|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10565 |
PRK10565 |
putative carbohydrate kinase; Provisional |
1-502 |
0e+00 |
|
putative carbohydrate kinase; Provisional
Pssm-ID: 182554 [Multi-domain] Cd Length: 508 Bit Score: 1003.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 1 MKKNPASIPHSIWHADDLRRAEKEAADSLGITLYELMLRAGEAAFNVARSAYPQAAHWMILCGHGNNGGDGYVVARLAVA 80
Cdd:PRK10565 6 MKKNPVSIPHSVWPADDIRRGEREAADALGLTLYELMLRAGEAAFQVARSAYPDARHWLVLCGHGNNGGDGYVVARLAQA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 81 AGIRVTLLALESDKPLPEEASGAREAWLNAGGVIHAPDIVWPEEVDLIVDGLLGTGLRSAPRENIAALIEHANRHSAPVV 160
Cdd:PRK10565 86 AGIDVTLLAQESDKPLPEEAALAREAWLNAGGEIHAADIVWPESVDLIVDALLGTGLRQAPREPYAALIDQANAHPAPVV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 161 ALDIPSGLIAQTGATPGAVIQAAHTVTFIALKPGLLTGKARDVVGVLHHHALGLESWLSGQETHLARFDASQLAAWLPPR 240
Cdd:PRK10565 166 ALDIPSGLLAETGATPGAVINADHTVTFIALKPGLLTGKARDVVGQLHFDSLGLDSWLAGQEAPIQRFDAEQLSQWLKPR 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 241 RPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRSGAGLVRVLTRIENIAPIVTARPELMVHELTPQSLEESLEWADVVV 320
Cdd:PRK10565 246 RPTSHKGDHGRLLIIGGDHGTAGAIRMAGEAALRSGAGLVRVLTRSENIAPLLTARPELMVHELTPDSLEESLEWADVVV 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 321 IGPGLGQQAWGKQALQKVENFRKPMLWDADALNLLAINPDKRHNRILTPHPGEAARLLNCSVAEIESDRLLSAQRLVKRY 400
Cdd:PRK10565 326 IGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIESDRLLSARRLVKRY 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 401 GGVAVLKGAGTVVASDETQ-GIIDAGNAGMASGGMGDVLSGIIGALLGQKLPLYDAACAGCVAHGVAADKLAARYGTRGM 479
Cdd:PRK10565 406 GGVVVLKGAGTVIAAEPDAlAIIDVGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVAHGAAADVLAARFGTRGM 485
|
490 500
....*....|....*....|...
gi 578181816 480 LATDLFCTLRRVVNPDVIDVEND 502
Cdd:PRK10565 486 LATDLFSTLQRIVNPEVIDKNHD 508
|
|
| Nnr2 |
COG0063 |
NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate dehydratase domain [Nucleotide transport ... |
227-494 |
3.85e-111 |
|
NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate dehydratase domain [Nucleotide transport and metabolism];
Pssm-ID: 439833 Cd Length: 280 Bit Score: 330.55 E-value: 3.85e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 227 RFDASQLAAWLPPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRSGAGLVRVLTRIENIAPIVTARPELMVHEL-T 305
Cdd:COG0063 4 LLTPADLRALLPPRPPDSHKGSRGHVLVIGGSRGYPGAAVLAARAALRAGAGLVTVAVPESAAPAVAAALPELMVIPLpE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 306 PQSLEESLEWADVVVIGPGLGQQAWGKQALQKV-ENFRKPMLWDADALNLLAINPD----KRHNRILTPHPGEAARLLNC 380
Cdd:COG0063 84 EDELLELLERADAVVIGPGLGRDEETRELLRALlEAADKPLVLDADALNLLAEDPEllaaLPAPTVLTPHPGEFARLLGC 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 381 SVAEIESDRLLSAQRLVKRYGGVAVLKGAGTVVAS-DETQGIIDAGNAGMASGGMGDVLSGIIGALLGQKLPLYDAACAG 459
Cdd:COG0063 164 SVAEIQADRLEAAREAAKRYGAVVVLKGAGTVIAApDGRVYINPTGNPGLATAGSGDVLAGIIAGLLAQGLDPFEAAAAG 243
|
250 260 270
....*....|....*....|....*....|....*
gi 578181816 460 CVAHGVAADKLAARYGtRGMLATDLFCTLRRVVNP 494
Cdd:COG0063 244 VYLHGLAGDLAAEERG-RGLLASDLIEALPAALRE 277
|
|
| yjeF_cterm |
TIGR00196 |
yjeF C-terminal region, hydroxyethylthiazole kinase-related; E. coli yjeF has full-length ... |
227-494 |
8.90e-109 |
|
yjeF C-terminal region, hydroxyethylthiazole kinase-related; E. coli yjeF has full-length orthologs in a number of species, all of unknown function. However, yeast YNL200C is homologous and corresponds to the N-terminal region while yeast YKL151C and B. subtilis yxkO correspond to this C-terminal region only. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis. [Unknown function, General]
Pssm-ID: 272955 Cd Length: 270 Bit Score: 324.34 E-value: 8.90e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 227 RFDASQLAAWLPPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRSGAGLVRVLTRIENIAPIVTARPELMVHEL-- 304
Cdd:TIGR00196 2 TFLGEGDLLTLPLRDPNSHKGQYGRVLIIGGSDDYSGAPLLAALAALRAGAGLVTVAAPENVITLINSVSPELIVHRLmw 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 305 TPQSLEESLEWADVVVIGPGLGQQAWGKQALQKVENFRKPMLWDADALNLLAINPDKRHNRILTPHPGEAARLLNcsVAE 384
Cdd:TIGR00196 82 KVDEDEELLERYDVVVIGPGLGQDPSFKKAVEEVLELDKPVVLDADALNLLTYNQKREGEVILTPHPGEFKRLLG--VNE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 385 IESDRLLSAQRLVKRYGGVAVLKGAGTVVASDETQ-GIIDAGNAGMASGGMGDVLSGIIGALLGQKLPLYDAACAGCVAH 463
Cdd:TIGR00196 160 IQGDRLEAAQDIAQKLQAVVVLKGAADVIAAPDGDlWINKTGNAALAKGGTGDVLAGLIGGLLAQNLDPFDAACNAAFAH 239
|
250 260 270
....*....|....*....|....*....|.
gi 578181816 464 GVAADKLAARYGTRGMLATDLFCTLRRVVNP 494
Cdd:TIGR00196 240 GLAGDLALKNHGAYGLTALDLIEKIPRVCKR 270
|
|
| YXKO-related |
cd01171 |
B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of ... |
242-484 |
4.06e-90 |
|
B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.
Pssm-ID: 238576 Cd Length: 254 Bit Score: 275.65 E-value: 4.06e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 242 PTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRSGAGLVRVLTRIENIAPIVTARPELMVHELTPQS---LEESLEWADV 318
Cdd:cd01171 1 PDSHKGSRGRVLVIGGSRGYTGAAYLAALAALRAGAGLVTVATPPEAAAVIKSYSPELMVHPLLETDieeLLELLERADA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 319 VVIGPGLGQQAWGKQALQKVENFRKPMLWDADALNLLAINPDKRH---NRILTPHPGEAARLLNCSVAEIESDRLLSAQR 395
Cdd:cd01171 81 VVIGPGLGRDEEAAEILEKALAKDKPLVLDADALNLLADEPSLIKrygPVVLTPHPGEFARLLGALVEEIQADRLAAARE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 396 LVKRYGGVAVLKGAGTVVAS-DETQGIIDAGNAGMASGGMGDVLSGIIGALLGQKLPLYDAACAGCVAHGVAADKLAARY 474
Cdd:cd01171 161 AAAKLGATVVLKGAVTVIADpDGRVYVNPTGNPGLATGGSGDVLAGIIAALLAQGLSPLEAAALAVYLHGLAGDLAAKKK 240
|
250
....*....|
gi 578181816 475 GTRGMLATDL 484
Cdd:cd01171 241 GAGLTAADLV 250
|
|
| Carb_kinase |
pfam01256 |
Carbohydrate kinase; This family is related to pfam02110 and pfam00294 implying that it also ... |
252-490 |
6.18e-85 |
|
Carbohydrate kinase; This family is related to pfam02110 and pfam00294 implying that it also is a carbohydrate kinase. (personal obs Yeats C).
Pssm-ID: 396007 Cd Length: 242 Bit Score: 261.91 E-value: 6.18e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 252 LVIIGGDHGTAGAIRMTGEAALRSGAGLVRVLTRIENIAPIVTARPELMVHELTPQSLE-ESLEWADVVVIGPGLGQQAW 330
Cdd:pfam01256 1 VLVIGGSKDYTGAPLLAALAALRSGAGLVSVATDSEAIAVLKSPLPEVMVHPLPETSSIlEKLSRYDAVVIGPGLGRDEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 331 GKQALQKVENFRKPMLWDADALNLLAIN---PDKRHNRILTPHPGEAARLLNCSVAeIESDRLLSAQRLVKRYGGVAVLK 407
Cdd:pfam01256 81 GKAALEEVLAKDCPLVIDADALNLLAINnekPAREGPTVLTPHPGEFERLCGLAGI-LGDDRLEAARELAQKLNGTILLK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 408 GAGTVVASDETQ-GIIDAGNAGMASGGMGDVLSGIIGALLGQKLPLYDAACAGCVAHGVAADKLAARYGtRGMLATDLFC 486
Cdd:pfam01256 160 GNVTVIAAPGGEvWINSTGNSALAKGGSGDVLAGLIGGLLAQNEDPYDAAIAAAWLHGAASDLAAENHG-VYMLPTLLSK 238
|
....
gi 578181816 487 TLRR 490
Cdd:pfam01256 239 IIPR 242
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10565 |
PRK10565 |
putative carbohydrate kinase; Provisional |
1-502 |
0e+00 |
|
putative carbohydrate kinase; Provisional
Pssm-ID: 182554 [Multi-domain] Cd Length: 508 Bit Score: 1003.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 1 MKKNPASIPHSIWHADDLRRAEKEAADSLGITLYELMLRAGEAAFNVARSAYPQAAHWMILCGHGNNGGDGYVVARLAVA 80
Cdd:PRK10565 6 MKKNPVSIPHSVWPADDIRRGEREAADALGLTLYELMLRAGEAAFQVARSAYPDARHWLVLCGHGNNGGDGYVVARLAQA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 81 AGIRVTLLALESDKPLPEEASGAREAWLNAGGVIHAPDIVWPEEVDLIVDGLLGTGLRSAPRENIAALIEHANRHSAPVV 160
Cdd:PRK10565 86 AGIDVTLLAQESDKPLPEEAALAREAWLNAGGEIHAADIVWPESVDLIVDALLGTGLRQAPREPYAALIDQANAHPAPVV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 161 ALDIPSGLIAQTGATPGAVIQAAHTVTFIALKPGLLTGKARDVVGVLHHHALGLESWLSGQETHLARFDASQLAAWLPPR 240
Cdd:PRK10565 166 ALDIPSGLLAETGATPGAVINADHTVTFIALKPGLLTGKARDVVGQLHFDSLGLDSWLAGQEAPIQRFDAEQLSQWLKPR 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 241 RPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRSGAGLVRVLTRIENIAPIVTARPELMVHELTPQSLEESLEWADVVV 320
Cdd:PRK10565 246 RPTSHKGDHGRLLIIGGDHGTAGAIRMAGEAALRSGAGLVRVLTRSENIAPLLTARPELMVHELTPDSLEESLEWADVVV 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 321 IGPGLGQQAWGKQALQKVENFRKPMLWDADALNLLAINPDKRHNRILTPHPGEAARLLNCSVAEIESDRLLSAQRLVKRY 400
Cdd:PRK10565 326 IGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIESDRLLSARRLVKRY 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 401 GGVAVLKGAGTVVASDETQ-GIIDAGNAGMASGGMGDVLSGIIGALLGQKLPLYDAACAGCVAHGVAADKLAARYGTRGM 479
Cdd:PRK10565 406 GGVVVLKGAGTVIAAEPDAlAIIDVGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVAHGAAADVLAARFGTRGM 485
|
490 500
....*....|....*....|...
gi 578181816 480 LATDLFCTLRRVVNPDVIDVEND 502
Cdd:PRK10565 486 LATDLFSTLQRIVNPEVIDKNHD 508
|
|
| Nnr2 |
COG0063 |
NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate dehydratase domain [Nucleotide transport ... |
227-494 |
3.85e-111 |
|
NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate dehydratase domain [Nucleotide transport and metabolism];
Pssm-ID: 439833 Cd Length: 280 Bit Score: 330.55 E-value: 3.85e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 227 RFDASQLAAWLPPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRSGAGLVRVLTRIENIAPIVTARPELMVHEL-T 305
Cdd:COG0063 4 LLTPADLRALLPPRPPDSHKGSRGHVLVIGGSRGYPGAAVLAARAALRAGAGLVTVAVPESAAPAVAAALPELMVIPLpE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 306 PQSLEESLEWADVVVIGPGLGQQAWGKQALQKV-ENFRKPMLWDADALNLLAINPD----KRHNRILTPHPGEAARLLNC 380
Cdd:COG0063 84 EDELLELLERADAVVIGPGLGRDEETRELLRALlEAADKPLVLDADALNLLAEDPEllaaLPAPTVLTPHPGEFARLLGC 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 381 SVAEIESDRLLSAQRLVKRYGGVAVLKGAGTVVAS-DETQGIIDAGNAGMASGGMGDVLSGIIGALLGQKLPLYDAACAG 459
Cdd:COG0063 164 SVAEIQADRLEAAREAAKRYGAVVVLKGAGTVIAApDGRVYINPTGNPGLATAGSGDVLAGIIAGLLAQGLDPFEAAAAG 243
|
250 260 270
....*....|....*....|....*....|....*
gi 578181816 460 CVAHGVAADKLAARYGtRGMLATDLFCTLRRVVNP 494
Cdd:COG0063 244 VYLHGLAGDLAAEERG-RGLLASDLIEALPAALRE 277
|
|
| yjeF_cterm |
TIGR00196 |
yjeF C-terminal region, hydroxyethylthiazole kinase-related; E. coli yjeF has full-length ... |
227-494 |
8.90e-109 |
|
yjeF C-terminal region, hydroxyethylthiazole kinase-related; E. coli yjeF has full-length orthologs in a number of species, all of unknown function. However, yeast YNL200C is homologous and corresponds to the N-terminal region while yeast YKL151C and B. subtilis yxkO correspond to this C-terminal region only. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis. [Unknown function, General]
Pssm-ID: 272955 Cd Length: 270 Bit Score: 324.34 E-value: 8.90e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 227 RFDASQLAAWLPPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRSGAGLVRVLTRIENIAPIVTARPELMVHEL-- 304
Cdd:TIGR00196 2 TFLGEGDLLTLPLRDPNSHKGQYGRVLIIGGSDDYSGAPLLAALAALRAGAGLVTVAAPENVITLINSVSPELIVHRLmw 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 305 TPQSLEESLEWADVVVIGPGLGQQAWGKQALQKVENFRKPMLWDADALNLLAINPDKRHNRILTPHPGEAARLLNcsVAE 384
Cdd:TIGR00196 82 KVDEDEELLERYDVVVIGPGLGQDPSFKKAVEEVLELDKPVVLDADALNLLTYNQKREGEVILTPHPGEFKRLLG--VNE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 385 IESDRLLSAQRLVKRYGGVAVLKGAGTVVASDETQ-GIIDAGNAGMASGGMGDVLSGIIGALLGQKLPLYDAACAGCVAH 463
Cdd:TIGR00196 160 IQGDRLEAAQDIAQKLQAVVVLKGAADVIAAPDGDlWINKTGNAALAKGGTGDVLAGLIGGLLAQNLDPFDAACNAAFAH 239
|
250 260 270
....*....|....*....|....*....|.
gi 578181816 464 GVAADKLAARYGTRGMLATDLFCTLRRVVNP 494
Cdd:TIGR00196 240 GLAGDLALKNHGAYGLTALDLIEKIPRVCKR 270
|
|
| Nnr1 |
COG0062 |
NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain [Nucleotide transport and ... |
12-502 |
1.66e-105 |
|
NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain [Nucleotide transport and metabolism];
Pssm-ID: 439832 [Multi-domain] Cd Length: 499 Bit Score: 324.13 E-value: 1.66e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 12 IWHADDLRRAEKEAADSLGITLYELMLRAGEAAFNVARSAYP-QAAHWMILCGHGNNGGDGYVVARLAVAAGIRVTLLAL 90
Cdd:COG0062 3 LLTAAQMRALDRAAIEALGIPGLVLMERAGRAVARAIRRRFPsAARRVLVLCGPGNNGGDGLVAARLLAEAGYNVTVFLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 91 ESDKPLPEEASGAREAWLNAGGVIH--APDIVWPEEVDLIVDGLLGTGLRSAPRENIAALIEHANRHSAPVVALDIPSGL 168
Cdd:COG0062 83 GDPEKLSGDAAANLERLKAAGIPILelDDELPELAEADLIVDALFGTGLSRPLRGPYAELIEAINASGAPVLAVDIPSGL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 169 IAQTGATPGAVIQAAHTVTFIALKPGLLTGKARDVVGVLHHHALGLESWLSGQETHLARFDASQLAAWLPPRRPTSHKGD 248
Cdd:COG0062 163 DADTGEVLGAAVRADLTVTFGAPKPGLLLGPGRDYCGELVVADIGIGIPAAAEAPAALLLLADLLALLLPPRRRSHHKGG 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 249 HGRLVIIGGDHGTAGAIRMTGEAALRSGAGLVRVLTRIENIAPIVTARPELMVHELTPQSLEESLEWA-DVVVIGPGLGQ 327
Cdd:COG0062 243 GGGVLVIGGGGGGGGAAAAAAAAAAAAGGGLVVLAVPPAAAAALLAALPEAMALALDDDEELLLLLAAaVVVAGGGGGGG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 328 QAWGKQALQKVENFRKPMLWDADALNLLAINPDKRHNRILTPHPGEAARLLNCSVAEIESDRLLSAQRLVKRYGGVAVLK 407
Cdd:COG0062 323 GGAGGGLLLLLLLLLLLLVLLAAALLLLLALAAALLLLLLLPPPLAAALLLLRLLTELLELRAAAAALLAAAAAAAAVAA 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 408 GAGTVVASDETQGIIDAGNAGMASGGMGDVLSGIIGALLGQKLPLYDAACAGCVAHGVAADKLAARYGTRGMLATDLFCT 487
Cdd:COG0062 403 AAVVAGAAGVVVVAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGLLAGAAAAAAAAAAAAAAAAAAAAAAAALAAALLAAA 482
|
490
....*....|....*
gi 578181816 488 LRRVVNPDVIDVEND 502
Cdd:COG0062 483 AALIALLLAAALLLL 497
|
|
| YXKO-related |
cd01171 |
B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of ... |
242-484 |
4.06e-90 |
|
B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.
Pssm-ID: 238576 Cd Length: 254 Bit Score: 275.65 E-value: 4.06e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 242 PTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRSGAGLVRVLTRIENIAPIVTARPELMVHELTPQS---LEESLEWADV 318
Cdd:cd01171 1 PDSHKGSRGRVLVIGGSRGYTGAAYLAALAALRAGAGLVTVATPPEAAAVIKSYSPELMVHPLLETDieeLLELLERADA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 319 VVIGPGLGQQAWGKQALQKVENFRKPMLWDADALNLLAINPDKRH---NRILTPHPGEAARLLNCSVAEIESDRLLSAQR 395
Cdd:cd01171 81 VVIGPGLGRDEEAAEILEKALAKDKPLVLDADALNLLADEPSLIKrygPVVLTPHPGEFARLLGALVEEIQADRLAAARE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 396 LVKRYGGVAVLKGAGTVVAS-DETQGIIDAGNAGMASGGMGDVLSGIIGALLGQKLPLYDAACAGCVAHGVAADKLAARY 474
Cdd:cd01171 161 AAAKLGATVVLKGAVTVIADpDGRVYVNPTGNPGLATGGSGDVLAGIIAALLAQGLSPLEAAALAVYLHGLAGDLAAKKK 240
|
250
....*....|
gi 578181816 475 GTRGMLATDL 484
Cdd:cd01171 241 GAGLTAADLV 250
|
|
| Carb_kinase |
pfam01256 |
Carbohydrate kinase; This family is related to pfam02110 and pfam00294 implying that it also ... |
252-490 |
6.18e-85 |
|
Carbohydrate kinase; This family is related to pfam02110 and pfam00294 implying that it also is a carbohydrate kinase. (personal obs Yeats C).
Pssm-ID: 396007 Cd Length: 242 Bit Score: 261.91 E-value: 6.18e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 252 LVIIGGDHGTAGAIRMTGEAALRSGAGLVRVLTRIENIAPIVTARPELMVHELTPQSLE-ESLEWADVVVIGPGLGQQAW 330
Cdd:pfam01256 1 VLVIGGSKDYTGAPLLAALAALRSGAGLVSVATDSEAIAVLKSPLPEVMVHPLPETSSIlEKLSRYDAVVIGPGLGRDEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 331 GKQALQKVENFRKPMLWDADALNLLAIN---PDKRHNRILTPHPGEAARLLNCSVAeIESDRLLSAQRLVKRYGGVAVLK 407
Cdd:pfam01256 81 GKAALEEVLAKDCPLVIDADALNLLAINnekPAREGPTVLTPHPGEFERLCGLAGI-LGDDRLEAARELAQKLNGTILLK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 408 GAGTVVASDETQ-GIIDAGNAGMASGGMGDVLSGIIGALLGQKLPLYDAACAGCVAHGVAADKLAARYGtRGMLATDLFC 486
Cdd:pfam01256 160 GNVTVIAAPGGEvWINSTGNSALAKGGSGDVLAGLIGGLLAQNEDPYDAAIAAAWLHGAASDLAAENHG-VYMLPTLLSK 238
|
....
gi 578181816 487 TLRR 490
Cdd:pfam01256 239 IIPR 242
|
|
| yjeF_nterm |
TIGR00197 |
yjeF N-terminal region; The protein region corresponding to this model shows no clear homology ... |
13-214 |
4.40e-71 |
|
yjeF N-terminal region; The protein region corresponding to this model shows no clear homology to any protein of known function. This model is built on yeast protein YNL200C and the N-terminal regions of E. coli yjeF and its orthologs in various species. The C-terminal region of yjeF and its orthologs shows similarity to hydroxyethylthiazole kinase (thiM) and other enzymes involved in thiamine biosynthesis. Yeast YKL151C and B. subtilis yxkO match the yjeF C-terminal domain but lack this region. [Unknown function, General]
Pssm-ID: 272956 [Multi-domain] Cd Length: 205 Bit Score: 224.98 E-value: 4.40e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 13 WHADDLRRAEKEAADSLGITLYELMLRAGEAAFNVARSAYPQAAHWMILCGHGNNGGDGYVVARLAVAAGIRVTLLALES 92
Cdd:TIGR00197 3 VVSPKDMAIDKENAEYLGLTLDLLMENAGKAVAQAVLQAYPLAGHVIIFCGPGNNGGDGFVVARHLKGFGVEVFLLKKEK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 93 DKPLPEEASGAREAWLNAGGVIHAPDIVWPEEVDLIVDGLLGTGLRSAPRENIAALIEHANRHSAPVVALDIPSGLIAQT 172
Cdd:TIGR00197 83 RIECTEQAEVNLKALKVGGISIDEGNLVKPEDCDVIIDAILGTGFKGKLREPFKTIVESINELPAPIVSVDIPSGLDVDT 162
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 578181816 173 GATPGAVIQAAHTVTFIALKPGLLTGKArDVVGVLHHHALGL 214
Cdd:TIGR00197 163 GAIEGPAVNADLTITFHAIKPCLLSDRA-DVTGELKVGGIGI 203
|
|
| YjeF_N |
pfam03853 |
YjeF-related protein N-terminus; YjeF-N domain is a novel version of the Rossmann fold with a ... |
34-194 |
1.34e-47 |
|
YjeF-related protein N-terminus; YjeF-N domain is a novel version of the Rossmann fold with a set of catalytic residues and structural features that are different from the conventional dehydrogenases. YjeF-N domain is fused to Ribokinases in bacteria (YjeF), where they may be phosphatases, and to divergent Sm and the FDF domain in eukaryotes (Dcp3p and FLJ21128), where they may be involved in decapping and catalyze hydrolytic RNA-processing reactions.
Pssm-ID: 427546 [Multi-domain] Cd Length: 168 Bit Score: 162.40 E-value: 1.34e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 34 YELMLRAGEAAFNVARSAY-PQAAHWMILCGHGNNGGDGYVVARLAVAAGIRVTLLALESDKPLPEEASGAREAWLNAGG 112
Cdd:pfam03853 2 AVLMENAGRAAARVLKALLsPAGPKVLILCGPGNNGGDGLAAARHLANRGAKVTVLLLGPEEKLSEDARRQLDLFKKLGG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 113 VIHAPDIV-----WPEEVDLIVDGLLGTGLRSAPRENIAALIEHANRHSAPVVALDIPSGLIAQTGATPGAVIQAAHTVT 187
Cdd:pfam03853 82 KIVTDNPDedlekLLSPVDLIIDALLGTGLSGPLRGEYAALIEWINQSGAPVLAVDIPSGLDADTGAVLGTAVRADHTVT 161
|
....*..
gi 578181816 188 FIALKPG 194
Cdd:pfam03853 162 FGAPKPG 168
|
|
| PLN03050 |
PLN03050 |
pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional |
11-205 |
9.43e-16 |
|
pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Pssm-ID: 215551 [Multi-domain] Cd Length: 246 Bit Score: 76.84 E-value: 9.43e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 11 SIWHADDLRRAEKEAADSLGITLYELMLRAG----EAAFNVARSAYPQA-----AHWMILCGHGNNGGDGYVVARLAVAA 81
Cdd:PLN03050 7 GYLNAQDAAALDEELMSTPGFSLEQLMELAGlsvaEAVYEVADGEKASNppgrhPRVLLVCGPGNNGGDGLVAARHLAHF 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 82 GIRVTLL-ALESDKPLPE------EASGAREAWLNAGGVihAPDIVWPEEVDLIVDGLLGTGLRSAPRENIAALIEHANR 154
Cdd:PLN03050 87 GYEVTVCyPKQSSKPHYEnlvtqcEDLGIPFVQAIGGTN--DSSKPLETTYDVIVDAIFGFSFHGAPRAPFDTLLAQMVQ 164
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 578181816 155 HSA---PVVALDIPSGLIAQTGATPGAVIQAAHTVTFIALKPGLLTGKARDVVG 205
Cdd:PLN03050 165 QQKsppPIVSVDVPSGWDVDEGDVSGTGMRPDVLVSLTAPKLSAKKFEGRHFVG 218
|
|
| PLN03049 |
PLN03049 |
pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional |
4-192 |
3.87e-12 |
|
pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Pssm-ID: 215550 [Multi-domain] Cd Length: 462 Bit Score: 68.34 E-value: 3.87e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 4 NPASIPHsiwhaddLRRAEKEAADS-----LGITLYELMLRAGEAAFNVARSAYPqAAHW---MILCGHGNNGGDGYVVA 75
Cdd:PLN03049 8 NPDSISY-------LSQREAIAIDEhlmgpLGFSVDQLMELAGLSVASAIAEVYS-PSEYrrvLALCGPGNNGGDGLVAA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 76 RLAVAAGIRVTLL-ALESDKPLPEEASGAREAwlnaggvIHAPDIVW-------PEEVDLIVDGLLGTGLRSAPRENIAA 147
Cdd:PLN03049 80 RHLHHFGYKPSICyPKRTDKPLYNGLVTQLES-------LSVPFLSVedlpsdlSSQFDIVVDAMFGFSFHGAPRPPFDD 152
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 578181816 148 LIEH--ANRHSAPVVALDIPSGLIAQTGATPGAVIQAAHTVTFIALK 192
Cdd:PLN03049 153 LIQKlvRAAGPPPIVSVDIPSGWHVEEGDVNGEGLKPDMLVSLTAPK 199
|
|
| THZ_kinase |
cd01170 |
4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the ... |
381-473 |
1.63e-09 |
|
4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz. A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate.
Pssm-ID: 238575 [Multi-domain] Cd Length: 242 Bit Score: 58.32 E-value: 1.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 381 SVAEIESDRLLSAQRLVKRYGGVAVLKGAGTVVASDETQGIIDAGNAGMAS-GGMGDVLSGIIGALLGQKLPLYDAACAG 459
Cdd:cd01170 133 SSSSDEEDALELAKALARKYGAVVVVTGEVDYITDGERVVVVKNGHPLLTKiTGTGCLLGAVIAAFLAVGDDPLEAAVSA 212
|
90
....*....|....
gi 578181816 460 CVAHGVAADKLAAR 473
Cdd:cd01170 213 VLVYGIAGELAAER 226
|
|
| PRK09355 |
PRK09355 |
hydroxyethylthiazole kinase; Validated |
383-473 |
8.96e-06 |
|
hydroxyethylthiazole kinase; Validated
Pssm-ID: 236477 [Multi-domain] Cd Length: 263 Bit Score: 47.10 E-value: 8.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578181816 383 AEIESDRLLSAQRLVKRYGGVAVLKGAGTVVASDETQGIIDAGNAGMAS-GGMGDVLSGIIGALLGQKLPLYDAACAGCV 461
Cdd:PRK09355 139 TDGSADAVEIAKAAAKKYGTVVVVTGEVDYITDGERVVSVHNGHPLMTKvTGTGCLLSAVVAAFAAVEKDYLEAAAAACA 218
|
90
....*....|..
gi 578181816 462 AHGVAADKLAAR 473
Cdd:PRK09355 219 VYGIAGELAAER 230
|
|
| |
