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Conserved domains on  [gi|384068338|emb|CCH01548|]
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hypothetical protein FAES_3541 [Fibrella aestuarina BUZ 2]

Protein Classification

gluconate 2-dehydrogenase subunit 3 family protein( domain architecture ID 10613030)

gluconate 2-dehydrogenase subunit 3 family protein such as Erwinia cypripedii gluconate 2-dehydrogenase subunit 3, also called the small subunit, which is part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate

EC:  1.-.-.-

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Gluconate_2-dh3 pfam13618
Gluconate 2-dehydrogenase subunit 3; This family corresponds to subunit 3 of the Gluconate ...
 62-191 5.64e-40

Gluconate 2-dehydrogenase subunit 3; This family corresponds to subunit 3 of the Gluconate 2-dehydrogenase enzyme that catalyzes the conversion of gluconate to 2-dehydro-D-gluconate EC:1.1.99.3.


:

Pssm-ID: 433352  Cd Length: 134  Bit Score: 133.16  E-value: 5.64e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384068338   62 AEMKTLTLLSDIILPADaKSGSASQAGVPAFIEFMVKDV--PNYQTPFRGGLAWLDNQCRKRYGKAFADTTRTQQIEMVD 139
Cdd:pfam13618   1 EEAALLAALVDRIIPAT-DTPGAKEAGVPEFIDRQLADCylPPDQEAFRAGLAALDAEAQKRYGKPFADLTPAQQDALLT 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 384068338  140 QIAYPEQAKPE-----MSQGVAFFNLMRNFTISGFYTSKMGIADLgyMGNTPNQWDG 191
Cdd:pfam13618  80 ALEKGAKAEPAgeawpAKAEKRFFSLLKDLTLEGYFTSPIGGGNV--LGWSPIGFPG 134
 
Name Accession Description Interval E-value
Gluconate_2-dh3 pfam13618
Gluconate 2-dehydrogenase subunit 3; This family corresponds to subunit 3 of the Gluconate ...
 62-191 5.64e-40

Gluconate 2-dehydrogenase subunit 3; This family corresponds to subunit 3 of the Gluconate 2-dehydrogenase enzyme that catalyzes the conversion of gluconate to 2-dehydro-D-gluconate EC:1.1.99.3.


Pssm-ID: 433352  Cd Length: 134  Bit Score: 133.16  E-value: 5.64e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384068338   62 AEMKTLTLLSDIILPADaKSGSASQAGVPAFIEFMVKDV--PNYQTPFRGGLAWLDNQCRKRYGKAFADTTRTQQIEMVD 139
Cdd:pfam13618   1 EEAALLAALVDRIIPAT-DTPGAKEAGVPEFIDRQLADCylPPDQEAFRAGLAALDAEAQKRYGKPFADLTPAQQDALLT 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 384068338  140 QIAYPEQAKPE-----MSQGVAFFNLMRNFTISGFYTSKMGIADLgyMGNTPNQWDG 191
Cdd:pfam13618  80 ALEKGAKAEPAgeawpAKAEKRFFSLLKDLTLEGYFTSPIGGGNV--LGWSPIGFPG 134
 
Name Accession Description Interval E-value
Gluconate_2-dh3 pfam13618
Gluconate 2-dehydrogenase subunit 3; This family corresponds to subunit 3 of the Gluconate ...
 62-191 5.64e-40

Gluconate 2-dehydrogenase subunit 3; This family corresponds to subunit 3 of the Gluconate 2-dehydrogenase enzyme that catalyzes the conversion of gluconate to 2-dehydro-D-gluconate EC:1.1.99.3.


Pssm-ID: 433352  Cd Length: 134  Bit Score: 133.16  E-value: 5.64e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384068338   62 AEMKTLTLLSDIILPADaKSGSASQAGVPAFIEFMVKDV--PNYQTPFRGGLAWLDNQCRKRYGKAFADTTRTQQIEMVD 139
Cdd:pfam13618   1 EEAALLAALVDRIIPAT-DTPGAKEAGVPEFIDRQLADCylPPDQEAFRAGLAALDAEAQKRYGKPFADLTPAQQDALLT 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 384068338  140 QIAYPEQAKPE-----MSQGVAFFNLMRNFTISGFYTSKMGIADLgyMGNTPNQWDG 191
Cdd:pfam13618  80 ALEKGAKAEPAgeawpAKAEKRFFSLLKDLTLEGYFTSPIGGGNV--LGWSPIGFPG 134
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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