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Conserved domains on  [gi|573032213|gb|ETS65429|]
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hypothetical protein PaG_00163 [Moesziomyces aphidis]

Protein Classification

DNA replication factor Cdt1 C-terminal domain-containing protein( domain architecture ID 11245005)

DNA replication factor Cdt1 C-terminal domain-containing protein may directly interact with the MCM2-7 helicase

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CDT1_C pfam16679
DNA replication factor Cdt1 C-terminal domain; This is the C-terminal domain of DNA ...
868-975 1.19e-14

DNA replication factor Cdt1 C-terminal domain; This is the C-terminal domain of DNA replication factor Cdt1. This domain binds the MCM complex.


:

Pssm-ID: 465230  Cd Length: 96  Bit Score: 70.30  E-value: 1.19e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573032213   868 SLRERIQAKEQLRRTASLPalasgsmTPMQALSQRALVSRLPELCSILFMLFsngttlswtGITRSPTIPMQDLLAKLSK 947
Cdd:pfam16679    1 SLLERIRAKEAAKALAAMP-------RKPELERRAALLSRLPEVARVLRLLF---------VSEKRSSFTMEELVQKLKD 64
                           90       100
                   ....*....|....*....|....*...
gi 573032213   948 STKITLSPRECRAAIDLLASIAPGFLVV 975
Cdd:pfam16679   65 SLRTPISKEEIEEHLRLLAELAPDWISI 92
 
Name Accession Description Interval E-value
CDT1_C pfam16679
DNA replication factor Cdt1 C-terminal domain; This is the C-terminal domain of DNA ...
868-975 1.19e-14

DNA replication factor Cdt1 C-terminal domain; This is the C-terminal domain of DNA replication factor Cdt1. This domain binds the MCM complex.


Pssm-ID: 465230  Cd Length: 96  Bit Score: 70.30  E-value: 1.19e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573032213   868 SLRERIQAKEQLRRTASLPalasgsmTPMQALSQRALVSRLPELCSILFMLFsngttlswtGITRSPTIPMQDLLAKLSK 947
Cdd:pfam16679    1 SLLERIRAKEAAKALAAMP-------RKPELERRAALLSRLPEVARVLRLLF---------VSEKRSSFTMEELVQKLKD 64
                           90       100
                   ....*....|....*....|....*...
gi 573032213   948 STKITLSPRECRAAIDLLASIAPGFLVV 975
Cdd:pfam16679   65 SLRTPISKEEIEEHLRLLAELAPDWISI 92
Cdt1_c cd08767
The C-terminal fold of replication licensing factor Cdt1 is essential for Cdt1 activity and ...
867-992 2.64e-11

The C-terminal fold of replication licensing factor Cdt1 is essential for Cdt1 activity and directly interacts with MCM2-7 helicase; Cdt1 is a replication licensing factor in eukaryotes that recruits the Minichromosome Maintenance Complex (MCM2-7) to the Origin Recognition Complex (ORC). The Cdt1 protein is divided into three regions based on sequence comparison and biochemical analyses: the N-terminal region (Cdt1_n) binds DNA in a sequence-, strand-, and conformation-independent manner; the middle winged helix fold (Cdt1_m) binds geminin to inhibit both binding of the MCM complex to origins of replication and DNA; and the C-terminal region (Cdt1_c) is essential for Cdt1 activity and directly interacts with the MCM2-7 helicase. Precise duplication of chromosomal DNA is required for genomic stability during replication. Assembly of replication factors to start DNA replication in eukaryotes must occur only once per cell cycle. To form a pre-replicative complex on replication origins in the G phase, ORC first binds origin DNA and triggers the binding of Cdc6 and Cdt1. These two factors recruit a putative replicative helicase and the MCM2-7. The MCM2-7 complex promotes the unwinding of DNA origins, and the binding of additional factors to initiate the DNA replication in S-phase. Cdt1 is present during G1 and early S phase of the cell cycle and is degraded during the late S, G2, and M phases. The winged helix fold structure of Cdt1_m is similar to the structures of Cdt1_c and archaeal homologues of the eukaryotic replication initiator, without apparent sequence similarity.


Pssm-ID: 176572  Cd Length: 126  Bit Score: 61.91  E-value: 2.64e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573032213  867 MSLRERIQAKEQLRRTASlpalasgsMTPMQALSQR-ALVSRLPELCSILFMLFSNgttlswtgiTRSPTIPMQDLLAKL 945
Cdd:cd08767     9 KSLLERIRAKEAAKALEK--------MTRRPEQEKRrRMYARLPELARILRNIFVS---------EKKTVLPLEELVYKL 71
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 573032213  946 SKSTKITLSPRECRAAIDLLASIAPGFLVVLNpsdtaaAGTKEYVRL 992
Cdd:cd08767    72 QASYPSILSRGEVEEHLRLLAELAPDWISEKS------LRKGDYLKI 112
 
Name Accession Description Interval E-value
CDT1_C pfam16679
DNA replication factor Cdt1 C-terminal domain; This is the C-terminal domain of DNA ...
868-975 1.19e-14

DNA replication factor Cdt1 C-terminal domain; This is the C-terminal domain of DNA replication factor Cdt1. This domain binds the MCM complex.


Pssm-ID: 465230  Cd Length: 96  Bit Score: 70.30  E-value: 1.19e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573032213   868 SLRERIQAKEQLRRTASLPalasgsmTPMQALSQRALVSRLPELCSILFMLFsngttlswtGITRSPTIPMQDLLAKLSK 947
Cdd:pfam16679    1 SLLERIRAKEAAKALAAMP-------RKPELERRAALLSRLPEVARVLRLLF---------VSEKRSSFTMEELVQKLKD 64
                           90       100
                   ....*....|....*....|....*...
gi 573032213   948 STKITLSPRECRAAIDLLASIAPGFLVV 975
Cdd:pfam16679   65 SLRTPISKEEIEEHLRLLAELAPDWISI 92
Cdt1_c cd08767
The C-terminal fold of replication licensing factor Cdt1 is essential for Cdt1 activity and ...
867-992 2.64e-11

The C-terminal fold of replication licensing factor Cdt1 is essential for Cdt1 activity and directly interacts with MCM2-7 helicase; Cdt1 is a replication licensing factor in eukaryotes that recruits the Minichromosome Maintenance Complex (MCM2-7) to the Origin Recognition Complex (ORC). The Cdt1 protein is divided into three regions based on sequence comparison and biochemical analyses: the N-terminal region (Cdt1_n) binds DNA in a sequence-, strand-, and conformation-independent manner; the middle winged helix fold (Cdt1_m) binds geminin to inhibit both binding of the MCM complex to origins of replication and DNA; and the C-terminal region (Cdt1_c) is essential for Cdt1 activity and directly interacts with the MCM2-7 helicase. Precise duplication of chromosomal DNA is required for genomic stability during replication. Assembly of replication factors to start DNA replication in eukaryotes must occur only once per cell cycle. To form a pre-replicative complex on replication origins in the G phase, ORC first binds origin DNA and triggers the binding of Cdc6 and Cdt1. These two factors recruit a putative replicative helicase and the MCM2-7. The MCM2-7 complex promotes the unwinding of DNA origins, and the binding of additional factors to initiate the DNA replication in S-phase. Cdt1 is present during G1 and early S phase of the cell cycle and is degraded during the late S, G2, and M phases. The winged helix fold structure of Cdt1_m is similar to the structures of Cdt1_c and archaeal homologues of the eukaryotic replication initiator, without apparent sequence similarity.


Pssm-ID: 176572  Cd Length: 126  Bit Score: 61.91  E-value: 2.64e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 573032213  867 MSLRERIQAKEQLRRTASlpalasgsMTPMQALSQR-ALVSRLPELCSILFMLFSNgttlswtgiTRSPTIPMQDLLAKL 945
Cdd:cd08767     9 KSLLERIRAKEAAKALEK--------MTRRPEQEKRrRMYARLPELARILRNIFVS---------EKKTVLPLEELVYKL 71
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 573032213  946 SKSTKITLSPRECRAAIDLLASIAPGFLVVLNpsdtaaAGTKEYVRL 992
Cdd:cd08767    72 QASYPSILSRGEVEEHLRLLAELAPDWISEKS------LRKGDYLKI 112
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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