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Conserved domains on  [gi|384468318|gb|EIE52754|]
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glycosyltransferase [Citreicella sp. 357]

Protein Classification

glycosyltransferase family protein( domain architecture ID 56)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Glycosyltransferase_GTB-type super family cl10013
glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases ...
2-404 3.93e-148

glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


The actual alignment was detected with superfamily member cd03818:

Pssm-ID: 471961 [Multi-domain]  Cd Length: 396  Bit Score: 426.01  E-value: 3.93e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318   2 KILCIHQNFPGQYKHLAPALAA-RGHEVVALTlkVKKPTRWQGVTILPYDIRGRSAKDI--HPWLQDFETKLIRATSCCN 78
Cdd:cd03818    1 NILFVHQNFPGQFKHLARHLARqPGNEVTFLT--RRNDQGIPGVRPVRYRPFRGVASPLegHRYVRDFEEGVLRGQAVLR 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  79 AAIALRKRGFVPDVILAHHGWGESLFLKDVWPQARMGLYCELYHQSLPVFTAFDPEFqrPQTQSDPLRLRLKNLNNRLHE 158
Cdd:cd03818   79 ALLALKREGFRPDVVVGHPGWGEALFVKDVFPDVPLIGYCEYYYRAEGADVGFDPEF--PLDLMIRCRLRNRNIALLLSL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 159 EIMDAGISPTAFQAGTFPDHWQDRITVAHDGVDTDLVVPGPNATLTVTDGRVLTREDEVITFINRNLEPYRGYHIFMRAL 238
Cdd:cd03818  157 EQADLGVTPTRWQRSLFPAAYRDRISVIHDGVDTDRLAPDPAARLRLLNGTELKAGDPVITYVARNLEPYRGFHVFMRAL 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 239 PDLLRRRPDAQVVLIGGDEVSYGAKAPDGTTWKQIFIDEIADrmppeDWARVHFLGRVPYDRFLSMMQVSRVHVYLTYPF 318
Cdd:cd03818  237 PRIQARRPDARVVVVGGDGVSYGSPPPDGGSWKQKMLAELGV-----DLERVHFVGKVPYDQYVRLLQLSDAHVYLTYPF 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 319 VLSWSLLEAMSAECAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKTCALLDDADARARMGRAARAFVRDGYDLrTRC 398
Cdd:cd03818  312 VLSWSLLEAMACGCPVIGSDTAPVREVIRDGRNGLLVDFFDPDALAAAVLELLEDPDRAAALRRAARRTVERSDSL-DVC 390

                 ....*.
gi 384468318 399 LPRHID 404
Cdd:cd03818  391 LARYLA 396
 
Name Accession Description Interval E-value
GT4_ExpC-like cd03818
Rhizobium meliloti ExpC and similar proteins; This family is most closely related to the GT4 ...
2-404 3.93e-148

Rhizobium meliloti ExpC and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).


Pssm-ID: 340845 [Multi-domain]  Cd Length: 396  Bit Score: 426.01  E-value: 3.93e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318   2 KILCIHQNFPGQYKHLAPALAA-RGHEVVALTlkVKKPTRWQGVTILPYDIRGRSAKDI--HPWLQDFETKLIRATSCCN 78
Cdd:cd03818    1 NILFVHQNFPGQFKHLARHLARqPGNEVTFLT--RRNDQGIPGVRPVRYRPFRGVASPLegHRYVRDFEEGVLRGQAVLR 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  79 AAIALRKRGFVPDVILAHHGWGESLFLKDVWPQARMGLYCELYHQSLPVFTAFDPEFqrPQTQSDPLRLRLKNLNNRLHE 158
Cdd:cd03818   79 ALLALKREGFRPDVVVGHPGWGEALFVKDVFPDVPLIGYCEYYYRAEGADVGFDPEF--PLDLMIRCRLRNRNIALLLSL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 159 EIMDAGISPTAFQAGTFPDHWQDRITVAHDGVDTDLVVPGPNATLTVTDGRVLTREDEVITFINRNLEPYRGYHIFMRAL 238
Cdd:cd03818  157 EQADLGVTPTRWQRSLFPAAYRDRISVIHDGVDTDRLAPDPAARLRLLNGTELKAGDPVITYVARNLEPYRGFHVFMRAL 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 239 PDLLRRRPDAQVVLIGGDEVSYGAKAPDGTTWKQIFIDEIADrmppeDWARVHFLGRVPYDRFLSMMQVSRVHVYLTYPF 318
Cdd:cd03818  237 PRIQARRPDARVVVVGGDGVSYGSPPPDGGSWKQKMLAELGV-----DLERVHFVGKVPYDQYVRLLQLSDAHVYLTYPF 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 319 VLSWSLLEAMSAECAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKTCALLDDADARARMGRAARAFVRDGYDLrTRC 398
Cdd:cd03818  312 VLSWSLLEAMACGCPVIGSDTAPVREVIRDGRNGLLVDFFDPDALAAAVLELLEDPDRAAALRRAARRTVERSDSL-DVC 390

                 ....*.
gi 384468318 399 LPRHID 404
Cdd:cd03818  391 LARYLA 396
Glyco_trans_4_3 pfam12000
Glycosyl transferase family 4 group; This domain is found associated with pfam00534.
24-195 4.70e-68

Glycosyl transferase family 4 group; This domain is found associated with pfam00534.


Pssm-ID: 432252  Cd Length: 168  Bit Score: 213.18  E-value: 4.70e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318   24 RGHEVVALTLKvkKPTRWQGVTILPYDIRGRSAKDIHPWLQDFETKLIRATSCCNAAIALRKRGFVPDVILAHHGWGESL 103
Cdd:pfam12000   1 RGHEVVFLTER--KDGELPGVRKVRYRPPRGPTPGAHPYVREFEAAVRRGQAVARAAQALRAEGFVPDVIVGHSGWGETL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  104 FLKDVWPQARMGLYCELYHQSLPVFTAFDPEFqrPQTQSDPLRLRLKNLNNRLHEEIMDAGISPTAFQAGTFPDHWQDRI 183
Cdd:pfam12000  79 FLKDVFPDAPLLGYFEFFYRAHGADVGFDPEF--PLSLDDRARLRLKNAPILLALASCDAGLSPTAWQRSQFPAEFRSKI 156
                         170
                  ....*....|..
gi 384468318  184 TVAHDGVDTDLV 195
Cdd:pfam12000 157 SVIHDGIDTDAF 168
RfaB COG0438
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
305-409 3.11e-12

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440207 [Multi-domain]  Cd Length: 123  Bit Score: 63.09  E-value: 3.11e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 305 MQVSRVHVYLTYPFVLSWSLLEAMSAECAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKTCALLDDADARARMGRAA 384
Cdd:COG0438   18 LAAADVFVLPSRSEGFGLVLLEAMAAGLPVIATDVGGLPEVIEDGETGLLVPPGDPEALAEAILRLLEDPELRRRLGEAA 97
                         90       100
                 ....*....|....*....|....*
gi 384468318 385 RAFVRDGYDLRtRCLPRHIDWVEDL 409
Cdd:COG0438   98 RERAEERFSWE-AIAERLLALYEEL 121
 
Name Accession Description Interval E-value
GT4_ExpC-like cd03818
Rhizobium meliloti ExpC and similar proteins; This family is most closely related to the GT4 ...
2-404 3.93e-148

Rhizobium meliloti ExpC and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).


Pssm-ID: 340845 [Multi-domain]  Cd Length: 396  Bit Score: 426.01  E-value: 3.93e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318   2 KILCIHQNFPGQYKHLAPALAA-RGHEVVALTlkVKKPTRWQGVTILPYDIRGRSAKDI--HPWLQDFETKLIRATSCCN 78
Cdd:cd03818    1 NILFVHQNFPGQFKHLARHLARqPGNEVTFLT--RRNDQGIPGVRPVRYRPFRGVASPLegHRYVRDFEEGVLRGQAVLR 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  79 AAIALRKRGFVPDVILAHHGWGESLFLKDVWPQARMGLYCELYHQSLPVFTAFDPEFqrPQTQSDPLRLRLKNLNNRLHE 158
Cdd:cd03818   79 ALLALKREGFRPDVVVGHPGWGEALFVKDVFPDVPLIGYCEYYYRAEGADVGFDPEF--PLDLMIRCRLRNRNIALLLSL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 159 EIMDAGISPTAFQAGTFPDHWQDRITVAHDGVDTDLVVPGPNATLTVTDGRVLTREDEVITFINRNLEPYRGYHIFMRAL 238
Cdd:cd03818  157 EQADLGVTPTRWQRSLFPAAYRDRISVIHDGVDTDRLAPDPAARLRLLNGTELKAGDPVITYVARNLEPYRGFHVFMRAL 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 239 PDLLRRRPDAQVVLIGGDEVSYGAKAPDGTTWKQIFIDEIADrmppeDWARVHFLGRVPYDRFLSMMQVSRVHVYLTYPF 318
Cdd:cd03818  237 PRIQARRPDARVVVVGGDGVSYGSPPPDGGSWKQKMLAELGV-----DLERVHFVGKVPYDQYVRLLQLSDAHVYLTYPF 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 319 VLSWSLLEAMSAECAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKTCALLDDADARARMGRAARAFVRDGYDLrTRC 398
Cdd:cd03818  312 VLSWSLLEAMACGCPVIGSDTAPVREVIRDGRNGLLVDFFDPDALAAAVLELLEDPDRAAALRRAARRTVERSDSL-DVC 390

                 ....*.
gi 384468318 399 LPRHID 404
Cdd:cd03818  391 LARYLA 396
Glyco_trans_4_3 pfam12000
Glycosyl transferase family 4 group; This domain is found associated with pfam00534.
24-195 4.70e-68

Glycosyl transferase family 4 group; This domain is found associated with pfam00534.


Pssm-ID: 432252  Cd Length: 168  Bit Score: 213.18  E-value: 4.70e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318   24 RGHEVVALTLKvkKPTRWQGVTILPYDIRGRSAKDIHPWLQDFETKLIRATSCCNAAIALRKRGFVPDVILAHHGWGESL 103
Cdd:pfam12000   1 RGHEVVFLTER--KDGELPGVRKVRYRPPRGPTPGAHPYVREFEAAVRRGQAVARAAQALRAEGFVPDVIVGHSGWGETL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  104 FLKDVWPQARMGLYCELYHQSLPVFTAFDPEFqrPQTQSDPLRLRLKNLNNRLHEEIMDAGISPTAFQAGTFPDHWQDRI 183
Cdd:pfam12000  79 FLKDVFPDAPLLGYFEFFYRAHGADVGFDPEF--PLSLDDRARLRLKNAPILLALASCDAGLSPTAWQRSQFPAEFRSKI 156
                         170
                  ....*....|..
gi 384468318  184 TVAHDGVDTDLV 195
Cdd:pfam12000 157 SVIHDGIDTDAF 168
GT4_PimA-like cd03801
phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 ...
16-373 3.47e-28

phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.


Pssm-ID: 340831 [Multi-domain]  Cd Length: 366  Bit Score: 114.17  E-value: 3.47e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  16 HLAPALAARGHEVVALTLkvkkptRWQGVTILPYDIRGRSAKDIHPWLQDFETKLIRAtsccnaaIALRKRGFVPDVILA 95
Cdd:cd03801   22 ELARALAARGHDVTVLTP------ADPGEPPEELEDGVIVPLLPSLAALLRARRLLRE-------LRPLLRLRKFDVVHA 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  96 HhGWGESLFLKDVWPQARMGLycelyhqslpVFTAFDPEFQRPQTQSDPLRLRLKNLNNRLHEeiMDAGISPTAFQAGTF 175
Cdd:cd03801   89 H-GLLAALLAALLALLLGAPL----------VVTLHGAEPGRLLLLLAAERRLLARAEALLRR--ADAVIAVSEALRDEL 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 176 PDHWQ---DRITVAHDGVDTDLVVPGPNATLTVTDGRVltredeVITFINRnLEPYRGYHIFMRALPDLLRRRPDAQVVL 252
Cdd:cd03801  156 RALGGippEKIVVIPNGVDLERFSPPLRRKLGIPPDRP------VLLFVGR-LSPRKGVDLLLEALAKLLRRGPDVRLVI 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 253 IGGDEVSYGAkapdgttwkqifideiADRMPPEDWARVHFLGRVPYDRFLSMMQVSRVHVYLTY--PFVLSwsLLEAMSA 330
Cdd:cd03801  229 VGGDGPLRAE----------------LEELELGLGDRVRFLGFVPDEELPALYAAADVFVLPSRyeGFGLV--VLEAMAA 290
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 384468318 331 ECAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKTCALLDD 373
Cdd:cd03801  291 GLPVVATDVGGLPEVVEDGEGGLVVPPDDVEALADALLRLLAD 333
Glycos_transf_1 pfam00534
Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease ...
214-373 2.43e-18

Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family.


Pssm-ID: 425737 [Multi-domain]  Cd Length: 158  Bit Score: 81.55  E-value: 2.43e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  214 EDEVITFINRnLEPYRGYHIFMRALPDLLRRRPDAQVVLIGGDEvsygakapdgttWKQIFIDEIADRMPPEdwaRVHFL 293
Cdd:pfam00534   1 KKKIILFVGR-LEPEKGLDLLIKAFALLKEKNPNLKLVIAGDGE------------EEKRLKKLAEKLGLGD---NVIFL 64
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  294 GRVPYDRFLSMMQVSRVHVYLTY--PFVLSwsLLEAMSAECAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKTCALL 371
Cdd:pfam00534  65 GFVSDEDLPELLKIADVFVLPSRyeGFGIV--LLEAMACGLPVIASDVGGPPEVVKDGETGFLVKPNNAEALAEAIDKLL 142

                  ..
gi 384468318  372 DD 373
Cdd:pfam00534 143 ED 144
GT4_GT28_WabH-like cd03811
family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; This family is most ...
2-373 1.96e-16

family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.


Pssm-ID: 340839 [Multi-domain]  Cd Length: 351  Bit Score: 80.09  E-value: 1.96e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318   2 KILCIHQNFPG-----QYKHLAPALAARGHEVVALTLKVKKPTRWQ-GVTILPYDIRGRSAKDIHPWLQDFETKLirats 75
Cdd:cd03811    1 KILFVIPSLSGggaerVLLNLANALDKRGYDVTLVLLRDEGDLDKQlNGDVKLIRLLIRVLKLIKLGLLKAILKL----- 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  76 ccnAAIALRKRgfvPDVILAHHGWGESLFLKdvwpqarmglyceLYHQSLPVFT--AFDPEFQRPQTQSDPLRLRLKNLN 153
Cdd:cd03811   76 ---KRILKRAK---PDVVISFLGFATYIVAK-------------LAAARSKVIAwiHSSLSKLYYLKKKLLLKLKLYKKA 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 154 NRLHeeimdaGISPTA---FQAgTFPDHwQDRITVAHDGVDTDLVVPGPNATLTVTDgrvltreDEVITFIN--RnLEPY 228
Cdd:cd03811  137 DKIV------CVSKGIkedLIR-LGPSP-PEKIEVIYNPIDIDRIRALAKEPILNEP-------EDGPVILAvgR-LDPQ 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 229 RGYHIFMRALPDLLRRRPDAQVVLIG-GDEvsygaKAPdgttwKQIFIDE--IADRmppedwarVHFLGRV--PYDrFLS 303
Cdd:cd03811  201 KGHDLLIEAFAKLRKKYPDVKLVILGdGPL-----REE-----LEKLAKElgLAER--------VIFLGFQsnPYP-YLK 261
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 384468318 304 MMQVsrvhvyltypFVLSwS--------LLEAMSAECAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKTCALLDD 373
Cdd:cd03811  262 KADL----------FVLS-SryegfpnvLLEAMALGTPVVSTDCPGPREILDDGENGLLVPDGDAAALAGILAALLQK 328
Glyco_trans_1_4 pfam13692
Glycosyl transferases group 1;
217-373 2.91e-15

Glycosyl transferases group 1;


Pssm-ID: 463957 [Multi-domain]  Cd Length: 138  Bit Score: 72.16  E-value: 2.91e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  217 VITFINRNLEPYRGYHIFMRALPDLLRRRPDAQVVLIGGDEVSYgakapdgttwkqifIDEIADRMPPedwaRVHFLGRV 296
Cdd:pfam13692   3 VILFVGRLHPNVKGVDYLLEAVPLLRKRDNDVRLVIVGDGPEEE--------------LEELAAGLED----RVIFTGFV 64
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 384468318  297 P-YDRFLSMMQVSrVHVYLTYPFvlSWSLLEAMSAECAIVASGTAPVREVLtEGETGVMVDFFDTDGIVEKTCALLDD 373
Cdd:pfam13692  65 EdLAELLAAADVF-VLPSLYEGF--GLKLLEAMAAGLPVVATDVGGIPELV-DGENGLLVPPGDPEALAEAILRLLED 138
GT4_WbuB-like cd03794
Escherichia coli WbuB and similar proteins; This family is most closely related to the GT1 ...
2-373 3.84e-14

Escherichia coli WbuB and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.


Pssm-ID: 340825 [Multi-domain]  Cd Length: 391  Bit Score: 73.53  E-value: 3.84e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318   2 KILCIHQNFP------GQYKH-LAPALAARGHEVVALTLKVKKPTRWQ---------GVTILPYDI--RGRSAKDIHPWl 63
Cdd:cd03794    1 KILLISQYYPppkgaaAARVYeLAKELVRRGHEVTVLTPSPNYPLGRIfagatetkdGIRVIRVKLgpIKKNGLIRRLL- 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  64 qdfetKLIRATscCNAAIALRKRGFVPDVILAHHG----WGESLFLK------------DVWPQARMGLYCELYHQSLPV 127
Cdd:cd03794   80 -----NYLSFA--LAALLKLLVREERPDVIIAYSPpitlGLAALLLKklrgapfildvrDLWPESLIALGVLKKGSLLKL 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 128 FTAFDpefqrpqtqsdplRLRLKN------LNNRLHEEIMDAGISPtafqagtfpdhwqDRITVAHDGVDTDLVVPGPNA 201
Cdd:cd03794  153 LKKLE-------------RKLYRLadaiivLSPGLKEYLLRKGVPK-------------EKIIVIPNWADLEEFKPPPKD 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 202 TLtvtdgRVLTREDEVITFI-NRNLEPYRGYHIFMRALpDLLRRRPDAQVVLIG-GDEVsygakapdgttwkqifiDEIA 279
Cdd:cd03794  207 EL-----RKKLGLDDKFVVVyAGNIGKAQGLETLLEAA-ERLKRRPDIRFLFVGdGDEK-----------------ERLK 263
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 280 DRMPPEDWARVHFLGRVPYDRFLSMMQVSRVHvYLTYPFVLSWS------LLEAMSAECAIVASGTAPVREVLTEGETGV 353
Cdd:cd03794  264 ELAKARGLDNVTFLGRVPKEEVPELLSAADVG-LVPLKDNPANRgsspskLFEYMAAGKPILASDDGGSDLAVEINGCGL 342
                        410       420
                 ....*....|....*....|
gi 384468318 354 MVDFFDTDGIVEKTCALLDD 373
Cdd:cd03794  343 VVEPGDPEALADAILELLDD 362
RfaB COG0438
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
305-409 3.11e-12

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440207 [Multi-domain]  Cd Length: 123  Bit Score: 63.09  E-value: 3.11e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 305 MQVSRVHVYLTYPFVLSWSLLEAMSAECAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKTCALLDDADARARMGRAA 384
Cdd:COG0438   18 LAAADVFVLPSRSEGFGLVLLEAMAAGLPVIATDVGGLPEVIEDGETGLLVPPGDPEALAEAILRLLEDPELRRRLGEAA 97
                         90       100
                 ....*....|....*....|....*
gi 384468318 385 RAFVRDGYDLRtRCLPRHIDWVEDL 409
Cdd:COG0438   98 RERAEERFSWE-AIAERLLALYEEL 121
GT4_WavL-like cd03819
Vibrio cholerae WavL and similar sequences; This family is most closely related to the GT4 ...
17-363 7.56e-11

Vibrio cholerae WavL and similar sequences; This family is most closely related to the GT4 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.


Pssm-ID: 340846 [Multi-domain]  Cd Length: 345  Bit Score: 63.14  E-value: 7.56e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  17 LAPALAARGHEVVALTLKVKKPTRWQGvTILPYDIRGRsakdihPWLQDFETKLIRAtsccnaAIALRKRgfvPDVILAH 96
Cdd:cd03819   20 LARALAERGHRVLVVTAGGPLLPRLRQ-IGIGLPGLKV------PLLRALLGNVRLA------RLIRRER---IDLIHAH 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  97 H---GWgeSLFLKDVWPQARmglYCELYHQSLPVFTAFDPEFQRPQTQSDPLRLRLKNLNNRLheeIMDAGISPtafqag 173
Cdd:cd03819   84 SrapAW--LGWLASRLTGVP---LVTTVHGSYLATYHPKDFALAVRARGDRVIAVSELVRDHL---IEALGVDP------ 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 174 tfpdhwqDRITVAHDGVDTDLVVPGPNATLTVTDGrvLTREDEVITFINRnLEPYRGYHIFMRALPDLLRRRPdaQVVLI 253
Cdd:cd03819  150 -------ERIRVIPNGVDTDRFPPEAEAEERAQLG--LPEGKPVVGYVGR-LSPEKGWLLLVDAAAELKDEPD--FRLLV 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 254 GGDevsyGAKAPdgttwkqiFIDEIADRMPPEDwaRVHFLGRVpyDRFLSMMQVSRVHVYLTYPFVLSWSLLEAMSAECA 333
Cdd:cd03819  218 AGD----GPERD--------EIRRLVERLGLRD--RVTFTGFR--EDVPAALAASDVVVLPSLHEEFGRVALEAMACGTP 281
                        330       340       350
                 ....*....|....*....|....*....|
gi 384468318 334 IVASGTAPVREVLTEGETGVMVDFFDTDGI 363
Cdd:cd03819  282 VVATDVGGAREIVVHGRTGLLVPPGDAEAL 311
GT4_sucrose_synthase cd03800
sucrose-phosphate synthase and similar proteins; This family is most closely related to the ...
16-373 5.99e-10

sucrose-phosphate synthase and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.


Pssm-ID: 340830 [Multi-domain]  Cd Length: 398  Bit Score: 60.72  E-value: 5.99e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  16 HLAPALAARGHEVVALTLKV--KKPT--RW-QGVTIL-----PYdiRGRSAKDIHPWLQDFetkliratsCCNAAIALRK 85
Cdd:cd03800   29 ELARALAELGYQVDIFTRRIspADPEvvEIaPGARVIrvpagPP--EYLPKEELWPYLEEF---------ADGLLRFIAR 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  86 RGFVPDVILAHH---GWGESLfLKDVW--PQarmglyCELYHqSLpvfTAFDPEFQRPQTQSDPlRLRLKnlnnrlHEE- 159
Cdd:cd03800   98 EGGRYDLIHSHYwdsGLVGAL-LARRLgvPL------VHTFH-SL---GRVKYRHLGAQDTYHP-SLRIT------AEEq 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 160 IMDAG---ISPTAFQAGTFPDHWQ---DRITVAHDGVDTDLVVPGPNATLTVTdgRVLTREDE-VITFINRnLEPYRGYH 232
Cdd:cd03800  160 ILEAAdrvIASTPQEADELISLYGadpSRINVVPPGVDLERFFPVDRAEARRA--RLLLPPDKpVVLALGR-LDPRKGID 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 233 IFMRALPDLLRRRPDAQVVLIGGDEVSYGAKAPdgttwkqIFIDEIADRMPPEDwaRVHFLGRVPYDRFLSMMQVSRVHV 312
Cdd:cd03800  237 TLVRAFAQLPELRELANLVLVGGPSDDPLSMDR-------EELAELAEELGLID--RVRFPGRVSRDDLPELYRAADVFV 307
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 384468318 313 Y--LTYPFVLSwsLLEAMSAECAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKTCALLDD 373
Cdd:cd03800  308 VpsLYEPFGLT--AIEAMACGTPVVATAVGGLQDIVRDGRTGLLVDPHDPEALAAALRRLLDD 368
GT4-like cd05844
glycosyltransferase family 4 proteins; Glycosyltransferases catalyze the transfer of sugar ...
181-396 1.12e-09

glycosyltransferase family 4 proteins; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to glycosyltransferase family 4 (GT4). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340860 [Multi-domain]  Cd Length: 365  Bit Score: 59.77  E-value: 1.12e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 181 DRITVAHDGVDTDLVVPGPNATltvtdgrvltrEDEVITFINRNLEpYRGYHIFMRALPDLLRRRPDAQVVLIGGdevsy 260
Cdd:cd05844  166 ERIHVHYIGIDPAKFAPRDPAE-----------RAPTILFVGRLVE-KKGCDVLIEAFRRLAARHPTARLVIAGD----- 228
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 261 GAKAPdgttwkqifidEIADRMPPEDwaRVHFLGRVPYDRFLSMMQVSRVhvyLTYPFVLSWS---------LLEAMSAE 331
Cdd:cd05844  229 GPLRP-----------ALQALAAALG--RVRFLGALPHAEVQDWMRRAEI---FCLPSVTAASgdseglgivLLEAAACG 292
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 384468318 332 CAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKTCALLDDADARARMGRAARAFVRDGYDLRT 396
Cdd:cd05844  293 VPVVSSRHGGIPEAILDGETGFLVPEGDVDALADALQALLADRALADRMGGAARAFVCEQFDIRV 357
Glycosyltransferase_GTB-type cd01635
glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases ...
182-352 3.73e-09

glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340816 [Multi-domain]  Cd Length: 235  Bit Score: 57.03  E-value: 3.73e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 182 RITVAHDGVDTDLVVPGPNATLTVTDGRVLTREDevitFINRnLEPYRGYHIFMRALPDLLRRRPDAQVVLIGGDEVSYG 261
Cdd:cd01635   81 IVVTVHGPDSLESTRSELLALARLLVSLPLADKV----SVGR-LVPEKGIDLLLEALALLKARLPDLVLVLVGGGGEREE 155
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 262 AKApdgttwkqifidEIADRMppeDWARVHFLGRVPYDRFLSMMQvSRVHVYLTYPF--VLSWSLLEAMSAECAIVASGT 339
Cdd:cd01635  156 EEA------------LAAALG---LLERVVIIGGLVDDEVLELLL-AAADVFVLPSRseGFGLVLLEAMAAGKPVIATDV 219
                        170
                 ....*....|...
gi 384468318 340 APVREVLTEGETG 352
Cdd:cd01635  220 GGIPEFVVDGENG 232
GT4_MtfB-like cd03809
glycosyltransferases MtfB, WbpX, and similar proteins; This family is most closely related to ...
181-375 3.87e-09

glycosyltransferases MtfB, WbpX, and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.


Pssm-ID: 340838 [Multi-domain]  Cd Length: 362  Bit Score: 57.76  E-value: 3.87e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 181 DRITVAHDGVDTDLVVPGPNATLTVTDGRVltreDEVITFINrNLEPYRGYHIFMRALPDLLRRRPDAQVVLIGGDEvsy 260
Cdd:cd03809  162 EKIVVIPLGVDPSFFPPESAAVLIAKYLLP----EPYFLYVG-TLEPRKNHERLLKAFALLKKQGGDLKLVIVGGKG--- 233
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 261 gakapdgttWKqiFIDEIADRMPPEDWARVHFLGRVPYDRFLSMMQVSRVHVYLTY--PFVLSwsLLEAMSAECAIVASG 338
Cdd:cd03809  234 ---------WE--DEELLDLVKKLGLGGRVRFLGYVSDEDLPALYRGARAFVFPSLyeGFGLP--VLEAMACGTPVIASN 300
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 384468318 339 TAPVREVLteGETGVMVDFFDTDGIVEKTCALLDDAD 375
Cdd:cd03809  301 ISVLPEVA--GDAALYFDPLDPESIADAILRLLEDPS 335
GT4_ExpE7-like cd03823
glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 ...
2-373 2.17e-08

glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).


Pssm-ID: 340850 [Multi-domain]  Cd Length: 357  Bit Score: 55.41  E-value: 2.17e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318   2 KILCIHQNFPGQY--------KHLAPALAARGHEVVALTLKVKKPtrWQGVTILPYDIRGRSAKDIHPWLQ------DFE 67
Cdd:cd03823    1 KILLVNSLYPPQRvggaeisvHDLAEALVAEGHEVAVLTAGVGPP--GQATVARSVVRYRRAPDETLPLALkrrgyeLFE 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  68 TKLIRATSCCNAAIALRKrgfvPDVILAHH--GWGESlflkdVWPQARmglycelyHQSLP-VFTAFDPEFQRP-QTQSD 143
Cdd:cd03823   79 TYNPGLRRLLARLLEDFR----PDVVHTHNlsGLGAS-----LLDAAR--------DLGIPvVHTLHDYWLLCPrQFLFK 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 144 PLRlrlknlnnrlheeimDAGISPTAFQAGTFPDH--WQDRITVAHDGVDTDLVVPGPnatltvtdgRVLTREDEVITFI 221
Cdd:cd03823  142 KGG---------------DAVLAPSRFTANLHEANglFSARISVIPNAVEPDLAPPPR---------RRPGTERLRFGYI 197
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 222 NRnLEPYRGYHIFMRALPDLlrRRPDAQVVLIGGDEVSYGAKAPDGTtwkqifideiadrmppedwaRVHFLGRVPYDRF 301
Cdd:cd03823  198 GR-LTEEKGIDLLVEAFKRL--PREDIELVIAGHGPLSDERQIEGGR--------------------RIAFLGRVPTDDI 254
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 384468318 302 LSMMQvsRVHVYL-------TYPFVlswsLLEAMSAECAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKTCALLDD 373
Cdd:cd03823  255 KDFYE--KIDVLVvpsiwpePFGLV----VREAIAAGLPVIASDLGGIAELIQPGVNGLLFAPGDAEDLAAAMRRLLTD 327
GT4_WbnK-like cd03807
Shigella dysenteriae WbnK and similar proteins; This family is most closely related to the GT4 ...
181-380 1.73e-07

Shigella dysenteriae WbnK and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.


Pssm-ID: 340836 [Multi-domain]  Cd Length: 362  Bit Score: 52.70  E-value: 1.73e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 181 DRITVAHDGVDTDLVVPGPNATLTVTDGRVLTREDEVITFINRnLEPYRGYHIFMRALPDLLRRRPDAQVVLIGGDEVSy 260
Cdd:cd03807  156 NKIVVIYNGIDLFKLSPDDASRARARRRLGLAEDRRVIGIVGR-LHPVKDHSDLLRAAALLVETHPDLRLLLVGRGPER- 233
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 261 gakaPDgttwkqifIDEIADRMPPEDwaRVHFLGR---VPydRFLSMMQVsrvhvyltypFVLSW-------SLLEAMSA 330
Cdd:cd03807  234 ----PN--------LERLLLELGLED--RVHLLGErsdVP--ALLPAMDI----------FVLSSrtegfpnALLEAMAC 287
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 384468318 331 ECAIVASGTAPVREVLTEGeTGVMVDFFDTDGIVEKTCALLDDADARARM 380
Cdd:cd03807  288 GLPVVATDVGGAAELVDDG-TGFLVPAGDPQALADAIRALLEDPEKRARL 336
GT4_mannosyltransferase-like cd03822
mannosyltransferases of glycosyltransferase family 4 and similar proteins; This family is most ...
78-373 5.57e-07

mannosyltransferases of glycosyltransferase family 4 and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.


Pssm-ID: 340849 [Multi-domain]  Cd Length: 370  Bit Score: 51.23  E-value: 5.57e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  78 NAAIALRKRGfvPDVILAHHGWGeslFLKDvwpqaRMGLY--CELYHQSLPVFTAFdpefQRPQTQSDPLRLRLKNLNN- 154
Cdd:cd03822   66 RLLDHLNFKK--PDVVHIQHEFG---IFGG-----KYGLYalGLLLHLRIPVITTL----HTVLDLSDPGKQALKVLFRi 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 155 -RLHEEIMDAGISpTAFQAGTFPDHWQDRITVAHDGV-DTDLV-VPGPNATLTVTDGRVLtredevITF--INrnlePYR 229
Cdd:cd03822  132 aTLSERVVVMAPI-SRFLLVRIKLIPAVNIEVIPHGVpEVPQDpTTALKRLLLPEGKKVI------LTFgfIG----PGK 200
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 230 GYHIFMRALPDLLRRRPDAQVVLIGGDEVSYGAKAPDGTTWKQIfideiaDRMPPEDWARVHfLGRVPYD---RFLSMMq 306
Cdd:cd03822  201 GLEILLEALPELKAEFPDVRLVIAGELHPSLARYEGERYRKAAI------EELGLQDHVDFH-NNFLPEEevpRYISAA- 272
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 384468318 307 vsrvHVYLT-YPFVL---SWSLLEAMSAECAIVASGTAPVREVLTEGEtGVMVDFFDTDGIVEKTCALLDD 373
Cdd:cd03822  273 ----DVVVLpYLNTEqssSGTLSYAIACGKPVISTPLRHAEELLADGR-GVLVPFDDPSAIAEAILRLLED 338
GT4_WlbH-like cd03798
Bordetella parapertussis WlbH and similar proteins; This family is most closely related to the ...
180-373 6.96e-07

Bordetella parapertussis WlbH and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.


Pssm-ID: 340828 [Multi-domain]  Cd Length: 376  Bit Score: 50.84  E-value: 6.96e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 180 QDRITVAHDGVDTDLVVPGPNATLTVTDGRVltredevITFINRnLEPYRGYHIFMRALPDLLRRRPDAQVVLIGGDevs 259
Cdd:cd03798  172 RDRVDVIPNGVDPARFQPEDRGLGLPLDAFV-------ILFVGR-LIPRKGIDLLLEAFARLAKARPDVVLLIVGDG--- 240
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 260 ygakaPDGTTWKQIFIDEIADrmppedwARVHFLGRVPYD---RFLSMMQVsrvhvyltypFVL-SWS------LLEAMS 329
Cdd:cd03798  241 -----PLREALRALAEDLGLG-------DRVTFTGRLPHEqvpAYYRACDV----------FVLpSRHegfglvLLEAMA 298
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 384468318 330 AECAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKTCALLDD 373
Cdd:cd03798  299 CGLPVVATDVGGIPEVVGDPETGLLVPPGDADALAAALRRALAE 342
GT4_CapM-like cd03808
capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins; This ...
2-395 2.70e-06

capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. CapM in Staphylococcus aureus is required for the synthesis of type 1 capsular polysaccharides.


Pssm-ID: 340837 [Multi-domain]  Cd Length: 358  Bit Score: 49.13  E-value: 2.70e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318   2 KILCIHQNFPGQYKH---LAPALAARGHEVVALT----LKVKKPTRwQGVTILPYDIRGRSakdIHPwLQDFET-----K 69
Cdd:cd03808    1 KILFIVNVDGGFQSFrlpLIKALVKKGYEVHVIApdgdKLSDELKE-LGVKVIDIPILRRG---INP-LKDLKAlfklyK 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318  70 LIRATSC----CNAAIA------LRKRGFVPDVILAHHGWGeSLFLKDVWPQArmgLYCELYHQSLP----VFTafdpef 135
Cdd:cd03808   76 LLKKEKPdivhCHTPKPgilgrlAARLAGVPKVIYTVHGLG-FVFTEGKLLRL---LYLLLEKLALLftdkVIF------ 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 136 qrpqtQSDPLRLRLKNLNNRLHEEImdagisptafqagtfpdhwqdrITVAHDGVDTDLVVPGPNatltvtdgrVLTRED 215
Cdd:cd03808  146 -----VNEDDRDLAIKKGIIKKKKT----------------------VLIPGSGVDLDRFQYSPE---------SLPSEK 189
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 216 EVITFINRNLEPyRGYHIFMRALPDLLRRRPDAQVVLIGGDEVsygaKAPDGTTWKQIFIDEiadrmppedwaRVHFLG- 294
Cdd:cd03808  190 VVFLFVARLLKD-KGIDELIEAAKILKKKGPNVRFLLVGDGEL----ENPSEILIEKLGLEG-----------RIEFLGf 253
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 295 RVPYDRFLSMMQVsrvhvyltypFVL-SW------SLLEAMSAECAIVASGTAPVREVLTEGETGVMVDFFDTDGIVEKT 367
Cdd:cd03808  254 RSDVPELLAESDV----------FVLpSYreglprSLLEAMAAGRPVITTDVPGCRELVIDGVNGFLVPPGDVEALADAI 323
                        410       420
                 ....*....|....*....|....*...
gi 384468318 368 CALLDDADARARMGRAARAFVRDGYDLR 395
Cdd:cd03808  324 EKLIEDPELRKEMGEAARKRVEEKFDEE 351
GT4_BshA-like cd04962
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA and similar proteins; This family is most ...
280-373 1.30e-05

N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes.


Pssm-ID: 340859 [Multi-domain]  Cd Length: 370  Bit Score: 46.96  E-value: 1.30e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 280 DRMPPEDWAR-------VHFLGRVpyDRFLSMMQVSRVHVYLTYPFVLSWSLLEAMSAECAIVASGTAPVREVLTEGETG 352
Cdd:cd04962  237 ERVPAEELARelgvedrVLFLGKQ--DDVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVSSNAGGIPEVVKHGETG 314
                         90       100
                 ....*....|....*....|.
gi 384468318 353 VMVDFFDTDGIVEKTCALLDD 373
Cdd:cd04962  315 FLSDVGDVDAMAKSALSILED 335
GT4_AmsD-like cd03820
amylovoran biosynthesis glycosyltransferase AmsD and similar proteins; This family is most ...
213-382 6.34e-03

amylovoran biosynthesis glycosyltransferase AmsD and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.


Pssm-ID: 340847 [Multi-domain]  Cd Length: 351  Bit Score: 38.37  E-value: 6.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 213 REDEVITFINRnLEPYRGYHIFMRALPDLLRRRPDAQVVLIGgdevsygakapDGTtwKQIFIDEIADRMPPEDwaRVHF 292
Cdd:cd03820  179 LKSKRILAVGR-LTYQKGFDLLIEAWALIAKKHPDWKLRIYG-----------DGP--EREELEKLIDKLGLED--RVKL 242
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384468318 293 LGRVpydrflsmmqvSRVHVYltYP----FVLS--W-----SLLEAMSAECAIVASG--TAPvREVLTEGETGVMVDFFD 359
Cdd:cd03820  243 LGPT-----------KNIAEE--YAnssiFVLSsrYegfpmVLLEAMAYGLPIISFDcpTGP-SEIIEDGENGLLVPNGD 308
                        170       180
                 ....*....|....*....|...
gi 384468318 360 TDGIVEKTCALLDDADARARMGR 382
Cdd:cd03820  309 VDALAEALLRLMEDEELRKKMGK 331
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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