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Conserved domains on  [gi|259687490|emb|CBG06148|]
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unnamed protein product [Drosophila melanogaster]

Protein Classification

protein lifeguard( domain architecture ID 10179627)

protein lifeguard similar to human protein lifeguard 2, an antiapoptotic protein which protects cells uniquely from Fas-induced apoptosis, and regulates Fas-mediated apoptosis in neurons by interfering with caspase-8 activation

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
LFG_like cd10428
Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis; ...
44-261 2.53e-87

Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis; Lifeguard (LFG) inhibits Fas-mediated apoptosis and interacts with the death receptor FasR/CD95/Apo1. LFG has been shown to interact with Bax and is supposed to be integral to cellular membranes such as the ER. A close homolog, PP1201 or RECS1, appears located in the Golgi compartment and also interacts with the Fas receptor CD95/Apo1. PP1201 is expressed in response to shear stress.


:

Pssm-ID: 198410  Cd Length: 217  Bit Score: 258.63  E-value: 2.53e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490  44 GFCSASIRRGFIRKVYLILLAQLITSLVVIVSLTADKRVRLMVAESTWIFVVAILIVVFSLVALGCNEDLRRQTPANFIF 123
Cdd:cd10428    1 PFDDKTIRRAFIRKVYSILTIQLLVTVAVIALFTFHDPVKKFVRKNPWLYYVSYIVFFITYIALACCEGLRRRFPWNLIL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490 124 LSAFTIAESFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVTIFVGGHMVTT 203
Cdd:cd10428   81 LGIFTLAMSYMLGTIASFYDTKAVLIAVGITAVVCLGLTLFAFQTKYDFTSCGGVLFVLSIVLLIFGIVAIFFYVKWLHI 160
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 259687490 204 IYASLSALLFSVYLVYDTQLMMGGKHrYSISPEEYIFAALNIYMDVMNIFLDILQLIG 261
Cdd:cd10428  161 VYASLGALLFSLYLAVDTQLLMGGRK-YELSPEEYIFAALNIYVDIVNIFLYILQLIG 217
 
Name Accession Description Interval E-value
LFG_like cd10428
Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis; ...
44-261 2.53e-87

Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis; Lifeguard (LFG) inhibits Fas-mediated apoptosis and interacts with the death receptor FasR/CD95/Apo1. LFG has been shown to interact with Bax and is supposed to be integral to cellular membranes such as the ER. A close homolog, PP1201 or RECS1, appears located in the Golgi compartment and also interacts with the Fas receptor CD95/Apo1. PP1201 is expressed in response to shear stress.


Pssm-ID: 198410  Cd Length: 217  Bit Score: 258.63  E-value: 2.53e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490  44 GFCSASIRRGFIRKVYLILLAQLITSLVVIVSLTADKRVRLMVAESTWIFVVAILIVVFSLVALGCNEDLRRQTPANFIF 123
Cdd:cd10428    1 PFDDKTIRRAFIRKVYSILTIQLLVTVAVIALFTFHDPVKKFVRKNPWLYYVSYIVFFITYIALACCEGLRRRFPWNLIL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490 124 LSAFTIAESFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVTIFVGGHMVTT 203
Cdd:cd10428   81 LGIFTLAMSYMLGTIASFYDTKAVLIAVGITAVVCLGLTLFAFQTKYDFTSCGGVLFVLSIVLLIFGIVAIFFYVKWLHI 160
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 259687490 204 IYASLSALLFSVYLVYDTQLMMGGKHrYSISPEEYIFAALNIYMDVMNIFLDILQLIG 261
Cdd:cd10428  161 VYASLGALLFSLYLAVDTQLLMGGRK-YELSPEEYIFAALNIYVDIVNIFLYILQLIG 217
Bax1-I pfam01027
Inhibitor of apoptosis-promoting Bax1; Programmed cell-death involves a set of Bcl-2 family ...
52-260 2.71e-32

Inhibitor of apoptosis-promoting Bax1; Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak). Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localized to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localize predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress. BI-1 appears to exert its effect through an interaction with calmodulin. The budding yeast member of this family has been found unexpectedly to encode a BH3 domain-containing protein (Ybh3p) that regulates the mitochondrial pathway of apoptosis in a phylogenetically conserved manner. Examination of the crystal structure of a bacterial member of this family shows that these proteins mediate a calcium leak across the membrane that is pH-dependent. Calcium homoeostasis balances passive calcium leak with active calcium uptake. The structure exists in a pore-closed and pore-open conformation, at pHs of 8 and 6 respectively, and the pore can be opened by intracrystalline transition; together these findings suggest that pH controls the conformational transition.


Pssm-ID: 460029  Cd Length: 207  Bit Score: 117.66  E-value: 2.71e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490   52 RGFIRKVYLILLAQLITSLVVIVSLTADKRVRLMVAESTWIFVVAILIVVFSLVALGCNEDLRRQTPANFIFLSAFTIAE 131
Cdd:pfam01027   1 RQFLRKVYGLLALGLLLTAAVAYLVLSSPALLFPSLHPPLFWVLIIAPLGLLFGALLLARKRKYSSNVALLLLLAFTLLM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490  132 SFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVTIFVGGHMVTTIYASLSAL 211
Cdd:pfam01027  81 GLTLGPLLLVYTGAIIATAFLGTAAIFGGLSLYALTTKRDLSFLGGFLFAGLIGLIVASLVNIFLPSSALSLAISYLGVL 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 259687490  212 LFSVYLVYDTQLMMggKHRYSISPEEYIFAALNIYMDVMNIFLDILQLI 260
Cdd:pfam01027 161 LFSGFILYDTQRII--KRYGEYGDYDAILAALSLYLDFINLFLSLLRIL 207
YbhL COG0670
Integral membrane protein YbhL, putative Ca2+ regulator, Bax inhibitor (BI-1)/TMBIM family ...
47-264 4.69e-28

Integral membrane protein YbhL, putative Ca2+ regulator, Bax inhibitor (BI-1)/TMBIM family [Inorganic ion transport and metabolism];


Pssm-ID: 440434  Cd Length: 231  Bit Score: 107.19  E-value: 4.69e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490  47 SASIRRGFIRKVYLIL-LAQLITSLVVIVSLTADKRVRLMVAEST--WIFVVAILIVVFSLVALGcnedLRRQTPANFIF 123
Cdd:COG0670   15 SDAGLRKVLRNTYGLLaLGLLLTALVAYLGMALPGLAALLFGSPGlfWVLLIAPLGLVFLLSKLA----NRANSAAALAL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490 124 LSAFTIAE----SFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVTIFVGGH 199
Cdd:COG0670   91 LFAYTALMgltlSPILLVYTGLSGPASIAQAFGGTAATFGGLSLYGYTTKRDLSFLGSFLFMGLIGLIIASLVNIFLQSP 170
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 259687490 200 MVTTIYASLSALLFSVYLVYDTQLMmggKHRYSiSPEEYIFAALNIYMDVMNIFLDILQLIGGSD 264
Cdd:COG0670  171 ALSLAISVAGVLLFSGLTLYDTQRI---KHGYE-TNKQYIMAALSLYLDFINLFLSLLRLLGGRR 231
 
Name Accession Description Interval E-value
LFG_like cd10428
Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis; ...
44-261 2.53e-87

Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis; Lifeguard (LFG) inhibits Fas-mediated apoptosis and interacts with the death receptor FasR/CD95/Apo1. LFG has been shown to interact with Bax and is supposed to be integral to cellular membranes such as the ER. A close homolog, PP1201 or RECS1, appears located in the Golgi compartment and also interacts with the Fas receptor CD95/Apo1. PP1201 is expressed in response to shear stress.


Pssm-ID: 198410  Cd Length: 217  Bit Score: 258.63  E-value: 2.53e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490  44 GFCSASIRRGFIRKVYLILLAQLITSLVVIVSLTADKRVRLMVAESTWIFVVAILIVVFSLVALGCNEDLRRQTPANFIF 123
Cdd:cd10428    1 PFDDKTIRRAFIRKVYSILTIQLLVTVAVIALFTFHDPVKKFVRKNPWLYYVSYIVFFITYIALACCEGLRRRFPWNLIL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490 124 LSAFTIAESFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVTIFVGGHMVTT 203
Cdd:cd10428   81 LGIFTLAMSYMLGTIASFYDTKAVLIAVGITAVVCLGLTLFAFQTKYDFTSCGGVLFVLSIVLLIFGIVAIFFYVKWLHI 160
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 259687490 204 IYASLSALLFSVYLVYDTQLMMGGKHrYSISPEEYIFAALNIYMDVMNIFLDILQLIG 261
Cdd:cd10428  161 VYASLGALLFSLYLAVDTQLLMGGRK-YELSPEEYIFAALNIYVDIVNIFLYILQLIG 217
GAAP_like cd10429
Golgi antiapoptotic protein; GAAP (or transmembrane BAX inhibitor motif containing 4) is a ...
46-264 1.75e-52

Golgi antiapoptotic protein; GAAP (or transmembrane BAX inhibitor motif containing 4) is a regulator of apoptosis that is related to the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Human GAAP has been linked to the modulation of intracellular fluxes of Ca(2+), by suppressing influx from the extracellular medium and reducing release from intracellular stores. A viral homolog (vaccinia virus vGAAP) acts similar to its human counterpart in inhibiting apoptosis.


Pssm-ID: 198411  Cd Length: 233  Bit Score: 170.48  E-value: 1.75e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490  46 CSASIRRGFIRKVYLILLAQLITSLVVIVSLTADKRVRLMVAESTWIFVVAILIVVFSLVALGCNedlRRQTPANFIFLS 125
Cdd:cd10429   22 AEPEIRMAFLRKVYSILSVQLLATTAVSALFYLSPSIKTFVQSHPWLFLISLIGSLILLIALYWK---RHSHPVNLILLS 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490 126 AFTIAESFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVTIFVG-GHMVTTI 204
Cdd:cd10429   99 LFTLCEAYTVGLVVSFYDGKIVLQALILTLGVFVGLTAYTFQTKRDFSSFGALLFILLWALILLALIFQFFPySPTFELV 178
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490 205 YASLSALLFSVYLVYDTQLMMggkHRYsiSPEEYIFAALNIYMDVMNIFLDILQLIGGSD 264
Cdd:cd10429  179 YAGLGALLFSGYIVYDTQLIM---KRL--SPDEYILAAISLYLDIINLFLSILRILAAMN 233
Bax1-I pfam01027
Inhibitor of apoptosis-promoting Bax1; Programmed cell-death involves a set of Bcl-2 family ...
52-260 2.71e-32

Inhibitor of apoptosis-promoting Bax1; Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak). Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localized to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localize predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress. BI-1 appears to exert its effect through an interaction with calmodulin. The budding yeast member of this family has been found unexpectedly to encode a BH3 domain-containing protein (Ybh3p) that regulates the mitochondrial pathway of apoptosis in a phylogenetically conserved manner. Examination of the crystal structure of a bacterial member of this family shows that these proteins mediate a calcium leak across the membrane that is pH-dependent. Calcium homoeostasis balances passive calcium leak with active calcium uptake. The structure exists in a pore-closed and pore-open conformation, at pHs of 8 and 6 respectively, and the pore can be opened by intracrystalline transition; together these findings suggest that pH controls the conformational transition.


Pssm-ID: 460029  Cd Length: 207  Bit Score: 117.66  E-value: 2.71e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490   52 RGFIRKVYLILLAQLITSLVVIVSLTADKRVRLMVAESTWIFVVAILIVVFSLVALGCNEDLRRQTPANFIFLSAFTIAE 131
Cdd:pfam01027   1 RQFLRKVYGLLALGLLLTAAVAYLVLSSPALLFPSLHPPLFWVLIIAPLGLLFGALLLARKRKYSSNVALLLLLAFTLLM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490  132 SFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVTIFVGGHMVTTIYASLSAL 211
Cdd:pfam01027  81 GLTLGPLLLVYTGAIIATAFLGTAAIFGGLSLYALTTKRDLSFLGGFLFAGLIGLIVASLVNIFLPSSALSLAISYLGVL 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 259687490  212 LFSVYLVYDTQLMMggKHRYSISPEEYIFAALNIYMDVMNIFLDILQLI 260
Cdd:pfam01027 161 LFSGFILYDTQRII--KRYGEYGDYDAILAALSLYLDFINLFLSLLRIL 207
BI-1-like cd06181
BAX inhibitor (BI)-1/YccA-like protein family; Mammalian members of the BAX inhibitor (BI)-1 ...
50-261 2.13e-29

BAX inhibitor (BI)-1/YccA-like protein family; Mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. This superfamily also contains the lifeguard(LFG)-like proteins and other subfamilies which appear to be related by common descent and also function as inhibitors of apoptosis. In plants, BI-1 like proteins play a role in pathogen resistance. A prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.


Pssm-ID: 198409  Cd Length: 202  Bit Score: 109.81  E-value: 2.13e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490  50 IRRGFIRKVYLILLAQLITSLVVIVSLtadkrvrlMVAESTWIFVVAILIVVFSLVALGCNEDL-RRQTPANFIFLSAFT 128
Cdd:cd06181    1 STKDFLRKVYMILALQLLLTAATATAF--------TVCDPGWYWSPALMGLLTSMLALMATAAMiRAKMPVNLILLFGFT 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490 129 IAESFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVTIFVGGHMVTTIYASL 208
Cdd:cd06181   73 GLMGYVVGPLLFFYGPTILLRALGGTALVFFGLTVYALQARKDFLFLGGPLMAGLGFLLLSFLLNTFFYSPWLHLVAAAV 152
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 259687490 209 SALLFSVYLVYDTQLMMggkHRYSISPEEYIFAALNIYMDVMNIFLDILQLIG 261
Cdd:cd06181  153 GLVLFCGFLLYDTQLII---HKAEVGPEDYINACISLYLDIINIFIRLLTILA 202
YbhL COG0670
Integral membrane protein YbhL, putative Ca2+ regulator, Bax inhibitor (BI-1)/TMBIM family ...
47-264 4.69e-28

Integral membrane protein YbhL, putative Ca2+ regulator, Bax inhibitor (BI-1)/TMBIM family [Inorganic ion transport and metabolism];


Pssm-ID: 440434  Cd Length: 231  Bit Score: 107.19  E-value: 4.69e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490  47 SASIRRGFIRKVYLIL-LAQLITSLVVIVSLTADKRVRLMVAEST--WIFVVAILIVVFSLVALGcnedLRRQTPANFIF 123
Cdd:COG0670   15 SDAGLRKVLRNTYGLLaLGLLLTALVAYLGMALPGLAALLFGSPGlfWVLLIAPLGLVFLLSKLA----NRANSAAALAL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490 124 LSAFTIAE----SFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVTIFVGGH 199
Cdd:COG0670   91 LFAYTALMgltlSPILLVYTGLSGPASIAQAFGGTAATFGGLSLYGYTTKRDLSFLGSFLFMGLIGLIIASLVNIFLQSP 170
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 259687490 200 MVTTIYASLSALLFSVYLVYDTQLMmggKHRYSiSPEEYIFAALNIYMDVMNIFLDILQLIGGSD 264
Cdd:COG0670  171 ALSLAISVAGVLLFSGLTLYDTQRI---KHGYE-TNKQYIMAALSLYLDFINLFLSLLRLLGGRR 231
BI-1-like_bacterial cd10432
Bacterial BAX inhibitor (BI)-1/YccA-like proteins; This family is comprised of bacterial ...
51-261 1.15e-27

Bacterial BAX inhibitor (BI)-1/YccA-like proteins; This family is comprised of bacterial relatives of the mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. In plants, BI-1 like proteins play a role in pathogen resistance. A characterized prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.


Pssm-ID: 198414  Cd Length: 211  Bit Score: 105.72  E-value: 1.15e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490  51 RRGFIRKVYLILLAQL-ITSLVVIVSLTADKRVRLMVAESTWIFVVAILIVVFSLVALGcnedLRRQTPANFIFLSAFTI 129
Cdd:cd10432    2 LRSFMKKVYGLMAAGLlLTAVGAYVGASTPALLLIAGSPLMWVLLIAELALVFGLSFRI----NKMSVATALPLFFAFAA 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490 130 AESFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVTIFVGGHMVTTIYASLS 209
Cdd:cd10432   78 LTGLTLSPILLVYTGASIAQAFFTTAATFGGLSLYGYTTKKDLSFLGSFLFMGLIGLIIASLVNIFLQSSALQFAISAIG 157
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 259687490 210 ALLFSVYLVYDTQ--LMMGGKHRYSISPEEYIFAALNIYMDVMNIFLDILQLIG 261
Cdd:cd10432  158 VLIFSGLIAYDTQriKRMYEAGGGESGYKDAIMGALSLYLDFINLFLFLLRLFG 211
YccA_like cd10433
YccA-like proteins; A prokaryotic member of the BAX inhibitor (BI)-1 like family of small ...
91-263 9.11e-12

YccA-like proteins; A prokaryotic member of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.


Pssm-ID: 198415  Cd Length: 205  Bit Score: 62.60  E-value: 9.11e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490  91 WIFVVAILIVVFSLVALgcnedlrRQTPANFIFLSAFTIAESFLLGVAACRYAPME-----IFMAVLITASVCLGLTLFA 165
Cdd:cd10433   39 LLTLVGAYGLLFLIEKT-------RNSAWGIVLVFAFTGFMGYTLGPILNMYLALPnggqiIMTALGGTAAIFFGLSAYA 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490 166 LQTRYDFTVMGGLLVSCLIILLFFGIVTIFVGGHMVTTIYASLSALLFSVYLVYDTQLMMGGKHRysispeEYIFAALNI 245
Cdd:cd10433  112 LTTKKDFSFLGGFLFVGAIVLLLAAVANIFLQIPALSLAISAAFVLFSSGFILYDTSRIIHGGET------NYIMATVSL 185
                        170
                 ....*....|....*...
gi 259687490 246 YMDVMNIFLDILQLIGGS 263
Cdd:cd10433  186 YVSIYNLFVSLLNLLGAF 203
BI-1 cd10430
BAX inhibitor (BI)-1; Mammalian members of the BAX inhibitor (BI)-1 like family of small ...
150-259 2.40e-09

BAX inhibitor (BI)-1; Mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. In plants, BI-1 like proteins play a role in pathogen resistance.


Pssm-ID: 198412  Cd Length: 213  Bit Score: 55.69  E-value: 2.40e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490 150 AVLITASVCLGLTLFALQT-RYDFTVMGGLLVSCLIILLFFGIVTIFVGGHMVTTIYASLSALLFSVYLVYDTQLMMggk 228
Cdd:cd10430  100 AFLGTAVIFACFSLAALLAkRREYLYLGGLLSSALSILLLVSLANIFGGSKFLFQAELYLGLLVFCGFVLFDTQMII--- 176
                         90       100       110
                 ....*....|....*....|....*....|.
gi 259687490 229 HRYSISPEEYIFAALNIYMDVMNIFLDILQL 259
Cdd:cd10430  177 EKAENGDRDYIWHALDLFVDFVALFRRLLII 207
GHITM cd10431
Growth-hormone inducible transmembrane protein; GHITM appears to be ubiquitiously expressed in ...
150-262 2.87e-06

Growth-hormone inducible transmembrane protein; GHITM appears to be ubiquitiously expressed in mammalian cells and expression has also been observed in various cancer cell lines. A cytoprotective function has been suggested. It is closely related to the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect.


Pssm-ID: 198413  Cd Length: 264  Bit Score: 47.38  E-value: 2.87e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259687490 150 AVLITASVCLGLTLFALQTRYD-FTVMGGLLVSCLIILLFFGIVTIFV-------GGHMVTTIYASLsaLLFSVYLVYDT 221
Cdd:cd10431  138 AALYTAGIVGGLSTVAACAPSEkFLYMGGPLAIGLGVVFASSLGSMFLppttalgAGLYSVSLYGGL--VLFGGFLLYDT 215
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 259687490 222 QLMMggKH-----RYSISPEEYIFAALNIYMDVMNIFLDILQLIGG 262
Cdd:cd10431  216 QKII--KRaethpLYGVRKYDPINASMSIYMDTINIFIRLVTILAG 259
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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