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Conserved domains on  [gi|194134514|gb|EDW56030|]
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GM22809 [Drosophila sechellia]

Protein Classification

MBF2 family protein( domain architecture ID 11239491)

MBF2 family protein similar to Samia cynthia transcriptional coactivator MBF2 that activates transcription via its interaction with TFIIA

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MBF2 pfam15868
Transcription activator MBF2; MBF2 activates transcription via its interaction with TFIIA. In ...
 67-155 3.96e-22

Transcription activator MBF2; MBF2 activates transcription via its interaction with TFIIA. In Bombyx mori, it has been found to form a complex with MBF1 and the DNA-binding regulator FTZ-F1.


:

Pssm-ID: 464913  Cd Length: 90  Bit Score: 84.19  E-value: 3.96e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194134514   67 GERASGDRLIVNHYDDENFPSAKDVEVLMSYPAgASTGVTLTSIEVYVDM-AADDAGGYLTKGGIGQTNVEILLTSNQTR 145
Cdd:pfam15868   2 GERQPGDRLLYRETIVKSPSWLRVVTVTITYPA-SGTGETITYIEVLDQFtNGSGATAYLTSGGVGQNFVTIRLKSQRGR 80

                          90
                  ....*....|
gi 194134514  146 SFVYETFIYG 155
Cdd:pfam15868  81 GFNFTVEIYG 90
 
Name Accession Description Interval E-value
MBF2 pfam15868
Transcription activator MBF2; MBF2 activates transcription via its interaction with TFIIA. In ...
 67-155 3.96e-22

Transcription activator MBF2; MBF2 activates transcription via its interaction with TFIIA. In Bombyx mori, it has been found to form a complex with MBF1 and the DNA-binding regulator FTZ-F1.


Pssm-ID: 464913  Cd Length: 90  Bit Score: 84.19  E-value: 3.96e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194134514   67 GERASGDRLIVNHYDDENFPSAKDVEVLMSYPAgASTGVTLTSIEVYVDM-AADDAGGYLTKGGIGQTNVEILLTSNQTR 145
Cdd:pfam15868   2 GERQPGDRLLYRETIVKSPSWLRVVTVTITYPA-SGTGETITYIEVLDQFtNGSGATAYLTSGGVGQNFVTIRLKSQRGR 80

                          90
                  ....*....|
gi 194134514  146 SFVYETFIYG 155
Cdd:pfam15868  81 GFNFTVEIYG 90
 
Name Accession Description Interval E-value
MBF2 pfam15868
Transcription activator MBF2; MBF2 activates transcription via its interaction with TFIIA. In ...
 67-155 3.96e-22

Transcription activator MBF2; MBF2 activates transcription via its interaction with TFIIA. In Bombyx mori, it has been found to form a complex with MBF1 and the DNA-binding regulator FTZ-F1.


Pssm-ID: 464913  Cd Length: 90  Bit Score: 84.19  E-value: 3.96e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194134514   67 GERASGDRLIVNHYDDENFPSAKDVEVLMSYPAgASTGVTLTSIEVYVDM-AADDAGGYLTKGGIGQTNVEILLTSNQTR 145
Cdd:pfam15868   2 GERQPGDRLLYRETIVKSPSWLRVVTVTITYPA-SGTGETITYIEVLDQFtNGSGATAYLTSGGVGQNFVTIRLKSQRGR 80

                          90
                  ....*....|
gi 194134514  146 SFVYETFIYG 155
Cdd:pfam15868  81 GFNFTVEIYG 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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