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Conserved domains on  [gi|435304079|gb|ELO79887|]
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aconitate hydratase, partial [Salmonella enterica subsp. enterica serovar Enteritidis str. 33944]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK09277 super family cl35800
aconitate hydratase AcnA;
2-277 0e+00

aconitate hydratase AcnA;


The actual alignment was detected with superfamily member PRK09277:

Pssm-ID: 236445 [Multi-domain]  Cd Length: 888  Bit Score: 588.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   2 SMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAI 81
Cdd:PRK09277 243 SMLIPEVVGVKLTGKLPEGVTATDLVLTVTEMLRKKGVVGKFVEFFGEGLASLSLADRATIANMAPEYGATCGFFPIDEE 322
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  82 TLEYMRLSGRSDDLVELVEAYAKAQGMWRNPGDEPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVPKAFAASAELELN 161
Cdd:PRK09277 323 TLDYLRLTGRDEEQVALVEAYAKAQGLWRDPLEEPVYTDVLELDLSTVEPSLAGPKRPQDRIPLSDVKEAFAKSAELGVQ 402
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 162 TAQRDRQPVdytmnGQPYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYLAQ 241
Cdd:PRK09277 403 GFGLDEAEE-----GEDYELPDGAVVIAAITSCTNTSNPSVMIAAGLLAKKAVEKGLKVKPWVKTSLAPGSKVVTDYLEK 477
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 435304079 242 AKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETA 277
Cdd:PRK09277 478 AGLLPYLEALGFNLVGYGCTTCIGNSGPLPPEIEKA 513
 
Name Accession Description Interval E-value
PRK09277 PRK09277
aconitate hydratase AcnA;
2-277 0e+00

aconitate hydratase AcnA;


Pssm-ID: 236445 [Multi-domain]  Cd Length: 888  Bit Score: 588.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   2 SMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAI 81
Cdd:PRK09277 243 SMLIPEVVGVKLTGKLPEGVTATDLVLTVTEMLRKKGVVGKFVEFFGEGLASLSLADRATIANMAPEYGATCGFFPIDEE 322
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  82 TLEYMRLSGRSDDLVELVEAYAKAQGMWRNPGDEPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVPKAFAASAELELN 161
Cdd:PRK09277 323 TLDYLRLTGRDEEQVALVEAYAKAQGLWRDPLEEPVYTDVLELDLSTVEPSLAGPKRPQDRIPLSDVKEAFAKSAELGVQ 402
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 162 TAQRDRQPVdytmnGQPYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYLAQ 241
Cdd:PRK09277 403 GFGLDEAEE-----GEDYELPDGAVVIAAITSCTNTSNPSVMIAAGLLAKKAVEKGLKVKPWVKTSLAPGSKVVTDYLEK 477
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 435304079 242 AKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETA 277
Cdd:PRK09277 478 AGLLPYLEALGFNLVGYGCTTCIGNSGPLPPEIEKA 513
AcnA COG1048
Aconitase A [Energy production and conversion]; Aconitase A is part of the Pathway/BioSystem: ...
2-277 0e+00

Aconitase A [Energy production and conversion]; Aconitase A is part of the Pathway/BioSystem: Lysine biosynthesisTCA cycle


Pssm-ID: 440669 [Multi-domain]  Cd Length: 891  Bit Score: 564.34  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   2 SMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAI 81
Cdd:COG1048  241 SMLIPEVVGVKLTGKLPEGVTATDLVLTVTEMLRKKGVVGKFVEFFGPGLASLSLADRATIANMAPEYGATCGFFPVDEE 320
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  82 TLEYMRLSGRSDDLVELVEAYAKAQGMWRNPGD-EPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVPKAFAASaeLEL 160
Cdd:COG1048  321 TLDYLRLTGRSEEQIELVEAYAKAQGLWRDPDApEPYYSDVLELDLSTVEPSLAGPKRPQDRIPLSDLKEAFRAA--LAA 398
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 161 NTAQRDRQPVDYTMNGQPYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYLA 240
Cdd:COG1048  399 PVGEELDKPVRVEVDGEEFELGHGAVVIAAITSCTNTSNPSVMIAAGLLAKKAVEKGLKVKPWVKTSLAPGSKVVTDYLE 478
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 435304079 241 QAKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETA 277
Cdd:COG1048  479 RAGLLPYLEALGFNVVGYGCTTCIGNSGPLPPEISEA 515
aconitase_1 TIGR01341
aconitate hydratase 1; This model represents one form of the TCA cycle enzyme aconitate ...
1-277 1.39e-174

aconitate hydratase 1; This model represents one form of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydro-lyase. It is found in bacteria, archaea, and eukaryotic cytosol. It has been shown to act also as an iron-responsive element binding protein in animals and may have the same role in other eukaryotes. [Energy metabolism, TCA cycle]


Pssm-ID: 273562 [Multi-domain]  Cd Length: 876  Bit Score: 504.34  E-value: 1.39e-174
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079    1 MSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDA 80
Cdd:TIGR01341 225 YYMNVPEVIGVKLTGKLQEGVTATDLVLTVTQMLRKKGVVGKFVEFFGPGLSELSLADRATIANMAPEYGATCGFFPIDD 304
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   81 ITLEYMRLSGRSDDLVELVEAYAKAQGMWRNPGDEPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVPKAFaaSAELEL 160
Cdd:TIGR01341 305 VTLQYLRLTGRDGDHVELVEKYARAQGLFYDDSEEPRYTDVVELDLSDVEPSVAGPKRPQDRIPLREVKAKF--SKELEK 382
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  161 NTAQRD----RQPVDYTMNGQPYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVS 236
Cdd:TIGR01341 383 NGGDKGftlrKEPLKKKVNGQNKQLEDGAVVIAAITSCTNTSNPSVMLGAGLLAKKAVELGLKVPPYVKTSLAPGSKVVT 462
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 435304079  237 DYLAQAKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETA 277
Cdd:TIGR01341 463 DYLAESGLLPYLEELGFNLVGYGCTTCIGNSGPLPKYVEEA 503
Aconitase pfam00330
Aconitase family (aconitate hydratase);
2-272 2.85e-133

Aconitase family (aconitate hydratase);


Pssm-ID: 459764  Cd Length: 460  Bit Score: 384.85  E-value: 2.85e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079    2 SMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAI 81
Cdd:pfam00330 159 EMKKPKVVGVKLTGKLPPGVTAKDVILAIIGKLGVKGGTGKVVEFFGPGVRSLSMEGRATICNMAIEYGATAGLFPPDET 238
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   82 TLEYMRLSGRSDDLVelVEAYAKAQGMWRNPGDE-PVFTSTLELDMGDVEASLAGPKRPQDRVAL-GDVPKAFAASAEle 159
Cdd:pfam00330 239 TFEYLRATGRPEAPK--GEAYDKAVAWKTLASDPgAEYDKVVEIDLSTIEPMVTGPTRPQDAVPLsELVPDPFADAVK-- 314
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  160 lntAQRDRQPVDYTMNGQPYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLaKKAVTLGLKRQPWVKASLAPGSKVVSDYL 239
Cdd:pfam00330 315 ---RKAAERALEYMGLGPGTPLSDGKVDIAFIGSCTNSSIEDLRAAAGLL-KKAVEKGLKVAPGVKASVVPGSEVVRAYA 390
                         250       260       270
                  ....*....|....*....|....*....|...
gi 435304079  240 AQAKLTPYLDELGFNLVGYGCTTCIGNSGPLPE 272
Cdd:pfam00330 391 EAEGLDKILEEAGFEWRGPGCSMCIGNSDRLPP 423
AcnA_IRP cd01586
Aconitase A catalytic domain; Aconitase A catalytic domain. This is the major form of the TCA ...
1-277 2.49e-128

Aconitase A catalytic domain; Aconitase A catalytic domain. This is the major form of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydrolyase. It includes bacterial and archaeal aconitase A, and the eukaryotic cytosolic form of aconitase. This group also includes sequences that have been shown to act as an iron-responsive element (IRE) binding protein in animals and may have the same role in other eukaryotes.


Pssm-ID: 153136  Cd Length: 404  Bit Score: 370.10  E-value: 2.49e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   1 MSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDa 80
Cdd:cd01586  158 ISMLLPEVVGVKLTGKLRPGVTATDLVLTVTQMLRKVGVVGKFVEFFGPGVAKLSVADRATIANMAPEYGATCGFFPVD- 236
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  81 itleymrlsgrsddlvelveayakaqgmwrnpgdepvfTSTLELDMGDVEASLAGPKRPQDRVALgdvpkafaasaelel 160
Cdd:cd01586  237 --------------------------------------TQVVELDLSTVEPSVSGPKRPQDRVPL--------------- 263
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 161 ntaqrdrqpvdytmngqpyqlpDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYLA 240
Cdd:cd01586  264 ----------------------HGSVVIAAITSCTNTSNPSVMLAAGLLAKKAVELGLKVKPYVKTSLAPGSRVVTKYLE 321
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 435304079 241 QAKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETA 277
Cdd:cd01586  322 ASGLLPYLEKLGFHVVGYGCTTCIGNSGPLPEEVEEA 358
 
Name Accession Description Interval E-value
PRK09277 PRK09277
aconitate hydratase AcnA;
2-277 0e+00

aconitate hydratase AcnA;


Pssm-ID: 236445 [Multi-domain]  Cd Length: 888  Bit Score: 588.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   2 SMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAI 81
Cdd:PRK09277 243 SMLIPEVVGVKLTGKLPEGVTATDLVLTVTEMLRKKGVVGKFVEFFGEGLASLSLADRATIANMAPEYGATCGFFPIDEE 322
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  82 TLEYMRLSGRSDDLVELVEAYAKAQGMWRNPGDEPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVPKAFAASAELELN 161
Cdd:PRK09277 323 TLDYLRLTGRDEEQVALVEAYAKAQGLWRDPLEEPVYTDVLELDLSTVEPSLAGPKRPQDRIPLSDVKEAFAKSAELGVQ 402
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 162 TAQRDRQPVdytmnGQPYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYLAQ 241
Cdd:PRK09277 403 GFGLDEAEE-----GEDYELPDGAVVIAAITSCTNTSNPSVMIAAGLLAKKAVEKGLKVKPWVKTSLAPGSKVVTDYLEK 477
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 435304079 242 AKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETA 277
Cdd:PRK09277 478 AGLLPYLEALGFNLVGYGCTTCIGNSGPLPPEIEKA 513
AcnA COG1048
Aconitase A [Energy production and conversion]; Aconitase A is part of the Pathway/BioSystem: ...
2-277 0e+00

Aconitase A [Energy production and conversion]; Aconitase A is part of the Pathway/BioSystem: Lysine biosynthesisTCA cycle


Pssm-ID: 440669 [Multi-domain]  Cd Length: 891  Bit Score: 564.34  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   2 SMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAI 81
Cdd:COG1048  241 SMLIPEVVGVKLTGKLPEGVTATDLVLTVTEMLRKKGVVGKFVEFFGPGLASLSLADRATIANMAPEYGATCGFFPVDEE 320
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  82 TLEYMRLSGRSDDLVELVEAYAKAQGMWRNPGD-EPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVPKAFAASaeLEL 160
Cdd:COG1048  321 TLDYLRLTGRSEEQIELVEAYAKAQGLWRDPDApEPYYSDVLELDLSTVEPSLAGPKRPQDRIPLSDLKEAFRAA--LAA 398
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 161 NTAQRDRQPVDYTMNGQPYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYLA 240
Cdd:COG1048  399 PVGEELDKPVRVEVDGEEFELGHGAVVIAAITSCTNTSNPSVMIAAGLLAKKAVEKGLKVKPWVKTSLAPGSKVVTDYLE 478
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 435304079 241 QAKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETA 277
Cdd:COG1048  479 RAGLLPYLEALGFNVVGYGCTTCIGNSGPLPPEISEA 515
aconitase_1 TIGR01341
aconitate hydratase 1; This model represents one form of the TCA cycle enzyme aconitate ...
1-277 1.39e-174

aconitate hydratase 1; This model represents one form of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydro-lyase. It is found in bacteria, archaea, and eukaryotic cytosol. It has been shown to act also as an iron-responsive element binding protein in animals and may have the same role in other eukaryotes. [Energy metabolism, TCA cycle]


Pssm-ID: 273562 [Multi-domain]  Cd Length: 876  Bit Score: 504.34  E-value: 1.39e-174
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079    1 MSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDA 80
Cdd:TIGR01341 225 YYMNVPEVIGVKLTGKLQEGVTATDLVLTVTQMLRKKGVVGKFVEFFGPGLSELSLADRATIANMAPEYGATCGFFPIDD 304
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   81 ITLEYMRLSGRSDDLVELVEAYAKAQGMWRNPGDEPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVPKAFaaSAELEL 160
Cdd:TIGR01341 305 VTLQYLRLTGRDGDHVELVEKYARAQGLFYDDSEEPRYTDVVELDLSDVEPSVAGPKRPQDRIPLREVKAKF--SKELEK 382
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  161 NTAQRD----RQPVDYTMNGQPYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVS 236
Cdd:TIGR01341 383 NGGDKGftlrKEPLKKKVNGQNKQLEDGAVVIAAITSCTNTSNPSVMLGAGLLAKKAVELGLKVPPYVKTSLAPGSKVVT 462
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 435304079  237 DYLAQAKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETA 277
Cdd:TIGR01341 463 DYLAESGLLPYLEELGFNLVGYGCTTCIGNSGPLPKYVEEA 503
acnA PRK12881
aconitate hydratase AcnA;
2-277 5.23e-173

aconitate hydratase AcnA;


Pssm-ID: 237246 [Multi-domain]  Cd Length: 889  Bit Score: 500.61  E-value: 5.23e-173
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   2 SMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAI 81
Cdd:PRK12881 243 YMLIPDVVGVELTGKLREGVTATDLVLTVTEMLRKEGVVGKFVEFFGEGVASLTLGDRATIANMAPEYGATMGFFPVDEQ 322
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  82 TLEYMRLSGRSDDLVELVEAYAKAQGMWRNPGDEPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVPKAFAAsaeleln 161
Cdd:PRK12881 323 TLDYLRLTGRTEAQIALVEAYAKAQGLWGDPKAEPRYTRTLELDLSTVAPSLAGPKRPQDRIALGNVKSAFSD------- 395
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 162 TAQRDRQPVDYTMNGQP---YQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDY 238
Cdd:PRK12881 396 LFSKPVAENGFAKKAQTsngVDLPDGAVAIAAITSCTNTSNPSVLIAAGLLAKKAVERGLTVKPWVKTSLAPGSKVVTEY 475
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 435304079 239 LAQAKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETA 277
Cdd:PRK12881 476 LERAGLLPYLEKLGFGIVGYGCTTCIGNSGPLTPEIEQA 514
PTZ00092 PTZ00092
aconitate hydratase-like protein; Provisional
1-277 7.26e-144

aconitate hydratase-like protein; Provisional


Pssm-ID: 240263 [Multi-domain]  Cd Length: 898  Bit Score: 425.97  E-value: 7.26e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   1 MSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDA 80
Cdd:PTZ00092 245 ISMVLPEVVGFKLTGKLSEHVTATDLVLTVTSMLRKRGVVGKFVEFYGPGVKTLSLADRATIANMAPEYGATMGFFPIDE 324
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  81 ITLEYMRLSGRSDDLVELVEAYAKAQGMWRNPGDEPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVPKAFAASAELEL 160
Cdd:PTZ00092 325 KTLDYLKQTGRSEEKVELIEKYLKANGLFRTYAEQIEYSDVLELDLSTVVPSVAGPKRPHDRVPLSDLKKDFTACLSAPV 404
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 161 N------TAQRDRQPVDYTMNGQPYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKV 234
Cdd:PTZ00092 405 GfkgfgiPEEKHEKKVKFTYKGKEYTLTHGSVVIAAITSCTNTSNPSVMLAAGLLAKKAVEKGLKVPPYIKTSLSPGSKV 484
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 435304079 235 VSDYLAQAKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETA 277
Cdd:PTZ00092 485 VTKYLEASGLLKYLEKLGFYTAGYGCMTCIGNSGDLDPEVSEA 527
PLN00070 PLN00070
aconitate hydratase
1-277 1.52e-135

aconitate hydratase


Pssm-ID: 215047 [Multi-domain]  Cd Length: 936  Bit Score: 405.34  E-value: 1.52e-135
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   1 MSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDA 80
Cdd:PLN00070 277 MSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDH 356
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  81 ITLEYMRLSGRSDDLVELVEAYAKAQGM---WRNPGDEPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVP-------- 149
Cdd:PLN00070 357 VTLQYLKLTGRSDETVAMIEAYLRANKMfvdYNEPQQERVYSSYLELDLEDVEPCISGPKRPHDRVPLKEMKadwhscld 436
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 150 -----KAFAASAELELNTAQrdrqpvdYTMNGQPYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWV 224
Cdd:PLN00070 437 nkvgfKGFAVPKEAQSKVAK-------FSFHGQPAELRHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLEVKPWI 509
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 435304079 225 KASLAPGSKVVSDYLAQAKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETA 277
Cdd:PLN00070 510 KTSLAPGSGVVTKYLLKSGLQKYLNQQGFHIVGYGCTTCIGNSGELDESVASA 562
Aconitase pfam00330
Aconitase family (aconitate hydratase);
2-272 2.85e-133

Aconitase family (aconitate hydratase);


Pssm-ID: 459764  Cd Length: 460  Bit Score: 384.85  E-value: 2.85e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079    2 SMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAI 81
Cdd:pfam00330 159 EMKKPKVVGVKLTGKLPPGVTAKDVILAIIGKLGVKGGTGKVVEFFGPGVRSLSMEGRATICNMAIEYGATAGLFPPDET 238
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   82 TLEYMRLSGRSDDLVelVEAYAKAQGMWRNPGDE-PVFTSTLELDMGDVEASLAGPKRPQDRVAL-GDVPKAFAASAEle 159
Cdd:pfam00330 239 TFEYLRATGRPEAPK--GEAYDKAVAWKTLASDPgAEYDKVVEIDLSTIEPMVTGPTRPQDAVPLsELVPDPFADAVK-- 314
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  160 lntAQRDRQPVDYTMNGQPYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLaKKAVTLGLKRQPWVKASLAPGSKVVSDYL 239
Cdd:pfam00330 315 ---RKAAERALEYMGLGPGTPLSDGKVDIAFIGSCTNSSIEDLRAAAGLL-KKAVEKGLKVAPGVKASVVPGSEVVRAYA 390
                         250       260       270
                  ....*....|....*....|....*....|...
gi 435304079  240 AQAKLTPYLDELGFNLVGYGCTTCIGNSGPLPE 272
Cdd:pfam00330 391 EAEGLDKILEEAGFEWRGPGCSMCIGNSDRLPP 423
AcnA_IRP cd01586
Aconitase A catalytic domain; Aconitase A catalytic domain. This is the major form of the TCA ...
1-277 2.49e-128

Aconitase A catalytic domain; Aconitase A catalytic domain. This is the major form of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydrolyase. It includes bacterial and archaeal aconitase A, and the eukaryotic cytosolic form of aconitase. This group also includes sequences that have been shown to act as an iron-responsive element (IRE) binding protein in animals and may have the same role in other eukaryotes.


Pssm-ID: 153136  Cd Length: 404  Bit Score: 370.10  E-value: 2.49e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   1 MSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDa 80
Cdd:cd01586  158 ISMLLPEVVGVKLTGKLRPGVTATDLVLTVTQMLRKVGVVGKFVEFFGPGVAKLSVADRATIANMAPEYGATCGFFPVD- 236
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  81 itleymrlsgrsddlvelveayakaqgmwrnpgdepvfTSTLELDMGDVEASLAGPKRPQDRVALgdvpkafaasaelel 160
Cdd:cd01586  237 --------------------------------------TQVVELDLSTVEPSVSGPKRPQDRVPL--------------- 263
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 161 ntaqrdrqpvdytmngqpyqlpDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYLA 240
Cdd:cd01586  264 ----------------------HGSVVIAAITSCTNTSNPSVMLAAGLLAKKAVELGLKVKPYVKTSLAPGSRVVTKYLE 321
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 435304079 241 QAKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETA 277
Cdd:cd01586  322 ASGLLPYLEKLGFHVVGYGCTTCIGNSGPLPEEVEEA 358
Aconitase cd01351
Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and ...
1-276 7.56e-47

Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle; Aconitase catalytic domain. Aconitase (aconitate hydratase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Cis-aconitate is formed as an intermediate product during the course of the reaction. In eukaryotes two isozymes of aconitase are known to exist: one found in the mitochondrial matrix and the other found in the cytoplasm. Aconitase, in its active form, contains a 4Fe-4S iron-sulfur cluster; three cysteine residues have been shown to be ligands of the 4Fe-4S cluster. This is the Aconitase core domain, including structural domains 1, 2 and 3, which binds the Fe-S cluster. The aconitase family also contains the following proteins: - Iron-responsive element binding protein (IRE-BP), a cytosolic protein that binds to iron-responsive elements (IREs). IREs are stem-loop structures found in the 5'UTR of ferritin, and delta aminolevulinic acid synthase mRNAs, and in the 3'UTR of transferrin receptor mRNA. IRE-BP also express aconitase activity. - 3-isopropylmalate dehydratase (isopropylmalate isomerase), the enzyme that catalyzes the second step in the biosynthesis of leucine. - Homoaconitase (homoaconitate hydratase), an enzyme that participates in the alpha-aminoadipate pathway of lysine biosynthesis and that converts cis-homoaconitate into homoisocitric acid.


Pssm-ID: 153129 [Multi-domain]  Cd Length: 389  Bit Score: 160.74  E-value: 7.56e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   1 MSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDA 80
Cdd:cd01351  121 AWLKKPEVVGVNLTGKLSPGVTGKDVVLKLGGIVGVDGVLNRIVEFYGEGVSSLSIEDRLTICNMMAELGATTGIFPEDK 200
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  81 ITLEYMRLSGRSDdLVELVEAYAKAQgmwrNPGDEPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVPKafaasaelel 160
Cdd:cd01351  201 TTLKWLEATGRPL-LKNLWLAFPEEL----LADEGAEYDQVIEIDLSELEPDISGPNRPDDAVSVSEVEG---------- 265
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 161 ntaqrdrqpvdytmngqpyqlpdGAVVIAAITSCTNtSNPSVLMAAGLLAKKAvtlglKRQPWVKASLAPGSKVVSDYLA 240
Cdd:cd01351  266 -----------------------TKIDQVLIGSCTN-NRYSDMLAAAKLLKGA-----KVAPGVRLIVTPGSRMVYATLS 316
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 435304079 241 QAKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIET 276
Cdd:cd01351  317 REGYYEILVDSGARILPPGCGPCMGNGARLVADGEV 352
PRK07229 PRK07229
aconitate hydratase; Validated
6-265 7.58e-33

aconitate hydratase; Validated


Pssm-ID: 235974 [Multi-domain]  Cd Length: 646  Bit Score: 126.41  E-value: 7.58e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   6 PDVVGFKLTGKLREGITATDLVLTvtqMLRKHGV---VGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAIT 82
Cdd:PRK07229 154 PKVVGVKLTGKLPPWVSAKDVILE---LLRRLTVkggVGKIIEYFGPGVATLSVPERATITNMGAELGATTSIFPSDERT 230
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  83 LEYMRLSGRSDDLVELVeayakaqgmwrnPGDEPVFTSTLELDMGDVEASLAGPKRPqDRValgdVPkafaaSAELElnt 162
Cdd:PRK07229 231 REFLKAQGREDDWVELL------------ADPDAEYDEVIEIDLSELEPLIAGPHSP-DNV----VP-----VSEVA--- 285
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 163 aqrdRQPVDYtmngqpyqlpdgavviAAITSCTNTSNPSVLMAAGLLAKKAVTlglkrqpwVKASL--APGSKVVSDYLA 240
Cdd:PRK07229 286 ----GIKVDQ----------------VLIGSCTNSSYEDLMRAASILKGKKVH--------PKVSLviNPGSRQVLEMLA 337
                        250       260
                 ....*....|....*....|....*
gi 435304079 241 QAKLTPYLDELGFNLVGYGCTTCIG 265
Cdd:PRK07229 338 RDGALADLIAAGARILENACGPCIG 362
AcnA_Bact cd01585
Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA ...
3-265 1.82e-32

Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle; Bacterial Aconitase-like catalytic domain. Aconitase (aconitate hydratase or citrate hydrolyase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Cis-aconitate is formed as an intermediate product during the course of the reaction. This distinct subfamily is found only in bacteria and Archaea. Its exact characteristics are not known.


Pssm-ID: 153135  Cd Length: 380  Bit Score: 122.56  E-value: 1.82e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   3 MLIPDVVGFKLTGKLREGITATDLVLtvtQMLRKHGV---VGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPID 79
Cdd:cd01585  122 IPMPKVVGVRLTGELPPWVTAKDVIL---ELLRRLTVkggVGKIFEYTGPGVATLSVPERATITNMGAELGATTSIFPSD 198
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  80 AITLEYMRLSGRSDDLVELVeayakaqgmwrnPGDEPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVpkafaasaele 159
Cdd:cd01585  199 ERTREFLAAQGREDDWVELA------------ADADAEYDEEIEIDLSELEPLIARPHSPDNVVPVREV----------- 255
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 160 lntaqrDRQPVDYTmngqpyqlpdgavviaAITSCTNTSNPSVLMAAGLLAKKAVtlglkrQPWVKASLAPGSKVVSDYL 239
Cdd:cd01585  256 ------AGIKVDQV----------------AIGSCTNSSYEDLMTVAAILKGRRV------HPHVSMVVAPGSKQVLEML 307
                        250       260
                 ....*....|....*....|....*.
gi 435304079 240 AQAKLTPYLDELGFNLVGYGCTTCIG 265
Cdd:cd01585  308 ARNGALADLLAAGARILESACGPCIG 333
LeuC COG0065
Homoaconitase/3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] ...
6-272 6.53e-26

Homoaconitase/3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism]; Homoaconitase/3-isopropylmalate dehydratase large subunit is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis


Pssm-ID: 439835  Cd Length: 417  Bit Score: 105.11  E-value: 6.53e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   6 PDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAITLEY 85
Cdd:COG0065  156 PETMRIEVTGKLPPGVTAKDLILAIIGKIGADGATGKAIEFAGEAIRALSMEERMTLCNMAIEAGAKAGIIAPDETTFEY 235
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  86 MRlsGRsddlvelveAYAKAQGMWRNPGdePVFTSTLELDMGDVEASLAGPKRPQDRVALGDVpkafaasaelelntaqr 165
Cdd:COG0065  236 LK--GR---------PFAPWRTLKSDED--AVYDKEVEIDASDLEPQVAWPHSPDNVVPVSEL----------------- 285
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 166 DRQPVDYtmngqpyqlpdgavviAAITSCTNtsnpSVL----MAAGLLAkkavtlGLKRQPWVKASLAPGSKVVsdyLAQ 241
Cdd:COG0065  286 EGIKIDQ----------------VFIGSCTN----GRIedlrAAAEILK------GRKVAPGVRAIVVPGSQEV---YRQ 336
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 435304079 242 AKLTPYLDEL---GFNLVGYGCTTCIG-NSGPLPE 272
Cdd:COG0065  337 AEAEGLDEIFieaGAEWREPGCGMCLGmNMGVLAP 371
AcnA_Mitochondrial cd01584
Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA ...
6-265 1.56e-22

Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle; Mitochondrial aconitase A catalytic domain. Aconitase (also known as aconitate hydratase and citrate hydro-lyase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Cis-aconitate is formed as an intermediary product during the course of the reaction. In eukaryotes two isozymes of aconitase are known to exist: one found in the mitochondrial matrix and the other found in the cytoplasm. This is the mitochondrial form. The mitochondrial product is coded by a nuclear gene. Most members of this subfamily are mitochondrial but there are some bacterial members.


Pssm-ID: 153134  Cd Length: 412  Bit Score: 95.97  E-value: 1.56e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   6 PDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAITLEY 85
Cdd:cd01584  133 PKVIGVKLTGKLSGWTSPKDVILKVAGILTVKGGTGAIVEYFGPGVDSLSCTGMGTICNMGAEIGATTSVFPYNERMKKY 212
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  86 MRLSGRSdDLVELVEAYAKAQgmwRNPGDEPVFTSTLELDMGDVEASLAGPKRPQDRVALGDVPKafaasaelelnTAQR 165
Cdd:cd01584  213 LKATGRA-EIADLADEFKDDL---LVADEGAEYDQLIEINLSELEPHINGPFTPDLATPVSKFKE-----------VAEK 277
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 166 DRQPVDytmngqpyqlpdgaVVIAAITSCTNTSNPSVLMAAGlLAKKAVTLGLKrqPWVKASLAPGSKVVSDYLAQAKLT 245
Cdd:cd01584  278 NGWPLD--------------LRVGLIGSCTNSSYEDMGRAAS-IAKQALAHGLK--CKSIFTITPGSEQIRATIERDGLL 340
                        250       260
                 ....*....|....*....|
gi 435304079 246 PYLDELGFNLVGYGCTTCIG 265
Cdd:cd01584  341 QTFRDAGGIVLANACGPCIG 360
PRK12466 PRK12466
3-isopropylmalate dehydratase large subunit;
13-265 1.32e-19

3-isopropylmalate dehydratase large subunit;


Pssm-ID: 183543  Cd Length: 471  Bit Score: 88.04  E-value: 1.32e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  13 LTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAITLEYMRlsGRS 92
Cdd:PRK12466 172 VDGELPPGVTAKDLILALIARIGADGATGYAIEFAGEAIRALSMEGRMTLCNMAVEAGARGGLIAPDETTFDYLR--GRP 249
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  93 DDLVElvEAYAKAQGMWRN-PGDE-PVFTSTLELDMGDVEASLAGPKRPQDRVALGD-VPKAFAASAELELNTAQRdrqP 169
Cdd:PRK12466 250 RAPKG--ALWDAALAYWRTlRSDAdAVFDREVEIDAADIAPQVTWGTSPDQAVPITGrVPDPAAEADPARRAAMER---A 324
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 170 VDYtMNGQPYQLPDGAVVIAA-ITSCTNtSNPSVLMAAGllakkAVTLGLKRQPWVKASLAPGSKVVSDYLAQAKLTPYL 248
Cdd:PRK12466 325 LDY-MGLTPGTPLAGIPIDRVfIGSCTN-GRIEDLRAAA-----AVLRGRKVAPGVRAMVVPGSGAVRRQAEAEGLARIF 397
                        250
                 ....*....|....*..
gi 435304079 249 DELGFNLVGYGCTTCIG 265
Cdd:PRK12466 398 IAAGFEWREPGCSMCLA 414
PRK00402 PRK00402
3-isopropylmalate dehydratase large subunit; Reviewed
5-139 3.78e-19

3-isopropylmalate dehydratase large subunit; Reviewed


Pssm-ID: 234748  Cd Length: 418  Bit Score: 86.38  E-value: 3.78e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   5 IPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAITLE 84
Cdd:PRK00402 155 VPETIKVVLEGKLPPGVTAKDVILHIIGDIGVDGATYKALEFTGETIEALSMDERMTLANMAIEAGAKAGIFAPDEKTLE 234
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 435304079  85 YmrLSGRSDDLVELVEAYAKAqgmwrnpgdepVFTSTLELDMGDVEASLAGPKRP 139
Cdd:PRK00402 235 Y--LKERAGRDYKPWKSDEDA-----------EYEEVYEIDLSKLEPQVAAPHLP 276
PRK05478 PRK05478
3-isopropylmalate dehydratase large subunit;
2-265 7.05e-16

3-isopropylmalate dehydratase large subunit;


Pssm-ID: 235490  Cd Length: 466  Bit Score: 77.08  E-value: 7.05e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   2 SMLIpdvvgfKLTGKLREGITATDLVLTVtqmLRKHGV---VGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPI 78
Cdd:PRK05478 165 TMKI------EVDGKLPPGVTAKDIILAI---IGKIGTaggTGYVIEFAGEAIRALSMEGRMTICNMSIEAGARAGLVAP 235
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079  79 DAITLEYMRlsGRsdDLVELVEAYAKAQGMWRN-PGDE-PVFTSTLELDMGDVEASLAGPKRPQDRVAL-GDVPkafaaS 155
Cdd:PRK05478 236 DETTFEYLK--GR--PFAPKGEDWDKAVAYWKTlKSDEdAVFDKVVTLDAADIEPQVTWGTNPGQVISIdGKVP-----D 306
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079 156 AELELNTAQRD--RQPVDYtMNGQPYQ-LPDGAVVIAAITSCTNtSNPSVLMAAGLLAKkavtlGLKRQPWVKASLAPGS 232
Cdd:PRK05478 307 PEDFADPVKRAsaERALAY-MGLKPGTpITDIKIDKVFIGSCTN-SRIEDLRAAAAVVK-----GRKVAPGVRALVVPGS 379
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 435304079 233 KVVSdylAQAK---LTPYLDELGFNLVGYGCTTCIG 265
Cdd:PRK05478 380 GLVK---AQAEaegLDKIFIEAGFEWREPGCSMCLA 412
Homoaconitase cd01582
Homoaconitase and other uncharacterized proteins of the Aconitase family; Homoaconitase ...
5-80 1.16e-14

Homoaconitase and other uncharacterized proteins of the Aconitase family; Homoaconitase catalytic domain. Homoaconitase and other uncharacterized proteins of the Aconitase family. Homoaconitase is part of an unusual lysine biosynthesis pathway found only in filamentous fungi, in which lysine is synthesized via the alpha-aminoadipate pathway. In this pathway, homoaconitase catalyzes the conversion of cis-homoaconitic acid into homoisocitric acid. The reaction mechanism is believed to be similar to that of other aconitases.


Pssm-ID: 153132 [Multi-domain]  Cd Length: 363  Bit Score: 73.03  E-value: 1.16e-14
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 435304079   5 IPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDA 80
Cdd:cd01582  124 IPPVAKVELKGQLPKGVTGKDVIVALCGLFNKDQVLNHAIEFTGSGLNSLSVDTRLTIANMTTEWGALSGLFPTDA 199
PRK11413 PRK11413
putative hydratase; Provisional
6-139 4.71e-07

putative hydratase; Provisional


Pssm-ID: 183125 [Multi-domain]  Cd Length: 751  Bit Score: 50.78  E-value: 4.71e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435304079   6 PDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVV-GKFVEFYGDGLDSLPLADRATIANMSPEygATC--GFFPIDAIT 82
Cdd:PRK11413 183 PGVVAVYLTGKPAPGVGPQDVALAIIGAVFKNGYVkNKVMEFVGPGVSALSTDFRNGVDVMTTE--TTClsSIWQTDEEV 260
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 435304079  83 LEYMRLSGRSDDLVELveayakaqgmwrNPGDEPVFTSTLELDMGDVEASLAGPKRP 139
Cdd:PRK11413 261 HNWLALHGRGQDYCEL------------NPQPMAYYDGCISVDLSAIKPMIALPFHP 305
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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