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Conserved domains on  [gi|212510642|gb|EEB13778|]
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conserved hypothetical protein [Pediculus humanus corporis]

Protein Classification

GCN5L1 domain-containing protein( domain architecture ID 10533699)

GCN5L1 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GCN5L1 pfam06320
GCN5-like protein 1 (GCN5L1); This family consists of several eukaryotic GCN5-like protein 1 ...
 5-117 3.68e-57

GCN5-like protein 1 (GCN5L1); This family consists of several eukaryotic GCN5-like protein 1 (GCN5L1) sequences. The function of this family is unknown.


:

Pssm-ID: 461876  Cd Length: 113  Bit Score: 172.42  E-value: 3.68e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212510642    5 MLKEHQVKQAKLKELQEHKRKEAIGAANNLTQALIDHLNVGVAQAYLNQKKLDGEAKQLYLSAVKFSKQTQQWLSLVESF 84
Cdd:pfam06320   1 LVKEHQAKQAELREEQEKAKKEAIQSANALTEALVDHLNSGVAQAFLNQKKLEAEAKALQANVAKFAKQTTQWLALVENF 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 212510642   85 SNSLKEIGDIENWSKTIENDMKIITTALECAYK 117
Cdd:pfam06320  81 NSALKEIGDVENWAKTIENDMKIITAALEYVYK 113
 
Name Accession Description Interval E-value
GCN5L1 pfam06320
GCN5-like protein 1 (GCN5L1); This family consists of several eukaryotic GCN5-like protein 1 ...
 5-117 3.68e-57

GCN5-like protein 1 (GCN5L1); This family consists of several eukaryotic GCN5-like protein 1 (GCN5L1) sequences. The function of this family is unknown.


Pssm-ID: 461876  Cd Length: 113  Bit Score: 172.42  E-value: 3.68e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212510642    5 MLKEHQVKQAKLKELQEHKRKEAIGAANNLTQALIDHLNVGVAQAYLNQKKLDGEAKQLYLSAVKFSKQTQQWLSLVESF 84
Cdd:pfam06320   1 LVKEHQAKQAELREEQEKAKKEAIQSANALTEALVDHLNSGVAQAFLNQKKLEAEAKALQANVAKFAKQTTQWLALVENF 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 212510642   85 SNSLKEIGDIENWSKTIENDMKIITTALECAYK 117
Cdd:pfam06320  81 NSALKEIGDVENWAKTIENDMKIITAALEYVYK 113
 
Name Accession Description Interval E-value
GCN5L1 pfam06320
GCN5-like protein 1 (GCN5L1); This family consists of several eukaryotic GCN5-like protein 1 ...
 5-117 3.68e-57

GCN5-like protein 1 (GCN5L1); This family consists of several eukaryotic GCN5-like protein 1 (GCN5L1) sequences. The function of this family is unknown.


Pssm-ID: 461876  Cd Length: 113  Bit Score: 172.42  E-value: 3.68e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212510642    5 MLKEHQVKQAKLKELQEHKRKEAIGAANNLTQALIDHLNVGVAQAYLNQKKLDGEAKQLYLSAVKFSKQTQQWLSLVESF 84
Cdd:pfam06320   1 LVKEHQAKQAELREEQEKAKKEAIQSANALTEALVDHLNSGVAQAFLNQKKLEAEAKALQANVAKFAKQTTQWLALVENF 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 212510642   85 SNSLKEIGDIENWSKTIENDMKIITTALECAYK 117
Cdd:pfam06320  81 NSALKEIGDVENWAKTIENDMKIITAALEYVYK 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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