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Conserved domains on  [gi|577502705|gb|EUH15720|]
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phage protein [Staphylococcus aureus M0088]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2482 pfam10655
Hypothetical protein of unknown function (DUF2482); All the members of this very small, very ...
 3-99 1.76e-44

Hypothetical protein of unknown function (DUF2482); All the members of this very small, very short family are derived from bacteriophages, of the SA bacteriophages 11, Mu50B, system, and from the Staphylococcal_phi-Mu50B-like_prophages subsystem. All members are hypothetical proteins.


:

Pssm-ID: 463173  Cd Length: 97  Bit Score: 139.55  E-value: 1.76e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 577502705    3 KNYKDMMQEELRDLLAEKNGELFEVVNEINKETEFAVLLFSTVGVSNGDTTSSSHCALGDIVGLANLLNNENDYHDIANV 82
Cdd:pfam10655   1 KNYKDMTQEEIRDLLAEKNGELRELIEEIKEETEFDILLFSTIGVIDGDFVASSHCALGHIVGLANLLANEKSFSDISNV 80

                          90
                  ....*....|....*..
gi 577502705   83 IEMYKLKKLLGLADNKE 99
Cdd:pfam10655  81 IAMYKLKKLLGNDDNKE 97
 
Name Accession Description Interval E-value
DUF2482 pfam10655
Hypothetical protein of unknown function (DUF2482); All the members of this very small, very ...
 3-99 1.76e-44

Hypothetical protein of unknown function (DUF2482); All the members of this very small, very short family are derived from bacteriophages, of the SA bacteriophages 11, Mu50B, system, and from the Staphylococcal_phi-Mu50B-like_prophages subsystem. All members are hypothetical proteins.


Pssm-ID: 463173  Cd Length: 97  Bit Score: 139.55  E-value: 1.76e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 577502705    3 KNYKDMMQEELRDLLAEKNGELFEVVNEINKETEFAVLLFSTVGVSNGDTTSSSHCALGDIVGLANLLNNENDYHDIANV 82
Cdd:pfam10655   1 KNYKDMTQEEIRDLLAEKNGELRELIEEIKEETEFDILLFSTIGVIDGDFVASSHCALGHIVGLANLLANEKSFSDISNV 80

                          90
                  ....*....|....*..
gi 577502705   83 IEMYKLKKLLGLADNKE 99
Cdd:pfam10655  81 IAMYKLKKLLGNDDNKE 97
 
Name Accession Description Interval E-value
DUF2482 pfam10655
Hypothetical protein of unknown function (DUF2482); All the members of this very small, very ...
 3-99 1.76e-44

Hypothetical protein of unknown function (DUF2482); All the members of this very small, very short family are derived from bacteriophages, of the SA bacteriophages 11, Mu50B, system, and from the Staphylococcal_phi-Mu50B-like_prophages subsystem. All members are hypothetical proteins.


Pssm-ID: 463173  Cd Length: 97  Bit Score: 139.55  E-value: 1.76e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 577502705    3 KNYKDMMQEELRDLLAEKNGELFEVVNEINKETEFAVLLFSTVGVSNGDTTSSSHCALGDIVGLANLLNNENDYHDIANV 82
Cdd:pfam10655   1 KNYKDMTQEEIRDLLAEKNGELRELIEEIKEETEFDILLFSTIGVIDGDFVASSHCALGHIVGLANLLANEKSFSDISNV 80

                          90
                  ....*....|....*..
gi 577502705   83 IEMYKLKKLLGLADNKE 99
Cdd:pfam10655  81 IAMYKLKKLLGNDDNKE 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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