NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|149053712|gb|EDM05529|]
View 

rCG34706 [Rattus norvegicus]

Protein Classification

phosphatidylinositol anchor biosynthesis protein PIGW/GWT1( domain architecture ID 5607)

phosphatidylinositol anchor biosynthesis protein PIGW/GWT1 is involved in the addition of the acyl-chain to inositol in an early step of glycosylphosphatidylinositol (GPI) biosynthesis

EC:  2.3.-.-
Gene Ontology:  GO:0016746|GO:0006506

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
GWT1 super family cl02109
GWT1; Glycosylphosphatidylinositol (GPI) is a conserved post-translational modification to ...
7-504 5.62e-51

GWT1; Glycosylphosphatidylinositol (GPI) is a conserved post-translational modification to anchor cell surface proteins to plasma membrane in eukaryotes. GWT1 is involved in GPI anchor biosynthesis; it is required for inositol acylation in yeast.


The actual alignment was detected with superfamily member COG5062:

Pssm-ID: 470470  Cd Length: 429  Bit Score: 179.64  E-value: 5.62e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712   7 KQLKEAFVSNLSgTSVLEVTQGLCFPAFCILCRGLLIIFSqhlcsflhtwttqFFMDFVVLIVPLvITLTVLSSFILLeN 86
Cdd:COG5062    2 KPCKEGFVTNLT-LSEIELFAVTSITHLSIVVYHLMLPKS-------------TLLEFMFCLVPL-YSIIVFLKYSGL-T 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712  87 LTVIVCGAWLLYQIYH--RRTCYAKVPVQKVFASFLKISLESEYNP-AITCYRVINSVFTAIAILAVDFPLFPRRFAKTE 163
Cdd:COG5062   66 YALFLCLLGFLFLFWRrlRKPVNPGNPSSKPKQSTDAPQDDEPYTSmAITRYRFLIIGCTVIAILAVDFPFFPRRLGKSE 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712 164 LYGTGAMDFGVGGFIFGAAMVCPEVRRKytegsrfNHLRKSLYsvwpLVFLGMGRLVIIKSIGYQEHSTEYGVHWNFFFT 243
Cdd:COG5062  146 TWGTSLMDIGVGSFVYNSGIVSTRAKSK-------RKLKNALI----LLFLGFLRYFSVKLLNYQVHVREYGVHWNFFFT 214
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712 244 IIVVKLITSLlliiFPLNKSWIVAISITVLYQLALDFTPLKGIILygtdgRGTRVGLLNANREGIISTLGYVAIYMAGVQ 323
Cdd:COG5062  215 LGLLNLASLF----IRTRANFLLGFFICLTHELLLKFFGLEKFIY-----SAARSSILTSNREGITSLLPYISIFLMGAD 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712 324 TGFYVFKRRAQvrdwiKATCW-VFSVAVGFFISLNIVQVNVEAVSRRMANLAFCLWVVASSLmllsclllsgivlsfakF 402
Cdd:COG5062  286 TGKVVFKKKPT-----RKKAWkIIILYNAFFLCVYLVFNFYSTSSRRLANLPFVMWIMLLHT-----------------F 343
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712 403 LIKGALVpcswkliqsatTNRQSesliveAEKNKPSFCLITAlNRNQLFFFLLSNVATGLINLTVDTLHTGA--FWTLAV 480
Cdd:COG5062  344 HLTVYEL-----------FDRTS------KIYNLVMHRFESK-NLNFLLVFSNANVLTGKVNSSSKTMSSCSshAKCLTY 405
                        490       500
                 ....*....|....*....|....
gi 149053712 481 LSIYMFANCLVIYVLDLQGKTIKF 504
Cdd:COG5062  406 LVAVFSIPCAINSKLAGKLIVSGL 429
 
Name Accession Description Interval E-value
COG5062 COG5062
Uncharacterized membrane protein [Function unknown];
7-504 5.62e-51

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 227394  Cd Length: 429  Bit Score: 179.64  E-value: 5.62e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712   7 KQLKEAFVSNLSgTSVLEVTQGLCFPAFCILCRGLLIIFSqhlcsflhtwttqFFMDFVVLIVPLvITLTVLSSFILLeN 86
Cdd:COG5062    2 KPCKEGFVTNLT-LSEIELFAVTSITHLSIVVYHLMLPKS-------------TLLEFMFCLVPL-YSIIVFLKYSGL-T 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712  87 LTVIVCGAWLLYQIYH--RRTCYAKVPVQKVFASFLKISLESEYNP-AITCYRVINSVFTAIAILAVDFPLFPRRFAKTE 163
Cdd:COG5062   66 YALFLCLLGFLFLFWRrlRKPVNPGNPSSKPKQSTDAPQDDEPYTSmAITRYRFLIIGCTVIAILAVDFPFFPRRLGKSE 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712 164 LYGTGAMDFGVGGFIFGAAMVCPEVRRKytegsrfNHLRKSLYsvwpLVFLGMGRLVIIKSIGYQEHSTEYGVHWNFFFT 243
Cdd:COG5062  146 TWGTSLMDIGVGSFVYNSGIVSTRAKSK-------RKLKNALI----LLFLGFLRYFSVKLLNYQVHVREYGVHWNFFFT 214
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712 244 IIVVKLITSLlliiFPLNKSWIVAISITVLYQLALDFTPLKGIILygtdgRGTRVGLLNANREGIISTLGYVAIYMAGVQ 323
Cdd:COG5062  215 LGLLNLASLF----IRTRANFLLGFFICLTHELLLKFFGLEKFIY-----SAARSSILTSNREGITSLLPYISIFLMGAD 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712 324 TGFYVFKRRAQvrdwiKATCW-VFSVAVGFFISLNIVQVNVEAVSRRMANLAFCLWVVASSLmllsclllsgivlsfakF 402
Cdd:COG5062  286 TGKVVFKKKPT-----RKKAWkIIILYNAFFLCVYLVFNFYSTSSRRLANLPFVMWIMLLHT-----------------F 343
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712 403 LIKGALVpcswkliqsatTNRQSesliveAEKNKPSFCLITAlNRNQLFFFLLSNVATGLINLTVDTLHTGA--FWTLAV 480
Cdd:COG5062  344 HLTVYEL-----------FDRTS------KIYNLVMHRFESK-NLNFLLVFSNANVLTGKVNSSSKTMSSCSshAKCLTY 405
                        490       500
                 ....*....|....*....|....
gi 149053712 481 LSIYMFANCLVIYVLDLQGKTIKF 504
Cdd:COG5062  406 LVAVFSIPCAINSKLAGKLIVSGL 429
GWT1 pfam06423
GWT1; Glycosylphosphatidylinositol (GPI) is a conserved post-translational modification to ...
303-464 6.74e-37

GWT1; Glycosylphosphatidylinositol (GPI) is a conserved post-translational modification to anchor cell surface proteins to plasma membrane in eukaryotes. GWT1 is involved in GPI anchor biosynthesis; it is required for inositol acylation in yeast.


Pssm-ID: 461907  Cd Length: 138  Bit Score: 132.72  E-value: 6.74e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712  303 ANREGIISTLGYVAIYMAGVQTGFYVFKRRAQ--VRDWIKATCWVFSVAVGFFISLNIVQVNVEAVSRRMANLAFCLWVV 380
Cdd:pfam06423   1 ANREGIFSLPGYLAIYLAGVSLGSYVLPRRPTnrVKQWSKLLIKLLILSILFWLLLLVLAFYVEPVSRRLANLPYVLWVV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712  381 ASSLMLLSCLLLSGIVLSfakflikgalvpcswkliqsattnrqSESLIVEAEKNKPSFCLITALNRNQLFFFLLSNVAT 460
Cdd:pfam06423  81 AFNLTFLLLYLLVDLVFF--------------------------ADSAKEKARPSTATPCLLEAINRNGLAVFLLANLLT 134

                  ....
gi 149053712  461 GLIN 464
Cdd:pfam06423 135 GLVN 138
 
Name Accession Description Interval E-value
COG5062 COG5062
Uncharacterized membrane protein [Function unknown];
7-504 5.62e-51

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 227394  Cd Length: 429  Bit Score: 179.64  E-value: 5.62e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712   7 KQLKEAFVSNLSgTSVLEVTQGLCFPAFCILCRGLLIIFSqhlcsflhtwttqFFMDFVVLIVPLvITLTVLSSFILLeN 86
Cdd:COG5062    2 KPCKEGFVTNLT-LSEIELFAVTSITHLSIVVYHLMLPKS-------------TLLEFMFCLVPL-YSIIVFLKYSGL-T 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712  87 LTVIVCGAWLLYQIYH--RRTCYAKVPVQKVFASFLKISLESEYNP-AITCYRVINSVFTAIAILAVDFPLFPRRFAKTE 163
Cdd:COG5062   66 YALFLCLLGFLFLFWRrlRKPVNPGNPSSKPKQSTDAPQDDEPYTSmAITRYRFLIIGCTVIAILAVDFPFFPRRLGKSE 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712 164 LYGTGAMDFGVGGFIFGAAMVCPEVRRKytegsrfNHLRKSLYsvwpLVFLGMGRLVIIKSIGYQEHSTEYGVHWNFFFT 243
Cdd:COG5062  146 TWGTSLMDIGVGSFVYNSGIVSTRAKSK-------RKLKNALI----LLFLGFLRYFSVKLLNYQVHVREYGVHWNFFFT 214
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712 244 IIVVKLITSLlliiFPLNKSWIVAISITVLYQLALDFTPLKGIILygtdgRGTRVGLLNANREGIISTLGYVAIYMAGVQ 323
Cdd:COG5062  215 LGLLNLASLF----IRTRANFLLGFFICLTHELLLKFFGLEKFIY-----SAARSSILTSNREGITSLLPYISIFLMGAD 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712 324 TGFYVFKRRAQvrdwiKATCW-VFSVAVGFFISLNIVQVNVEAVSRRMANLAFCLWVVASSLmllsclllsgivlsfakF 402
Cdd:COG5062  286 TGKVVFKKKPT-----RKKAWkIIILYNAFFLCVYLVFNFYSTSSRRLANLPFVMWIMLLHT-----------------F 343
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712 403 LIKGALVpcswkliqsatTNRQSesliveAEKNKPSFCLITAlNRNQLFFFLLSNVATGLINLTVDTLHTGA--FWTLAV 480
Cdd:COG5062  344 HLTVYEL-----------FDRTS------KIYNLVMHRFESK-NLNFLLVFSNANVLTGKVNSSSKTMSSCSshAKCLTY 405
                        490       500
                 ....*....|....*....|....
gi 149053712 481 LSIYMFANCLVIYVLDLQGKTIKF 504
Cdd:COG5062  406 LVAVFSIPCAINSKLAGKLIVSGL 429
GWT1 pfam06423
GWT1; Glycosylphosphatidylinositol (GPI) is a conserved post-translational modification to ...
303-464 6.74e-37

GWT1; Glycosylphosphatidylinositol (GPI) is a conserved post-translational modification to anchor cell surface proteins to plasma membrane in eukaryotes. GWT1 is involved in GPI anchor biosynthesis; it is required for inositol acylation in yeast.


Pssm-ID: 461907  Cd Length: 138  Bit Score: 132.72  E-value: 6.74e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712  303 ANREGIISTLGYVAIYMAGVQTGFYVFKRRAQ--VRDWIKATCWVFSVAVGFFISLNIVQVNVEAVSRRMANLAFCLWVV 380
Cdd:pfam06423   1 ANREGIFSLPGYLAIYLAGVSLGSYVLPRRPTnrVKQWSKLLIKLLILSILFWLLLLVLAFYVEPVSRRLANLPYVLWVV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149053712  381 ASSLMLLSCLLLSGIVLSfakflikgalvpcswkliqsattnrqSESLIVEAEKNKPSFCLITALNRNQLFFFLLSNVAT 460
Cdd:pfam06423  81 AFNLTFLLLYLLVDLVFF--------------------------ADSAKEKARPSTATPCLLEAINRNGLAVFLLANLLT 134

                  ....
gi 149053712  461 GLIN 464
Cdd:pfam06423 135 GLVN 138
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH