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Conserved domains on  [gi|148701447|gb|EDL33394|]
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mCG17849, isoform CRA_a [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF5564 pfam17719
Family of unknown function (DUF5564); This is a family of unknown function found in chordata.
 1-98 5.90e-37

Family of unknown function (DUF5564); This is a family of unknown function found in chordata.


:

Pssm-ID: 465468  Cd Length: 98  Bit Score: 121.17  E-value: 5.90e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148701447    1 MAPPGGKINRPRTELKKKLFKRRRVLSRDRRRKRQVVGAVIDEGLTTKHHLKKRASSARANITLSGKKRRKLLQQIRLAQ 80
Cdd:pfam17719   1 MAAPGGKINRPRTELKKKLFKRRRVLNREKRKRHQVVGAVVDQGLITIHHLKKRRSSPRANITLSGKKRRKLLKQLRHAQ 80

                          90
                  ....*....|....*...
gi 148701447   81 KEKAAMEVEAPSKSTRTS 98
Cdd:pfam17719  81 KEKASMEVEAPSKPARTS 98
 
Name Accession Description Interval E-value
DUF5564 pfam17719
Family of unknown function (DUF5564); This is a family of unknown function found in chordata.
 1-98 5.90e-37

Family of unknown function (DUF5564); This is a family of unknown function found in chordata.


Pssm-ID: 465468  Cd Length: 98  Bit Score: 121.17  E-value: 5.90e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148701447    1 MAPPGGKINRPRTELKKKLFKRRRVLSRDRRRKRQVVGAVIDEGLTTKHHLKKRASSARANITLSGKKRRKLLQQIRLAQ 80
Cdd:pfam17719   1 MAAPGGKINRPRTELKKKLFKRRRVLNREKRKRHQVVGAVVDQGLITIHHLKKRRSSPRANITLSGKKRRKLLKQLRHAQ 80

                          90
                  ....*....|....*...
gi 148701447   81 KEKAAMEVEAPSKSTRTS 98
Cdd:pfam17719  81 KEKASMEVEAPSKPARTS 98
 
Name Accession Description Interval E-value
DUF5564 pfam17719
Family of unknown function (DUF5564); This is a family of unknown function found in chordata.
 1-98 5.90e-37

Family of unknown function (DUF5564); This is a family of unknown function found in chordata.


Pssm-ID: 465468  Cd Length: 98  Bit Score: 121.17  E-value: 5.90e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148701447    1 MAPPGGKINRPRTELKKKLFKRRRVLSRDRRRKRQVVGAVIDEGLTTKHHLKKRASSARANITLSGKKRRKLLQQIRLAQ 80
Cdd:pfam17719   1 MAAPGGKINRPRTELKKKLFKRRRVLNREKRKRHQVVGAVVDQGLITIHHLKKRRSSPRANITLSGKKRRKLLKQLRHAQ 80

                          90
                  ....*....|....*...
gi 148701447   81 KEKAAMEVEAPSKSTRTS 98
Cdd:pfam17719  81 KEKASMEVEAPSKPARTS 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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