---KVNEAYQILSDKEKRAQY 375
Cdd:PRK03578  21 DEAALDAAYRTVQAQVHPDRfaAAGDAEKRVAMQwatRANEAYQTLRDPLKRARY 75
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 325-376 2.16e-04

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 44.25  E-value: 2.16e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 579332312 325 ADSSEIKRSYYKLALEYHPDK-----NPGDEEAkvkFQKVNEAYQILSDKEKRAQYD 376
Cdd:COG5269   58 AIPPQILKAHKKKVYKYHPDKtaaggNKGCDEF---FKLIQKAREVLGDRKLRLQYD 111
hscB TIGR00714
Fe-S protein assembly co-chaperone HscB; This model describes the small subunit, Hsc20 (20K ...
 326-375 1.28e-03

Fe-S protein assembly co-chaperone HscB; This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock. [Protein fate, Protein folding and stabilization]


Pssm-ID: 211601 [Multi-domain]  Cd Length: 155  Bit Score: 39.87  E-value: 1.28e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 579332312  326 DSSEIKRSYYKLALEYHPDKNPGDEEAKVKFQK---VNEAYQILSDKEKRAQY 375
Cdd:TIGR00714   4 DQSRLRKRYRQLQAQYHPDASGMAQEQLAASQQsttLNQAYHTLKDPLRRAEY 56
hscB PRK00294
co-chaperone HscB; Provisional
 315-406 1.45e-03

co-chaperone HscB; Provisional


Pssm-ID: 166894 [Multi-domain]  Cd Length: 173  Bit Score: 40.22  E-value: 1.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 579332312 315 YYDILNVSPD--ADSSEIKRSYYKLALEYHPDK--NPGDEEAKVKFQK---VNEAYQILSDKEKRAQY--DRMGMQCVED 385
Cdd:PRK00294   6 HFALFDLQPSfrLDLDQLATRYRELAREVHPDRfaDAPEREQRLALERsasLNEAYQTLKSPPRRARYllALSGHEVPLE 85

                         90       100
                 ....*....|....*....|.
gi 579332312 386 MTLIDPSLLFMMLFSSEKLCD 406
Cdd:PRK00294  86 VTVHDPEFLLQQMQLREELEE 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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