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Conserved domains on  [gi|257324001|emb|CBC28886|]
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unnamed protein product [Arabidopsis thaliana]

Protein Classification

NRT1/PTR family MFS transporter( domain architecture ID 13024510)

NRT1/PTR (nitrate transporter/peptide transporter) family major facilitator superfamily (MFS) transporter is a proton-coupled transporter that facilitates the transport of one or more from a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_NPF7 cd17419
NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The ...
63-580 0e+00

NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF7 includes the nitrate transporters AtNPF7.2 and AtNPF7.3, as well as the dipeptide transporter OsNPF7.3. AtNPF7.3 is a bidirectional transporter involved in nitrate influx and efflux. NPF7 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340977 [Multi-domain]  Cd Length: 447  Bit Score: 694.50  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17419    1 WKSAIFILVNQGLATLAYFGVGVNLVLYLTRVMHQSNASAANNVSNWTGTVYITPLIGAFLSDSYWGRYWTSTLFQAIFV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 143 IGVGLLSFVSWFFLIKPRGCGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD----KNSKAAFFS 218
Cdd:cd17419   81 IGLLLLTLSSALPSLRPPQCGDGDLKCPPASAAQTTFLYFSLYLIALGYGGYQPCIATLGADQFDDEdpieKASKSAFFS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 219 YFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrp 298
Cdd:cd17419  161 YFYQALNLGSLFSNTILVYFEDNGSWGLGFGISAGAAFIGLVLFLAGTPFYR---------------------------- 212
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17419  213 -----------------------------------------------------------EVKCILRLLPIWLSTIIYSVV 233
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 379 FTQMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVR--------PTELMRMGIGLIIGIMAMV 450
Cdd:cd17419  234 YTQMATLFVEQGAAMDTSFGNFKIPPASMSVFEILSVAVGTVLYRKFLVPLLRkvtghpkgITELQRMGIGLVIGILAMV 313
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 451 AAGLTEIQRLKRVVPG-----QKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYV 525
Cdd:cd17419  314 VAALVEIQRLKVARPSnlddpTSPSPLSIFWQIPQYVLVGASEVFTYVGQLEFFYDQAPDGLRSLGSALCMASVALGNYL 393
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 257324001 526 SSLMVNIVMAITKRGENsPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17419  394 SSLLVTIVNKVTTKDGS-PGWIPDNLNKGHLDRFYWLLAALSGIDFVVFLICAKW 447
 
Name Accession Description Interval E-value
MFS_NPF7 cd17419
NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The ...
63-580 0e+00

NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF7 includes the nitrate transporters AtNPF7.2 and AtNPF7.3, as well as the dipeptide transporter OsNPF7.3. AtNPF7.3 is a bidirectional transporter involved in nitrate influx and efflux. NPF7 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340977 [Multi-domain]  Cd Length: 447  Bit Score: 694.50  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17419    1 WKSAIFILVNQGLATLAYFGVGVNLVLYLTRVMHQSNASAANNVSNWTGTVYITPLIGAFLSDSYWGRYWTSTLFQAIFV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 143 IGVGLLSFVSWFFLIKPRGCGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD----KNSKAAFFS 218
Cdd:cd17419   81 IGLLLLTLSSALPSLRPPQCGDGDLKCPPASAAQTTFLYFSLYLIALGYGGYQPCIATLGADQFDDEdpieKASKSAFFS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 219 YFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrp 298
Cdd:cd17419  161 YFYQALNLGSLFSNTILVYFEDNGSWGLGFGISAGAAFIGLVLFLAGTPFYR---------------------------- 212
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17419  213 -----------------------------------------------------------EVKCILRLLPIWLSTIIYSVV 233
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 379 FTQMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVR--------PTELMRMGIGLIIGIMAMV 450
Cdd:cd17419  234 YTQMATLFVEQGAAMDTSFGNFKIPPASMSVFEILSVAVGTVLYRKFLVPLLRkvtghpkgITELQRMGIGLVIGILAMV 313
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 451 AAGLTEIQRLKRVVPG-----QKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYV 525
Cdd:cd17419  314 VAALVEIQRLKVARPSnlddpTSPSPLSIFWQIPQYVLVGASEVFTYVGQLEFFYDQAPDGLRSLGSALCMASVALGNYL 393
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 257324001 526 SSLMVNIVMAITKRGENsPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17419  394 SSLLVTIVNKVTTKDGS-PGWIPDNLNKGHLDRFYWLLAALSGIDFVVFLICAKW 447
PTR2 pfam00854
POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton ...
173-547 2.27e-81

POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.


Pssm-ID: 425909 [Multi-domain]  Cd Length: 392  Bit Score: 261.48  E-value: 2.27e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  173 SSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDD-DKNSKAAFFSYFYFALNVGALFSNTILVYFEDKGLWTEGFLVS 251
Cdd:pfam00854  28 PPVHVALFFIGLALIALGTGGIKPNVSSFGGDQFEEtDPRRRSRFFSIFYFSINAGSLISTIITPYLQQNYGYPLGFGLP 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  252 LGSAIVALVAFLAPTRQYRYVKPCGNPLPRVAQV-FVATARKWSVVRpgdphelyelegpesAIKGSRKIFHSTKFLFLD 330
Cdd:pfam00854 108 AVGMIIALLVFLLGSRMYKKKPPKGNVLTKVFKVlPVAAWNKVKLNG---------------SSAGIKKLHWLDWARELD 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  331 RAAVITENdRNGTRSNAWrlCSVTQVEEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGDVMNAYVGKFHIPAASMSVF 410
Cdd:pfam00854 173 ALIILGIV-VPGIFFNIW--CTKTKVEEVKRLLRVLPLFLPLIMFWALYDQMGTSWVLQARTMNRKIGSFEIPPAQFQAF 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  411 DIFSVFVSTGIYRHIIFPYVR-----PTELMRMGIGLIIGIMAMVAAGLTEIQRLK--RVVPGQKESELTILWQIPQYVL 483
Cdd:pfam00854 250 NAILVLIFIPIFDRLVYPLGRkctggLTPLQKMAVGLFLASLAFAIAAIVQLKRNDtgPEFPIAQEVPISVLWLIPQYLL 329
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 257324001  484 VGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSLMVNIVMAITKRGENSpGWI 547
Cdd:pfam00854 330 IGFGELFISIGGLEFFYKLAPKSMTSLITGLFLLTNALGNFLSGVIATLTAKPTNVLGAY-GWL 392
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
87-589 3.60e-26

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 112.22  E-value: 3.60e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  87 LVLFLTR-----VMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFvswfflikprg 161
Cdd:COG3104   37 LVLYLTAsladgGLGLSEADAAAIYGAYTALVYLTPLLGGWLADRLLGQRRAILLGGILMALGHFLLAL----------- 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 162 cgdgdlecnppsSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKAAFFSYFYFALNVGALFSNTILVYFEDK 241
Cdd:COG3104  106 ------------PGGVTLFYLGLALIAVGNGLFKPNISSLVGQLYDPGDPRRDAGFTIFYMGINIGAFLAPLLCGYLGEK 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 242 GLWTEGFLVSLGSAIVALVAFLAptrQYRYVKPCGNPLPRVAQVFVATARKWSVVRPGDPHELYELEGPESAIKGSRKIF 321
Cdd:COG3104  174 YGWHYGFGAAAIGMLIGLIIFLL---GRKYLGDIGLEPDNPLSKKERLIAVALGALLLVLVLAGLLSNANIANYLLYVIA 250
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 322 HSTKFLFLDRAAVITENDRNGtrsnawrlcsvtqveeakcVMKLLPIWLCTIIYSVIFTQMASLFVEQGD-VMNAYVGKF 400
Cdd:COG3104  251 IIAYFIFILRSKKLTKEERKR-------------------LLAILILFLFSIVFWALYEQAGTSLNLFADrNVDRSLFGF 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 401 HIPAASM----SVFDIFSVFVSTGIYRHIIFPYVRPTELMRMGIGLIIGIMAMVAAGLTEIQrlkrVVPGQKESeltILW 476
Cdd:COG3104  312 EIPPSWFqslnPLFIIILAPVFAALWTKLGKRGKEPSTPTKFALGLLLLGLGFLVMALAALL----AGAGGKVS---PLW 384
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 477 QIPQYVLVGASEVFMY-VGqLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSLMVNIVmaitkrgenspgwipenlNEGH 555
Cdd:COG3104  385 LVLAYLLLTIGELCLSpVG-LSMITKLAPARFAGQMMGLWFLATALGNLLAGLLAGLY------------------AVPG 445
                        490       500       510
                 ....*....|....*....|....*....|....
gi 257324001 556 MDRFYFLIAALAAIDFVVYLIFAKWYQPISHDED 589
Cdd:COG3104  446 YTAYFLLLGGIALVAGVVLLLLSPKLRRLMHGVE 479
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
80-456 5.66e-23

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 103.69  E-value: 5.66e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001   80 FFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFVSWFFLIKP 159
Cdd:TIGR00926   3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  160 rgcgdgdlecnPPSSLGVaifyLSVYLVAFGYGGHQPTLATFGADQLDDDKNS-KAAFFSYFYFALNVGALFSNTILVY- 237
Cdd:TIGR00926  83 -----------LHDLLDL----LGLALIALGTGGIKPCVSAFGGDQFEERQLSlRSRFFSFFYFAINAGSLISTIITPIl 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  238 ------FEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYVKPCGNPLPRVAQVFVATARKWSVVRPGDPHElyelegpe 311
Cdd:TIGR00926 148 rgdvgcFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEHWPL-------- 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  312 saikgsrkifhstkfLFLDRAAvitenDRNGTRsnawrlcsvtQVEEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGD 391
Cdd:TIGR00926 220 ---------------HWLDYAK-----DKHDIR----------MIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQAT 269
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  392 VMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFP-----YVRPTELMRMGIGLIIGIMAMVAAGLTE 456
Cdd:TIGR00926 270 RMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPaiakcGTRFTSLRKMAVGGLLAALSFFVAALVQ 339
PRK15462 PRK15462
dipeptide permease;
78-273 1.61e-06

dipeptide permease;


Pssm-ID: 237971 [Multi-domain]  Cd Length: 493  Bit Score: 51.10  E-value: 1.61e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  78 LAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLsfvswffli 157
Cdd:PRK15462  23 FSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL--------- 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 158 kprgcgdGDLECNPpsslgvAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKAAFFSYFYFALNVGALFSNTILVY 237
Cdd:PRK15462  94 -------GASEIHP------SFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 257324001 238 FEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYVK 273
Cdd:PRK15462 161 AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTR 196
 
Name Accession Description Interval E-value
MFS_NPF7 cd17419
NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The ...
63-580 0e+00

NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF7 includes the nitrate transporters AtNPF7.2 and AtNPF7.3, as well as the dipeptide transporter OsNPF7.3. AtNPF7.3 is a bidirectional transporter involved in nitrate influx and efflux. NPF7 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340977 [Multi-domain]  Cd Length: 447  Bit Score: 694.50  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17419    1 WKSAIFILVNQGLATLAYFGVGVNLVLYLTRVMHQSNASAANNVSNWTGTVYITPLIGAFLSDSYWGRYWTSTLFQAIFV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 143 IGVGLLSFVSWFFLIKPRGCGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD----KNSKAAFFS 218
Cdd:cd17419   81 IGLLLLTLSSALPSLRPPQCGDGDLKCPPASAAQTTFLYFSLYLIALGYGGYQPCIATLGADQFDDEdpieKASKSAFFS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 219 YFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrp 298
Cdd:cd17419  161 YFYQALNLGSLFSNTILVYFEDNGSWGLGFGISAGAAFIGLVLFLAGTPFYR---------------------------- 212
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17419  213 -----------------------------------------------------------EVKCILRLLPIWLSTIIYSVV 233
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 379 FTQMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVR--------PTELMRMGIGLIIGIMAMV 450
Cdd:cd17419  234 YTQMATLFVEQGAAMDTSFGNFKIPPASMSVFEILSVAVGTVLYRKFLVPLLRkvtghpkgITELQRMGIGLVIGILAMV 313
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 451 AAGLTEIQRLKRVVPG-----QKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYV 525
Cdd:cd17419  314 VAALVEIQRLKVARPSnlddpTSPSPLSIFWQIPQYVLVGASEVFTYVGQLEFFYDQAPDGLRSLGSALCMASVALGNYL 393
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 257324001 526 SSLMVNIVMAITKRGENsPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17419  394 SSLLVTIVNKVTTKDGS-PGWIPDNLNKGHLDRFYWLLAALSGIDFVVFLICAKW 447
MFS_NPF cd17351
Plant NRT1/PTR family (NPF) of the Major Facilitator Superfamily of transporters; The plant ...
66-580 9.49e-158

Plant NRT1/PTR family (NPF) of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340909 [Multi-domain]  Cd Length: 445  Bit Score: 459.78  E-value: 9.49e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  66 AIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGV 145
Cdd:cd17351    1 APFILGNEFAERLAFYGIAVNLVTYLTKVMHLSNAKAANTVTNFSGTSYLTPLLGAFLADAYLGRYWTIAIFSVIYLVGL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 146 GLLSFVSWFFLIKPRGCGdGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDD----DKNSKAAFFSYFY 221
Cdd:cd17351   81 ILLTLSASVPSLRPPPCN-PDSPCEPASSTQLTVLYVGLYLIALGTGGIKPCVSAFGADQFDEtdpkEKKQKPSFFNWFY 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 222 FALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrpgdp 301
Cdd:cd17351  160 FSINLGSLLAVTLVVYIQDNVSWGWGFGIPAAAMALAVIVFVAGTPFYR------------------------------- 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 302 helyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVIFTQ 381
Cdd:cd17351  209 --------------------------------------------------------EVKCLLRLLPIWATTILLSTVYAQ 232
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 382 MASLFVEQGDVMNAYVGK-FHIPAASMSVFDIFSVFVSTGIYRHIIFPYVR--------PTELMRMGIGLIIGIMAMVAA 452
Cdd:cd17351  233 MQTFFVQQGLTMDRRLGGsFEIPAASLSVFSTLFVLLFIPLYDRVFVPFARrytgnprgITPLQRIGIGLVLSILAMAVA 312
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 453 GLTEIQRLKRVV------PGQKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVS 526
Cdd:cd17351  313 ALVEVKRLRVARahglldSPTGVVPMSVFWLLPQYFLLGLAEVFTYIGQLEFFYDEAPDGMRSLGTALFLLTIALGNFLS 392
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....
gi 257324001 527 SLMVNIVMAITKRGeNSPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17351  393 SALVTIVNKITGKG-GGPGWLPNNLNKGRLDYFYWLLAVLSAVNFLVFLVCAKW 445
MFS_NPF8 cd17418
NRT1/PTR family (NPF), subfamily 8 of the Major Facilitator Superfamily of transporters; The ...
63-581 4.88e-133

NRT1/PTR family (NPF), subfamily 8 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF8 contains the Arabidopsis dipeptide transporters AtNPF8.1 (PTR1), AtNPF8.2 (PTR5), and AtNPF8.3 (PTR2), as well as tonoplast-localized transporters AtNPF8.4 (PTR4) and AtNPF8.5 (PTR6). Oryza sativa NRT1 (now called OsNPF8.9) is a low-affinity nitrate transporter. NPF8 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340976 [Multi-domain]  Cd Length: 447  Bit Score: 396.84  E-value: 4.88e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17418    1 WKACPFILGNECCERLAYYGIATNLITYLTKELHQGNVSAANNVTNWSGTCYITPLIGAFIADAYWGRYWTIASFSAIYF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 143 IGVGLLSFVSWFFLIKPRGCGDGDleCNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDD----DKNSKAAFFS 218
Cdd:cd17418   81 IGMVLLTLSASVPGLKPASCIGSL--CPPATSVQYAVFFLGLYLIALGTGGIKPCVSSFGADQFDDtdpkEKVRKSSFFN 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 219 YFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrp 298
Cdd:cd17418  159 WFYFSINIGALISSSVLVWIQENVGWGWGFGIPTVFMGIAIVSFFFGTPLYR---------------------------- 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17418  211 -----------------------------------------------------------EVKILIRLLPIWASGIVFATV 231
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 379 FTQMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP--------TELMRMGIGLIIGIMAMV 450
Cdd:cd17418  232 YSQMSTMFVQQGRTMDRMGGNFEIPPASLSLFDTLSVLIWVPIYDRFIVPLVRKftghergfTQLQRMGIGLFISVLSMV 311
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 451 AAGLTEIQRLKRV-----VPGQKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYV 525
Cdd:cd17418  312 AAAIVEIVRLQLArthnlVESGPPVPMSIFWQIPQYFLIGAAEVFTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNYL 391
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 257324001 526 SSLMVNIVMAITKRGENsPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKWY 581
Cdd:cd17418  392 SSLIVTLVTYVTTKGGK-PGWIPDNLNNGHLDYFFWLLASLSFLNILVYLWIAKRY 446
MFS_NPF5 cd17417
NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The ...
63-581 1.59e-132

NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF5 includes Arabidopsis thaliana PTR3 (AtPTR3, now named AtNPF5.2), which is a wound-induced peptide transporter that is necessary for defense against virulent bacterial pathogens. NPF5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340975 [Multi-domain]  Cd Length: 452  Bit Score: 395.48  E-value: 1.59e-132
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17417    1 WKACSFIIGIEVAERFAYYGIASNLVTYLTTPLHQSTARAAKNVNNWSGTATLLPLLGAFVADAYLGRYRTILISSLIYL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 143 IGVGLLSFvSWFflIKPRGCGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD----KNSKAAFFS 218
Cdd:cd17417   81 LGLVLLTL-SAS--LPSLKPPECNGTCSKASTLQVAFFFFSLYLVAIGQGGHKPCVQAFGADQFDEDdpkeKKQKSSFFN 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 219 YFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYvkpcgnplprvaqvfvatarkwsvvrp 298
Cdd:cd17417  158 WWYFSICAGSLTAVTVLVYIQDNVGWALGFGIPTIVMALALFVFLLGTPLYRY--------------------------- 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtQVEEAKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17417  211 --------------------------------------------------------KVEEVKLVLRLIPIWFTTLVFTVV 234
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 379 FTQMASLFVEQGDVMNAYVG-KFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP--------TELMRMGIGLIIGIMAM 449
Cdd:cd17417  235 FAQSPTFFTKQGVTMDRTIGpNFKIPPASLQSFITLSILISIPIYDRVFVPIARKitgnprgiTLLQRIGIGMFLSILAM 314
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 450 VAAGLTEIQRLKRV-----VPGQKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNY 524
Cdd:cd17417  315 VIAALVEMKRLKVAkehglISPKATVPMSIFWLLPQYILLGIADVFTMVGMQEFFYDQVPDEMRSLGTALYLSVFGVGSF 394
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 257324001 525 VSSLMVNIVMAITKRGeNSPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKWY 581
Cdd:cd17417  395 LSSFLISIVDKITSSS-GGQSWFNNNLNRAHLDYFYWLLAVLSAVNFVLFLFVAKSY 450
MFS_NPF6 cd17413
NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters; The ...
63-580 4.26e-116

NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter 1/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF6 includes the first identified member of the NRT1/PTR family: Arabidopsis thaliana NRT1.1, now called AtNPF6.3. It is a dual affinity nitrate influx transporter and a nitrate sensor. It also transports auxin and has nitrate efflux activity. NPF6 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340971 [Multi-domain]  Cd Length: 457  Bit Score: 353.68  E-value: 4.26e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17413    1 WKSAALILGIEMCERLTTLGIGVNLVTYLTGTMHLPSATSANIVTNFLGTSFLLCLLGGFIADTFLGRYLTIAIFASIQA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 143 IGVGLLSFVSWFFLIKPRGCGDGDLE-CNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDD----DKNSKAAFF 217
Cdd:cd17413   81 LGVLVLTLSTTLPSLRPPPCNHTTSHhCEPASGIQLTVLYLALYLIALGTGGIKSSVSGFGSDQFDEndpkERKLMSYFF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 218 SYFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYVKPCGNplprvaqvfvatarkwsvvr 297
Cdd:cd17413  161 NRFFFCISVGSLLAVTVLVYIQDNVGRGWGYGICAAAMVLAIVVFLAGTKRYRFKKSIGS-------------------- 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 298 pgdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvTQVEEAKCVMKLLPIWLCTIIYSV 377
Cdd:cd17413  221 --------------------------------------------------------TQVEEVKMVVRMLPIWATTILFWT 244
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 378 IFTQMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP--------TELMRMGIGLIIGIMAM 449
Cdd:cd17413  245 VYAQMTTFSVEQAETMDRNIGSFEIPPASMAVFLVATILLTTAVYDRVIVPLCRKltghpqglTTLQRIGVGLVFSCLAM 324
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 450 VAAGLTEIQRLKRVV---PGQKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVS 526
Cdd:cd17413  325 AVAALVELKRLRIAHahgKPVKTVPMSVFWLVPQYFLVGAGEAFIYTGQLDFFIRESPKGMKSMSTGLFLSTLSLGFFVS 404
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....
gi 257324001 527 SLMVNIVMAITKRGeNSPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17413  405 SFLVSIVNRVTGKS-HPHGWLADNLNKGRLDYFYWLLAVLSALNFVIFLVFAKW 457
MFS_NPF1_2 cd17416
NRT1/PTR family (NPF), subfamily 1 and 2 of the Major Facilitator Superfamily of transporters; ...
69-581 4.51e-106

NRT1/PTR family (NPF), subfamily 1 and 2 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF1 includes Medicago truncatula LATD/NIP, now named MtNPF1.7, which is a high-affinity nitrate transporter and is involved in nodulation and root architecture. NPF2 members are well-established nitrate and glucosinolate transporters, including Arabidopsis nitrate influx and efflux transporters with varied tissue and developmental specificity. Examples are AtNPF2.7, which is expressed in the cortex of mature roots, and AtNPF2.9, which is expressed in root companion cells where it is involved in phloem loading. NPF1/2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340974 [Multi-domain]  Cd Length: 444  Bit Score: 327.30  E-value: 4.51e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  69 LLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLL 148
Cdd:cd17416    4 IIGNETGEKLASYGLLANLIVYLIEEYNMKSIAAANIINIWSGTTNFLPVVGAFLSDSYFGRFPTISVGSFASLLGMVLL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 149 SFVSWFFLIKPRGCGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSK----AAFFSYFYFAL 224
Cdd:cd17416   84 TLTAAIPSLRPPPCETASSLCQSPSKLQLAVLYSALALLSIGAGGIRPCSLAFGADQFDKKTESGkrglESFFNWYYFTF 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 225 NVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrpgdphel 304
Cdd:cd17416  164 TVAQIISLTAIVYIQDNVSWKIGFGIPAALMLLSFILFLAGSRLYV---------------------------------- 209
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 305 yelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqVEEAKCVMKLLPIWLCTIIYSVIFTQMAS 384
Cdd:cd17416  210 ---------------------------------------------------VEDLKSLIRVIPIWSTGIILSLAMAQQMS 238
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 385 LFVEQGDVMNAYVG-KFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVR--------PTELMRMGIGLIIGIMAMVAAGLT 455
Cdd:cd17416  239 LTVLQALVMDRHLGpSFQIPAGSITVFLLITLTIFIPLYDRVLVPLLRkitgrgrgLTLLQRVGIGIVFSILSMAVAAIV 318
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 456 EIQRLKRVV-PGQKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSLMVNIVM 534
Cdd:cd17416  319 ERKRRKTALtQGNGTSPMSVLWLVPQLVLMGIAEAFHFIGQIEFFYQEFPESMRSTATSLFSLGMGVASYLSSALISAVH 398
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*..
gi 257324001 535 AITKRGENsPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKWY 581
Cdd:cd17416  399 RTTGRGGG-GSWLPDDINKGRLDYVYWLLAGLGALNLGYFLVCSWRY 444
MFS_NPF4 cd17414
NRT1/PTR family (NPF), subfamily 4 of the Major Facilitator Superfamily of transporters; The ...
66-580 2.23e-92

NRT1/PTR family (NPF), subfamily 4 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. Members of the NPF4 subfamily have been shown to transport ABA. NPF4 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340972 [Multi-domain]  Cd Length: 456  Bit Score: 292.01  E-value: 2.23e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  66 AIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGV 145
Cdd:cd17414    4 AFFVLVVEALENMAYLANANNLVTYLINNMHYSLAKSANIVTNFVGTAFLLALLGGFLSDSFLSSFKTIIIFGSIELLGL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 146 GLLSFVSWFFLIKPRGCG-DGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD----KNSKAAFFSYF 220
Cdd:cd17414   84 ILLTVQAHIPSLQPPSCNsLGDLTCKEPSGSQAAILFVGLYLVALGVGCIKPNLPSHGADQFDENdpkgRRQLSSFFNWY 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 221 YFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrpgd 300
Cdd:cd17414  164 YFSFSLGALIAVTLVVWVEENKGWDWGFGVSAAVIAVGILVFVAGTPFYR------------------------------ 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 301 phelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcSVTQVEEAKCVMKLLPIWLCTIIYSVIFT 380
Cdd:cd17414  214 ---------------------------------------------------NKTQVEEVKIVLKMLPIFACTIILNCILA 242
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 381 QMASLFVEQGDVMNAYVGK-FHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP--------TELMRMGIGLIIGIMAMVA 451
Cdd:cd17414  243 QLQTFSVQQGSTMNRTKIGsFNIPPASLQAIPVIFMLILVPLYDHLLVPFARKitghesgiTHLQRIGIGLVLSTLSMVV 322
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 452 AGLTEIQRLKRVVP-GQKESE----LTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVS 526
Cdd:cd17414  323 AALVETKRKKVAVEnGLLNSKenlpISIFWIALQFLILGISDMFTAVGLLEFFYTESPSSMRSLGTALTWCSYSFGFYLS 402
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....
gi 257324001 527 SLMVNIVMAITKRGENSPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17414  403 SVLVSVVNKVTGSGGHGGWLLGENLNRDRLDLFYWLLCVLSTINFLNYLFWARR 456
MFS_NPF3 cd17415
NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters; The ...
63-580 1.89e-85

NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF3 is the smallest NPF subfamily and it includes Cucumis sativus nitrite transporter (CsNitr1), now named CsNPF3.2. It functions as a chloroplast nitrite uptake transporter to remove toxic nitrite from the cytosol. NPF3 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340973 [Multi-domain]  Cd Length: 448  Bit Score: 273.94  E-value: 1.89e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17415    1 WKTMPFIFGNEICERLASVGFHTNLITYLTLQLHMPLVKAANILTNFNGTASLTPLLGAFIADSFAGRFWTITIGSIIYQ 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 143 IGVGLLSFVSWFFLIKPRGCGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD----KNSKAAFFS 218
Cdd:cd17415   81 LGMVLLTISAILPSLRPPPCNGHEVCACQASSAQLSILYLSLLLTALGSGGIRPCVVAFGADQFDESdpkqAKQTWNFFN 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 219 YFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAptrqyryvkpcGNPLPRvaqvfvatarkwsvvrp 298
Cdd:cd17415  161 WYYFCMGIAILLAVTVIVYIQDNVGWGWGFGIPTIAMAISVIAFVV-----------GSPLYR----------------- 212
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17415  213 -----------------------------------------------------------ELKSIIRMLPIWAAGILLVTA 233
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 379 FTQMASLFVEQGDVMNAYVGK-FHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP--------TELMRMGIGLIIGIMAM 449
Cdd:cd17415  234 SSQQHTFSIQQARTMNRHLTPsFQIPPASMSVFGILSLLTTVPLYDRVLMPVARKftgnergiTFLQRMGIGLFISILAT 313
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 450 VAAGLTEIQRLK------------RVVPgqkeseLTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMA 517
Cdd:cd17415  314 VVAAFVEVKRKSvaanhglldrphATVP------ISVFWLVPQYILHGIAEAFMSIGHLEFFYDQSPESMRSTATALFWS 387
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 257324001 518 SMALGNYVSSLMVNIVMAITKRGENSpgWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17415  388 TISLGSYLSTLLVTLVHKETSRGGRW--WLPNNLNRGRLDYFYWLVAVLQAVNLVYFLICARW 448
PTR2 pfam00854
POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton ...
173-547 2.27e-81

POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.


Pssm-ID: 425909 [Multi-domain]  Cd Length: 392  Bit Score: 261.48  E-value: 2.27e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  173 SSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDD-DKNSKAAFFSYFYFALNVGALFSNTILVYFEDKGLWTEGFLVS 251
Cdd:pfam00854  28 PPVHVALFFIGLALIALGTGGIKPNVSSFGGDQFEEtDPRRRSRFFSIFYFSINAGSLISTIITPYLQQNYGYPLGFGLP 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  252 LGSAIVALVAFLAPTRQYRYVKPCGNPLPRVAQV-FVATARKWSVVRpgdphelyelegpesAIKGSRKIFHSTKFLFLD 330
Cdd:pfam00854 108 AVGMIIALLVFLLGSRMYKKKPPKGNVLTKVFKVlPVAAWNKVKLNG---------------SSAGIKKLHWLDWARELD 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  331 RAAVITENdRNGTRSNAWrlCSVTQVEEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGDVMNAYVGKFHIPAASMSVF 410
Cdd:pfam00854 173 ALIILGIV-VPGIFFNIW--CTKTKVEEVKRLLRVLPLFLPLIMFWALYDQMGTSWVLQARTMNRKIGSFEIPPAQFQAF 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  411 DIFSVFVSTGIYRHIIFPYVR-----PTELMRMGIGLIIGIMAMVAAGLTEIQRLK--RVVPGQKESELTILWQIPQYVL 483
Cdd:pfam00854 250 NAILVLIFIPIFDRLVYPLGRkctggLTPLQKMAVGLFLASLAFAIAAIVQLKRNDtgPEFPIAQEVPISVLWLIPQYLL 329
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 257324001  484 VGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSLMVNIVMAITKRGENSpGWI 547
Cdd:pfam00854 330 IGFGELFISIGGLEFFYKLAPKSMTSLITGLFLLTNALGNFLSGVIATLTAKPTNVLGAY-GWL 392
MFS_POT cd06175
Proton-coupled oligopeptide transporter (POT) family of the Major Facilitator Superfamily of ...
78-580 5.17e-63

Proton-coupled oligopeptide transporter (POT) family of the Major Facilitator Superfamily of transporters; The Proton-coupled oligopeptide transporter (POT) family is present across all major kingdoms of life and is known by a variety of names. It is referred to as the Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) in plants, and in addition to POT, it is also known as the Peptide transporter (PepT/PTR) or Solute Carrier 15 (SLC15) family in animals. Members of this family are proton-driven symporters involved in nitrogen acquisition in the form of di- and tripeptides. Plant members transport other nitrogenous ligands including nitrate, the plant hormone auxin, and glucosinolate compounds that are important for seed defense. POT proteins exhibit substrate multispecificity, with one transporter able to recognize as many as 8,400 types of di/tripeptides and certain peptide-like drugs. The POT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340865 [Multi-domain]  Cd Length: 422  Bit Score: 213.84  E-value: 5.17e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  78 LAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFVSWFFLI 157
Cdd:cd06175   13 FTFYGIGANLVPFLTGALGLGNAQAANVVLNFLGTSYVTPLFGGWIADTFLGRYRTILIGAAIYAVGVAILTVSTIPPGL 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 158 KPRGCGDGdlECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKA-AFFSYFYFALNVGALFSNTILV 236
Cdd:cd06175   93 RPLRCNPS--HCEQASGIQLTGFYAALYLIALGTGGVKANVSPLGADQFDERGPSKTqSFFNWFYFCINVGSLLAMLGTP 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 237 YFEDKGLWTEGFLVSLGSAIVALVAFlaptrqyryvkpcgnplprvaqvfvatarkwsvvrpgdphelyelegpesaikg 316
Cdd:cd06175  171 YIQDNVGWAAAYGIPFVAILLALVVF------------------------------------------------------ 196
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 317 srkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGDVMNAY 396
Cdd:cd06175  197 -----------------------------------------EVKQLLRALPLFAFCILFWTVYAQMTTSYVLQALTLVRS 235
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 397 VGKFHIPAASMSVFDIFSVFVSTGIYRHIIFP-----YVRPTELMRMGIGLIIGIMAMVAAGLTEIQRLKRV---VPGQK 468
Cdd:cd06175  236 TGLFTIPPASMQAFNPILLLLLIPVLDKVVYPlirryGVGLSPLTKIGLGFFFGSLSMFVAGFLELKRLNTAhahGPVVT 315
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 469 ESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSLMVNIVMAITKRgenspGWIP 548
Cdd:cd06175  316 TSPLSFWWQIPQYLLLGIGEILVSITGLEFAYREAPKSMKGFIMGLLLLTSGFGSFFGSVLVTLVSKPTDG-----AHIA 390
                        490       500       510
                 ....*....|....*....|....*....|..
gi 257324001 549 ENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd06175  391 DDLNKGVLTNFFFLLAVLAALNFLIFLLVSRK 422
MFS_SLC15A1_2_like cd17347
Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily ...
69-586 1.23e-44

Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily transporters; Solute carrier family 15 member 1 (SLC15A1) and SLC15A2 are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1, or peptide transporter 1 (PepT1), is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. SLC15A2, or peptide transporter 2 (PepT2), is abundantly expressed in the apical membrane of kidney proximal tubules and is also referred to as the renal isoform. Both proteins transport di/tripeptides, but not tetrapeptides or free amino acids, using the energy generated by an inwardly directed transmembrane proton gradient. The SLC15A1/SLC15A2-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340905 [Multi-domain]  Cd Length: 427  Bit Score: 164.33  E-value: 1.23e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  69 LLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLL 148
Cdd:cd17347    7 IVGNEFCERFSYYGMRAILVLYLTDFLGFSEAEATAIYHSFVMLCYFFPLLGAIIADSYLGKYRTILYLSLVYCLGHIVL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 149 SFVSwfflIKPRGcgdgdlecnPPSSLGVAIfylSVYLVAFGYGGHQPTLATFGADQLD-DDKNSKAAFFSYFYFALNVG 227
Cdd:cd17347   87 AVTA----IPPLG---------PPHVWGLLI---GLLLIAIGTGGIKPCVSAFGGDQFGaDQQHLLARFFSWFYFAINAG 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 228 ALFSNTILVYFEDkglwtegfLVSLGSAIVALVAFLAPTrqyryvkpcgnplprvAQVFVATArkwsvvrpgdphelyel 307
Cdd:cd17347  151 SLLSTFLTPILRA--------DVQFGGHDCYPLAFGVPG----------------VLMAVATL----------------- 189
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 308 egpesaikgsrkIFHSTKFLFLDRaavitendrngtrsnawrlcsvtqveeaKCVMKLLPIWLCTIIYSVIFTQMASLFV 387
Cdd:cd17347  190 ------------VFWLGRKHYKDV----------------------------KALLRVLVLFIPLPVFWALFDQQGSRWT 229
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 388 EQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFP-----YVRPTELMRMGIGLIIGIMAMVAAGLTEIqRLKR 462
Cdd:cd17347  230 LQAEQMDGLVGGFTILPDQMQALNPILILILIPLFDYVIYPllercGIPLTPLRKMGVGMILAALAFVIAGFLQL-RIDG 308
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 463 VVPGQ------------KESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYvsslmv 530
Cdd:cd17347  309 GLPGQpdpgevttfediEPNSVSILWQLPQYVVLTAGEVLFSITGLEFAYTQAPKSMKSVVQAAWLLTVALGNL------ 382
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 257324001 531 nIVMAITKRGENSPGWipenlneghmdRFYFLIAALAAIDFVVYLIFAKWYQPISH 586
Cdd:cd17347  383 -IVVIVAELIQFSSQA-----------AEYFFFAGLMLVVAVVFALLARFYKYVTY 426
MFS_SLC15A3_4 cd17348
Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; ...
66-578 2.96e-33

Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 members 3 (SLC15A3) and 4 (SLC15A4) are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They are peptide/histidine transporters (PHTs) that transport free histidine in addition to di/tripeptides. SLC15A4, also called peptide transporter 4 or peptide/histidine transporter 1 (PHT1), is expressed in the human brain, retina, placenta, and immune cells. It is required for Toll-like receptor 7 (TLR7)- and TLR9-mediated type I interferon production in plasmacytoid dendritic cells (pDCs) and is involved in the pathogenesis of lupus-like autoimmunity. SLC15A3, also called osteoclast transporter, peptide transporter 3, or peptide/histidine transporter 2 (PHT2), is expressed in immune tissues including the spleen and thymus. The SLC15A3/SLC15A4 group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340906 [Multi-domain]  Cd Length: 435  Bit Score: 132.22  E-value: 2.96e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  66 AIILLVnQGLATLAFFGVGVNLVLFLT-RVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIG 144
Cdd:cd17348    5 AAVLLV-ELLERAAFYGITSNLVLFLNgSPFNWEGTQASQALLLFMGATYLLSPFGGWLADAYLGRFWTILLSLLLYLLG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 145 VGLLSFVSWfflikprgcgdgdlecnppsslgvAIFYLSVYLVAFGYGGHQPTLATFGADQLDD-DKNSKAAFFSYFYFA 223
Cdd:cd17348   84 MLLFPATAA------------------------PALYAGLLLVGLGVGSVKANITPFGADQVKDrGPEATRRFFNWFYWS 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 224 LNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLaptrqyryvkpCGNPlprvaqVFVatarkwsvvrpgdphe 303
Cdd:cd17348  140 INLGAILSLGGVAYIQQNVSFLIGYSIPAVCVGLAFLVFL-----------CGQP------VFI---------------- 186
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 304 lyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVIFTQMA 383
Cdd:cd17348  187 ------------------------------------------------------DVKALVKILPVFLALIPYWTVYFQMQ 212
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 384 SLFVEQG-----------DVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVR-----PTELMRMGIGLIIGIM 447
Cdd:cd17348  213 TTYVLQSlhlkipnifisNIAGITNSSHTFPAAWLTMFDAVLILILIPLKDKLVDPFLKrrgllPSSLKRIAVGMFFVMC 292
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 448 AMVAAGLTEIQRLKRVVPGQKESE-----------LTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCM 516
Cdd:cd17348  293 SAIAAGILESKRLEIVKHNTTIQQqignvtyyaadLPIWWQIPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFF 372
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 257324001 517 ASMALGNYVSSLMVNIVmAITKRGENSPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFA 578
Cdd:cd17348  373 FFSGVGSFVGSGLLALV-SIKEIGWMSSHKDFGNINGCRLNYYFFLLAGIQGVTLLLFLIIS 433
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
87-589 3.60e-26

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 112.22  E-value: 3.60e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  87 LVLFLTR-----VMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFvswfflikprg 161
Cdd:COG3104   37 LVLYLTAsladgGLGLSEADAAAIYGAYTALVYLTPLLGGWLADRLLGQRRAILLGGILMALGHFLLAL----------- 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 162 cgdgdlecnppsSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKAAFFSYFYFALNVGALFSNTILVYFEDK 241
Cdd:COG3104  106 ------------PGGVTLFYLGLALIAVGNGLFKPNISSLVGQLYDPGDPRRDAGFTIFYMGINIGAFLAPLLCGYLGEK 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 242 GLWTEGFLVSLGSAIVALVAFLAptrQYRYVKPCGNPLPRVAQVFVATARKWSVVRPGDPHELYELEGPESAIKGSRKIF 321
Cdd:COG3104  174 YGWHYGFGAAAIGMLIGLIIFLL---GRKYLGDIGLEPDNPLSKKERLIAVALGALLLVLVLAGLLSNANIANYLLYVIA 250
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 322 HSTKFLFLDRAAVITENDRNGtrsnawrlcsvtqveeakcVMKLLPIWLCTIIYSVIFTQMASLFVEQGD-VMNAYVGKF 400
Cdd:COG3104  251 IIAYFIFILRSKKLTKEERKR-------------------LLAILILFLFSIVFWALYEQAGTSLNLFADrNVDRSLFGF 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 401 HIPAASM----SVFDIFSVFVSTGIYRHIIFPYVRPTELMRMGIGLIIGIMAMVAAGLTEIQrlkrVVPGQKESeltILW 476
Cdd:COG3104  312 EIPPSWFqslnPLFIIILAPVFAALWTKLGKRGKEPSTPTKFALGLLLLGLGFLVMALAALL----AGAGGKVS---PLW 384
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 477 QIPQYVLVGASEVFMY-VGqLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSLMVNIVmaitkrgenspgwipenlNEGH 555
Cdd:COG3104  385 LVLAYLLLTIGELCLSpVG-LSMITKLAPARFAGQMMGLWFLATALGNLLAGLLAGLY------------------AVPG 445
                        490       500       510
                 ....*....|....*....|....*....|....
gi 257324001 556 MDRFYFLIAALAAIDFVVYLIFAKWYQPISHDED 589
Cdd:COG3104  446 YTAYFLLLGGIALVAGVVLLLLSPKLRRLMHGVE 479
MFS_SLC15A1 cd17412
Solute Carrier family 15 member 1 of the Major Facilitator Superfamily of transporters; Solute ...
69-588 9.67e-24

Solute Carrier family 15 member 1 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 1 (SLC15A1), also called peptide transporter 1 (PepT1), is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. SLC15A1, as well as SLC15A2, mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1 is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. It is a high-capacity/low-affinity transporter that drives the transport of di-and tripeptides for metabolic purposes. It's expression is upregulated in the colon during chronic inflammation associated with inflammatory bowel disease. SLC15A1/PepT1 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340970 [Multi-domain]  Cd Length: 415  Bit Score: 104.15  E-value: 9.67e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  69 LLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLL 148
Cdd:cd17412    7 IVVNEFCERFSYYGMRAVLVLYFKYFLRWDDDLSTAIYHTFVALCYLTPILGAIIADSWLGKFKTIVYLSIVYTIGQAVM 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 149 SFVSWFFLIkprgcgDGDLECNPPS-SLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDK-NSKAAFFSYFYFALNV 226
Cdd:cd17412   87 AVSAIHDLT------DANRDGTPDNlTLHVALSMIGLLLIALGTGGIKPCVAAFGGDQFEEHQeKQRSRFFSIFYLSINA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 227 GALFSNTI--LVYFEDKGLWTE------GFLVSLGSAIVALVAFLAPTRQYRYVkpcgnplprvaqvfvatarkwsvvrp 298
Cdd:cd17412  161 GSLLSTIItpILRSQECGIHSKqkcyplAFGVPAALMVVALIVFILGSKMYKQI-------------------------- 214
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveeaKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17412  215 -------------------------------------------------------------KMVLKVLFLYIPLPMFWAL 233
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 379 FTQMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP-----TELMRMGIGLIIGIMAMVAAG 453
Cdd:cd17412  234 FDQQGSRWTLQATTMDGNFGAIQIQPDQMQTVNPILIIIMVPIFDAVIYPLIKKckinfTPLRKMTVGMFLAALAFVAAA 313
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 454 LTEIQrlkrvvpgqkeseltILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYvsslmvnIV 533
Cdd:cd17412  314 LLQIQ---------------MAWQIPQYFLLTCGEVVFSVTGLEFSYSQAPSNMKSVLQAGWLLTVAVGNI-------IV 371
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 257324001 534 MAITKRGENSPGWIPenlneghmdrfYFLIAALAAIDFVVYLIFAKWYQPISHDE 588
Cdd:cd17412  372 LIVAEAGSISEQWAE-----------YVLFAALLVAVCIIFAIMAYFYTYVDPAE 415
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
80-456 5.66e-23

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 103.69  E-value: 5.66e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001   80 FFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFVSWFFLIKP 159
Cdd:TIGR00926   3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  160 rgcgdgdlecnPPSSLGVaifyLSVYLVAFGYGGHQPTLATFGADQLDDDKNS-KAAFFSYFYFALNVGALFSNTILVY- 237
Cdd:TIGR00926  83 -----------LHDLLDL----LGLALIALGTGGIKPCVSAFGGDQFEERQLSlRSRFFSFFYFAINAGSLISTIITPIl 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  238 ------FEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYVKPCGNPLPRVAQVFVATARKWSVVRPGDPHElyelegpe 311
Cdd:TIGR00926 148 rgdvgcFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEHWPL-------- 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  312 saikgsrkifhstkfLFLDRAAvitenDRNGTRsnawrlcsvtQVEEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGD 391
Cdd:TIGR00926 220 ---------------HWLDYAK-----DKHDIR----------MIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQAT 269
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  392 VMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFP-----YVRPTELMRMGIGLIIGIMAMVAAGLTE 456
Cdd:TIGR00926 270 RMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPaiakcGTRFTSLRKMAVGGLLAALSFFVAALVQ 339
MFS_SLC15A2 cd17411
Solute carrier family 15 member 2 of the Major Facilitator Superfamily of transporters; Solute ...
69-525 1.25e-16

Solute carrier family 15 member 2 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 2 (SLC15A2), also called peptide transporter 2 (PepT2), is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. SLC15A2, as well as SLC15A1, mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A2 is a high-affinity transporter and is abundantly expressed in the apical membrane of kidney proximal tubules and choroid plexus epithelial cells. It is the major transporter involved in the reclamation of peptide-bound amino acids and peptide-like drugs in the kidney, and is also called the renal isoform. In choroid plexus and the brain, it acts as an efflux transporter and plays a role in regulating peptide/neuropeptide homeostasis. SLC15A2/PepT2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340969 [Multi-domain]  Cd Length: 403  Bit Score: 82.18  E-value: 1.25e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  69 LLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGvgll 148
Cdd:cd17411    7 IVVNEFCERFSYYGMKAVLTLYFLSFLHWDENLSTAIYHAFSGLCYFTPVLGALIADSWLGKFKTIIYLSIVYVVG---- 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 149 sfvswfFLIKPRGCgdgdLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNS-KAAFFSYFYFALNVG 227
Cdd:cd17411   83 ------HVIKSVGA----IPTVGDQQVHVVLSMIGLFLIALGTGGIKPCVAAFGGDQFEEEHAReRSKFFSIFYLSINAG 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 228 ALFSNTIL------VYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrpgdp 301
Cdd:cd17411  153 SLISTFVTpilrgdVQCFGGDCYALAFGVPAALMVVALVVFIAGSGMYK------------------------------- 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 302 helyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVIFTQ 381
Cdd:cd17411  202 --------------------------------------------------------EVKMVTRVLFLYIPLPMFWALFDQ 225
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 382 MASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP-----TELMRMGIGLIIGIMAMVAAGLTE 456
Cdd:cd17411  226 QGSRWTLQATRMNDFGGGFVLQPDQMQTLNPLLILVFIPIFDLGIYPLVSKckinfTSLRKMATGMILAALAFAVAAAVE 305
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 257324001 457 IQrlkrvvpgqkeseltILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYV 525
Cdd:cd17411  306 IK---------------IAWQLPQYVLLSAGEVMFSITGLEFSYSQAPASMKSVLQAGWLLTVAFGNVI 359
MFS_PTR2 cd17350
Peptide transporter PTR2 of the Major Facilitator Superfamily of transporters; Fungal peptide ...
114-526 8.41e-16

Peptide transporter PTR2 of the Major Facilitator Superfamily of transporters; Fungal peptide transporter or permease PTR2 is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. It is a 12-transmembrane domain (TMD) integral membrane protein that translocates di-/tripeptides. As with other POT family proteins, it displays characteristic substrate multispecificity. PTR2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340908 [Multi-domain]  Cd Length: 438  Bit Score: 79.82  E-value: 8.41e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 114 YMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFVSWfflikprgcgdgdlecnpPSSL----GVAIFYLSVYLVAF 189
Cdd:cd17350   60 YVTPVIGAYVADQFLGRYNTIVCGAVIYFVGILILTCTSI------------------PSVIdagaGLGGFVVAIIIIGL 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 190 GYGGHQPTLATFGADQLD-----------------DDKNSKAAFFSYFYFALNVGAlFSNTILVYFE-DKGLWTeGFLVS 251
Cdd:cd17350  122 GTGGIKSNVSPLIADQLPkikpyvktlkngervivDPVVTLSRIYMIFYWAINVGS-LSLLATTYLErTKGFWY-AYLLP 199
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 252 LGSAIVALVaflaptrqyryvkpcgnplprvaqvFVATARKWSVVRPGdphelyelegpesaikgsrkifhstkfLFLDr 331
Cdd:cd17350  200 LCVFVIPLI-------------------------ILAFGKKFYKIRPD---------------------------LFID- 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 332 aavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGDVMNAYvgkfHIPAASMSVFD 411
Cdd:cd17350  227 --------------------------ELKRALRACKVFLFYPIYWVCYGQMTSNFISQAGQMQLH----GVPNDLFQAFD 276
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 412 IFSVFVSTGIYRHIIFPYVRPTE-----LMRMGIGLIIGIMAMVAAGLTEIQRLKRVVPGQK------ESELTILWQIPQ 480
Cdd:cd17350  277 SIALIIFIPILENIIYPLLRKYNipfkpITRITLGFMFASFSMIYAAVLQAKIYQAGPCYANptgtcsPNDIHVWIQIPA 356
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*.
gi 257324001 481 YVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVS 526
Cdd:cd17350  357 YVLIAFSEIFASITGLEYAYTKAPPSMKSFITALFLLTNAFGAALS 402
MFS_DtpA_like cd17346
Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily ...
79-269 2.01e-15

Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters; The DtpA-like subfamily includes four Escherichia coli proteins: dipeptide and tripeptide permeases A (DtpA, TppB or YdgR), B (DtpB or YhiP), C (DtpC or YjdL), and D (DtpD or YbgH). They are proton-dependent permeases that transport di- and tripeptides. DtpA and DtpB display a preference for di- and tripeptides composed of L-amino acids. DtpC shows higher specificity for dipeptides compared to tripeptides, and prefers dipeptides containing a C-terminal lysine residue. The DtpA-like subfamily belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340904 [Multi-domain]  Cd Length: 399  Bit Score: 78.39  E-value: 2.01e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  79 AFFGVGVNLVLFLTRVMGQGN--AEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFvswffl 156
Cdd:cd17346   17 SYYGMRAILILYLTAQLGDGFseADAASIYGAYTALVYLTPIIGGWLADKVLGARRTVFIGGILMALGYLLLAL------ 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 157 ikprgcgdgdlecnppSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKAAFFSYFYFALNVGALFSNTILV 236
Cdd:cd17346   91 ----------------SPFSVSMLYLGLALIIVGNGLFKPNISSLVGKLYDENDPRRDSGFSIFYMGINLGAFLAPLLCG 154
                        170       180       190
                 ....*....|....*....|....*....|...
gi 257324001 237 YFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQY 269
Cdd:cd17346  155 TLGDNYGYHYGFGLAAVGMLLGLLIFLLGRKKL 187
MFS_SLC15A5 cd17349
Solute Carrier family 15 member 5 of the Major Facilitator Superfamily of transporters; Solute ...
66-566 1.39e-11

Solute Carrier family 15 member 5 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 5 (SLC15A5) is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. The specific function of SLC15A5 is unknown. SLC15A5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340907 [Multi-domain]  Cd Length: 437  Bit Score: 66.70  E-value: 1.39e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  66 AIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGV 145
Cdd:cd17349    4 VICLLLVELCERFTFFGIVCNMILFCTIKLGYRNHQAAIVNLCFVGTSTLTPVFVGWLAEECMGRNKLVYICLFLHFLGT 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 146 GLLSFVSW----FFLikprgcGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKA-AFFSYF 220
Cdd:cd17349   84 ALLPVVAFpfedFYI------DTHHIIHTLAKREQTLLFYVALLTASLGTGGIRAIVCPLSAYGLQDYGSRKLmSFFNWF 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 221 YFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAflaptrqyryvkpcgnplprvaqvfvatarkwsvvrpgd 300
Cdd:cd17349  158 YWLVNLNSAVVFVGISYIQQSVAKNLGFLIPFMSVLMALIT--------------------------------------- 198
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 301 phelyelegpesaikgsrkifhstkfLFLDRAAVItendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVIFT 380
Cdd:cd17349  199 --------------------------LHMVRNDLI----------------------NTKNLVRLFPLFAFQILYRTCIM 230
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 381 QMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHI---IFPYVR--PTELMRMGIGLIIGIMAMVAAGLT 455
Cdd:cd17349  231 QIPSGYYLQTMNSNLNLGGFLLPIAAMNVISIIPLLILAPFLEYFsscLFSSKRygPFLSACIIAGHLCAALSVMVAGFS 310
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 456 EIQRLKRVVPGQKESELTILWQ-------IPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSL 528
Cdd:cd17349  311 EIHRKRFPLVEQTLSGKVLLVSsmpcfqlAPQYVLLGVAEALVTPACSLITFRLVPSSIRGISMHFLTLFNGAGCFMGAL 390
                        490       500       510
                 ....*....|....*....|....*....|....*...
gi 257324001 529 MVNIVMAITKrgensPGWIPENLNEGHMDRFYFLIAAL 566
Cdd:cd17349  391 LIQLVYLISE-----GNWFPNTLNKGNLERFFFFLASL 423
PRK15462 PRK15462
dipeptide permease;
78-273 1.61e-06

dipeptide permease;


Pssm-ID: 237971 [Multi-domain]  Cd Length: 493  Bit Score: 51.10  E-value: 1.61e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  78 LAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLsfvswffli 157
Cdd:PRK15462  23 FSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL--------- 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 158 kprgcgdGDLECNPpsslgvAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKAAFFSYFYFALNVGALFSNTILVY 237
Cdd:PRK15462  94 -------GASEIHP------SFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 257324001 238 FEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYVK 273
Cdd:PRK15462 161 AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTR 196
yjdL_sub1_fam TIGR00924
amino acid/peptide transporter (Peptide:H+ symporter), bacterial; The model describes ...
79-280 1.91e-05

amino acid/peptide transporter (Peptide:H+ symporter), bacterial; The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273342 [Multi-domain]  Cd Length: 475  Bit Score: 47.52  E-value: 1.91e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001   79 AFFGVGVNLVLFL--TRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFvswffl 156
Cdd:TIGR00924  25 SYYGMQGILAVYLvqQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAM------ 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  157 ikprgcgdgdlecnppsSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLD-DDKNSKAAFFSYFYFALNVGALFSNTIL 235
Cdd:TIGR00924  99 -----------------SIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYErGDMPRRDGGFTLFYMSINIGSFISPLLA 161
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 257324001  236 VYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYVKPCGNPLP 280
Cdd:TIGR00924 162 GVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLS 206
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
75-263 6.22e-05

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 45.63  E-value: 6.22e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  75 LATLAFFGVGVNLVLFLTRVMGQGNAEAANnvskWTGTVYMFSLVGAF----LSDsYWGRYLTCTIfqVIFVIGVGLLSF 150
Cdd:COG2271  191 LVYFALYGFLTWLPTYLVEVRGLSLAQAGL----LLSLPFLAGIVGSLlggwLSD-RLGRRRKLVL--AIGLLLAALALL 263
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 151 VSWFFlikprgcgdgdlecnppSSLGVAIFYLSvyLVAFGYGGHQPTLATFGADQLDddKNSKAAFFSYFYFALNVGALF 230
Cdd:COG2271  264 LLALL-----------------PSPALAIALLF--LAGFGLGGAFGLLWALAAELFP--KKARGTASGLVNTFGFLGGAL 322
                        170       180       190
                 ....*....|....*....|....*....|...
gi 257324001 231 SNTILVYFEDKGLWTEGFLVSLGSAIVALVAFL 263
Cdd:COG2271  323 GPLLVGYLLDATGYQAAFLLLAALALLAALLAL 355
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
67-264 2.43e-04

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 43.74  E-value: 2.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  67 IILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDsYWGRYLTCTIFQVIFVIGVG 146
Cdd:COG2211  231 LLLLLAYLLFFLALALVAALLLYYFKYVLGLSAALVGLLLALYFLAALLGAPLWPRLAK-RFGKKKAFIIGLLLAALGLL 309
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 147 LLSFVswfflikprgcgdgdlecnPPSSlgVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD-----KNSKAAFFSYFY 221
Cdd:COG2211  310 LLFFL-------------------GPGN--LWLLLVLAALAGIGLGAILVLPWAMLADVVDYDewktgRRREGLYFGIFT 368
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 257324001 222 FALNVGALFSNT----ILVYF--------EDKGLWTEGFLVSLGSAIVALVAFLA 264
Cdd:COG2211  369 FAIKLGQALAGAlaglLLALFgyvagaaqSPSALTGIRLLFFLLPAVLLLLAALL 423
tppB PRK09584
dipeptide/tripeptide permease DtpA;
80-263 1.55e-03

dipeptide/tripeptide permease DtpA;


Pssm-ID: 181969  Cd Length: 500  Bit Score: 41.28  E-value: 1.55e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  80 FFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFvswfflikp 159
Cdd:PRK09584  37 YYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAW--------- 107
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 160 rgcgdgdlecnppSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKAAFFSYFYFALNVGALFSNTILVYFE 239
Cdd:PRK09584 108 -------------SGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA 174
                        170       180
                 ....*....|....*....|....
gi 257324001 240 DKGLWTEGFLVSLGSAIVALVAFL 263
Cdd:PRK09584 175 AKYGWSVAFALSVVGMLITVVNFA 198
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
67-228 1.57e-03

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 41.11  E-value: 1.57e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  67 IILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDsYWGRYLTCTIFQVIFVIGVG 146
Cdd:COG2814  210 LLLLLLAFLLGFGFFALFTYLPLYLQEVLGLSASAAGLLLALFGLGGVLGALLAGRLAD-RFGRRRLLLIGLLLLALGLL 288
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 147 LLSFVSWFFLikprgcgdgdlecnppsslgvaiFYLSVYLVAFGYGGHQPTLATFGADQLDDDknSKAAFFSYFYFALNV 226
Cdd:COG2814  289 LLALAGSLWL-----------------------LLLALFLLGFGFGLLFPLLQALVAELAPPE--ARGRASGLYNSAFFL 343

                 ..
gi 257324001 227 GA 228
Cdd:COG2814  344 GG 345
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
67-229 2.34e-03

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 40.67  E-value: 2.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001  67 IILLVNQGLATLAFFGVGVNLVLFLTRVMGQGnaeaannvSKWTGTVYM--------FSLVGAFLSDsYWGRYLTCTIFQ 138
Cdd:cd17329    2 WVLLIGSFLNRLGFFMVWPFMAIYLHQQLGLS--------ASIVGLVLAlsavagivASLIGGRLAD-RFGRKPVMLAGL 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257324001 139 VIFVIGVGLLSFVSWFFLikprgcgdgdlecnppsslgVAIFYLsvyLVAFGYGGHQPTLATFGADQLDDDKnsKAAFFS 218
Cdd:cd17329   73 LLRALGFALLGFAHSPWL--------------------FAIALV---LTGFGGGLFEPASEAMIADVTTPEN--RTRAFS 127
                        170
                 ....*....|.
gi 257324001 219 YFYFALNVGAL 229
Cdd:cd17329  128 LLYWAINLGVA 138
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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