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Conserved domains on  [gi|578606649|gb|EUO41860|]
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HK97 gp10 family phage protein [Staphylococcus aureus M1097]

Protein Classification

HK97 gp10 family phage protein( domain architecture ID 10522339)

HK97 gp10 family phage protein similar to Bacillus subtilis phage-like element PBSX protein XkdI

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
HK97-gp10_like pfam04883
Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the ...
 10-82 3.73e-07

Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the caudovirales. It may be a tail component.


:

Pssm-ID: 428172  Cd Length: 80  Bit Score: 45.02  E-value: 3.73e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 578606649   10 DLVKELENYERDMERWVKRGIAKTTAKIHNTIISLMPVDT-GYLRESVT-----MDFKDGGFTGVINIGSEYAIYVNYG 82
Cdd:pfam04883   2 KLIKKLEKLSKVAEKAAKKALKAAAAEVADEAKKNAPVDTtGKLRDSIKvgvnlVKEKGGELVVEVGSNAEYAHLVEFG 80
 
Name Accession Description Interval E-value
HK97-gp10_like pfam04883
Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the ...
 10-82 3.73e-07

Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the caudovirales. It may be a tail component.


Pssm-ID: 428172  Cd Length: 80  Bit Score: 45.02  E-value: 3.73e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 578606649   10 DLVKELENYERDMERWVKRGIAKTTAKIHNTIISLMPVDT-GYLRESVT-----MDFKDGGFTGVINIGSEYAIYVNYG 82
Cdd:pfam04883   2 KLIKKLEKLSKVAEKAAKKALKAAAAEVADEAKKNAPVDTtGKLRDSIKvgvnlVKEKGGELVVEVGSNAEYAHLVEFG 80
phge_HK97_gp10 TIGR01725
phage protein, HK97 gp10 family; This model represents an uncharacterized, highly divergent ...
 10-83 2.94e-03

phage protein, HK97 gp10 family; This model represents an uncharacterized, highly divergent bacteriophage family. The family includes gp10 from HK022 and HK97. It appears related to TIGR01635, a phage morphogenesis family believed to be involved in tail completion. [Mobile and extrachromosomal element functions, Prophage functions]


Pssm-ID: 273775  Cd Length: 119  Bit Score: 35.47  E-value: 2.94e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578606649   10 DLVKELENYERDMERWVKRGIAKTTAK-IHNTIISLMPVDTGYLRESVTMDFKDGGFTGV--INIGSE----YAIYVNYG 82
Cdd:TIGR01725   6 ELLQKLEKLGKKVDKEKVRKALKAGANvIRAKLKSNAPVSKGKKHGSLRDSIVKQKDNGVlsVTVGPGktawYARFLEFG 85


                  .
gi 578606649   83 T 83
Cdd:TIGR01725  86 T 86
 
Name Accession Description Interval E-value
HK97-gp10_like pfam04883
Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the ...
 10-82 3.73e-07

Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the caudovirales. It may be a tail component.


Pssm-ID: 428172  Cd Length: 80  Bit Score: 45.02  E-value: 3.73e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 578606649   10 DLVKELENYERDMERWVKRGIAKTTAKIHNTIISLMPVDT-GYLRESVT-----MDFKDGGFTGVINIGSEYAIYVNYG 82
Cdd:pfam04883   2 KLIKKLEKLSKVAEKAAKKALKAAAAEVADEAKKNAPVDTtGKLRDSIKvgvnlVKEKGGELVVEVGSNAEYAHLVEFG 80
phge_HK97_gp10 TIGR01725
phage protein, HK97 gp10 family; This model represents an uncharacterized, highly divergent ...
 10-83 2.94e-03

phage protein, HK97 gp10 family; This model represents an uncharacterized, highly divergent bacteriophage family. The family includes gp10 from HK022 and HK97. It appears related to TIGR01635, a phage morphogenesis family believed to be involved in tail completion. [Mobile and extrachromosomal element functions, Prophage functions]


Pssm-ID: 273775  Cd Length: 119  Bit Score: 35.47  E-value: 2.94e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578606649   10 DLVKELENYERDMERWVKRGIAKTTAK-IHNTIISLMPVDTGYLRESVTMDFKDGGFTGV--INIGSE----YAIYVNYG 82
Cdd:TIGR01725   6 ELLQKLEKLGKKVDKEKVRKALKAGANvIRAKLKSNAPVSKGKKHGSLRDSIVKQKDNGVlsVTVGPGktawYARFLEFG 85


                  .
gi 578606649   83 T 83
Cdd:TIGR01725  86 T 86
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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