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Conserved domains on  [gi|524044961|emb|CCY26252|]
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putative uncharacterized protein [Firmicutes bacterium CAG:114]

Protein Classification

S-layer homology domain-containing protein( domain architecture ID 10448992)

S-layer homology (SLH) domain-containing protein similar to S-layer proteins that are major cell-wall components which form a paracrystalline mono-layered assembly that coats the surface of bacteria

Gene Ontology:  GO:0030115
PubMed:  10049812|10970841|8793886|26410425

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SLH pfam00395
S-layer homology domain;
91-132 1.90e-09

S-layer homology domain;


:

Pssm-ID: 459798 [Multi-domain]  Cd Length: 42  Bit Score: 52.59  E-value: 1.90e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 524044961   91 FADVPADAYYADGVAWCVQAGLITGKTETAFRPGDPMTREEF 132
Cdd:pfam00395   1 FKDVKSVAAWAEAVAALAELGIISGYPDGTFRPNEPITRAEA 42
SLH pfam00395
S-layer homology domain;
36-70 5.23e-03

S-layer homology domain;


:

Pssm-ID: 459798 [Multi-domain]  Cd Length: 42  Bit Score: 34.49  E-value: 5.23e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 524044961   36 HGHWAECqMTWAQEAGILTGTSSTTLSPDDTATRA 70
Cdd:pfam00395   7 VAAWAEA-VAALAELGIISGYPDGTFRPNEPITRA 40
 
Name Accession Description Interval E-value
SLH pfam00395
S-layer homology domain;
91-132 1.90e-09

S-layer homology domain;


Pssm-ID: 459798 [Multi-domain]  Cd Length: 42  Bit Score: 52.59  E-value: 1.90e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 524044961   91 FADVPADAYYADGVAWCVQAGLITGKTETAFRPGDPMTREEF 132
Cdd:pfam00395   1 FKDVKSVAAWAEAVAALAELGIISGYPDGTFRPNEPITRAEA 42
SLH pfam00395
S-layer homology domain;
36-70 5.23e-03

S-layer homology domain;


Pssm-ID: 459798 [Multi-domain]  Cd Length: 42  Bit Score: 34.49  E-value: 5.23e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 524044961   36 HGHWAECqMTWAQEAGILTGTSSTTLSPDDTATRA 70
Cdd:pfam00395   7 VAAWAEA-VAALAELGIISGYPDGTFRPNEPITRA 40
 
Name Accession Description Interval E-value
SLH pfam00395
S-layer homology domain;
91-132 1.90e-09

S-layer homology domain;


Pssm-ID: 459798 [Multi-domain]  Cd Length: 42  Bit Score: 52.59  E-value: 1.90e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 524044961   91 FADVPADAYYADGVAWCVQAGLITGKTETAFRPGDPMTREEF 132
Cdd:pfam00395   1 FKDVKSVAAWAEAVAALAELGIISGYPDGTFRPNEPITRAEA 42
SLH pfam00395
S-layer homology domain;
36-70 5.23e-03

S-layer homology domain;


Pssm-ID: 459798 [Multi-domain]  Cd Length: 42  Bit Score: 34.49  E-value: 5.23e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 524044961   36 HGHWAECqMTWAQEAGILTGTSSTTLSPDDTATRA 70
Cdd:pfam00395   7 VAAWAEA-VAALAELGIISGYPDGTFRPNEPITRA 40
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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