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Conserved domains on  [gi|997172401|emb|CXT37518|]
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Galactose-6-phosphate isomerase%2C LacB subunit [Staphylococcus aureus]

Protein Classification

galactose-6-phosphate isomerase subunit LacB( domain architecture ID 10013100)

galactose-6-phosphate isomerase subunit LacB catalyzes the formation of D-tagatose 6-phosphate from D-galactose 6-phosphate

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK08622 PRK08622
galactose-6-phosphate isomerase subunit LacB; Reviewed
 1-171 5.16e-134

galactose-6-phosphate isomerase subunit LacB; Reviewed


:

Pssm-ID: 181506  Cd Length: 171  Bit Score: 370.90  E-value: 5.16e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   1 MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPG 80
Cdd:PRK08622   1 MKIAIGCDHIVTDEKMAVSDYLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEAVASGEADLGVCICGTGVGISNAVNKVPG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401  81 VRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEF 160
Cdd:PRK08622  81 IRSALVRDMTSALYAKEELNANVIGFGGKITGELLMCDIIDAFINAEYKPTEENKKLIEKIDHLEKPNADQANPHFFDEF 160

                        170
                 ....*....|.
gi 997172401 161 LEKWDRGEYHD 171
Cdd:PRK08622 161 LEKWDRGEYHD 171
 
Name Accession Description Interval E-value
PRK08622 PRK08622
galactose-6-phosphate isomerase subunit LacB; Reviewed
 1-171 5.16e-134

galactose-6-phosphate isomerase subunit LacB; Reviewed


Pssm-ID: 181506  Cd Length: 171  Bit Score: 370.90  E-value: 5.16e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   1 MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPG 80
Cdd:PRK08622   1 MKIAIGCDHIVTDEKMAVSDYLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEAVASGEADLGVCICGTGVGISNAVNKVPG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401  81 VRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEF 160
Cdd:PRK08622  81 IRSALVRDMTSALYAKEELNANVIGFGGKITGELLMCDIIDAFINAEYKPTEENKKLIEKIDHLEKPNADQANPHFFDEF 160

                        170
                 ....*....|.
gi 997172401 161 LEKWDRGEYHD 171
Cdd:PRK08622 161 LEKWDRGEYHD 171
lacB TIGR01119
galactose-6-phosphate isomerase, LacB subunit; This family contains four members from low GC ...
 1-171 3.70e-130

galactose-6-phosphate isomerase, LacB subunit; This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 130189  Cd Length: 171  Bit Score: 361.59  E-value: 3.70e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401    1 MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPG 80
Cdd:TIGR01119   1 MKIAIGCDHIVTDVKMEVSEFLKSKGYEVLDVGTYDFTRTHYPIFGKKVGEAVVSGEADLGVCICGTGVGINNAVNKVPG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   81 VRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEF 160
Cdd:TIGR01119  81 VRSALVRDMTSALYAKEELNANVIGFGGAIIGKLLMFDIIDAFIKAEYKPTEENKKLIAKIKHLETHNAKQADPHFFDEF 160

                         170
                  ....*....|.
gi 997172401  161 LEKWDRGEYHD 171
Cdd:TIGR01119 161 LEKWDRGEYHD 171
RpiB COG0698
Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Ribose 5-phosphate ...
 1-149 1.27e-63

Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Ribose 5-phosphate isomerase RpiB is part of the Pathway/BioSystem: Pentose phosphate pathway


Pssm-ID: 440462  Cd Length: 149  Bit Score: 192.22  E-value: 1.27e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   1 MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPG 80
Cdd:COG0698    1 MKIAIGSDHAGFELKEAIKEYLEEKGHEVVDFGTYSEDSVDYPDFAIKVAEAVASGEADRGILICGTGIGMSIAANKVPG 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 997172401  81 VRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPtEENKKLIAKIKHLETSNA 149
Cdd:COG0698   81 IRAALCHDPYSARLAREHNDANVLCLGARVIGPELAKEIVDAFLATEFEG-GRHQRRVDKISELEKENA 148
LacAB_rpiB pfam02502
Ribose/Galactose Isomerase; This family of proteins contains the sugar isomerase enzymes ...
 3-128 1.22e-58

Ribose/Galactose Isomerase; This family of proteins contains the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB).


Pssm-ID: 460573  Cd Length: 134  Bit Score: 179.12  E-value: 1.22e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401    3 IALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPGVR 82
Cdd:pfam02502   1 IAIGSDHAGFELKEEIKEYLEEKGHEVIDFGTYSEESVDYPDYAHKVAEAVASGEADRGILICGTGIGMSIAANKVPGIR 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 997172401   83 SALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEY 128
Cdd:pfam02502  81 AALCHDPYSAKLAREHNDANVLCLGARVIGPELAKEIVDAFLNTEF 126
 
Name Accession Description Interval E-value
PRK08622 PRK08622
galactose-6-phosphate isomerase subunit LacB; Reviewed
 1-171 5.16e-134

galactose-6-phosphate isomerase subunit LacB; Reviewed


Pssm-ID: 181506  Cd Length: 171  Bit Score: 370.90  E-value: 5.16e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   1 MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPG 80
Cdd:PRK08622   1 MKIAIGCDHIVTDEKMAVSDYLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEAVASGEADLGVCICGTGVGISNAVNKVPG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401  81 VRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEF 160
Cdd:PRK08622  81 IRSALVRDMTSALYAKEELNANVIGFGGKITGELLMCDIIDAFINAEYKPTEENKKLIEKIDHLEKPNADQANPHFFDEF 160

                        170
                 ....*....|.
gi 997172401 161 LEKWDRGEYHD 171
Cdd:PRK08622 161 LEKWDRGEYHD 171
lacB TIGR01119
galactose-6-phosphate isomerase, LacB subunit; This family contains four members from low GC ...
 1-171 3.70e-130

galactose-6-phosphate isomerase, LacB subunit; This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 130189  Cd Length: 171  Bit Score: 361.59  E-value: 3.70e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401    1 MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPG 80
Cdd:TIGR01119   1 MKIAIGCDHIVTDVKMEVSEFLKSKGYEVLDVGTYDFTRTHYPIFGKKVGEAVVSGEADLGVCICGTGVGINNAVNKVPG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   81 VRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEF 160
Cdd:TIGR01119  81 VRSALVRDMTSALYAKEELNANVIGFGGAIIGKLLMFDIIDAFIKAEYKPTEENKKLIAKIKHLETHNAKQADPHFFDEF 160

                         170
                  ....*....|.
gi 997172401  161 LEKWDRGEYHD 171
Cdd:TIGR01119 161 LEKWDRGEYHD 171
PRK12615 PRK12615
galactose-6-phosphate isomerase subunit LacB; Reviewed
 1-171 5.02e-116

galactose-6-phosphate isomerase subunit LacB; Reviewed


Pssm-ID: 171610  Cd Length: 171  Bit Score: 325.83  E-value: 5.02e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   1 MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPG 80
Cdd:PRK12615   1 MKIAIGCDHIVTNEKMAVSDFLKSKGYDVIDCGTYDHTRTHYPIFGKKVGEAVVNGQADLGVCICGTGVGINNAVNKVPG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401  81 VRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEF 160
Cdd:PRK12615  81 IRSALVRDMTTALYAKEELNANVIGFGGKITGELLMCDIIDAFIKAEYKETEENKKLIAKIAHLESHHANQEDPDFFTEF 160

                        170
                 ....*....|.
gi 997172401 161 LEKWDRGEYHD 171
Cdd:PRK12615 161 LEKWDRGEYHD 171
RpiB COG0698
Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Ribose 5-phosphate ...
 1-149 1.27e-63

Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Ribose 5-phosphate isomerase RpiB is part of the Pathway/BioSystem: Pentose phosphate pathway


Pssm-ID: 440462  Cd Length: 149  Bit Score: 192.22  E-value: 1.27e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   1 MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPG 80
Cdd:COG0698    1 MKIAIGSDHAGFELKEAIKEYLEEKGHEVVDFGTYSEDSVDYPDFAIKVAEAVASGEADRGILICGTGIGMSIAANKVPG 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 997172401  81 VRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPtEENKKLIAKIKHLETSNA 149
Cdd:COG0698   81 IRAALCHDPYSARLAREHNDANVLCLGARVIGPELAKEIVDAFLATEFEG-GRHQRRVDKISELEKENA 148
LacAB_rpiB pfam02502
Ribose/Galactose Isomerase; This family of proteins contains the sugar isomerase enzymes ...
 3-128 1.22e-58

Ribose/Galactose Isomerase; This family of proteins contains the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB).


Pssm-ID: 460573  Cd Length: 134  Bit Score: 179.12  E-value: 1.22e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401    3 IALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPGVR 82
Cdd:pfam02502   1 IAIGSDHAGFELKEEIKEYLEEKGHEVIDFGTYSEESVDYPDYAHKVAEAVASGEADRGILICGTGIGMSIAANKVPGIR 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 997172401   83 SALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEY 128
Cdd:pfam02502  81 AALCHDPYSAKLAREHNDANVLCLGARVIGPELAKEIVDAFLNTEF 126
PRK05571 PRK05571
ribose-5-phosphate isomerase B; Provisional
 1-128 2.11e-47

ribose-5-phosphate isomerase B; Provisional


Pssm-ID: 235509  Cd Length: 148  Bit Score: 151.08  E-value: 2.11e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   1 MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFT-RTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVP 79
Cdd:PRK05571   1 MKIAIGSDHAGFELKEEIIEHLEELGHEVIDLGPDSYDaSVDYPDYAKKVAEAVVAGEADRGILICGTGIGMSIAANKVK 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 997172401  80 GVRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEY 128
Cdd:PRK05571  81 GIRAALCHDTYSAHLAREHNNANVLALGARVIGPELAKDIVDAFLATEF 129
PTZ00215 PTZ00215
ribose 5-phosphate isomerase; Provisional
 1-148 3.02e-42

ribose 5-phosphate isomerase; Provisional


Pssm-ID: 185516  Cd Length: 151  Bit Score: 138.23  E-value: 3.02e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   1 MKIALGCDHIVTDTKMRVSEFLKSKGHE--VIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKV 78
Cdd:PTZ00215   3 KKVAIGSDHAGFDLKNEIIDYIKNKGKEykIEDMGTYTAESVDYPDFAEKVCEEVLKGEADTGILVCGSGIGISIAANKV 82

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401  79 PGVRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPtEENKKLIAKIKHLETSN 148
Cdd:PTZ00215  83 KGIRCALCHDHYTARMSRQHNNANVLAFGGRTTGIEVAKEIIDTFLSTPFEG-GRHTERIDKISAIEEEN 151
rpiB_lacA_lacB TIGR00689
sugar-phosphate isomerase, RpiB/LacA/LacB family; Proteins of known function in this family ...
 3-147 3.52e-39

sugar-phosphate isomerase, RpiB/LacA/LacB family; Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to complete the pentose phosphate pathway.


Pssm-ID: 129772  Cd Length: 144  Bit Score: 130.19  E-value: 3.52e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401    3 IALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPGVR 82
Cdd:TIGR00689   1 IAIGSDHAGLELKSEIIEHLKQKGHEVIDCGTLYDERVDYPDYAKLVADKVVAGEVSLGILICGTGIGMSIAANKFKGIR 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 997172401   83 SALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKlIAKIKHLETS 147
Cdd:TIGR00689  81 AALCVDEYTAALARQHNDANVLCLGSRVVGVELALSIVDAFLTTQFEGGRHQRR-IDKIIEYERE 144
rpiB TIGR01120
ribose 5-phosphate isomerase B; Involved in the non-oxidative branch of the pentose phospate ...
 2-129 5.20e-34

ribose 5-phosphate isomerase B; Involved in the non-oxidative branch of the pentose phospate pathway. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 130190  Cd Length: 143  Bit Score: 116.94  E-value: 5.20e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401    2 KIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPGV 81
Cdd:TIGR01120   1 KIAIGSDHAGFILKEEIKAFLVERGVKVIDKGTWSSERTDYPHYAKQVALAVAGGEVDGGILICGTGIGMSIAANKFAGI 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 997172401   82 RSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYK 129
Cdd:TIGR01120  81 RAALCSEPYMAQMSRLHNDANVLCLGERVVGLELAKSIVDAWLGTQFE 128
RPI_actino TIGR02133
ribose 5-phosphate isomerase; This family is a member of the RpiB/LacA/LacB subfamily ...
 1-132 2.17e-24

ribose 5-phosphate isomerase; This family is a member of the RpiB/LacA/LacB subfamily (TIGR00689) but lies outside the RpiB equivalog (TIGR01120) which is also a member of that subfamily. Ribose 5-phosphate isomerase is an essential enzyme of the pentose phosphate pathway; a pathway that appears to be present in the actinobacteria. The only candidates for ribose 5-phosphate isomerase in the Actinobacteria are members of this family.


Pssm-ID: 273989  Cd Length: 148  Bit Score: 92.52  E-value: 2.17e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401    1 MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFT-RTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVP 79
Cdd:TIGR02133   1 MRVVLGHDHAGFEYKEALWLDLAAHEPEVCDVGVYDADdDDDYPCFCIAAAEAVARDAADLGIVIGGSGNGEAIAANKVK 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 997172401   80 GVRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKPTE 132
Cdd:TIGR02133  81 GARAALAWDTASAGRARLHNNANVVGAGMRMHGLEEAFRLVFEFLGFEFDARS 133
PRK08621 PRK08621
galactose-6-phosphate isomerase subunit LacA; Reviewed
 1-128 5.40e-16

galactose-6-phosphate isomerase subunit LacA; Reviewed


Pssm-ID: 181505  Cd Length: 142  Bit Score: 70.51  E-value: 5.40e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   1 MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDV---GTYDFTRTHYpifgkKVGEQVVSGNADLGVCICGTGVGINNAVNK 77
Cdd:PRK08621   1 MAIIIGADKAGFELKEVVKDYLEDNKYEVVDVteeGAEDFVDSTL-----AVAKEVNKSEDNLGIVIDAYGAGSFMVATK 75

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 997172401  78 VPGVRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEY 128
Cdd:PRK08621  76 IKGMVAAEVSDERSAYMTRGHNNARMITMGSEIVGDGLAKNIIKGFVEGKY 126
PRK12613 PRK12613
galactose-6-phosphate isomerase subunit LacA; Provisional
 1-128 5.13e-09

galactose-6-phosphate isomerase subunit LacA; Provisional


Pssm-ID: 171609  Cd Length: 141  Bit Score: 52.24  E-value: 5.13e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   1 MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTY--DFTRTHYpifgkKVGEQVVSGNADLGVCICGTGVGINNAVNKV 78
Cdd:PRK12613   1 MAIILGADAHGNALKELIKSFLQEEGYDIIDVTDInsDFIDNTL-----AVAKAVNEAEGRLGIMVDAYGAGPFMVATKL 75

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 997172401  79 PGVRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEY 128
Cdd:PRK12613  76 KGMVAAEVSDERSAYMTRGHNNARMITMGAEIVGPELAKNIAKGFVTGPY 125
PRK09273 PRK09273
hypothetical protein; Provisional
 1-142 5.16e-07

hypothetical protein; Provisional


Pssm-ID: 181746 [Multi-domain]  Cd Length: 211  Bit Score: 47.65  E-value: 5.16e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401   1 MKIAL-------GCDHIVTDTKMRVSEflkSKGHEVIDVGTYDFTRTH--YPIFGKKVGEQVVSGNADLGVCICGTGVGI 71
Cdd:PRK09273   1 MKIALinensqaAKNAIIYEALKKVAD---PKGHEVFNYGMYDEEDHQltYVQNGIMASILLNSKAVDFVVTGCGTGQGA 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 997172401  72 NNAVNKVPGVRSALVRDMTSA-LYAKEElNANVI------GFG-GriiGELLMCDIIDAFINAEY---------KPTEEN 134
Cdd:PRK09273  78 MLALNSFPGVVCGYCIDPTDAyLFAQIN-NGNALslpfakGFGwG---AELNLRYIFEKLFTGERgegypkeraEPQQRN 153


                 ....*...
gi 997172401 135 KKLIAKIK 142
Cdd:PRK09273 154 AGILNEVK 161
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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