|
Name |
Accession |
Description |
Interval |
E-value |
| PRK08294 |
PRK08294 |
phenol 2-monooxygenase; Provisional |
7-622 |
6.14e-119 |
|
phenol 2-monooxygenase; Provisional
Pssm-ID: 236223 [Multi-domain] Cd Length: 634 Bit Score: 367.78 E-value: 6.14e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 7 EKYDIVIVGAGPVGIVLSLCMSRW-GYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMAfKPAKVYDVAFWDP 85
Cdd:PRK08294 31 DEVDVLIVGCGPAGLTLAAQLSAFpDITTRIVERKPGRLELGQADGIACRTMEMFQAFGFAERILK-EAYWINETAFWKP 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 86 LPGGQD-IHRTGswpscpRFIDT-----RYPFTtLVHQGKIERVFLDEIQKAGTTVErP---WTIVGFKNDGlDETYPVE 156
Cdd:PRK08294 110 DPADPStIVRTG------RVQDTedglsEFPHV-IVNQARVHDYFLDVMRNSPTRLE-PdygREFVDLEVDE-EGEYPVT 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 157 VQLKSID---TNVIETVRTKYLFSGEGARSFIRQQLGIQIQyKDPISYVWGVMDGVVRTNFPDIETKCTIHS-DAGSIMV 232
Cdd:PRK08294 181 VTLRRTDgehEGEEETVRAKYVVGCDGARSRVRKAIGRELR-GDSANHAWGVMDVLAVTDFPDIRLKCAIQSaSEGSILL 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 233 IPREDN-MVRLYVQIASSDDPDFDPRKTATAEDVQATARKILQPYWVEWDRVEWYSVYPIGQGISEKY---------TLD 302
Cdd:PRK08294 260 IPREGGyLVRLYVDLGEVPPDERVAVRNTTVEEVIAKAQRILHPYTLDVKEVAWWSVYEVGQRLTDRFddvpaeeagTRL 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 303 ERVFMGGDACHTHSPKAGQGMNTAFHDALNMAWKLHAVESGLAKRSILSTYETERKDIAETLLSFDNKYAALFSKrRPTA 382
Cdd:PRK08294 340 PRVFIAGDACHTHSAKAGQGMNVSMQDGFNLGWKLAAVLSGRSPPELLHTYSAERQAIAQELIDFDREWSTMMAA-PPKE 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 383 GEVGEASHTtaaaggeEDEFVKTfkssCEFTSGYGVAYKPNVFTWDATHPAQSPLFDVpgvrltpGRAFTPTTVTRLADS 462
Cdd:PRK08294 419 GGGVDPAEL-------QDYFVKH----GRFTAGTATHYAPSLLTGEATHQDLATGFPI-------GKRFHSAPVIRLADA 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 463 NHVHLEQEIPANGAFRIFIFAGKQDKTSK--AITDLAANLEK-ERSFLSVYRR--ADIADVsffenhlphsklFSICLVY 537
Cdd:PRK08294 481 KPVHLGHAATADGRWRIYAFADAADPAGPgsALDALCEFLAEsPDSPLRRFTPsgADIDAV------------IDVRAIF 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 538 AGEKNQIDVDSIPKI---------LRDYHHHLYAD----NIPDVRvpqatyaaheklGFDVEKGGVVVTRPDSHVACTIQ 604
Cdd:PRK08294 549 QQPHRELDLEDVPALllprkgrfgLTDYEKVFCADlsgaDIFDLR------------GIDRDRGAVVVVRPDQYVANVLP 616
|
650
....*....|....*...
gi 350632776 605 LSEgsgtVDALNAFFGSF 622
Cdd:PRK08294 617 LDA----HAELAAFFAGF 630
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
8-368 |
2.17e-59 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 202.56 E-value: 2.17e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 8 KYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMAFKPAKVYDVAFWDPLP 87
Cdd:pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPRAHGLNQRTMELLRQAGLEDRILAEGVPHEGMGLAFYNTR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 88 GGQDIHrtgswpscprfIDTRYPFTTLVHQGKIERVFLDEIQKAGTTVERPWTIVGFKNDGldetYPVEVQLKSIDTNVI 167
Cdd:pfam01494 81 RRADLD-----------FLTSPPRVTVYPQTELEPILVEHAEARGAQVRFGTEVLSLEQDG----DGVTAVVRDRRDGEE 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 168 ETVRTKYLFSGEGARSFIRQQLGIQIQYKDPISyvWGVMDGVVRT-NFPDIETKCTIH-----SDAGSIMVIPREDNMVR 241
Cdd:pfam01494 146 YTVRAKYLVGCDGGRSPVRKTLGIEFEGFEGVP--FGSLDVLFDApDLSDPVERAFVHyliyaPHSRGFMVGPWRSAGRE 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 242 LYVQIASSDDPDFDPRKTATAEDVQATARKILQPYWVEwDRVEWYSVYPIGQGISEKYTLDeRVFMGGDACHTHSPKAGQ 321
Cdd:pfam01494 224 RYYVQVPWDEEVEERPEEFTDEELKQRLRSIVGIDLAL-VEILWKSIWGVASRVATRYRKG-RVFLAGDAAHIHPPTGGQ 301
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 350632776 322 GMNTAFHDALNMAWKLHAVESGLAKRSILSTYETERKDIAETLLSFD 368
Cdd:pfam01494 302 GLNTAIQDAFNLAWKLAAVLRGQAGESLLDTYSAERLPVAWAVVDFA 348
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
6-382 |
3.92e-50 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 177.05 E-value: 3.92e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 6 QEKYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMAfKPAKVYDVAFWDP 85
Cdd:COG0654 1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLA-RGAPIRGIRVRDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 86 LPGGQdIHRTgswpscpRFIDTRYPFTTLVHQGKIERVFLDEIQKAGTTVERPWTIVGFKNDGldetYPVEVQLKSidtn 165
Cdd:COG0654 80 SDGRV-LARF-------DAAETGLPAGLVVPRADLERALLEAARALGVELRFGTEVTGLEQDA----DGVTVTLAD---- 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 166 vIETVRTKYLFSGEGARSFIRQQLGIQIQYKD-PISYVWGVMDGVVRTNFPDietkctIHSDAGSIMviprednmvrlyv 244
Cdd:COG0654 144 -GRTLRADLVVGADGARSAVRRLLGIGFTGRDyPQRALWAGVRTELRARLAA------AGPRLGELL------------- 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 245 qiassddpdfdprktataedvqatarkilqpywvewdRVEWYSVYPIGQGISEKYTlDERVFMGGDACHTHSPKAGQGMN 324
Cdd:COG0654 204 -------------------------------------ELSPRSAFPLRRRRAERWR-RGRVVLLGDAAHTMHPLGGQGAN 245
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 350632776 325 TAFHDALNMAWKLHAVESGLAKRSILSTYETERKDIAETLLSFDNKYAALFSKRRPTA 382
Cdd:COG0654 246 LALRDAAALAWKLAAALRGRDDEAALARYERERRPRAARVQRAADALGRLFHPDSPPL 303
|
|
| PHOX_C |
cd02979 |
FAD-dependent Phenol hydoxylase (PHOX) family, C-terminal TRX-fold domain; composed of ... |
448-622 |
7.65e-38 |
|
FAD-dependent Phenol hydoxylase (PHOX) family, C-terminal TRX-fold domain; composed of proteins similar to PHOX from the aerobic topsoil yeast Trichosporon cutaneum. PHOX is a flavoprotein monooxygenase that catalyzes the hydroxylation of phenol and simple phenol derivatives in the ortho position with the consumption of NADPH and oxygen. This is the first step in the biodegradation and detoxification of phenolic compounds. PHOX contains three domains. The substrate and FAD/NAD(P) binding sites are contained in the first two domains, which adopt a complicated folding pattern. The third or C-terminal domain contains a TRX fold and is involved in dimerization. The functional unit of PHOX is a dimer, although active tetramers of the recombinant enzyme can be isolated when overproduced in bacteria.
Pssm-ID: 239277 [Multi-domain] Cd Length: 167 Bit Score: 137.80 E-value: 7.65e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 448 GRAFTPTTVTRLADSNHVHLEQEIPANGAFRIFIFAGKQDK--TSKAITDLAANLEKERSFLSVYRRAdiadvsffenHL 525
Cdd:cd02979 1 GRRFPSAPVVRQADALPVHLGHRLPADGRFRIYVFAGDIAPaqQKSRLTQLCDALDSPDSFPLRYTPR----------GA 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 526 PHSKLFSICLVYAGEKNQIDVDSIPKILR-------DYHHHLYADnipDVRVPQATYAAHEKLGFDVEKGGVVVTRPDSH 598
Cdd:cd02979 71 DPDSVFDVVTIHAAPRREIELLDLPAVLRpfgekkgWDYEKIYAD---DDSYHEGHGDAYEKYGIDPERGAVVVVRPDQY 147
|
170 180
....*....|....*....|....
gi 350632776 599 VACTIQLsegsGTVDALNAFFGSF 622
Cdd:cd02979 148 VALVGPL----DDVEALEAYFAGF 167
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
10-380 |
4.09e-15 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 77.63 E-value: 4.09e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 10 DIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPV-----PTATGRADGIQPRSTEILRNLGLKRQIMAFKPAKVYDVAFWD 84
Cdd:TIGR01988 1 DIVIVGGGMVGLALALALARSGLKVALIEATPLpapadPGFDNRVSALSAASIRLLEKLGVWDKIEPARAQPIRDIHVSD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 85 PLPGGQ------DIHRTgswpscprfidtryPFTTLVHQGKIERVFLDEIQKA-GTTVERPWTIVGFKNDGlDEtypVEV 157
Cdd:TIGR01988 81 GGSFGAlrfdadEIGLE--------------ALGYVVENRVLQQALWERLQELpNVTLLCPARVVELPRHS-DH---VEL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 158 QLKSIDtnvieTVRTKYLFSGEGARSFIRQQLGIQIQYKDpisYVWGVMDGVVRTNFPDIETKCTIHSDAGSIMVIPRED 237
Cdd:TIGR01988 143 TLDDGQ-----QLRARLLVGADGANSKVRQLAGIPTTGWD---YGQSAVVANVKHERPHQGTAWERFTPTGPLALLPLPD 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 238 NMVRLyV---------QIASSDDPDFdprktaTAEdVQATARKILQPYWVEWDRvewySVYPIGQGISEKYtLDERVFMG 308
Cdd:TIGR01988 215 NRSSL-VwtlppeeaeRLLALSDEEF------LAE-LQRAFGSRLGAITLVGER----HAFPLSLTHAKRY-VAPRLALI 281
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 350632776 309 GDACHTHSPKAGQGMNTAFHDALNMAWKLH-AVESG--LAKRSILSTYETERK-DIAETLLSFDnKYAALFSKRRP 380
Cdd:TIGR01988 282 GDAAHTIHPLAGQGLNLGLRDVAALAEVLEdARRRGedIGSLRVLQRYERRRRfDNAAMLGATD-GLNRLFSNDFP 356
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK08294 |
PRK08294 |
phenol 2-monooxygenase; Provisional |
7-622 |
6.14e-119 |
|
phenol 2-monooxygenase; Provisional
Pssm-ID: 236223 [Multi-domain] Cd Length: 634 Bit Score: 367.78 E-value: 6.14e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 7 EKYDIVIVGAGPVGIVLSLCMSRW-GYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMAfKPAKVYDVAFWDP 85
Cdd:PRK08294 31 DEVDVLIVGCGPAGLTLAAQLSAFpDITTRIVERKPGRLELGQADGIACRTMEMFQAFGFAERILK-EAYWINETAFWKP 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 86 LPGGQD-IHRTGswpscpRFIDT-----RYPFTtLVHQGKIERVFLDEIQKAGTTVErP---WTIVGFKNDGlDETYPVE 156
Cdd:PRK08294 110 DPADPStIVRTG------RVQDTedglsEFPHV-IVNQARVHDYFLDVMRNSPTRLE-PdygREFVDLEVDE-EGEYPVT 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 157 VQLKSID---TNVIETVRTKYLFSGEGARSFIRQQLGIQIQyKDPISYVWGVMDGVVRTNFPDIETKCTIHS-DAGSIMV 232
Cdd:PRK08294 181 VTLRRTDgehEGEEETVRAKYVVGCDGARSRVRKAIGRELR-GDSANHAWGVMDVLAVTDFPDIRLKCAIQSaSEGSILL 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 233 IPREDN-MVRLYVQIASSDDPDFDPRKTATAEDVQATARKILQPYWVEWDRVEWYSVYPIGQGISEKY---------TLD 302
Cdd:PRK08294 260 IPREGGyLVRLYVDLGEVPPDERVAVRNTTVEEVIAKAQRILHPYTLDVKEVAWWSVYEVGQRLTDRFddvpaeeagTRL 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 303 ERVFMGGDACHTHSPKAGQGMNTAFHDALNMAWKLHAVESGLAKRSILSTYETERKDIAETLLSFDNKYAALFSKrRPTA 382
Cdd:PRK08294 340 PRVFIAGDACHTHSAKAGQGMNVSMQDGFNLGWKLAAVLSGRSPPELLHTYSAERQAIAQELIDFDREWSTMMAA-PPKE 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 383 GEVGEASHTtaaaggeEDEFVKTfkssCEFTSGYGVAYKPNVFTWDATHPAQSPLFDVpgvrltpGRAFTPTTVTRLADS 462
Cdd:PRK08294 419 GGGVDPAEL-------QDYFVKH----GRFTAGTATHYAPSLLTGEATHQDLATGFPI-------GKRFHSAPVIRLADA 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 463 NHVHLEQEIPANGAFRIFIFAGKQDKTSK--AITDLAANLEK-ERSFLSVYRR--ADIADVsffenhlphsklFSICLVY 537
Cdd:PRK08294 481 KPVHLGHAATADGRWRIYAFADAADPAGPgsALDALCEFLAEsPDSPLRRFTPsgADIDAV------------IDVRAIF 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 538 AGEKNQIDVDSIPKI---------LRDYHHHLYAD----NIPDVRvpqatyaaheklGFDVEKGGVVVTRPDSHVACTIQ 604
Cdd:PRK08294 549 QQPHRELDLEDVPALllprkgrfgLTDYEKVFCADlsgaDIFDLR------------GIDRDRGAVVVVRPDQYVANVLP 616
|
650
....*....|....*...
gi 350632776 605 LSEgsgtVDALNAFFGSF 622
Cdd:PRK08294 617 LDA----HAELAAFFAGF 630
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
8-368 |
2.17e-59 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 202.56 E-value: 2.17e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 8 KYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMAFKPAKVYDVAFWDPLP 87
Cdd:pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPRAHGLNQRTMELLRQAGLEDRILAEGVPHEGMGLAFYNTR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 88 GGQDIHrtgswpscprfIDTRYPFTTLVHQGKIERVFLDEIQKAGTTVERPWTIVGFKNDGldetYPVEVQLKSIDTNVI 167
Cdd:pfam01494 81 RRADLD-----------FLTSPPRVTVYPQTELEPILVEHAEARGAQVRFGTEVLSLEQDG----DGVTAVVRDRRDGEE 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 168 ETVRTKYLFSGEGARSFIRQQLGIQIQYKDPISyvWGVMDGVVRT-NFPDIETKCTIH-----SDAGSIMVIPREDNMVR 241
Cdd:pfam01494 146 YTVRAKYLVGCDGGRSPVRKTLGIEFEGFEGVP--FGSLDVLFDApDLSDPVERAFVHyliyaPHSRGFMVGPWRSAGRE 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 242 LYVQIASSDDPDFDPRKTATAEDVQATARKILQPYWVEwDRVEWYSVYPIGQGISEKYTLDeRVFMGGDACHTHSPKAGQ 321
Cdd:pfam01494 224 RYYVQVPWDEEVEERPEEFTDEELKQRLRSIVGIDLAL-VEILWKSIWGVASRVATRYRKG-RVFLAGDAAHIHPPTGGQ 301
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 350632776 322 GMNTAFHDALNMAWKLHAVESGLAKRSILSTYETERKDIAETLLSFD 368
Cdd:pfam01494 302 GLNTAIQDAFNLAWKLAAVLRGQAGESLLDTYSAERLPVAWAVVDFA 348
|
|
| PRK07190 |
PRK07190 |
FAD-binding protein; |
10-420 |
9.01e-52 |
|
FAD-binding protein;
Pssm-ID: 235955 [Multi-domain] Cd Length: 487 Bit Score: 185.79 E-value: 9.01e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 10 DIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMAF-KPAKVYDVafWdplPG 88
Cdd:PRK07190 7 DVVIIGAGPVGLMCAYLGQLCGLNTVIVDKSDGPLEVGRADALNARTLQLLELVDLFDELYPLgKPCNTSSV--W---AN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 89 GQDIHRTGSW----PSC--PRFIdtrypfttLVHQGKIERVFLDEIQKAGTTVERPWTIVGfkndgldetypVEVQLKSI 162
Cdd:PRK07190 82 GKFISRQSSWweelEGClhKHFL--------MLGQSYVEKLLDDKLKEAGAAVKRNTSVVN-----------IELNQAGC 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 163 DTNVI--ETVRTKYLFSGEGARSFIRQQLGIQIQYKDPiSYVWGVMDGVVRTNFPDIETKCTIHSDAGSIMVIPREDNMV 240
Cdd:PRK07190 143 LTTLSngERIQSRYVIGADGSRSFVRNHFNVPFEIIRP-QIIWAVIDGVIDTDFPKVPEIIVFQAETSDVAWIPREGEID 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 241 RLYVQIassDDPDFdprktaTAEDVQATARKILQPYWVEWDRVEWYSVYPIGQGISEKYTLDERVFMGGDACHTHSPKAG 320
Cdd:PRK07190 222 RFYVRM---DTKDF------TLEQAIAKINHAMQPHRLGFKEIVWFSQFSVKESVAEHFFIQDRIFLAGDACHIHSVNGG 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 321 QGMNTAFHDALNMAWKLHAVESGLAKRSILSTYETERKDIAETLLSfdnkyaalfskrrpTAGEVGEASHTTaAAGGEED 400
Cdd:PRK07190 293 QGLNTGLADAFNLIWKLNMVIHHGASPELLQSYEAERKPVAQGVIE--------------TSGELVRSTKYS-ANGTHAQ 357
|
410 420
....*....|....*....|
gi 350632776 401 EFVKTFKSSCEFTSGYGVAY 420
Cdd:PRK07190 358 DYVKIVEKRAGYITGMGIRY 377
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
6-382 |
3.92e-50 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 177.05 E-value: 3.92e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 6 QEKYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMAfKPAKVYDVAFWDP 85
Cdd:COG0654 1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLA-RGAPIRGIRVRDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 86 LPGGQdIHRTgswpscpRFIDTRYPFTTLVHQGKIERVFLDEIQKAGTTVERPWTIVGFKNDGldetYPVEVQLKSidtn 165
Cdd:COG0654 80 SDGRV-LARF-------DAAETGLPAGLVVPRADLERALLEAARALGVELRFGTEVTGLEQDA----DGVTVTLAD---- 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 166 vIETVRTKYLFSGEGARSFIRQQLGIQIQYKD-PISYVWGVMDGVVRTNFPDietkctIHSDAGSIMviprednmvrlyv 244
Cdd:COG0654 144 -GRTLRADLVVGADGARSAVRRLLGIGFTGRDyPQRALWAGVRTELRARLAA------AGPRLGELL------------- 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 245 qiassddpdfdprktataedvqatarkilqpywvewdRVEWYSVYPIGQGISEKYTlDERVFMGGDACHTHSPKAGQGMN 324
Cdd:COG0654 204 -------------------------------------ELSPRSAFPLRRRRAERWR-RGRVVLLGDAAHTMHPLGGQGAN 245
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 350632776 325 TAFHDALNMAWKLHAVESGLAKRSILSTYETERKDIAETLLSFDNKYAALFSKRRPTA 382
Cdd:COG0654 246 LALRDAAALAWKLAAALRGRDDEAALARYERERRPRAARVQRAADALGRLFHPDSPPL 303
|
|
| Phe_hydrox_dim |
pfam07976 |
Phenol hydroxylase, C-terminal dimerization domain; Phenol hydroxylase acts a homodimer, to ... |
412-588 |
2.19e-45 |
|
Phenol hydroxylase, C-terminal dimerization domain; Phenol hydroxylase acts a homodimer, to hydroxylates phenol to catechol or similar product. The enzyme is comprised of three domains. The first two domains from the active site. The third domain, this domain, is involved in forming the dimerization interface. The domain adopts a thioredoxin-like fold.
Pssm-ID: 429765 Cd Length: 166 Bit Score: 158.47 E-value: 2.19e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 412 FTSGYGVAYKPNVFTWDATHPAQSPlfdvpgvRLTPGRAFTPTTVTRLADSNHVHLEQEIPANGAFRIFIFAG--KQDKT 489
Cdd:pfam07976 1 FTSGVGVDYGPSILVAGTSHQNLAS-------GLPVGRRFPSAKVVRQADANPVHLQDELPSDGRFRILVFAGdiSDPAQ 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 490 SKAITDLAANLEKERSFLSVYRRADIadvsffenhlPHSKLFSICLVYAGEKNQIDVDSIPKILR--------DYhHHLY 561
Cdd:pfam07976 74 KSRLEALADYLSSSSSFLSRYTPAGA----------DIDSVFDVLLIHSAPRTEVELEDLPEVLRpfdgklgwDY-WKVY 142
|
170 180
....*....|....*....|....*..
gi 350632776 562 ADNIPDVRVPQatyAAHEKLGFDVEKG 588
Cdd:pfam07976 143 VDDESYHEGGG---DAYEKYGIDPKRG 166
|
|
| PRK06184 |
PRK06184 |
hypothetical protein; Provisional |
10-365 |
2.12e-44 |
|
hypothetical protein; Provisional
Pssm-ID: 235728 [Multi-domain] Cd Length: 502 Bit Score: 165.54 E-value: 2.12e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 10 DIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMA----FKPAKVY----DVA 81
Cdd:PRK06184 5 DVLIVGAGPTGLTLAIELARRGVSFRLIEKAPEPFPGSRGKGIQPRTQEVFDDLGVLDRVVAagglYPPMRIYrddgSVA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 82 FWDPLPGGQDIHrtgswpscprfiDTRYPFTTLVHQGKIERVFLDEIQKAGTTVERPWTIVGFKNDglDETypVEVQLKS 161
Cdd:PRK06184 85 ESDMFAHLEPTP------------DEPYPLPLMVPQWRTERILRERLAELGHRVEFGCELVGFEQD--ADG--VTARVAG 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 162 IDTNviETVRTKYLFSGEGARSFIRQQLGIQIQYK----DPISYVWGVMDGVVRTN---FPdietkctiHSDAGSIMVIP 234
Cdd:PRK06184 149 PAGE--ETVRARYLVGADGGRSFVRKALGIGFPGEtlgiDRMLVADVSLTGLDRDAwhqWP--------DGDMGMIALCP 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 235 -REDNMVRLYVQIASSDDPDFdprktaTAEDVQA-----TARKilqpyWVEWDRVEWYSVYPIGQGISEKYTlDERVFMG 308
Cdd:PRK06184 219 lPGTDLFQIQAPLPPGGEPDL------SADGLTAllaerTGRT-----DIRLHSVTWASAFRMNARLADRYR-VGRVFLA 286
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 350632776 309 GDACHTHSPKAGQGMNTAFHDALNMAWKLHAVESGlAKRSILSTYETERKDIAETLL 365
Cdd:PRK06184 287 GDAAHVHPPAGGQGLNTSVQDAYNLGWKLAAVLAG-APEALLDTYEEERRPVAAAVL 342
|
|
| PHOX_C |
cd02979 |
FAD-dependent Phenol hydoxylase (PHOX) family, C-terminal TRX-fold domain; composed of ... |
448-622 |
7.65e-38 |
|
FAD-dependent Phenol hydoxylase (PHOX) family, C-terminal TRX-fold domain; composed of proteins similar to PHOX from the aerobic topsoil yeast Trichosporon cutaneum. PHOX is a flavoprotein monooxygenase that catalyzes the hydroxylation of phenol and simple phenol derivatives in the ortho position with the consumption of NADPH and oxygen. This is the first step in the biodegradation and detoxification of phenolic compounds. PHOX contains three domains. The substrate and FAD/NAD(P) binding sites are contained in the first two domains, which adopt a complicated folding pattern. The third or C-terminal domain contains a TRX fold and is involved in dimerization. The functional unit of PHOX is a dimer, although active tetramers of the recombinant enzyme can be isolated when overproduced in bacteria.
Pssm-ID: 239277 [Multi-domain] Cd Length: 167 Bit Score: 137.80 E-value: 7.65e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 448 GRAFTPTTVTRLADSNHVHLEQEIPANGAFRIFIFAGKQDK--TSKAITDLAANLEKERSFLSVYRRAdiadvsffenHL 525
Cdd:cd02979 1 GRRFPSAPVVRQADALPVHLGHRLPADGRFRIYVFAGDIAPaqQKSRLTQLCDALDSPDSFPLRYTPR----------GA 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 526 PHSKLFSICLVYAGEKNQIDVDSIPKILR-------DYHHHLYADnipDVRVPQATYAAHEKLGFDVEKGGVVVTRPDSH 598
Cdd:cd02979 71 DPDSVFDVVTIHAAPRREIELLDLPAVLRpfgekkgWDYEKIYAD---DDSYHEGHGDAYEKYGIDPERGAVVVVRPDQY 147
|
170 180
....*....|....*....|....
gi 350632776 599 VACTIQLsegsGTVDALNAFFGSF 622
Cdd:cd02979 148 VALVGPL----DDVEALEAYFAGF 167
|
|
| PRK08244 |
PRK08244 |
monooxygenase; |
8-365 |
1.53e-36 |
|
monooxygenase;
Pssm-ID: 236199 [Multi-domain] Cd Length: 493 Bit Score: 143.35 E-value: 1.53e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 8 KYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQimaFKPAKvydvafwDPLP 87
Cdd:PRK08244 2 KYEVIIIGGGPVGLMLASELALAGVKTCVIERLKETVPYSKALTLHPRTLEILDMRGLLER---FLEKG-------RKLP 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 88 GGqdiH----RTGSWPSCprfIDTRYPFTTLVHQGKIERVFLDEIQKAGTTVERPWTIVGFKNDGldetypVEVQLKSID 163
Cdd:PRK08244 72 SG---HfaglDTRLDFSA---LDTSSNYTLFLPQAETEKVLEEHARSLGVEIFRGAEVLAVRQDG------DGVEVVVRG 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 164 TNVIETVRTKYLFSGEGARSFIRQQLGIQIQYKDpiSYVWGVMDGVVRTNFPD--IETKCTihsDAGSIMVIPREDNMVR 241
Cdd:PRK08244 140 PDGLRTLTSSYVVGADGAGSIVRKQAGIAFPGTD--ATFTAMLGDVVLKDPPPssVLSLCT---REGGVMIVPLSGGIYR 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 242 lyVQIASSDDPDFDPRKTATAEDVQATARKILQPYWVEWDRVeWYSVYPIGQGISEKYTlDERVFMGGDACHTHSPKAGQ 321
Cdd:PRK08244 215 --VLIIDPERPQVPKDEPVTLEELKTSLIRICGTDFGLNDPV-WMSRFGNATRQAERYR-SGRIFLAGDAAHIHFPAGGQ 290
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 350632776 322 GMNTAFHDALNMAWKLHAVESGLAKRSILSTYETERKDIAETLL 365
Cdd:PRK08244 291 GLNVGLQDAMNLGWKLAAAIKGWAPDWLLDSYHAERHPVGTALL 334
|
|
| PRK06126 |
PRK06126 |
hypothetical protein; Provisional |
2-362 |
8.04e-33 |
|
hypothetical protein; Provisional
Pssm-ID: 235704 [Multi-domain] Cd Length: 545 Bit Score: 133.19 E-value: 8.04e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 2 APSQQEKYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMA--FKPAKVYD 79
Cdd:PRK06126 1 AMENTSETPVLIVGGGPVGLALALDLGRRGVDSILVERKDGTAFNPKANTTSARSMEHFRRLGIADEVRSagLPVDYPTD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 80 VAFWDPLpGGQDIHR-----TGSWPSCPRFIDTRYPFTTLVHQgkIERVFLDEI------QKAGTTVERPWTIVGFKNDG 148
Cdd:PRK06126 81 IAYFTRL-TGYELARfrlpsAREAITPVGGPDGSWPSPELPHR--IPQKYLEPIllehaaAQPGVTLRYGHRLTDFEQDA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 149 lDEtypVEVQLKSIDTNVIETVRTKYLFSGEGARSFIRQQLGIQIQYKDPISYVWGVMdgvVRTnfPDIETKCTiHSDAG 228
Cdd:PRK06126 158 -DG---VTATVEDLDGGESLTIRADYLVGCDGARSAVRRSLGISYEGTSGLQRDLSIY---IRA--PGLAALVG-HDPAW 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 229 SIMVIPREDNMVrlYVQIASSDD------PDFDPRKTATAEDVQATARKIL-QPYWVEWDRVE-WYSVypigQGISEKYT 300
Cdd:PRK06126 228 MYWLFNPDRRGV--LVAIDGRDEwlfhqlRGGEDEFTIDDVDARAFVRRGVgEDIDYEVLSVVpWTGR----RLVADSYR 301
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 350632776 301 lDERVFMGGDACHTHSPKAGQGMNTAFHDALNMAWKLHAVESGLAKRSILSTYETERKDIAE 362
Cdd:PRK06126 302 -RGRVFLAGDAAHLFTPTGGYGMNTGIGDAVNLAWKLAAVLNGWAGPALLDSYEAERRPIAA 362
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
2-367 |
1.10e-25 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 111.15 E-value: 1.10e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 2 APSQQEKYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMAF-KPAkvYDV 80
Cdd:PRK06183 4 QHPDAHDTDVVIVGAGPVGLTLANLLGQYGVRVLVLERWPTLYDLPRAVGIDDEALRVLQAIGLADEVLPHtTPN--HGM 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 81 AFWDPlpGGQ---DIHRTGS----WPscprfidTRYPFttlvHQGKIERVFLDEIQK-AGTTVERPWTIVGFKNDGldet 152
Cdd:PRK06183 82 RFLDA--KGRclaEIARPSTgefgWP-------RRNAF----HQPLLEAVLRAGLARfPHVRVRFGHEVTALTQDD---- 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 153 YPVEVQLKSIDTNViETVRTKYLFSGEGARSFIRQQLGIQIQYKDPiSYVWGVMDGVVRTN---FPDIETKCtihsDAgs 229
Cdd:PRK06183 145 DGVTVTLTDADGQR-ETVRARYVVGCDGANSFVRRTLGVPFEDLTF-PERWLVVDVLIANDplgGPHTYQYC----DP-- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 230 imviprednmVRLYVQIASSDD---------PDFDPRKTATAEdvqaTARKILQPYWVEWDRVEW--YSVYPIGQGISEK 298
Cdd:PRK06183 217 ----------ARPYTSVRLPHGrrrwefmllPGETEEQLASPE----NVWRLLAPWGPTPDDAELirHAVYTFHARVADR 282
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 350632776 299 YTlDERVFMGGDACHTHSPKAGQGMNTAFHDALNMAWKLHAVESGLAKRSILSTYETERKDIAETLLSF 367
Cdd:PRK06183 283 WR-SGRVLLAGDAAHLMPPFAGQGMNSGIRDAANLAWKLAAVLRGRAGDALLDTYEQERRPHARAMIDL 350
|
|
| PRK06834 |
PRK06834 |
hypothetical protein; Provisional |
8-365 |
4.29e-25 |
|
hypothetical protein; Provisional
Pssm-ID: 235870 [Multi-domain] Cd Length: 488 Bit Score: 108.95 E-value: 4.29e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 8 KYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATG-RADGIQPRSTEILRNLGL-KRQIMAFKPAKVYDVAfWDP 85
Cdd:PRK06834 3 EHAVVIAGGGPTGLMLAGELALAGVDVAIVERRPNQELVGsRAGGLHARTLEVLDQRGIaDRFLAQGQVAQVTGFA-ATR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 86 LpggqDIhrtGSWPscprfidTRYPFTTLVHQGKIERVFLDEIQKAGTTVERPWTIVGFKNDGLDetypVEVQLKSIdtn 165
Cdd:PRK06834 82 L----DI---SDFP-------TRHNYGLALWQNHIERILAEWVGELGVPIYRGREVTGFAQDDTG----VDVELSDG--- 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 166 viETVRTKYLFSGEGARSFIRQQLGIQIQYKDP-ISYVWGV--MDGvvrtnfpdiETKCTIHSDAGSIMVIPRE--DNMV 240
Cdd:PRK06834 141 --RTLRAQYLVGCDGGRSLVRKAAGIDFPGWDPtTSYLIAEveMTE---------EPEWGVHRDALGIHAFGRLedEGPV 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 241 RLYV---QIASSDDPDFDPRKTA-TAedVQATARKILQPYWVewdrvewySVYPIGQGISEKYTlDERVFMGGDACHTHS 316
Cdd:PRK06834 210 RVMVtekQVGATGEPTLDDLREAlIA--VYGTDYGIHSPTWI--------SRFTDMARQAASYR-DGRVLLAGDAAHVHS 278
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 350632776 317 PKAGQGMNTAFHDALNMAWKLHAVESGLAKRSILSTYETERKDIAETLL 365
Cdd:PRK06834 279 PVGGQGLNTGVQDAVNLGWKLAQVVKGTSPESLLDTYHAERHPVAARVL 327
|
|
| PRK08132 |
PRK08132 |
FAD-dependent oxidoreductase; Provisional |
8-357 |
1.77e-17 |
|
FAD-dependent oxidoreductase; Provisional
Pssm-ID: 236158 [Multi-domain] Cd Length: 547 Bit Score: 86.08 E-value: 1.77e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 8 KYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMA-----------FKPAK 76
Cdd:PRK08132 23 RHPVVVVGAGPVGLALAIDLAQQGVPVVLLDDDDTLSTGSRAICFAKRSLEIFDRLGCGERMVDkgvswnvgkvfLRDEE 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 77 VYDvafWDPLPggQDIHRtgswpscprfidtRYPFTTLvHQGKIERVFLDEIQkAGTTVERPW----TIVGFKNDGldet 152
Cdd:PRK08132 103 VYR---FDLLP--EPGHR-------------RPAFINL-QQYYVEGYLVERAQ-ALPNIDLRWknkvTGLEQHDDG---- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 153 ypveVQLkSIDT-NVIETVRTKYLFSGEGARSFIRQQLGIQIQ---YKDpiSYVwgVMDGVVRTNFPdieTKCTIHSD-- 226
Cdd:PRK08132 159 ----VTL-TVETpDGPYTLEADWVIACDGARSPLREMLGLEFEgrtFED--RFL--IADVKMKADFP---TERWFWFDpp 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 227 --AG-SIMVIPREDNMVRLYVQIAssddPDFDPRKTATAEDVQATARKILQPYwVEWDrVEWYSVYPIGQGISEKYTLDe 303
Cdd:PRK08132 227 fhPGqSVLLHRQPDNVWRIDFQLG----WDADPEAEKKPENVIPRVRALLGED-VPFE-LEWVSVYTFQCRRMDRFRHG- 299
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 350632776 304 RVFMGGDACHTHSPKAGQGMNTAFHDALNMAWKLHAVESGLAKRSILSTYETER 357
Cdd:PRK08132 300 RVLFAGDAAHQVSPFGARGANSGIQDADNLAWKLALVLRGRAPDSLLDSYASER 353
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
10-380 |
4.09e-15 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 77.63 E-value: 4.09e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 10 DIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPV-----PTATGRADGIQPRSTEILRNLGLKRQIMAFKPAKVYDVAFWD 84
Cdd:TIGR01988 1 DIVIVGGGMVGLALALALARSGLKVALIEATPLpapadPGFDNRVSALSAASIRLLEKLGVWDKIEPARAQPIRDIHVSD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 85 PLPGGQ------DIHRTgswpscprfidtryPFTTLVHQGKIERVFLDEIQKA-GTTVERPWTIVGFKNDGlDEtypVEV 157
Cdd:TIGR01988 81 GGSFGAlrfdadEIGLE--------------ALGYVVENRVLQQALWERLQELpNVTLLCPARVVELPRHS-DH---VEL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 158 QLKSIDtnvieTVRTKYLFSGEGARSFIRQQLGIQIQYKDpisYVWGVMDGVVRTNFPDIETKCTIHSDAGSIMVIPRED 237
Cdd:TIGR01988 143 TLDDGQ-----QLRARLLVGADGANSKVRQLAGIPTTGWD---YGQSAVVANVKHERPHQGTAWERFTPTGPLALLPLPD 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 238 NMVRLyV---------QIASSDDPDFdprktaTAEdVQATARKILQPYWVEWDRvewySVYPIGQGISEKYtLDERVFMG 308
Cdd:TIGR01988 215 NRSSL-VwtlppeeaeRLLALSDEEF------LAE-LQRAFGSRLGAITLVGER----HAFPLSLTHAKRY-VAPRLALI 281
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 350632776 309 GDACHTHSPKAGQGMNTAFHDALNMAWKLH-AVESG--LAKRSILSTYETERK-DIAETLLSFDnKYAALFSKRRP 380
Cdd:TIGR01988 282 GDAAHTIHPLAGQGLNLGLRDVAALAEVLEdARRRGedIGSLRVLQRYERRRRfDNAAMLGATD-GLNRLFSNDFP 356
|
|
| PRK07364 |
PRK07364 |
FAD-dependent hydroxylase; |
9-378 |
4.44e-13 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236001 [Multi-domain] Cd Length: 415 Bit Score: 71.59 E-value: 4.44e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 9 YDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTAT--GRADGIQPRSTEILRNLG----LKRQIMAFKPAKVYDVAF 82
Cdd:PRK07364 19 YDVAIVGGGIVGLTLAAALKDSGLRIALIEAQPAEAAAakGQAYALSLLSARIFEGIGvwekILPQIGKFRQIRLSDADY 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 83 wdplpggqdihrtgswPSCPRFIDTRYPFTTLVHQGKiERVFLDEIQKAGTTVER-----PWTIVGFKNdgldETYPVEV 157
Cdd:PRK07364 99 ----------------PGVVKFQPTDLGTEALGYVGE-HQVLLEALQEFLQSCPNitwlcPAEVVSVEY----QQDAATV 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 158 QLKSIDTNviETVRTKYLFSGEGARSFIRQQLGIQIQ-YKDPISYVwgvmDGVVRTNFPDIETKCTIHSDAGSIMVIPRE 236
Cdd:PRK07364 158 TLEIEGKQ--QTLQSKLVVAADGARSPIRQAAGIKTKgWKYWQSCV----TATVKHEAPHNDIAYERFWPSGPFAILPLP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 237 DNMVRLyVQIAssddPDFDPRKTATAEDVQATARkiLQPYWVEW--------DRvewySVYPIGQGISEKYTLDeRVFMG 308
Cdd:PRK07364 232 GNRCQI-VWTA----PHAQAKALLALPEAEFLAE--LQQRYGDQlgklellgDR----FLFPVQLMQSDRYVQH-RLALV 299
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 350632776 309 GDACHTHSPKAGQGMNTAFHDALNMAWKLH-AVESG--LAKRSILSTYETERKDIAETLLSFDNKYAALFSKR 378
Cdd:PRK07364 300 GDAAHCCHPVGGQGLNLGIRDAAALAQVLQtAHQRGedIGSLAVLKRYERWRKRENWLILGFTDLLDRLFSNQ 372
|
|
| PRK07608 |
PRK07608 |
UbiH/UbiF family hydroxylase; |
5-366 |
1.59e-10 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181057 [Multi-domain] Cd Length: 388 Bit Score: 63.43 E-value: 1.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 5 QQEKYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATG-----RADGIQPRSTEILRNLGLKRQIMAFKPAKVYD 79
Cdd:PRK07608 2 YHMKFDVVVVGGGLVGASLALALAQSGLRVALLAPRAPPRPADdawdsRVYAISPSSQAFLERLGVWQALDAARLAPVYD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 80 V-AFWDplpGGQDIHRTGSWPSCPR--FIdtrypfttlVHQGKIERVFLDEIQKAGTTVERPWTIVGFkndgldETYPVE 156
Cdd:PRK07608 82 MrVFGD---AHARLHFSAYQAGVPQlaWI---------VESSLIERALWAALRFQPNLTWFPARAQGL------EVDPDA 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 157 VQLKSIDTNVIetvRTKYLFSGEGARSFIRQQLGIQIqykDPISYvwgVMDGVVrTNF----PDIETKCTIHSDAGSIMV 232
Cdd:PRK07608 144 ATLTLADGQVL---RADLVVGADGAHSWVRSQAGIKA---ERRPY---RQTGVV-ANFkaerPHRGTAYQWFRDDGILAL 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 233 IPREDNMVRLyVQIASSDDPD----FDPRKTAtAEDVQATARkilqpywvEWDRVEwySVYPiGQG-----ISEKYTLDE 303
Cdd:PRK07608 214 LPLPDGHVSM-VWSARTAHADellaLSPEALA-ARVERASGG--------RLGRLE--CVTP-AAGfplrlQRVDRLVAP 280
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 350632776 304 RVFMGGDACHTHSPKAGQGMNTAFHDALNMAWKLHAVES--GLAKRSILSTYETERkdiAETLLS 366
Cdd:PRK07608 281 RVALVGDAAHLIHPLAGQGMNLGLRDVAALADVLAGREPfrDLGDLRLLRRYERAR---REDILA 342
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
16-257 |
4.54e-09 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 58.06 E-value: 4.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 16 AGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMafkpAKVYDVAFWdpLPGGQDIHrt 95
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPLGLDEPLE----RPVRGARFY--SPGGKSVE-- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 96 gswpscprfIDTRYPFTTLVHQGKIERVFLDEIQKAGTTVERPWTIVGFKNDGLDetypVEVQLKSidtnvIETVRTKYL 175
Cdd:COG0644 73 ---------LPPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGR----VVVRTGD-----GEEIRADYV 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 176 FSGEGARSFIRQQLGIQIQYKDPISY---VWGVMDGVVRTNFPDIETKCTIHSDA--GSIMVIPREDNMVRLYVQIASSD 250
Cdd:COG0644 135 VDADGARSLLARKLGLKRRSDEPQDYalaIKEHWELPPLEGVDPGAVEFFFGEGApgGYGWVFPLGDGRVSVGIPLGGPR 214
|
....*..
gi 350632776 251 DPDFDPR 257
Cdd:COG0644 215 PRLVGDG 221
|
|
| PRK05714 |
PRK05714 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional |
10-357 |
5.69e-09 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Pssm-ID: 168201 [Multi-domain] Cd Length: 405 Bit Score: 58.69 E-value: 5.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 10 DIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADG-IQPR-------STEILRNLGLKRQIMAFKPAKVYDVA 81
Cdd:PRK05714 4 DLLIVGAGMVGSALALALQGSGLEVLLLDGGPLSVKPFDPQApFEPRvsalsaaSQRILERLGAWDGIAARRASPYSEMQ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 82 FWDPLPGGQdIHRTGSwpscprfidtrypfttLVHQ---GKI--ERV----FLDEIQKAGTTVerpwtIVGFKNDGLDET 152
Cdd:PRK05714 84 VWDGSGTGQ-IHFSAA----------------SVHAevlGHIveNRVvqdaLLERLHDSDIGL-----LANARLEQMRRS 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 153 yPVEVQLKSIDTnviETVRTKYLFSGEGARSFIRQQLGIQIQYKDpisYVWGVMDGVVRTNFPDIETKCTIHSDAGSIMV 232
Cdd:PRK05714 142 -GDDWLLTLADG---RQLRAPLVVAADGANSAVRRLAGCATREWD---YLHHAIVTSVRCSEPHRATAWQRFTDDGPLAF 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 233 IPREDNMVRLYVQIASSDDPDFDPRktATAEDVQATARKILQPYwvEWDRVEWYSV-----YPIGQGISEKYtLDERVFM 307
Cdd:PRK05714 215 LPLERDGDEHWCSIVWSTTPEEAER--LMALDDDAFCAALERAF--EGRLGEVLSAdprlcVPLRQRHAKRY-VEPGLAL 289
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 350632776 308 GGDACHTHSPKAGQGMNTAFHDALNMAWKL-HAVESG--LAKRSILSTYETER 357
Cdd:PRK05714 290 IGDAAHTIHPLAGQGVNLGFLDAAVLAEVLlHAAERGerLADVRVLSRFERRR 342
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
7-330 |
6.76e-08 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 55.25 E-value: 6.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 7 EKYDIVIVGAGPVGIVLSLCMSRWGYKV----KHID-NRPVptatgRADGIQPRSTEILRNLGLKRQIMAFKPAKVYDVA 81
Cdd:PRK06185 5 ETTDCCIVGGGPAGMMLGLLLARAGVDVtvleKHADfLRDF-----RGDTVHPSTLELMDELGLLERFLELPHQKVRTLR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 82 FwdpLPGGQDIhrtgswpscpRFID-----TRYPFTTLVHQgkieRVFLDEI-QKA----------GTTV----ERPWTI 141
Cdd:PRK06185 80 F---EIGGRTV----------TLADfsrlpTPYPYIAMMPQ----WDFLDFLaEEAsaypnftlrmGAEVtgliEEGGRV 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 142 VGFKNDGLDETYpvevqlksidtnvieTVRTKYLFSGEGARSFIRQQLGIQIQYKD-PISYVWgvmdgvvrtnF-----P 215
Cdd:PRK06185 143 TGVRARTPDGPG---------------EIRADLVVGADGRHSRVRALAGLEVREFGaPMDVLW----------FrlpreP 197
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 216 DIETKCTIHSDAGSIMV-IPREDnmvrlYVQ----IASSDDPDF---------------DPRKTATAEDVQAtarkilqp 275
Cdd:PRK06185 198 DDPESLMGRFGPGQGLImIDRGD-----YWQcgyvIPKGGYAALraagleafrervaelAPELADRVAELKS-------- 264
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 350632776 276 ywveWDRVEWYSVYPigqGISEKYTLDERVFMgGDACHTHSPKAGQGMNTAFHDA 330
Cdd:PRK06185 265 ----WDDVKLLDVRV---DRLRRWHRPGLLCI-GDAAHAMSPVGGVGINLAIQDA 311
|
|
| PRK07045 |
PRK07045 |
putative monooxygenase; Reviewed |
10-398 |
1.18e-07 |
|
putative monooxygenase; Reviewed
Pssm-ID: 136171 [Multi-domain] Cd Length: 388 Bit Score: 54.53 E-value: 1.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 10 DIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMAfKPAKVYDV--AFWDPLP 87
Cdd:PRK07045 7 DVLINGSGIAGVALAHLLGARGHSVTVVERAARNRAQNGADLLKPSGIGVVRAMGLLDDVFA-AGGLRRDAmrLYHDKEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 88 GGQDIHRTGSwpSCPRFIdtrypfttLVHQGKIERVFLDEIQKAGTTVERPWTIVGFKNDGLDETypvevqLKSIDTNVI 167
Cdd:PRK07045 86 IASLDYRSAS--ALGYFI--------LIPCEQLRRLLLAKLDGLPNVRLRFETSIERIERDADGT------VTSVTLSDG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 168 ETVRTKYLFSGEGARSFIRQQL----GIQIQYKDPISY-VWGVMDGVVRTNfpdietKCTIHSDAGSIMVIPREDNMVRL 242
Cdd:PRK07045 150 ERVAPTVLVGADGARSMIRDDVlrmpAERVPYATPMAFgTIALTDSVRECN------RLYVDSNQGLAYFYPIGDQATRL 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 243 YVQIASSDDPDFdprktaTAEDVQATARKILQPYwVEWDRVEW---------YSVYPIGQGISEKYTLDErVFMGGDACH 313
Cdd:PRK07045 224 VVSFPADEMQGY------LADTTRTKLLARLNEF-VGDESADAmaaigagtaFPLIPLGRMNLDRYHKRN-VVLLGDAAH 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 314 THSPKAGQGMNTAFHDALNMAWKLHAVESG-LAKRSILSTYETERKDIAETLLSFDNKYAALFSKRRPTAG----EVGEA 388
Cdd:PRK07045 296 SIHPITGQGMNLAIEDAGELGACLDLHLSGqIALADALERFERIRRPVNEAVISYGHALATTYHDRAALVAnfrsQLQTS 375
|
410
....*....|
gi 350632776 389 SHTTAAAGGE 398
Cdd:PRK07045 376 GRDAAWLGAA 385
|
|
| PRK08850 |
PRK08850 |
2-octaprenyl-6-methoxyphenol hydroxylase; Validated |
10-380 |
1.71e-07 |
|
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Pssm-ID: 236341 [Multi-domain] Cd Length: 405 Bit Score: 54.01 E-value: 1.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 10 DIVIVGAGPVGIVLSLCMSRWGYKVKHIDNR-PVPTATG----RADGIQPRSTEILRNLGLKRQIMAFKPAKVYDVAFWD 84
Cdd:PRK08850 6 DVAIIGGGMVGLALAAALKESDLRIAVIEGQlPEEALNElpdvRVSALSRSSEHILRNLGAWQGIEARRAAPYIAMEVWE 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 85 plpggQDihrtgswpscpRFIDTRYPFTTLVHQ--GKI--ERV----FLDEIQKA-GTTVERPWTIvgfKNDGLDETypv 155
Cdd:PRK08850 86 -----QD-----------SFARIEFDAESMAQPdlGHIveNRViqlaLLEQVQKQdNVTLLMPARC---QSIAVGES--- 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 156 EVQLkSIDTNviETVRTKYLFSGEGARSFIRQQLGIQIQYKDpisYVWGVMDGVVRTNFPDIETKCTIHSDAGSIMVIP- 234
Cdd:PRK08850 144 EAWL-TLDNG--QALTAKLVVGADGANSWLRRQMDIPLTHWD---YGHSALVANVRTVDPHNSVARQIFTPQGPLAFLPm 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 235 REDNMVRLY--------VQIASSDDPDFDprKTATAE-DVQATARKilqpywVEWDRvewySVYPIgqgiSEKYTLD--- 302
Cdd:PRK08850 218 SEPNMSSIVwsteplraEALLAMSDEQFN--KALTAEfDNRLGLCE------VVGER----QAFPL----KMRYARDfvr 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 303 ERVFMGGDACHTHSPKAGQGMNTAFHDALNMAWK---LHAVESGLAKRSILSTYETERKDIAETLLSFDNKYAALFSKRR 379
Cdd:PRK08850 282 ERVALVGDAAHTIHPLAGQGVNLGLLDAASLAQEilaLWQQGRDIGLKRNLRGYERWRKAEAAKMIAAMQGFRDLFSGSN 361
|
.
gi 350632776 380 P 380
Cdd:PRK08850 362 P 362
|
|
| PRK08849 |
PRK08849 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional |
7-358 |
1.73e-06 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Pssm-ID: 181564 [Multi-domain] Cd Length: 384 Bit Score: 50.54 E-value: 1.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 7 EKYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPvPTATG-------RADGIQPRSTEILRNLGLKRQIMAFK--PAKv 77
Cdd:PRK08849 2 NKYDIAVVGGGMVGAATALGFAKQGRSVAVIEGGE-PKAFEpsqpmdiRVSAISQTSVDLLESLGAWSSIVAMRvcPYK- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 78 ydvafwdplpggqdihRTGSW--PSCprfiDTRYpfttlvHQGKIErvfLDEIqkaGTTVERPWTIVGFKN-----DGLD 150
Cdd:PRK08849 80 ----------------RLETWehPEC----RTRF------HSDELN---LDQL---GYIVENRLIQLGLWQqfaqyPNLT 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 151 ETYPVevQLKSI----DTNVI-----ETVRTKYLFSGEGARSFIRQQLGIQIQYKDpisYVWGVMDGVVRTNFPDIETKC 221
Cdd:PRK08849 128 LMCPE--KLADLefsaEGNRVtlesgAEIEAKWVIGADGANSQVRQLAGIGITAWD---YRQHCMLINVETEQPQQDITW 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 222 TIHSDAGSIMVIPREDNMVRL--YvqiassDDPDfdpR-KTATAEDVQATARKILQPYWVEWD--RVEWYSVYPIGQGIS 296
Cdd:PRK08849 203 QQFTPSGPRSFLPLCGNQGSLvwY------DSPK---RiKQLSAMNPEQLRSEILRHFPAELGeiKVLQHGSFPLTRRHA 273
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 350632776 297 EKYTlDERVFMGGDACHTHSPKAGQGMNTAFHDalnMAWKLHAVE-SGLAKRSILSTYETERK 358
Cdd:PRK08849 274 QQYV-KNNCVLLGDAAHTINPLAGQGVNLGFKD---VDVLLAETEkQGVLNDASFARYERRRR 332
|
|
| COQ6 |
TIGR01989 |
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ... |
9-358 |
4.52e-06 |
|
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Pssm-ID: 273914 [Multi-domain] Cd Length: 437 Bit Score: 49.37 E-value: 4.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 9 YDIVIVGAGPVGI----------------VLSLCMSRWGYKVKHIDNRPVPTATGRADGIQPRSTEILRNLGLKRQIMAF 72
Cdd:TIGR01989 1 FDVVIVGGGPVGLalaaalgnnpltkdlkVLLLDAVDNPKLKSRNYEKPDGPYSNRVSSITPASISFFKKIGAWDHIQSD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 73 KPAKVYDVAFWDPLPGG--QDIHRTGSWP-SCPRFIDT-RYPFTTLVHQGKIERVFLDEIQKAgttveRPWTIVgfKNDG 148
Cdd:TIGR01989 81 RIQPFGRMQVWDGCSLAliRFDRDNGKEDmACIIENDNiQNSLYNRLQEYNGDNVKILNPARL-----ISVTIP--SKYP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 149 LDETYPVEVQLKSIDTnvietVRTKYLFSGEGARSFIRQQLGIQiqykdpiSYVWgvmdgvvrtNFPDIETKCTIHSD-- 226
Cdd:TIGR01989 154 NDNSNWVHITLSDGQV-----LYTKLLIGADGSNSNVRKAANID-------TTGW---------NYNQHAVVATLKLEea 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 227 ------------AGSIMVIPREDNMVRL-------------------------------YVQIASSDDPDFDPRKTATAE 263
Cdd:TIGR01989 213 tendvawqrflpTGPIALLPLPDNNSTLvwstspeealrllslppedfvdalnaafdlgYSDHPYSYLLDYAMEKLNEDI 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 264 DVQATARKI---LQPYWVEWDRvEWYSVYPIGQGISEKYtLDERVFMGGDACHTHSPKAGQGMNTAFHDALNMAWKL-HA 339
Cdd:TIGR01989 293 GFRTEGSKScfqVPPRVIGVVD-KSRAAFPLGLGHADEY-VTKRVALVGDAAHRVHPLAGQGVNLGFGDVASLVKALaEA 370
|
410 420
....*....|....*....|.
gi 350632776 340 VESGLAKRSI--LSTYETERK 358
Cdd:TIGR01989 371 VSVGADIGSIssLKPYERERY 391
|
|
| PRK09126 |
PRK09126 |
FAD-dependent hydroxylase; |
8-79 |
2.43e-05 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236385 [Multi-domain] Cd Length: 392 Bit Score: 46.86 E-value: 2.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 8 KYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRPV-----PTATGRADGIQPRSTEILRNLGLKRQIMA-----FKPAKV 77
Cdd:PRK09126 3 HSDIVVVGAGPAGLSFARSLAGSGLKVTLIERQPLaaladPAFDGREIALTHASREILQRLGAWDRIPEdeispLRDAKV 82
|
..
gi 350632776 78 YD 79
Cdd:PRK09126 83 LN 84
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
9-326 |
1.08e-03 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 41.54 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 9 YDIVIVGAGPVGIVLSLCMSRWGYKV----KHIDNRPVPTatgrADGIQPRSTEILRNLGlkrqimAFKPAKVYDVAFWd 84
Cdd:TIGR02032 1 YDVVVVGAGPAGASAAYRLADKGLRVllleKKSFPRYKPC----GGALSPRALEELDLPG------ELIVNLVRGARFF- 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 85 pLPGGQDIHrtgswpscprfIDTRYPFTTLVHQGKIERVFLDEIQKAG--TTVERPWTIVGFKNDGLDETYpvevqlksi 162
Cdd:TIGR02032 70 -SPNGDSVE-----------IPIETELAYVIDRDAFDEQLAERAQEAGaeLRLGTRVLDVEIHDDRVVVIV--------- 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 163 DTnVIETVRTKYLFSGEGARSFIRQQLGiQIQYKDPISY---VWGVMDGVvrtnfPDIETKCTIHSD-----AGSIMVIP 234
Cdd:TIGR02032 129 RG-SEGTVTAKIVIGADGSRSIVAKKLG-LKKEPREYGVaarAEVEMPDE-----EVDEDFVEVYIDrgivpGGYGWVFP 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 235 REDNMVRLYVQIASSDDPdFDPRKtATAEDVQatARKilqpywvEWDRVEWYSVY----PIGQGISEKYTldERVFMGGD 310
Cdd:TIGR02032 202 KGDGTANVGVGSRSAEEG-EDPKK-YLKDFLA--RRP-------ELKDAETVEVCgaliPIGRPDEKLVR--GNVLLVGD 268
|
330
....*....|....*.
gi 350632776 311 ACHTHSPKAGQGMNTA 326
Cdd:TIGR02032 269 AAGHVNPLTGEGIYYA 284
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
4-65 |
1.66e-03 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 41.04 E-value: 1.66e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 350632776 4 SQQEKYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDnRPVPTATGRADGIQPRSTEILRNLGL 65
Cdd:PRK07494 3 MEKEHTDIAVIGGGPAGLAAAIALARAGASVALVA-PEPPYADLRTTALLGPSIRFLERLGL 63
|
|
| PLN02463 |
PLN02463 |
lycopene beta cyclase |
3-41 |
5.54e-03 |
|
lycopene beta cyclase
Pssm-ID: 178082 [Multi-domain] Cd Length: 447 Bit Score: 39.70 E-value: 5.54e-03
10 20 30
....*....|....*....|....*....|....*....
gi 350632776 3 PSQQEKYDIVIVGAGPVGIVLSLCMSRWGYKVKHIDNRP 41
Cdd:PLN02463 23 PSKSRVVDLVVVGGGPAGLAVAQQVSEAGLSVCCIDPSP 61
|
|
| PRK06996 |
PRK06996 |
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; |
1-29 |
6.49e-03 |
|
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;
Pssm-ID: 235905 [Multi-domain] Cd Length: 398 Bit Score: 39.29 E-value: 6.49e-03
10 20
....*....|....*....|....*....
gi 350632776 1 MAPSQQEKYDIVIVGAGPVGIVLSLCMSR 29
Cdd:PRK06996 4 AASMAAPDFDIAIVGAGPVGLALAGWLAR 32
|
|
| PRK08013 |
PRK08013 |
oxidoreductase; Provisional |
304-380 |
9.81e-03 |
|
oxidoreductase; Provisional
Pssm-ID: 236139 [Multi-domain] Cd Length: 400 Bit Score: 38.87 E-value: 9.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 350632776 304 RVFMGGDACHTHSPKAGQGMNTAFHDALNMA---WKLHAVESGLAKRSILSTYETERKDIAETLLSFDNKYAALFSKRRP 380
Cdd:PRK08013 283 RLALVGDAAHTIHPLAGQGVNLGFMDAAELIaelRRLHRQGKDIGQHLYLRRYERSRKHSAALMLAGMQGFRDLFAGNNP 362
|
|
| |
