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Conserved domains on  [gi|148671355|gb|EDL03302|]
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alanine-glyoxylate aminotransferase 2, isoform CRA_a [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ArgD super family cl43043
Acetylornithine aminotransferase/4-aminobutyrate aminotransferase [Amino acid transport and ...
 65-151 4.39e-28

Acetylornithine aminotransferase/4-aminobutyrate aminotransferase [Amino acid transport and metabolism]; Acetylornithine aminotransferase/4-aminobutyrate aminotransferase is part of the Pathway/BioSystem: Arginine biosynthesis


The actual alignment was detected with superfamily member COG0160:

Pssm-ID: 439930 [Multi-domain]  Cd Length: 429  Bit Score: 107.07  E-value: 4.39e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  65 VLAIHKQHLSPVDTAYFrkPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSP 144
Cdd:COG0160    6 LLARRERYESRGYSRSY--PVVIVRAEGAYLWDVDGNRYLDFLAGIGVLNVGHNHPRVVEAVKEQLDKLTHTLTDYLTEA 83


                 ....*..
gi 148671355 145 MHEYADK 151
Cdd:COG0160   84 KVELAER 90
 
Name Accession Description Interval E-value
ArgD COG0160
Acetylornithine aminotransferase/4-aminobutyrate aminotransferase [Amino acid transport and ...
 65-151 4.39e-28

Acetylornithine aminotransferase/4-aminobutyrate aminotransferase [Amino acid transport and metabolism]; Acetylornithine aminotransferase/4-aminobutyrate aminotransferase is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 439930 [Multi-domain]  Cd Length: 429  Bit Score: 107.07  E-value: 4.39e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  65 VLAIHKQHLSPVDTAYFrkPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSP 144
Cdd:COG0160    6 LLARRERYESRGYSRSY--PVVIVRAEGAYLWDVDGNRYLDFLAGIGVLNVGHNHPRVVEAVKEQLDKLTHTLTDYLTEA 83


                 ....*..
gi 148671355 145 MHEYADK 151
Cdd:COG0160   84 KVELAER 90
OAT_like cd00610
Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP) ...
 66-151 4.86e-21

Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.


Pssm-ID: 99735 [Multi-domain]  Cd Length: 413  Bit Score: 87.62  E-value: 4.86e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  66 LAIHKQHLSPVDTAYFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHS-P 144
Cdd:cd00610    1 LFERDRKVLWHGYTVRPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNeP 80


                 ....*..
gi 148671355 145 MHEYADK 151
Cdd:cd00610   81 AVELAEL 87
argD TIGR00707
transaminase, acetylornithine/succinylornithine family; This family of proteins, for which ...
 80-151 1.28e-19

transaminase, acetylornithine/succinylornithine family; This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from E. coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (EC 2.6.1.11), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism (See MEDLINE:98361920). Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)


Pssm-ID: 273228 [Multi-domain]  Cd Length: 379  Bit Score: 83.57  E-value: 1.28e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 148671355   80 YFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYADK 151
Cdd:TIGR00707   6 YGRLPVKIVRGKGSYVYDVNGKEYLDFVAGIAVNALGHAHPKLVEALKEQAEKLWHTSNLYYTEPQEELAEK 77
PRK02627 PRK02627
acetylornithine aminotransferase; Provisional
 80-151 1.41e-19

acetylornithine aminotransferase; Provisional


Pssm-ID: 235056 [Multi-domain]  Cd Length: 396  Bit Score: 83.64  E-value: 1.41e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 148671355  80 YFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYADK 151
Cdd:PRK02627  18 YGRLPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEK 89
Aminotran_3 pfam00202
Aminotransferase class-III;
94-151 2.72e-16

Aminotransferase class-III;


Pssm-ID: 395148 [Multi-domain]  Cd Length: 397  Bit Score: 74.29  E-value: 2.72e-16
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 148671355   94 WLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSS-VFFHSPMHEYADK 151
Cdd:pfam00202  20 YLTDVDGNRYLDFYSGIAVTNLGHCHPALVAAVKTQADKLSHVSFgAFTNEPALDLAEK 78
 
Name Accession Description Interval E-value
ArgD COG0160
Acetylornithine aminotransferase/4-aminobutyrate aminotransferase [Amino acid transport and ...
 65-151 4.39e-28

Acetylornithine aminotransferase/4-aminobutyrate aminotransferase [Amino acid transport and metabolism]; Acetylornithine aminotransferase/4-aminobutyrate aminotransferase is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 439930 [Multi-domain]  Cd Length: 429  Bit Score: 107.07  E-value: 4.39e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  65 VLAIHKQHLSPVDTAYFrkPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSP 144
Cdd:COG0160    6 LLARRERYESRGYSRSY--PVVIVRAEGAYLWDVDGNRYLDFLAGIGVLNVGHNHPRVVEAVKEQLDKLTHTLTDYLTEA 83


                 ....*..
gi 148671355 145 MHEYADK 151
Cdd:COG0160   84 KVELAER 90
ArgD COG4992
Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase [Amino acid transport and ...
 65-151 1.76e-23

Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase [Amino acid transport and metabolism]; Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 444016 [Multi-domain]  Cd Length: 396  Bit Score: 94.34  E-value: 1.76e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  65 VLAIHKQHLSPVdtaYFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSP 144
Cdd:COG4992    5 IIELFDQYLMPT---YGRLPVVLVRGEGSYLWDVDGKRYLDFLSGIAVNSLGHAHPRLVEALKEQADKLIHTSNLFYNPP 81


                 ....*..
gi 148671355 145 MHEYADK 151
Cdd:COG4992   82 QGELAEK 88
OAT_like cd00610
Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP) ...
 66-151 4.86e-21

Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.


Pssm-ID: 99735 [Multi-domain]  Cd Length: 413  Bit Score: 87.62  E-value: 4.86e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  66 LAIHKQHLSPVDTAYFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHS-P 144
Cdd:cd00610    1 LFERDRKVLWHGYTVRPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNeP 80


                 ....*..
gi 148671355 145 MHEYADK 151
Cdd:cd00610   81 AVELAEL 87
argD TIGR00707
transaminase, acetylornithine/succinylornithine family; This family of proteins, for which ...
 80-151 1.28e-19

transaminase, acetylornithine/succinylornithine family; This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from E. coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (EC 2.6.1.11), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism (See MEDLINE:98361920). Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)


Pssm-ID: 273228 [Multi-domain]  Cd Length: 379  Bit Score: 83.57  E-value: 1.28e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 148671355   80 YFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYADK 151
Cdd:TIGR00707   6 YGRLPVKIVRGKGSYVYDVNGKEYLDFVAGIAVNALGHAHPKLVEALKEQAEKLWHTSNLYYTEPQEELAEK 77
PRK02627 PRK02627
acetylornithine aminotransferase; Provisional
 80-151 1.41e-19

acetylornithine aminotransferase; Provisional


Pssm-ID: 235056 [Multi-domain]  Cd Length: 396  Bit Score: 83.64  E-value: 1.41e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 148671355  80 YFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYADK 151
Cdd:PRK02627  18 YGRLPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEK 89
argD PRK01278
acetylornithine transaminase protein; Provisional
 71-140 4.89e-19

acetylornithine transaminase protein; Provisional


Pssm-ID: 179270 [Multi-domain]  Cd Length: 389  Bit Score: 82.19  E-value: 4.89e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  71 QHLSPVdtaYFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVF 140
Cdd:PRK01278   4 SPLLPV---YNRADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLY 70
PRK05769 PRK05769
acetyl ornithine aminotransferase family protein;
63-151 3.99e-17

acetyl ornithine aminotransferase family protein;


Pssm-ID: 235599 [Multi-domain]  Cd Length: 441  Bit Score: 76.88  E-value: 3.99e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  63 SRVLAIHKQHLSPVDTAYFRK-PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTS-SVF 140
Cdd:PRK05769  15 PKAREIIERDEKYLAQSTRRWyPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSlTDF 94

                         90
                 ....*....|.
gi 148671355 141 FHSPMHEYADK 151
Cdd:PRK05769  95 YYEPAVELAER 105
argD PRK02936
acetylornithine transaminase;
71-147 7.46e-17

acetylornithine transaminase;


Pssm-ID: 179505 [Multi-domain]  Cd Length: 377  Bit Score: 75.77  E-value: 7.46e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 148671355  71 QHLSPvdtAYFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVfFHSPMHE 147
Cdd:PRK02936   2 SHLFP---TYGRFPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNL-FTNSLQE 74
Aminotran_3 pfam00202
Aminotransferase class-III;
94-151 2.72e-16

Aminotransferase class-III;


Pssm-ID: 395148 [Multi-domain]  Cd Length: 397  Bit Score: 74.29  E-value: 2.72e-16
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 148671355   94 WLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSS-VFFHSPMHEYADK 151
Cdd:pfam00202  20 YLTDVDGNRYLDFYSGIAVTNLGHCHPALVAAVKTQADKLSHVSFgAFTNEPALDLAEK 78
PTZ00125 PTZ00125
ornithine aminotransferase-like protein; Provisional
 80-149 8.65e-15

ornithine aminotransferase-like protein; Provisional


Pssm-ID: 240281 [Multi-domain]  Cd Length: 400  Bit Score: 70.09  E-value: 8.65e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  80 YFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYA 149
Cdd:PTZ00125  10 YHPLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAE 79
PRK08117 PRK08117
aspartate aminotransferase family protein;
90-151 3.21e-14

aspartate aminotransferase family protein;


Pssm-ID: 181234 [Multi-domain]  Cd Length: 433  Bit Score: 68.52  E-value: 3.21e-14
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 148671355  90 GHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSS-VFFHSPMHEYADK 151
Cdd:PRK08117  32 GEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSgVIYYESILKLAEE 94
BioA COG0161
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme transport and metabolism]; ...
 94-151 2.16e-13

Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme transport and metabolism]; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 439931 [Multi-domain]  Cd Length: 446  Bit Score: 66.23  E-value: 2.16e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 148671355  94 WLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFF-HSPMHEYADK 151
Cdd:COG0161   38 YLYDADGRRYLDGMSGLWCVNHGHGRPEIAEAIAEQLDKLAHVMFFGFtHEPAIELAER 96
Orn_aminotrans TIGR01885
ornithine aminotransferase; This model describes the final step in the biosynthesis of ...
 84-151 2.77e-13

ornithine aminotransferase; This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis (OMNI|PG1271), and the other from Staphylococcus aureus (OMNI|SA0170). After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis (SP|P38021).


Pssm-ID: 273853 [Multi-domain]  Cd Length: 401  Bit Score: 65.81  E-value: 2.77e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 148671355   84 PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYADK 151
Cdd:TIGR01885  20 PVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEY 87
PRK06148 PRK06148
hypothetical protein; Provisional
 53-151 1.76e-12

hypothetical protein; Provisional


Pssm-ID: 180426 [Multi-domain]  Cd Length: 1013  Bit Score: 63.89  E-value: 1.76e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355   53 SPEKYQSLAYSR--VLAIHKQHLSPVDTAYFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVtvSVGHCHPKVSAVAKKQI 130
Cdd:PRK06148  574 PDEAVAQSGRDKaeILRERKEHLLPNLSISYSDPIKFVRGWGVWLIDNRGRAYLDCFNNVC--HVGHAHPRVVAAAARQA 651

                          90       100
                  ....*....|....*....|.
gi 148671355  131 DRLwHTSSVFFHSPMHEYADK 151
Cdd:PRK06148  652 ARL-NTNTRYLHDAIVAYAER 671
PRK06149 PRK06149
aminotransferase;
21-151 2.02e-12

aminotransferase;


Pssm-ID: 235716 [Multi-domain]  Cd Length: 972  Bit Score: 63.48  E-value: 2.02e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  21 LQMRPSLSLGASRIAVPK-----LTLHTKHSM---PPCDFSPEKYQSLaysrvLAIHKQHLSPVDTAYFRKPLLLHQGHM 92
Cdd:PRK06149 502 VQLCPVAGLVPPLFARPSqaaawLALCPSPAPllgLPCDAPPPDAAAL-----LARRDASFARVQKHYYADPPQIERGWR 576

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 148671355  93 EWLFDSEGNRYLDFFSGiVTVsVGHCHPKVSAVAKKQIDRLwHTSSVFFHSPMHEYADK 151
Cdd:PRK06149 577 HHLFDMAGRSYLDMVNN-VTV-LGHGHPRLAAAAARQWSLL-NTNSRFHYAAVAEFSER 632
PRK07495 PRK07495
4-aminobutyrate--2-oxoglutarate transaminase;
95-136 2.41e-12

4-aminobutyrate--2-oxoglutarate transaminase;


Pssm-ID: 236032 [Multi-domain]  Cd Length: 425  Bit Score: 63.23  E-value: 2.41e-12
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 148671355  95 LFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHT 136
Cdd:PRK07495  34 IWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHT 75
argD PRK05093
acetylornithine/succinyldiaminopimelate transaminase;
97-151 2.81e-12

acetylornithine/succinyldiaminopimelate transaminase;


Pssm-ID: 179933 [Multi-domain]  Cd Length: 403  Bit Score: 63.02  E-value: 2.81e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 148671355  97 DSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYADK 151
Cdd:PRK05093  36 DQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKK 90
argD PRK04612
acetylornithine transaminase;
80-154 6.76e-12

acetylornithine transaminase;


Pssm-ID: 179868 [Multi-domain]  Cd Length: 408  Bit Score: 61.89  E-value: 6.76e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 148671355  80 YFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSP----MHEYADKSQF 154
Cdd:PRK04612  19 YRPRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPplklAEELVTASRF 97
argD PRK03244
acetylornithine transaminase;
80-151 6.98e-12

acetylornithine transaminase;


Pssm-ID: 235112 [Multi-domain]  Cd Length: 398  Bit Score: 61.85  E-value: 6.98e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 148671355  80 YFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYADK 151
Cdd:PRK03244  22 YGTPPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAER 93
PRK06918 PRK06918
4-aminobutyrate aminotransferase; Reviewed
 95-151 7.39e-12

4-aminobutyrate aminotransferase; Reviewed


Pssm-ID: 235885 [Multi-domain]  Cd Length: 451  Bit Score: 61.75  E-value: 7.39e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 148671355  95 LFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTS-SVFFHSPMHEYADK 151
Cdd:PRK06918  48 VTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGfNVMMYEPYIELAEK 105
rocD PRK00854
ornithine--oxo-acid transaminase; Reviewed
 83-142 1.63e-11

ornithine--oxo-acid transaminase; Reviewed


Pssm-ID: 234848 [Multi-domain]  Cd Length: 401  Bit Score: 60.95  E-value: 1.63e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 148671355  83 KPL--LLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFH 142
Cdd:PRK00854  21 KPLdvVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRN 82
PLN02624 PLN02624
ornithine-delta-aminotransferase
 84-150 2.30e-11

ornithine-delta-aminotransferase


Pssm-ID: 215335 [Multi-domain]  Cd Length: 474  Bit Score: 60.56  E-value: 2.30e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 148671355  84 PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYAD 150
Cdd:PLN02624  58 PVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAE 124
arg_catab_astC TIGR03246
succinylornithine transaminase family; Members of the seed alignment for this protein family ...
 95-154 6.74e-11

succinylornithine transaminase family; Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason. [Energy metabolism, Amino acids and amines]


Pssm-ID: 274490 [Multi-domain]  Cd Length: 397  Bit Score: 58.99  E-value: 6.74e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 148671355   95 LFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPM---------HEYADKSQF 154
Cdd:TIGR03246  29 VWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQAQKLWHIGNGYTNEPVlrlakklvdATFADRVFF 97
PRK06062 PRK06062
hypothetical protein; Provisional
 84-149 2.48e-10

hypothetical protein; Provisional


Pssm-ID: 235687 [Multi-domain]  Cd Length: 451  Bit Score: 57.35  E-value: 2.48e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 148671355  84 PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYA 149
Cdd:PRK06062  36 PMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAA 101
PRK08360 PRK08360
aspartate aminotransferase family protein;
78-151 3.45e-10

aspartate aminotransferase family protein;


Pssm-ID: 181401 [Multi-domain]  Cd Length: 443  Bit Score: 57.09  E-value: 3.45e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 148671355  78 TAYFrkPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVF-FHSPMHEYADK 151
Cdd:PRK08360  20 VTYY--PLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYgFPVEPLLLAEK 92
PRK04260 PRK04260
acetylornithine transaminase;
80-151 4.20e-10

acetylornithine transaminase;


Pssm-ID: 179803 [Multi-domain]  Cd Length: 375  Bit Score: 56.77  E-value: 4.20e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 148671355  80 YFRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHcHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYADK 151
Cdd:PRK04260   8 YKRAAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQK 78
argD PRK03715
acetylornithine transaminase protein; Provisional
 74-150 6.22e-10

acetylornithine transaminase protein; Provisional


Pssm-ID: 179636 [Multi-domain]  Cd Length: 395  Bit Score: 56.23  E-value: 6.22e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  74 SPVDTAYF---RKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYAD 150
Cdd:PRK03715   6 YPIDSLMYitnRPDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAG 85
rocD PRK04073
ornithine--oxo-acid transaminase; Provisional
 84-151 8.02e-10

ornithine--oxo-acid transaminase; Provisional


Pssm-ID: 179736 [Multi-domain]  Cd Length: 396  Bit Score: 55.88  E-value: 8.02e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 148671355  84 PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYADK 151
Cdd:PRK04073  23 PIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEK 90
PLN00144 PLN00144
acetylornithine transaminase
 95-151 8.51e-10

acetylornithine transaminase


Pssm-ID: 177748 [Multi-domain]  Cd Length: 382  Bit Score: 55.86  E-value: 8.51e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 148671355  95 LFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYADK 151
Cdd:PLN00144   9 LYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKR 65
PRK08593 PRK08593
aspartate aminotransferase family protein;
80-151 1.77e-09

aspartate aminotransferase family protein;


Pssm-ID: 181493 [Multi-domain]  Cd Length: 445  Bit Score: 55.09  E-value: 1.77e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 148671355  80 YFrkPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWH-TSSVFFHSPMHEYADK 151
Cdd:PRK08593  23 YY--PLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHyTPAYMYHEPLVRLAKK 93
PRK06777 PRK06777
4-aminobutyrate--2-oxoglutarate transaminase;
95-137 5.14e-09

4-aminobutyrate--2-oxoglutarate transaminase;


Pssm-ID: 180690 [Multi-domain]  Cd Length: 421  Bit Score: 53.66  E-value: 5.14e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 148671355  95 LFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTS 137
Cdd:PRK06777  34 LWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTA 76
PRK07483 PRK07483
aspartate aminotransferase family protein;
94-151 1.46e-08

aspartate aminotransferase family protein;


Pssm-ID: 236027 [Multi-domain]  Cd Length: 443  Bit Score: 52.26  E-value: 1.46e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 148671355  94 WLFDSEGNRYLDfFSGIVTVS-VGHCHPKVSAVAKKQIDRL--WHTSsvFFHS-PMHEYADK 151
Cdd:PRK07483  23 YLIDATGKRYLD-ASGGAAVScLGHSHPRVIAAIHAQIDRLayAHTS--FFTTePAEALADR 81
PRK12381 PRK12381
bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
 95-154 1.69e-08

bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional


Pssm-ID: 183486 [Multi-domain]  Cd Length: 406  Bit Score: 52.03  E-value: 1.69e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 148671355  95 LFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPM---------HEYADKSQF 154
Cdd:PRK12381  33 LWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVlrlakklidATFADRVFF 101
PRK08088 PRK08088
4-aminobutyrate--2-oxoglutarate transaminase;
95-136 1.68e-07

4-aminobutyrate--2-oxoglutarate transaminase;


Pssm-ID: 236149 [Multi-domain]  Cd Length: 425  Bit Score: 49.41  E-value: 1.68e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 148671355  95 LFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHT 136
Cdd:PRK08088  35 VWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHT 76
PRK07030 PRK07030
adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
 94-151 2.36e-07

adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional


Pssm-ID: 180800 [Multi-domain]  Cd Length: 466  Bit Score: 48.97  E-value: 2.36e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 148671355  94 WLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTS-SVFFHSPMHEYADK 151
Cdd:PRK07030  40 WLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVIlAGFSHEPVIELSER 98
PRK06931 PRK06931
diaminobutyrate--2-oxoglutarate transaminase;
79-131 4.47e-07

diaminobutyrate--2-oxoglutarate transaminase;


Pssm-ID: 235889 [Multi-domain]  Cd Length: 459  Bit Score: 48.21  E-value: 4.47e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 148671355  79 AYFRK-PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQID 131
Cdd:PRK06931  35 SYPRKlPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLT 88
PRK06541 PRK06541
aspartate aminotransferase family protein;
94-151 5.45e-07

aspartate aminotransferase family protein;


Pssm-ID: 235823 [Multi-domain]  Cd Length: 460  Bit Score: 47.68  E-value: 5.45e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 148671355  94 WLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLwhtssVFF------HSPMHEYADK 151
Cdd:PRK06541  45 YIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTL-----AFFplwsyaHPPAIELAER 103
PRK06058 PRK06058
4-aminobutyrate--2-oxoglutarate transaminase;
97-150 6.38e-07

4-aminobutyrate--2-oxoglutarate transaminase;


Pssm-ID: 235685 [Multi-domain]  Cd Length: 443  Bit Score: 47.71  E-value: 6.38e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 148671355  97 DSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSsvFFHSPMHEYAD 150
Cdd:PRK06058  52 DVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTC--FMVTPYEGYVA 103
argD PRK04013
acetylornithine/acetyl-lysine aminotransferase; Provisional
 81-155 8.90e-07

acetylornithine/acetyl-lysine aminotransferase; Provisional


Pssm-ID: 101376 [Multi-domain]  Cd Length: 364  Bit Score: 47.22  E-value: 8.90e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 148671355  81 FRKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYADK-SQFV 155
Cdd:PRK04013   4 YRKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEElSKWV 79
PRK09792 PRK09792
4-aminobutyrate transaminase; Provisional
 95-137 1.13e-06

4-aminobutyrate transaminase; Provisional


Pssm-ID: 182078 [Multi-domain]  Cd Length: 421  Bit Score: 46.95  E-value: 1.13e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 148671355  95 LFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTS 137
Cdd:PRK09792  34 LKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTA 76
PRK05964 PRK05964
adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
 94-149 1.58e-06

adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional


Pssm-ID: 235656 [Multi-domain]  Cd Length: 423  Bit Score: 46.35  E-value: 1.58e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 148671355  94 WLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHtssVFFHSPMHEYA 149
Cdd:PRK05964  35 YLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDH---VIFAGFTHEPA 87
PRK06105 PRK06105
aminotransferase; Provisional
 84-151 3.69e-06

aminotransferase; Provisional


Pssm-ID: 180401 [Multi-domain]  Cd Length: 460  Bit Score: 45.37  E-value: 3.69e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  84 PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRL--WHTSSVFFHSPMHEYADK 151
Cdd:PRK06105  31 PLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLpfYHTFSHKSHGPVIDLAEK 100
PRK05639 PRK05639
acetyl ornithine aminotransferase family protein;
84-143 4.65e-06

acetyl ornithine aminotransferase family protein;


Pssm-ID: 168145 [Multi-domain]  Cd Length: 457  Bit Score: 44.93  E-value: 4.65e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  84 PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHS 143
Cdd:PRK05639  36 PLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHS 95
PRK06917 PRK06917
aspartate aminotransferase family protein;
80-132 6.17e-06

aspartate aminotransferase family protein;


Pssm-ID: 235884 [Multi-domain]  Cd Length: 447  Bit Score: 44.72  E-value: 6.17e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 148671355  80 YFRKPLL------LHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDR 132
Cdd:PRK06917   4 YLIKPLLgqpypvISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEE 62
PRK12403 PRK12403
aspartate aminotransferase family protein;
84-143 1.44e-05

aspartate aminotransferase family protein;


Pssm-ID: 171472 [Multi-domain]  Cd Length: 460  Bit Score: 43.72  E-value: 1.44e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  84 PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTsSVFFHS 143
Cdd:PRK12403  37 PRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYY-NMFFHT 95
PRK07481 PRK07481
hypothetical protein; Provisional
 82-151 1.66e-05

hypothetical protein; Provisional


Pssm-ID: 168967 [Multi-domain]  Cd Length: 449  Bit Score: 43.51  E-value: 1.66e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 148671355  82 RKPLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLWHTSSV--FFHSPMHEYADK 151
Cdd:PRK07481  23 RPPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFdgTTHPRAIELSYE 94
PRK09264 PRK09264
diaminobutyrate--2-oxoglutarate transaminase;
66-122 2.56e-05

diaminobutyrate--2-oxoglutarate transaminase;


Pssm-ID: 236437 [Multi-domain]  Cd Length: 425  Bit Score: 42.85  E-value: 2.56e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 148671355  66 LAIHKQHLSPVdTAYFRK-PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKV 122
Cdd:PRK09264   4 MDIFERLESEV-RSYCRSfPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVL 60
PRK07480 PRK07480
putative aminotransferase; Validated
 94-151 2.72e-05

putative aminotransferase; Validated


Pssm-ID: 180994 [Multi-domain]  Cd Length: 456  Bit Score: 42.96  E-value: 2.72e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 148671355  94 WLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRL--WHTssvFF---HSPMHEYADK 151
Cdd:PRK07480  43 YLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELpyYNT---FFkttHPPAIELAAK 102
PRK06209 PRK06209
glutamate-1-semialdehyde 2,1-aminomutase; Provisional
 84-132 3.56e-05

glutamate-1-semialdehyde 2,1-aminomutase; Provisional


Pssm-ID: 180471 [Multi-domain]  Cd Length: 431  Bit Score: 42.34  E-value: 3.56e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 148671355  84 PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDR 132
Cdd:PRK06209  31 PGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQD 79
PRK07678 PRK07678
aminotransferase; Validated
 84-133 4.00e-05

aminotransferase; Validated


Pssm-ID: 181078 [Multi-domain]  Cd Length: 451  Bit Score: 42.31  E-value: 4.00e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 148671355  84 PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRL 133
Cdd:PRK07678  30 TMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTL 79
PRK11522 PRK11522
putrescine--2-oxoglutarate aminotransferase; Provisional
 52-132 8.64e-05

putrescine--2-oxoglutarate aminotransferase; Provisional


Pssm-ID: 183175 [Multi-domain]  Cd Length: 459  Bit Score: 41.27  E-value: 8.64e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  52 FSPEKYQSLAySRVLAIHKQHLSPVDTAYfRKPLLLHQ--GHMEW-------LFDSEGNRYLDFFSGIVTVSVGHCHPKV 122
Cdd:PRK11522  26 LDHEEMKALN-REVIEYFKEHVNPGFLEY-RKSVTAGGdyGAVEWqagglntLVDTQGQEFIDCLGGFGIFNVGHRNPVV 103

                         90
                 ....*....|
gi 148671355 123 SAVAKKQIDR 132
Cdd:PRK11522 104 VSAVQNQLAK 113
PLN02760 PLN02760
4-aminobutyrate:pyruvate transaminase
 84-143 2.03e-04

4-aminobutyrate:pyruvate transaminase


Pssm-ID: 215405 [Multi-domain]  Cd Length: 504  Bit Score: 40.18  E-value: 2.03e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 148671355  84 PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRLwhtssVFFHS 143
Cdd:PLN02760  72 PLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKL-----PFYHS 126
PRK00062 PRK00062
glutamate-1-semialdehyde 2,1-aminomutase;
94-132 5.47e-04

glutamate-1-semialdehyde 2,1-aminomutase;


Pssm-ID: 234607 [Multi-domain]  Cd Length: 426  Bit Score: 38.89  E-value: 5.47e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 148671355  94 WLFDSEGNRYLDFFSG----IVtvsvGHCHPKVSAVAKKQIDR 132
Cdd:PRK00062  43 YLYDVDGNEYIDYVGSwgpmIL----GHAHPEVVEAVIEAAEK 81
PRK13360 PRK13360
omega amino acid--pyruvate transaminase; Provisional
 81-133 5.99e-04

omega amino acid--pyruvate transaminase; Provisional


Pssm-ID: 183999 [Multi-domain]  Cd Length: 442  Bit Score: 38.95  E-value: 5.99e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 148671355  81 FRK-PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQIDRL 133
Cdd:PRK13360  25 FKKaPRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGEL 78
GABAtrns_euk TIGR00699
4-aminobutyrate aminotransferase, eukaryotic type; This enzyme is a class III ...
 94-127 6.09e-03

4-aminobutyrate aminotransferase, eukaryotic type; This enzyme is a class III pyridoxal-phosphate-dependent aminotransferase. This model describes known eukaryotic examples of the enzyme. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so separate models are built for prokaryotic and eukaryotic sets. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase. [Central intermediary metabolism, Other]


Pssm-ID: 129782 [Multi-domain]  Cd Length: 464  Bit Score: 35.96  E-value: 6.09e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 148671355   94 WLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAK 127
Cdd:TIGR00699  51 YLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQ 84
PRK12389 PRK12389
glutamate-1-semialdehyde aminotransferase; Provisional
 84-129 7.75e-03

glutamate-1-semialdehyde aminotransferase; Provisional


Pssm-ID: 183493 [Multi-domain]  Cd Length: 428  Bit Score: 35.76  E-value: 7.75e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 148671355  84 PLLLHQGHMEWLFDSEGNRYLDFFSGIVTVSVGHCHPKVSAVAKKQ 129
Cdd:PRK12389  36 PVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEA 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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