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Conserved domains on  [gi|308258495|gb|EFP02448|]
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hypothetical protein CRE_01052 [Caenorhabditis remanei]

Protein Classification

DUF2650 domain-containing protein( domain architecture ID 10566810)

DUF2650 domain-containing protein similar to Caenorhabditis elegans protein SUP-1, which may be involved in trafficking or stabilization of the vesicular acetylcholine transporter unc-17

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2650 pfam10853
Protein of unknown function (DUF2650); This family of proteins with unknown function appear to ...
 40-74 2.79e-08

Protein of unknown function (DUF2650); This family of proteins with unknown function appear to be restricted to Caenorhabditis elegans.


:

Pssm-ID: 463190  Cd Length: 35  Bit Score: 45.36  E-value: 2.79e-08
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 308258495  40 CGADNIFYRWRCCDYSPYECCIQLETWVVVFLVIF 74
Cdd:pfam10853  1 CPEESIFHYYKCCGDLNKECCFHLQTWVIVLLAVL 35
 
Name Accession Description Interval E-value
DUF2650 pfam10853
Protein of unknown function (DUF2650); This family of proteins with unknown function appear to ...
 40-74 2.79e-08

Protein of unknown function (DUF2650); This family of proteins with unknown function appear to be restricted to Caenorhabditis elegans.


Pssm-ID: 463190  Cd Length: 35  Bit Score: 45.36  E-value: 2.79e-08
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 308258495  40 CGADNIFYRWRCCDYSPYECCIQLETWVVVFLVIF 74
Cdd:pfam10853  1 CPEESIFHYYKCCGDLNKECCFHLQTWVIVLLAVL 35
 
Name Accession Description Interval E-value
DUF2650 pfam10853
Protein of unknown function (DUF2650); This family of proteins with unknown function appear to ...
 40-74 2.79e-08

Protein of unknown function (DUF2650); This family of proteins with unknown function appear to be restricted to Caenorhabditis elegans.


Pssm-ID: 463190  Cd Length: 35  Bit Score: 45.36  E-value: 2.79e-08
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 308258495  40 CGADNIFYRWRCCDYSPYECCIQLETWVVVFLVIF 74
Cdd:pfam10853  1 CPEESIFHYYKCCGDLNKECCFHLQTWVIVLLAVL 35
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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