|
Name |
Accession |
Description |
Interval |
E-value |
| PstA |
COG0581 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
203-449 |
1.16e-92 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440346 [Multi-domain] Cd Length: 259 Bit Score: 280.77 E-value: 1.16e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 203 FNWAFFTAPDASdtRPEAAGLGVAIIGSIYMMLIVLVLALPLGVAASIYLEEFAPKNRWTDLIEVNISNLAAVPSIVFGI 282
Cdd:COG0581 21 LSWEFLTSSPSP--GPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGRLARLIRFAIDVLAGVPSIVYGL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 283 LGLAIFINMVGLPQSApIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAII 362
Cdd:COG0581 99 FGYALFVLTLGLGFSL-LAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQTIRKVVLPAALPGILTGVIL 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 363 GLAQALGETAPLLLIGMVAFvreypgGPPEGFFDPAAALPVQVYNWTQRGDPAFVERASGAIIVLLVFLVLMNIAAILLR 442
Cdd:COG0581 178 AIARAAGETAPLLFTAGVSP------FLPLSLFDPFATLPVHIYNLASSPYPAAQELAWAAALVLLLLVLLLNLLARLLR 251
|
....*..
gi 85672042 443 RRFERRW 449
Cdd:COG0581 252 RRFRKKL 258
|
|
| 3a0107s02c |
TIGR00974 |
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ... |
201-447 |
1.16e-67 |
|
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273373 Cd Length: 271 Bit Score: 216.72 E-value: 1.16e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 201 TKFNWAFFTapDASDTRPEAAGLGVAIIGSIYMMLIVLVLALPLGVAASIYLEEFAPKNRWTDLIEVNISNLAAVPSIVF 280
Cdd:TIGR00974 32 PALNLEFFT--KSPTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEYANGSRFTKIIRFAVDILAGVPSIVV 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 281 GILGLAIFINMVGLPQSAPIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGA 360
Cdd:TIGR00974 110 GLFGYGFFVLTYLGGGFSLLAGALALALLILPVIIRTTEEALKAVPKDLREASLALGATKWQTIFKVVLPAALPGILTGI 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 361 IIGLAQALGETAPLLLI-GMVAFVreypggpPEGFFDPAAALPVQVYNW-TQRGDPAFVERASGAIIVLLVFLVLMNIAA 438
Cdd:TIGR00974 190 ILSIARAAGETAPLLFTaGGSAFT-------PPNLFDPFATLPVLIYNLaSEGPYVEAQQLAWAAALVLIVLVLLLNLIA 262
|
....*....
gi 85672042 439 ILLRRRFER 447
Cdd:TIGR00974 263 RLLRRRFKK 271
|
|
| DUF3333 |
pfam11812 |
Domain of unknown function (DUF3333); This family of proteins are functionally uncharacterized. ... |
22-176 |
3.63e-46 |
|
Domain of unknown function (DUF3333); This family of proteins are functionally uncharacterized. This family is only found in bacteria. This presumed domain is typically between 116 to 159 amino acids in length.
Pssm-ID: 463357 Cd Length: 150 Bit Score: 156.54 E-value: 3.63e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 22 DARTKQRNAKEARFRMMGLVAVTIGLLSLVGLLTSILASGLSSFQQTYIELEVYLDPAKLDKTGNRNPEdiaKVSTFGYA 101
Cdd:pfam11812 1 EARLKRRYAAERRFRAYGIAAIALALLFLVILLGSIVSKGYTAFQQTEITLDVELDAAVIDPDGPRDPK---KLARANYP 77
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 85672042 102 PLIDAAMGAAIErvGAATDINAKAAGELISKEAPASLRDFVLANIDRIGETVQFDLLAAGRIDGFFKGRVTMETA 176
Cdd:pfam11812 78 ALIRQALAAAFP--EVTDRRDKRDLYGLISSGAAYQLRDRVLADPSLIGTTVTVWLLASDDVDQALKGRIDRDLP 150
|
|
| pstA |
PRK11268 |
phosphate ABC transporter permease PstA; |
219-375 |
3.02e-19 |
|
phosphate ABC transporter permease PstA;
Pssm-ID: 183065 [Multi-domain] Cd Length: 295 Bit Score: 87.82 E-value: 3.02e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 219 EAAGLGVAIIGSIYMMLIVLVLALPLGVAASIYLEEFAPKNRWTDLIEVNISNLAAVPSIVFGILGLAIFINMVGlpQSA 298
Cdd:PRK11268 75 AGGGLANAIAGSGLLILWATVVGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQME--HFS 152
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 85672042 299 PIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGETAPLL 375
Cdd:PRK11268 153 GWAGVIALALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLL 229
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
227-378 |
5.56e-18 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 81.56 E-value: 5.56e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 227 IIGSIYMMLIVLVLALPLGVAASIYLEEFAPKNRWtdLIEVNISNLAAVPSIVFGILGLAIFINM--VGLPQSAPIVGGL 304
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDR--LLRRIIDLLLSLPSLVLGLLLVLLFGVLlgWGILPGLGLPALI 78
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 85672042 305 VLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGETAPLLLIG 378
Cdd:cd06261 79 LALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLG 152
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
241-448 |
2.08e-13 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 68.48 E-value: 2.08e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 241 ALPLGVAASIYleefapKNRWTDLIEVNISNLA-AVPSIVFGILGLAIFINMVglPQSAPIVGGLVLTLMTLPTIIIATR 319
Cdd:pfam00528 1 GIPLGIIAALR------RGRRLDRLLRPLIDLLqALPSFVLAILLVVIAILSI--LGHGILPAIILALLGWAGYARLIRR 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 320 AALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGETAPLLLIGmvafvreypGGPPEGFFDPAA 399
Cdd:pfam00528 73 AALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLG---------SWPGLGLLLIEA 143
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 85672042 400 ALPVQvYNWTQrgdpafverasGAIIVLLVFLVLMNIAAILLRRRFERR 448
Cdd:pfam00528 144 ILGYD-YPEIQ-----------GPVLAAALILLLLNLLVDILQRLLDPR 180
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PstA |
COG0581 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
203-449 |
1.16e-92 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440346 [Multi-domain] Cd Length: 259 Bit Score: 280.77 E-value: 1.16e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 203 FNWAFFTAPDASdtRPEAAGLGVAIIGSIYMMLIVLVLALPLGVAASIYLEEFAPKNRWTDLIEVNISNLAAVPSIVFGI 282
Cdd:COG0581 21 LSWEFLTSSPSP--GPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGRLARLIRFAIDVLAGVPSIVYGL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 283 LGLAIFINMVGLPQSApIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAII 362
Cdd:COG0581 99 FGYALFVLTLGLGFSL-LAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQTIRKVVLPAALPGILTGVIL 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 363 GLAQALGETAPLLLIGMVAFvreypgGPPEGFFDPAAALPVQVYNWTQRGDPAFVERASGAIIVLLVFLVLMNIAAILLR 442
Cdd:COG0581 178 AIARAAGETAPLLFTAGVSP------FLPLSLFDPFATLPVHIYNLASSPYPAAQELAWAAALVLLLLVLLLNLLARLLR 251
|
....*..
gi 85672042 443 RRFERRW 449
Cdd:COG0581 252 RRFRKKL 258
|
|
| 3a0107s02c |
TIGR00974 |
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ... |
201-447 |
1.16e-67 |
|
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273373 Cd Length: 271 Bit Score: 216.72 E-value: 1.16e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 201 TKFNWAFFTapDASDTRPEAAGLGVAIIGSIYMMLIVLVLALPLGVAASIYLEEFAPKNRWTDLIEVNISNLAAVPSIVF 280
Cdd:TIGR00974 32 PALNLEFFT--KSPTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEYANGSRFTKIIRFAVDILAGVPSIVV 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 281 GILGLAIFINMVGLPQSAPIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGA 360
Cdd:TIGR00974 110 GLFGYGFFVLTYLGGGFSLLAGALALALLILPVIIRTTEEALKAVPKDLREASLALGATKWQTIFKVVLPAALPGILTGI 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 361 IIGLAQALGETAPLLLI-GMVAFVreypggpPEGFFDPAAALPVQVYNW-TQRGDPAFVERASGAIIVLLVFLVLMNIAA 438
Cdd:TIGR00974 190 ILSIARAAGETAPLLFTaGGSAFT-------PPNLFDPFATLPVLIYNLaSEGPYVEAQQLAWAAALVLIVLVLLLNLIA 262
|
....*....
gi 85672042 439 ILLRRRFER 447
Cdd:TIGR00974 263 RLLRRRFKK 271
|
|
| DUF3333 |
pfam11812 |
Domain of unknown function (DUF3333); This family of proteins are functionally uncharacterized. ... |
22-176 |
3.63e-46 |
|
Domain of unknown function (DUF3333); This family of proteins are functionally uncharacterized. This family is only found in bacteria. This presumed domain is typically between 116 to 159 amino acids in length.
Pssm-ID: 463357 Cd Length: 150 Bit Score: 156.54 E-value: 3.63e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 22 DARTKQRNAKEARFRMMGLVAVTIGLLSLVGLLTSILASGLSSFQQTYIELEVYLDPAKLDKTGNRNPEdiaKVSTFGYA 101
Cdd:pfam11812 1 EARLKRRYAAERRFRAYGIAAIALALLFLVILLGSIVSKGYTAFQQTEITLDVELDAAVIDPDGPRDPK---KLARANYP 77
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 85672042 102 PLIDAAMGAAIErvGAATDINAKAAGELISKEAPASLRDFVLANIDRIGETVQFDLLAAGRIDGFFKGRVTMETA 176
Cdd:pfam11812 78 ALIRQALAAAFP--EVTDRRDKRDLYGLISSGAAYQLRDRVLADPSLIGTTVTVWLLASDDVDQALKGRIDRDLP 150
|
|
| PstC |
COG0573 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
205-449 |
5.27e-40 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440338 [Multi-domain] Cd Length: 303 Bit Score: 145.23 E-value: 5.27e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 205 WAFFTAPD-ASDTRPEAAGLGVAIIGSIYMMLIVLVLALPLGVAASIYLEEFAPKN--RW-TDLIEVnisnLAAVPSIVF 280
Cdd:COG0573 56 LEFLTGTEwNPVSSNGEFGILPLIVGTLLVSLIALLIAVPLGLGIAIFLSEYAPPRlrRIlKPAIEL----LAGIPSVVY 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 281 GILGLAIFINMV--GLPQSAP----IVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMP 354
Cdd:COG0573 132 GFWGLFVLVPLLrdLFPWPPSgfslLTAGIVLAIMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARS 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 355 GILTGAIIGLAQALGET-APLLLIGMVAFVreypggpPEGFFDPAAALPVQVYNwtQRGDPAFVERASGAII----VLLV 429
Cdd:COG0573 212 GIIAAVILGLGRALGETmAVLMVAGNAPQI-------PFSLFDPGRTLTALIAL--EFGEAPFGSLHYSALFalglVLFV 282
|
250 260
....*....|....*....|
gi 85672042 430 FLVLMNIAAILLRRRFERRW 449
Cdd:COG0573 283 ITLLVNLLARLIVRRYREKY 302
|
|
| phosphate_pstC |
TIGR02138 |
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
205-445 |
6.14e-33 |
|
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 126.23 E-value: 6.14e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 205 WAFFTAPD---ASDTRPEAAGLGVAIIGSIYMMLIVLVLALPLGVAASIYLEEFAPKnRWTDLIEVNISNLAAVPSIVFG 281
Cdd:TIGR02138 40 LNFLTGTVwdpGSGPVQEQYGALPLIVGTLITSLIALLIAVPVGIGIAIFLSEIAPK-RVRSVLKPVVELLAGIPSVVYG 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 282 ILGLAIFI------------NMVGLPQ---SAPIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFH 346
Cdd:TIGR02138 119 FWGLFVLVpflkphfqpflgSNLGLIPlfgGPILTAGIVLAIMILPTIASISRDALRAVPRSYKEASYALGATKWETIRR 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 347 HVLPLAMPGILTGAIIGLAQALGETAPLLLIGMVAFVReypggPPEGFFDPAAALPVQVYNwtQRGDPAFVERASGAII- 425
Cdd:TIGR02138 199 VILPAARSGIVGAVVLGLGRALGETMAVTMVIGNVFPI-----SPLSLFDPGTTITSLIAN--QFGEASGGSVHTSALFa 271
|
250 260
....*....|....*....|...
gi 85672042 426 ---VLLVFLVLMNIAAILLRRRF 445
Cdd:TIGR02138 272 lglVLFVITLLVNILARYIVRRR 294
|
|
| pstA |
PRK11268 |
phosphate ABC transporter permease PstA; |
219-375 |
3.02e-19 |
|
phosphate ABC transporter permease PstA;
Pssm-ID: 183065 [Multi-domain] Cd Length: 295 Bit Score: 87.82 E-value: 3.02e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 219 EAAGLGVAIIGSIYMMLIVLVLALPLGVAASIYLEEFAPKNRWTDLIEVNISNLAAVPSIVFGILGLAIFINMVGlpQSA 298
Cdd:PRK11268 75 AGGGLANAIAGSGLLILWATVVGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQME--HFS 152
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 85672042 299 PIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGETAPLL 375
Cdd:PRK11268 153 GWAGVIALALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLL 229
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
226-448 |
1.12e-18 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 85.16 E-value: 1.12e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 226 AIIGSIYMMLIVLVLALPLGVAASIYLEEFapKNRWTDLIEVNISNLAAVPSIVFGIlGLAIFINMVGLPQSapiVGGLV 305
Cdd:COG1177 62 ALLNSLLIALLSTLLATVLGTPAALALARY--RFRGRRLLLALLLLPLVVPGIVLGV-ALLLLFSALGLSGG---LWGLI 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 306 L--TLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGEtaplllIGMVAFV 383
Cdd:COG1177 136 LahVVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDE------FVITLFL 209
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 85672042 384 reypGGPpegffdPAAALPVQVYNWTQRGDPAFVerASGAIIVLLVFLVLMNIAAILLRRRFERR 448
Cdd:COG1177 210 ----AGP------GVTTLPVYIYSMIRRGISPEI--NALSTLLILLSLLLLLLAERLRRRGERRR 262
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
227-378 |
5.56e-18 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 81.56 E-value: 5.56e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 227 IIGSIYMMLIVLVLALPLGVAASIYLEEFAPKNRWtdLIEVNISNLAAVPSIVFGILGLAIFINM--VGLPQSAPIVGGL 304
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDR--LLRRIIDLLLSLPSLVLGLLLVLLFGVLlgWGILPGLGLPALI 78
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 85672042 305 VLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGETAPLLLIG 378
Cdd:cd06261 79 LALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLG 152
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
197-444 |
4.11e-14 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 74.04 E-value: 4.11e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 197 GILTTKFNWAFFTAPDASDTRPEAAG--LGVAIIGSiymmLIVLVLALPLGVAASIYleefapKNRWTDLIEVnISNLA- 273
Cdd:COG1178 316 KALDDNLTLDNYRFVLLDPSLLRALLnsLLLALLAA----LLAVLLALLLAYLVRRR------RGRLARLLDR-LAMLPy 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 274 AVPSIVFGILGLAIFINMVGLP--QSAPIVGgLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPL 351
Cdd:COG1178 385 AVPGIVLGLGLLLLFNRPLPLLlyGTLAILV-LAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPL 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 352 AMPGILTGAIIGLAQALGE-TAPLLLigmvafvreypgGPPEgfFDPaaaLPVQVYNWTQRGDPAFVerASGAIIVLLVF 430
Cdd:COG1178 464 LRPGLLAAALLVFVTSMKElSATLLL------------RPPG--FET---LAVLIYQLASSGRYGEA--AALALLLVLVS 524
|
250
....*....|....
gi 85672042 431 LVLMNIAAILLRRR 444
Cdd:COG1178 525 LLPVLLLERLLGRR 538
|
|
| pstC |
PRK11275 |
phosphate ABC transporter permease PstC; |
202-371 |
4.38e-14 |
|
phosphate ABC transporter permease PstC;
Pssm-ID: 183070 Cd Length: 319 Bit Score: 72.81 E-value: 4.38e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 202 KFNWAFFTAPDAsDTRPEAAGLGVAIIGSIYMMLIVLVLALPLGVAASIYLEEFAPkNRWTDLIEVNISNLAAVPSIVFG 281
Cdd:PRK11275 51 KFGLSFLWTKEW-DAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAP-GWLKRPLGIAIELLAAIPSIVYG 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 282 ILGLAIF------------------INMVGLPQSAPIVG------GLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVG 337
Cdd:PRK11275 129 MWGLFVFaplfatyfqepvgnvlsnIPIVGALFSGPAFGigilaaGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIG 208
|
170 180 190
....*....|....*....|....*....|....
gi 85672042 338 ASKMQAIFHHVLPLAMPGILTGAIIGLAQALGET 371
Cdd:PRK11275 209 CTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGET 242
|
|
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
303-448 |
9.43e-14 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 70.08 E-value: 9.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 303 GLVL--TLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGET-APLLLIGM 379
Cdd:COG4149 92 GAVLasVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEFgATLMFAGN 171
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 85672042 380 VAFVREypggppegffdpaaALPVQVYNWTQRGDPAfveRASGAIIVLLVFLVLMNIAAILLRRRFERR 448
Cdd:COG4149 172 IPGKTQ--------------TLPLAIYDAVEAGDYA---AAHALSLILLAISFVVLLLLNLLNRRRRRR 223
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
241-448 |
2.08e-13 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 68.48 E-value: 2.08e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 241 ALPLGVAASIYleefapKNRWTDLIEVNISNLA-AVPSIVFGILGLAIFINMVglPQSAPIVGGLVLTLMTLPTIIIATR 319
Cdd:pfam00528 1 GIPLGIIAALR------RGRRLDRLLRPLIDLLqALPSFVLAILLVVIAILSI--LGHGILPAIILALLGWAGYARLIRR 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 320 AALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGETAPLLLIGmvafvreypGGPPEGFFDPAA 399
Cdd:pfam00528 73 AALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLG---------SWPGLGLLLIEA 143
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 85672042 400 ALPVQvYNWTQrgdpafverasGAIIVLLVFLVLMNIAAILLRRRFERR 448
Cdd:pfam00528 144 ILGYD-YPEIQ-----------GPVLAAALILLLLNLLVDILQRLLDPR 180
|
|
| OpuBB |
COG1174 |
ABC-type proline/glycine betaine transport system, permease component [Amino acid transport ... |
234-374 |
2.91e-12 |
|
ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 440787 [Multi-domain] Cd Length: 212 Bit Score: 65.46 E-value: 2.91e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 234 MLIVLVLALPLGVAASiyleefapKNRWTDLIEVNISNLA-AVPSIvfGILGLAIFInmVGLPQSAPIVgglVLTLMTLP 312
Cdd:COG1174 31 LLIALLIAVPLGILIT--------RRRRLAGLVLGVANILqTIPSL--ALLALLIPL--LGIGPAPAII---ALVLYALL 95
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 85672042 313 TIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGeTAPL 374
Cdd:COG1174 96 PILRNTYTGLRSVDPAVVEAARGMGMTPWQRLWRVELPLALPVILAGIRTAAVQNIG-TATL 156
|
|
| modB_ABC |
TIGR02141 |
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ... |
230-448 |
1.39e-11 |
|
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]
Pssm-ID: 273993 [Multi-domain] Cd Length: 208 Bit Score: 63.42 E-value: 1.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 230 SIYMMLIVLVLALPLGVAASIYLEEFapKNRWTDLIEVNISNLAAVPSIVFGILGLAIFINMVGLPQSAPIVG------- 302
Cdd:TIGR02141 3 SLKVAVIATLLLLPLGIPVAWLLARS--RFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLELFGislvftf 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 303 -GLVL--TLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGETAPLLLIGm 379
Cdd:TIGR02141 81 tGAVLasVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFA- 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 85672042 380 vafvreypGGPPegffDPAAALPVQVYNwtqrgdpaFVERASGAIIVLLVFLVLMNIAAILLRRRFERR 448
Cdd:TIGR02141 160 --------GNIP----GETQTIPLAIYD--------AVESDYELAHQLSLVLLAISLIVLLLVELLNKR 208
|
|
| TauC |
COG0600 |
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ... |
223-448 |
3.29e-10 |
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440365 [Multi-domain] Cd Length: 254 Bit Score: 60.16 E-value: 3.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 223 LGVAIIGsiymMLIVLVLALPLGVAASIYleefapkNRWTDLIEVNISNLAAVPSIVFGILGLAIFinmvGLPQSAPIVg 302
Cdd:COG0600 67 LLRVLLG----FALAALLGVPLGLLLGLS-------RLLRRLLDPLLVFLRPIPPLALAPLLILWF----GIGEASKIF- 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 303 glVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALgetapllligMVAF 382
Cdd:COG0600 131 --VIFLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGLAW----------IGLV 198
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 85672042 383 VREYPGGPpegffdpaAALPVQVYNWTQRGDPAFVErasGAIIVLLVFLVLMNIAAILLRRRFERR 448
Cdd:COG0600 199 VAELLGAS--------SGLGYLILDARQLLDTDLVF---AAILVIGLLGLLLDLLLRLLERRLLRW 253
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
205-370 |
1.47e-09 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 58.61 E-value: 1.47e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 205 WAFFTAPDAsdtrpeAAGLGVAIIGSIYMMLIVLVLALPLGVAASIYleEFaPKNRWTD-LIEVNIsnlaAVPSIVFGIL 283
Cdd:COG0555 44 WAVLTSPRV------LAALKLSLGTALIAALINLVFGLPLAWVLVRY--RF-PGKRLVDaLVDLPF----ALPTAVAGIA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 284 GLAIFINMVGLPQSAPIVG--------GLVL--TLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAM 353
Cdd:COG0555 111 LLLLFGPNGWLGQLLAPLGikvaftplGIVLaqTFVSLPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLL 190
|
170
....*....|....*..
gi 85672042 354 PGILTGAIIGLAQALGE 370
Cdd:COG0555 191 PALLTGFALAFARALGE 207
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
223-448 |
1.35e-08 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 57.09 E-value: 1.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 223 LGVAIIGSIYMMLIVLVLALPLGVAASIYLE--EFAPKNRWTDLIEVNIsnlaAVPSIV--FGILGL--------AIFIN 290
Cdd:COG1178 52 LWRALGNTLLLALLVTLLSLLLGVPLAWLLArtDFPGRRLLRWLLLLPL----ALPPYVvaLAWIALfgpngllnTLLRA 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 291 MVGLPQS-----APIVggLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLA 365
Cdd:COG1178 128 LFGLEPPdiyglGGII--LVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 366 QALGETAPLLLIGMVAFVreypggppegffdpaaaLPVQVYN-WTQRGDPAfverASGAIIVLLVFLVLmniAAILLRRR 444
Cdd:COG1178 206 LCLADFGTPLVLGGGYTT-----------------LTTAIYQaWLGDFDLG----AAAALALVLLLLVL---LLLLLERR 261
|
....
gi 85672042 445 FERR 448
Cdd:COG1178 262 LRRR 265
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
300-448 |
2.27e-08 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 55.15 E-value: 2.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 300 IVGGLVLTLmtLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGE-TAPLLLig 378
Cdd:COG1176 157 VVIGLVYVY--LPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAfVTPALL-- 232
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 85672042 379 mvafvreypgGPPEGFFdpaaaLPVQVYNW-TQRGDPAFVerASGAIIVLLVFLVLMNIAAILLRRRFERR 448
Cdd:COG1176 233 ----------GGGKVLM-----IGNLIYQQfLSALNWPLA--AALAVVLLLIVLLVLLLYLRLLRRRRLLG 286
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
309-370 |
2.82e-08 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 54.16 E-value: 2.82e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 85672042 309 MTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGE 370
Cdd:PRK09421 102 MAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGE 163
|
|
| DppB |
COG0601 |
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
234-369 |
2.24e-05 |
|
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];
Pssm-ID: 440366 [Multi-domain] Cd Length: 314 Bit Score: 46.21 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 234 MLIVLVLALPLGVAASIYleefapKNRWTDLIEVNISNLA-AVPSIVFGILGLAIFINMVGL-------PQSAPIVGGL- 304
Cdd:COG0601 106 LLLALLIGIPLGILAALR------RGSWLDRLITVLALLGiSIPSFWLGLLLILLFAVKLGWlpvsgrvSPWEDFLDALr 179
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 85672042 305 -------VLTLMTLPTIIIATRAALKSVPPS--IRdAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALG 369
Cdd:COG0601 180 hlilpalTLALGSLAGIARLTRSSMLEVLGQdyVR-TARAKGLSERRVLLRHALRNALIPVVTVLGLQLGGLLG 252
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
275-362 |
4.42e-05 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 45.09 E-value: 4.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 275 VPSIVfGILGLAIFINMVGLPQS-APIVggLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAM 353
Cdd:COG0395 122 IPGQV-LLIPLYLLFRQLGLLNTyWGLI--LPYLAFGLPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSK 198
|
....*....
gi 85672042 354 PGILTGAII 362
Cdd:COG0395 199 PALATVAIF 207
|
|
| DppC |
COG1173 |
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
221-368 |
6.50e-05 |
|
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];
Pssm-ID: 440786 [Multi-domain] Cd Length: 275 Bit Score: 44.33 E-value: 6.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 221 AGLGVAIIGSIYMMLIVLVLALPLGVAASIYleefapkNRWTDLIEVNISN-LAAVPSIVF----------GILGLAIFI 289
Cdd:COG1173 76 YGARISLLVGLLAVLIALVIGVLLGLLAGYF-------GGWVDAVLMRLVDvLLAFPSLLLaialvavlgpGLLNVILAL 148
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 85672042 290 NMVGLPQSAPIVGGLVLTLMTLPTIiiatraalksvppsirDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQAL 368
Cdd:COG1173 149 GLTGWPGYARLVRAQVLSLREREYV----------------EAARALGASPLRIIFRHILPNVLPPLIVQATLGIASAI 211
|
|
| PhnE |
TIGR01097 |
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound ... |
196-357 |
1.05e-04 |
|
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions]
Pssm-ID: 273441 [Multi-domain] Cd Length: 250 Bit Score: 43.68 E-value: 1.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 196 AGILTTKFNWAFFTA--------------PDASDTRPEAAGLGVAIIGSIYMMLIVLVLALPLGVAASiylEEFAPKNRW 261
Cdd:TIGR01097 19 WAFALLGFDLARLLAgpgqmadllgrmfpPDWSYLPRILKALLETLAMAILGTVLAAVLAVPLALLAA---RNITPSPWL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 262 TDLIEVNISNLAAVPSIVFGIlglaIFINMVGLpqsAPIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKM 341
Cdd:TIGR01097 96 YGLARLLLNFLRAIPELVWAL----IFVAAVGL---GPFAGVLALAFHTVGFLGKLFAEAIEEVDPGPVEALRATGASKL 168
|
170
....*....|....*.
gi 85672042 342 QAIFHHVLPLAMPGIL 357
Cdd:TIGR01097 169 QVIRYGVLPQVLPQFL 184
|
|
| PhnE |
COG3639 |
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport ... |
223-357 |
4.37e-04 |
|
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 442856 [Multi-domain] Cd Length: 244 Bit Score: 41.60 E-value: 4.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 223 LGVAIIGSiymmLIVLVLALPLGVAASiylEEFAPKNRWTDLIEVNISNLAAVPSIVFGIlglaIFINMVGLpqsAPIVG 302
Cdd:COG3639 57 LAIALLGT----LLGAVLALPLAFLAA---RNLAPNPWVRLLARRLLNVLRAIPELVWAL----IFVAAVGL---GPFAG 122
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 85672042 303 glVLTLMtLPTIIIATRA---ALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGIL 357
Cdd:COG3639 123 --VLALA-IHTIGFLGKLfaeAIEEIDPGPVEALRATGASRLQVIRYGVLPQVLPQFL 177
|
|
| potB |
PRK09497 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
300-369 |
8.14e-04 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 181910 Cd Length: 285 Bit Score: 41.21 E-value: 8.14e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 300 IVGGLVLTLmtLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALG 369
Cdd:PRK09497 153 VIIGLVYIL--LPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMG 220
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
276-359 |
8.44e-04 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 41.12 E-value: 8.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 276 PSIVFGILGLAIFInMVGLPqsapiVGGLVLTL----MTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPL 351
Cdd:PRK09500 106 PDIVMAISLLVLFM-LLGIQ-----LGFWSLLFahitFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPL 179
|
....*...
gi 85672042 352 AMPGILTG 359
Cdd:PRK09500 180 ALPAVAAG 187
|
|
| PRK10952 |
PRK10952 |
proline/glycine betaine ABC transporter permease ProW; |
301-359 |
8.49e-04 |
|
proline/glycine betaine ABC transporter permease ProW;
Pssm-ID: 236805 Cd Length: 355 Bit Score: 41.23 E-value: 8.49e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 301 VGGLVLTLM-TLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTG 359
Cdd:PRK10952 209 VPGVVVTIIfALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAG 268
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
279-368 |
2.23e-03 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 39.73 E-value: 2.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85672042 279 VFGILGLAiFINMVGLPQSAPIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILT 358
Cdd:COG1175 146 LLGALGLE-PINWLGDPSLALPAVIIVTVWKGTGFNMLIFLAGLQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILF 224
|
90
....*....|
gi 85672042 359 GAIIGLAQAL 368
Cdd:COG1175 225 VLVLSTIGAL 234
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
302-377 |
3.09e-03 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 39.23 E-value: 3.09e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 85672042 302 GGLVLTLM--TLPTIIIATRAALKSVPPSIRDAALGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGETAPLLLI 377
Cdd:CHL00187 138 LGVLLAMIfvSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGSIVII 215
|
|
| |
