fumarate reductase subunit C [Enterobacter sp. BIDMC 27]
fumarate reductase subunit C( domain architecture ID 10012241)
quinol:fumarate reductase transmembrane subunit C, together with the D subunit, acts to anchor the catalytic components of fumarate reductase to the cytoplasmic membrane
List of domain hits
Name | Accession | Description | Interval | E-value | |||
PRK04987 | PRK04987 | fumarate reductase subunit FrdC; |
1-130 | 1.42e-77 | |||
fumarate reductase subunit FrdC; : Pssm-ID: 235327 Cd Length: 130 Bit Score: 225.25 E-value: 1.42e-77
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Name | Accession | Description | Interval | E-value | |||
PRK04987 | PRK04987 | fumarate reductase subunit FrdC; |
1-130 | 1.42e-77 | |||
fumarate reductase subunit FrdC; Pssm-ID: 235327 Cd Length: 130 Bit Score: 225.25 E-value: 1.42e-77
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FrdC | COG3029 | Fumarate reductase subunit C [Energy production and conversion]; |
2-129 | 1.72e-65 | |||
Fumarate reductase subunit C [Energy production and conversion]; Pssm-ID: 442265 Cd Length: 128 Bit Score: 194.73 E-value: 1.72e-65
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QFR_TypeD_subunitC | cd00546 | Quinol:fumarate reductase (QFR) Type D subfamily, 15kD hydrophobic subunit C; QFR couples the ... |
5-128 | 3.43e-63 | |||
Quinol:fumarate reductase (QFR) Type D subfamily, 15kD hydrophobic subunit C; QFR couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, the opposite reaction to that catalyzed by the related protein, succinate:quinine oxidoreductase (SQR). QFRs oxidize low potential quinols such as menaquinol and are involved in anaerobic respiration with fumarate as the terminal electron acceptor. SQR and QFR share a common subunit arrangement, composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type D as they contain two transmembrane subunits (C and D) and no heme groups. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron donor (quinol). The quinone binding site resides in the transmembrane subunits. Pssm-ID: 238306 Cd Length: 124 Bit Score: 188.69 E-value: 3.43e-63
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Fumarate_red_C | pfam02300 | Fumarate reductase subunit C; Fumarate reductase is a membrane-bound flavoenzyme consisting of ... |
3-129 | 1.65e-62 | |||
Fumarate reductase subunit C; Fumarate reductase is a membrane-bound flavoenzyme consisting of four subunits, A-B. A and B comprise the membrane-extrinsic catalytic domain and C and D link the catalytic centres to the electron-transport chain. This family consists of the 15kD hydrophobic subunit C. Pssm-ID: 426709 Cd Length: 127 Bit Score: 187.07 E-value: 1.65e-62
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Name | Accession | Description | Interval | E-value | |||
PRK04987 | PRK04987 | fumarate reductase subunit FrdC; |
1-130 | 1.42e-77 | |||
fumarate reductase subunit FrdC; Pssm-ID: 235327 Cd Length: 130 Bit Score: 225.25 E-value: 1.42e-77
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FrdC | COG3029 | Fumarate reductase subunit C [Energy production and conversion]; |
2-129 | 1.72e-65 | |||
Fumarate reductase subunit C [Energy production and conversion]; Pssm-ID: 442265 Cd Length: 128 Bit Score: 194.73 E-value: 1.72e-65
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QFR_TypeD_subunitC | cd00546 | Quinol:fumarate reductase (QFR) Type D subfamily, 15kD hydrophobic subunit C; QFR couples the ... |
5-128 | 3.43e-63 | |||
Quinol:fumarate reductase (QFR) Type D subfamily, 15kD hydrophobic subunit C; QFR couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, the opposite reaction to that catalyzed by the related protein, succinate:quinine oxidoreductase (SQR). QFRs oxidize low potential quinols such as menaquinol and are involved in anaerobic respiration with fumarate as the terminal electron acceptor. SQR and QFR share a common subunit arrangement, composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type D as they contain two transmembrane subunits (C and D) and no heme groups. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron donor (quinol). The quinone binding site resides in the transmembrane subunits. Pssm-ID: 238306 Cd Length: 124 Bit Score: 188.69 E-value: 3.43e-63
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Fumarate_red_C | pfam02300 | Fumarate reductase subunit C; Fumarate reductase is a membrane-bound flavoenzyme consisting of ... |
3-129 | 1.65e-62 | |||
Fumarate reductase subunit C; Fumarate reductase is a membrane-bound flavoenzyme consisting of four subunits, A-B. A and B comprise the membrane-extrinsic catalytic domain and C and D link the catalytic centres to the electron-transport chain. This family consists of the 15kD hydrophobic subunit C. Pssm-ID: 426709 Cd Length: 127 Bit Score: 187.07 E-value: 1.65e-62
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PRK13603 | PRK13603 | fumarate reductase subunit C; Provisional |
7-129 | 1.67e-16 | |||
fumarate reductase subunit C; Provisional Pssm-ID: 172166 Cd Length: 126 Bit Score: 70.08 E-value: 1.67e-16
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SQR_QFR_TM | cd03493 | Succinate:quinone oxidoreductase (SQR) and Quinol:fumarate reductase (QFR) family, ... |
27-126 | 2.45e-06 | |||
Succinate:quinone oxidoreductase (SQR) and Quinol:fumarate reductase (QFR) family, transmembrane subunits; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol, while QFR catalyzes the reverse reaction. SQR, also called succinate dehydrogenase or Complex II, is part of the citric acid cycle and the aerobic respiratory chain, while QFR is involved in anaerobic respiration with fumarate as the terminal electron acceptor. SQRs may reduce either high or low potential quinones while QFRs oxidize only low potential quinols. SQR and QFR share a common subunit arrangement, composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit(s) containing the electron donor/acceptor (quinol or quinone). The reversible reduction of quinone is an essential feature of respiration, allowing the transfer of electrons between respiratory complexes. SQRs and QFRs can be classified into five types (A-E) according to the number of their hydrophobic subunits and heme groups. This classification is consistent with the characteristics and phylogeny of the catalytic and iron-sulfur subunits. Type E proteins, e.g. non-classical archael SQRs, contain atypical transmembrane subunits and are not included in this hierarchy. The heme and quinone binding sites reside in the transmembrane subunits. Although succinate oxidation and fumarate reduction are carried out by separate enzymes in most organisms, some bifunctional enzymes that exhibit both SQR and QFR activities exist. Pssm-ID: 239573 Cd Length: 98 Bit Score: 43.04 E-value: 2.45e-06
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Blast search parameters | ||||
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