|
Name |
Accession |
Description |
Interval |
E-value |
| CUB |
cd00041 |
CUB domain; extracellular domain; present in proteins mostly known to be involved in ... |
416-484 |
2.24e-20 |
|
CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
:
Pssm-ID: 238001 [Multi-domain] Cd Length: 113 Bit Score: 86.31 E-value: 2.24e-20
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 119571558 416 CGGVIRNATTGRIVSPGFPGNYSNNLTCHWLLEAPEGQRLHLHFEKVSLAEDD----DRLIIRNGDNVEAPPV 484
Cdd:cd00041 1 CGGTLTASTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSPncsyDYLEIYDGPSTSSPLL 73
|
|
| CCP |
cd00033 |
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ... |
357-413 |
4.09e-07 |
|
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.
:
Pssm-ID: 153056 [Multi-domain] Cd Length: 57 Bit Score: 47.07 E-value: 4.09e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 119571558 357 CHFPRRPAYGDVTV--TSLHPGGSARFHCATGYQLKGARHLTCLNATQpfWDSKEPVCI 413
Cdd:cd00033 1 CPPPPVPENGTVTGskGSYSYGSTVTYSCNEGYTLVGSSTITCTENGG--WSPPPPTCE 57
|
|
| CUB super family |
cl00049 |
CUB domain; extracellular domain; present in proteins mostly known to be involved in ... |
244-352 |
5.37e-06 |
|
CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
The actual alignment was detected with superfamily member cd00041:
Pssm-ID: 412131 [Multi-domain] Cd Length: 113 Bit Score: 45.48 E-value: 5.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 244 CSWNFSGP-EGSLDSPtDLSSPTDVGLDCFFYISVYPGYGVEIKVQNISLREGET-----VTVEGLGGPDPLPLANQSFL 317
Cdd:cd00041 1 CGGTLTAStSGTISSP-NYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSPNcsydyLEIYDGPSTSSPLLGRFCGS 79
|
90 100 110
....*....|....*....|....*....|....*
gi 119571558 318 LRGQVIRSPTHQAALRFQSLPPPAGPGtFHFHYQA 352
Cdd:cd00041 80 TLPPPIISSGNSLTVRFRSDSSVTGRG-FKATYSA 113
|
|
| PHA03379 super family |
cl33730 |
EBNA-3A; Provisional |
31-188 |
9.83e-05 |
|
EBNA-3A; Provisional
The actual alignment was detected with superfamily member PHA03379:
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 45.05 E-value: 9.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 31 QAPGIEETDGELTAAPTPEQPErgVHFVTTAPTLKLLNHHPLLEEFLQEG----LEKGDEElrPALPFQPDPpapfTPSP 106
Cdd:PHA03379 426 EVPQSLETATSHGSAQVPEPPP--VHDLEPGPLHDQHSMAPCPVAQLPPGplqdLEPGDQL--PGVVQDGRP----ACAP 497
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 107 LPRLANQDSRPVFTSPT--PAMAAVPTQPQSKEGPWSPESESPMLRITAPLPPGPSMAvptlGPGEIASTTPPSRAWTPT 184
Cdd:PHA03379 498 VPAPAGPIVRPWEASLSqvPGVAFAPVMPQPMPVEPVPVPTVALERPVCPAPPLIAMQ----GPGETSGIVRVRERWRPA 573
|
....
gi 119571558 185 QEGP 188
Cdd:PHA03379 574 PWTP 577
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CUB |
cd00041 |
CUB domain; extracellular domain; present in proteins mostly known to be involved in ... |
416-484 |
2.24e-20 |
|
CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
Pssm-ID: 238001 [Multi-domain] Cd Length: 113 Bit Score: 86.31 E-value: 2.24e-20
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 119571558 416 CGGVIRNATTGRIVSPGFPGNYSNNLTCHWLLEAPEGQRLHLHFEKVSLAEDD----DRLIIRNGDNVEAPPV 484
Cdd:cd00041 1 CGGTLTASTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSPncsyDYLEIYDGPSTSSPLL 73
|
|
| CUB |
smart00042 |
Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found ... |
426-482 |
2.12e-14 |
|
Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain.
Pssm-ID: 214483 [Multi-domain] Cd Length: 102 Bit Score: 68.96 E-value: 2.12e-14
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119571558 426 GRIVSPGFPGNYSNNLTCHWLLEAPEGQRLHLHFEKVSLAEDD----DRLIIRNGDNVEAP 482
Cdd:smart00042 1 GTITSPNYPQSYPNNLDCVWTIRAPPGYRIELQFTDFDLESSDnceyDYVEIYDGPSASSP 61
|
|
| CUB |
pfam00431 |
CUB domain; |
416-488 |
7.27e-12 |
|
CUB domain;
Pssm-ID: 395345 [Multi-domain] Cd Length: 110 Bit Score: 61.93 E-value: 7.27e-12
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 119571558 416 CGGVIRNATtGRIVSPGFPGNYSNNLTCHWLLEAPEGQRLHLHFEKVSLAEDD----DRLIIRNGDNvEAPPVYDSY 488
Cdd:pfam00431 1 CGGVLTDSS-GSISSPNYPNPYPPNKDCVWLIRAPPGFRVKLTFQDFELEDHDecgyDYVEIRDGPS-ASSPLLGRF 75
|
|
| CCP |
cd00033 |
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ... |
357-413 |
4.09e-07 |
|
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.
Pssm-ID: 153056 [Multi-domain] Cd Length: 57 Bit Score: 47.07 E-value: 4.09e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 119571558 357 CHFPRRPAYGDVTV--TSLHPGGSARFHCATGYQLKGARHLTCLNATQpfWDSKEPVCI 413
Cdd:cd00033 1 CPPPPVPENGTVTGskGSYSYGSTVTYSCNEGYTLVGSSTITCTENGG--WSPPPPTCE 57
|
|
| CCP |
smart00032 |
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ... |
357-412 |
4.98e-07 |
|
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.
Pssm-ID: 214478 [Multi-domain] Cd Length: 56 Bit Score: 46.75 E-value: 4.98e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 119571558 357 CHFPRRPAYGDVTVTS--LHPGGSARFHCATGYQLKGARHLTCLNATQpfWDSKEPVC 412
Cdd:smart00032 1 CPPPPDIENGTVTSSSgtYSYGDTVTYSCDPGYTLIGSSTITCLENGT--WSPPPPTC 56
|
|
| CUB |
cd00041 |
CUB domain; extracellular domain; present in proteins mostly known to be involved in ... |
244-352 |
5.37e-06 |
|
CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
Pssm-ID: 238001 [Multi-domain] Cd Length: 113 Bit Score: 45.48 E-value: 5.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 244 CSWNFSGP-EGSLDSPtDLSSPTDVGLDCFFYISVYPGYGVEIKVQNISLREGET-----VTVEGLGGPDPLPLANQSFL 317
Cdd:cd00041 1 CGGTLTAStSGTISSP-NYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSPNcsydyLEIYDGPSTSSPLLGRFCGS 79
|
90 100 110
....*....|....*....|....*....|....*
gi 119571558 318 LRGQVIRSPTHQAALRFQSLPPPAGPGtFHFHYQA 352
Cdd:cd00041 80 TLPPPIISSGNSLTVRFRSDSSVTGRG-FKATYSA 113
|
|
| Sushi |
pfam00084 |
Sushi repeat (SCR repeat); |
357-412 |
2.76e-05 |
|
Sushi repeat (SCR repeat);
Pssm-ID: 459664 [Multi-domain] Cd Length: 56 Bit Score: 41.72 E-value: 2.76e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 119571558 357 CHFPRRPAYGDVTVT--SLHPGGSARFHCATGYQLKGARHLTCLnaTQPFWDSKEPVC 412
Cdd:pfam00084 1 CPPPPDIPNGKVSATknEYNYGASVSYECDPGYRLVGSPTITCQ--EDGTWSPPFPEC 56
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
31-188 |
9.83e-05 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 45.05 E-value: 9.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 31 QAPGIEETDGELTAAPTPEQPErgVHFVTTAPTLKLLNHHPLLEEFLQEG----LEKGDEElrPALPFQPDPpapfTPSP 106
Cdd:PHA03379 426 EVPQSLETATSHGSAQVPEPPP--VHDLEPGPLHDQHSMAPCPVAQLPPGplqdLEPGDQL--PGVVQDGRP----ACAP 497
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 107 LPRLANQDSRPVFTSPT--PAMAAVPTQPQSKEGPWSPESESPMLRITAPLPPGPSMAvptlGPGEIASTTPPSRAWTPT 184
Cdd:PHA03379 498 VPAPAGPIVRPWEASLSqvPGVAFAPVMPQPMPVEPVPVPTVALERPVCPAPPLIAMQ----GPGETSGIVRVRERWRPA 573
|
....
gi 119571558 185 QEGP 188
Cdd:PHA03379 574 PWTP 577
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
100-184 |
1.10e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 41.83 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 100 APFTPSPLPRLANQDSR---------------PVFTSPTPAM------AAVPT----QPQSKEGPWSPESESPMLRITAP 154
Cdd:pfam05109 486 SPVTPSPSPRDNGTESKapdmtsptsavttptPNATSPTPAVttptpnATSPTlgktSPTSAVTTPTPNATSPTPAVTTP 565
|
90 100 110
....*....|....*....|....*....|..
gi 119571558 155 LppgPSMAVPTLGPGEIAS--TTPPSRAWTPT 184
Cdd:pfam05109 566 T---PNATIPTLGKTSPTSavTTPTPNATSPT 594
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CUB |
cd00041 |
CUB domain; extracellular domain; present in proteins mostly known to be involved in ... |
416-484 |
2.24e-20 |
|
CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
Pssm-ID: 238001 [Multi-domain] Cd Length: 113 Bit Score: 86.31 E-value: 2.24e-20
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 119571558 416 CGGVIRNATTGRIVSPGFPGNYSNNLTCHWLLEAPEGQRLHLHFEKVSLAEDD----DRLIIRNGDNVEAPPV 484
Cdd:cd00041 1 CGGTLTASTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSPncsyDYLEIYDGPSTSSPLL 73
|
|
| CUB |
smart00042 |
Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found ... |
426-482 |
2.12e-14 |
|
Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein; This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain.
Pssm-ID: 214483 [Multi-domain] Cd Length: 102 Bit Score: 68.96 E-value: 2.12e-14
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119571558 426 GRIVSPGFPGNYSNNLTCHWLLEAPEGQRLHLHFEKVSLAEDD----DRLIIRNGDNVEAP 482
Cdd:smart00042 1 GTITSPNYPQSYPNNLDCVWTIRAPPGYRIELQFTDFDLESSDnceyDYVEIYDGPSASSP 61
|
|
| CUB |
pfam00431 |
CUB domain; |
416-488 |
7.27e-12 |
|
CUB domain;
Pssm-ID: 395345 [Multi-domain] Cd Length: 110 Bit Score: 61.93 E-value: 7.27e-12
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 119571558 416 CGGVIRNATtGRIVSPGFPGNYSNNLTCHWLLEAPEGQRLHLHFEKVSLAEDD----DRLIIRNGDNvEAPPVYDSY 488
Cdd:pfam00431 1 CGGVLTDSS-GSISSPNYPNPYPPNKDCVWLIRAPPGFRVKLTFQDFELEDHDecgyDYVEIRDGPS-ASSPLLGRF 75
|
|
| CCP |
cd00033 |
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ... |
357-413 |
4.09e-07 |
|
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.
Pssm-ID: 153056 [Multi-domain] Cd Length: 57 Bit Score: 47.07 E-value: 4.09e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 119571558 357 CHFPRRPAYGDVTV--TSLHPGGSARFHCATGYQLKGARHLTCLNATQpfWDSKEPVCI 413
Cdd:cd00033 1 CPPPPVPENGTVTGskGSYSYGSTVTYSCNEGYTLVGSSTITCTENGG--WSPPPPTCE 57
|
|
| CCP |
smart00032 |
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ... |
357-412 |
4.98e-07 |
|
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.
Pssm-ID: 214478 [Multi-domain] Cd Length: 56 Bit Score: 46.75 E-value: 4.98e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 119571558 357 CHFPRRPAYGDVTVTS--LHPGGSARFHCATGYQLKGARHLTCLNATQpfWDSKEPVC 412
Cdd:smart00032 1 CPPPPDIENGTVTSSSgtYSYGDTVTYSCDPGYTLIGSSTITCLENGT--WSPPPPTC 56
|
|
| CUB |
cd00041 |
CUB domain; extracellular domain; present in proteins mostly known to be involved in ... |
244-352 |
5.37e-06 |
|
CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
Pssm-ID: 238001 [Multi-domain] Cd Length: 113 Bit Score: 45.48 E-value: 5.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 244 CSWNFSGP-EGSLDSPtDLSSPTDVGLDCFFYISVYPGYGVEIKVQNISLREGET-----VTVEGLGGPDPLPLANQSFL 317
Cdd:cd00041 1 CGGTLTAStSGTISSP-NYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSPNcsydyLEIYDGPSTSSPLLGRFCGS 79
|
90 100 110
....*....|....*....|....*....|....*
gi 119571558 318 LRGQVIRSPTHQAALRFQSLPPPAGPGtFHFHYQA 352
Cdd:cd00041 80 TLPPPIISSGNSLTVRFRSDSSVTGRG-FKATYSA 113
|
|
| Sushi |
pfam00084 |
Sushi repeat (SCR repeat); |
357-412 |
2.76e-05 |
|
Sushi repeat (SCR repeat);
Pssm-ID: 459664 [Multi-domain] Cd Length: 56 Bit Score: 41.72 E-value: 2.76e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 119571558 357 CHFPRRPAYGDVTVT--SLHPGGSARFHCATGYQLKGARHLTCLnaTQPFWDSKEPVC 412
Cdd:pfam00084 1 CPPPPDIPNGKVSATknEYNYGASVSYECDPGYRLVGSPTITCQ--EDGTWSPPFPEC 56
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
31-188 |
9.83e-05 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 45.05 E-value: 9.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 31 QAPGIEETDGELTAAPTPEQPErgVHFVTTAPTLKLLNHHPLLEEFLQEG----LEKGDEElrPALPFQPDPpapfTPSP 106
Cdd:PHA03379 426 EVPQSLETATSHGSAQVPEPPP--VHDLEPGPLHDQHSMAPCPVAQLPPGplqdLEPGDQL--PGVVQDGRP----ACAP 497
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 107 LPRLANQDSRPVFTSPT--PAMAAVPTQPQSKEGPWSPESESPMLRITAPLPPGPSMAvptlGPGEIASTTPPSRAWTPT 184
Cdd:PHA03379 498 VPAPAGPIVRPWEASLSqvPGVAFAPVMPQPMPVEPVPVPTVALERPVCPAPPLIAMQ----GPGETSGIVRVRERWRPA 573
|
....
gi 119571558 185 QEGP 188
Cdd:PHA03379 574 PWTP 577
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
89-222 |
1.04e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.87 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 89 RPALPFQPDPPAPFTPSPLPRLANQDSRPVFTSPTPAMAAVPTQPQSKEGPWSPESESPMLRITAPLPPGPSMAVPTLGP 168
Cdd:PRK12323 393 AAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPV 472
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 119571558 169 GEIASTTPPSRA-----------WTPTQEGPGDMGRPWVAEVVSQGAGIGIQGTITSSTASGDDE 222
Cdd:PRK12323 473 AAAAAAAPARAApaaapapadddPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDA 537
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
90-188 |
2.41e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 2.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 90 PALPFQPDPPAPFTPSPLPRLANQDSRPVFTS--PTPAMAAVPTQPQSKEGPWSPESESPMLRITAPLPPGPS---MAVP 164
Cdd:PHA03247 2733 PALPAAPAPPAVPAGPATPGGPARPARPPTTAgpPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPAdppAAVL 2812
|
90 100
....*....|....*....|....
gi 119571558 165 TLGPGEIASTTPPSRAWTPTQEGP 188
Cdd:PHA03247 2813 APAAALPPAASPAGPLPPPTSAQP 2836
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
24-179 |
4.09e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 43.24 E-value: 4.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 24 APTVGKGQAPGIEETDGELTAAPTPEQPERGVHFVTTAPTLKLLNHHPLLEEFLQEGLEKGDEELRPALPFQPDPPAPFT 103
Cdd:PHA03307 54 TVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPD 133
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 119571558 104 PSPLPRLANQDSRPVFTSPTPAMAAVPTQPQSKEGPWSPESESPMLRITAPLPPGPSMAVPTLGPGEIASTTPPSR 179
Cdd:PHA03307 134 LSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRR 209
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
25-194 |
7.83e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 7.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 25 PTVGKGQAPGIEETDGELTAAPTPEQPErgvhfvTTAPTLKLLNHHPLLEEflqegLEKGDEELRPALPFQPDPPAPFTP 104
Cdd:PHA03247 2593 PQSARPRAPVDDRGDPRGPAPPSPLPPD------THAPDPPPPSPSPAANE-----PDPHPPPTVPPPERPRDDPAPGRV 2661
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 105 SPlPRLANQDSRPVFTSPTP----------AMAAVPTQPQSKEGPWSPESESPMLRITAPLPPGPSMAVPTLGPGEIAST 174
Cdd:PHA03247 2662 SR-PRRARRLGRAAQASSPPqrprrraarpTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPA 2740
|
170 180
....*....|....*....|
gi 119571558 175 TPPSRAWTPTQEGPGDMGRP 194
Cdd:PHA03247 2741 PPAVPAGPATPGGPARPARP 2760
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
100-184 |
1.10e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 41.83 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 100 APFTPSPLPRLANQDSR---------------PVFTSPTPAM------AAVPT----QPQSKEGPWSPESESPMLRITAP 154
Cdd:pfam05109 486 SPVTPSPSPRDNGTESKapdmtsptsavttptPNATSPTPAVttptpnATSPTlgktSPTSAVTTPTPNATSPTPAVTTP 565
|
90 100 110
....*....|....*....|....*....|..
gi 119571558 155 LppgPSMAVPTLGPGEIAS--TTPPSRAWTPT 184
Cdd:pfam05109 566 T---PNATIPTLGKTSPTSavTTPTPNATSPT 594
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
90-199 |
1.10e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 90 PALPFQPDPPAPFTPSPLPRLANQDSRPVFTSpTPAMAAVPTQPQSKEGPWSPESESPMLRITAPLPPGPSMAVPTLGPG 169
Cdd:PHA03247 2553 PPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTS-RARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSP 2631
|
90 100 110
....*....|....*....|....*....|
gi 119571558 170 EIASTTPPSRAWTPTQEGPGDMGRPWVAEV 199
Cdd:PHA03247 2632 SPAANEPDPHPPPTVPPPERPRDDPAPGRV 2661
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
88-187 |
5.28e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 39.41 E-value: 5.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 88 LRPALPFQPDPPAPFTPSPLprlanQDSRPVFTSPTPAMAAVPTQPQSKEGPWSPESESPmlRITAPLPPGPSMAVPTLG 167
Cdd:PRK14950 360 LVPVPAPQPAKPTAAAPSPV-----RPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPP--RPVAPPVPHTPESAPKLT 432
|
90 100
....*....|....*....|.
gi 119571558 168 PGEI-ASTTPPSRAWTPTQEG 187
Cdd:PRK14950 433 RAAIpVDEKPKYTPPAPPKEE 453
|
|
| MCPVI |
pfam02993 |
Minor capsid protein VI; This minor capsid protein may act as a link between the external ... |
71-147 |
6.56e-03 |
|
Minor capsid protein VI; This minor capsid protein may act as a link between the external capsid and the internal DNA-protein core. The C-terminal 11 residues may function as a protease cofactor leading to enzyme activation.
Pssm-ID: 367287 Cd Length: 225 Bit Score: 38.06 E-value: 6.56e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 119571558 71 PLLEEFLQEGLekgdeelRPALPFQPDPPAPFTPS--PLPRLANQDSRPVFTSPTPAMAAVPTQPQSKEGPWSPESESP 147
Cdd:pfam02993 128 PSYEEAVKQGE-------PTTRPIAPMATGVLTPVtlDLPPPVDEVQPPVLSSPSAVVVTRPSRASLRRAASGPRRKRP 199
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
89-186 |
7.61e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 38.94 E-value: 7.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 89 RPALPFQPDPPAPFTPSPLPRLANQDSRPVFTSPTPAMAAVPTqPQSKEGPWSPESESPmlritAPLPPGPSMAVPTLGP 168
Cdd:PHA03269 67 KPDLAQAPTPAASEKFDPAPAPHQAASRAPDPAVAPQLAAAPK-PDAAEAFTSAAQAHE-----APADAGTSAASKKPDP 140
|
90
....*....|....*...
gi 119571558 169 GEIASTTPPSRAWTPTQE 186
Cdd:PHA03269 141 AAHTQHSPPPFAYTRSME 158
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
79-212 |
8.99e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 38.81 E-value: 8.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119571558 79 EGLEKGDEELRPALPFQPDPPAPFTPSPLPRLANQDSRPVFTSPTPAMAAVPTQPQSKEGPWSPESESPMLRITAPLPPG 158
Cdd:PRK07764 379 ERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPP 458
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 119571558 159 PSMAVPTLGPGEIASTTPPSRAWTPTQEGPGDMGRPWVAEVVSQGAGIGIQGTI 212
Cdd:PRK07764 459 AAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATL 512
|
|
| |
