CCT motif; This short motif is found in a number of plant proteins. It is rich in basic amino acids and has been called a CCT motif after Co, Col and Toc1. The CCT motif is about 45 amino acids long and contains a putative nuclear localization signal within the second half of the CCT motif. Toc1 mutants have been identified in this region.

                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 257313608  286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKK 329
Cdd:pfam06203   1 REEALLRYREKRKTRKFDKKIRYESRKALADKRPRVKGRFVKAD 44

B-box-type 1 zinc finger found in B-box (BBX) family of plant transcription factors and similar proteins; The BBX family includes a group of zinc finger transcription factors that contain one or two B-box motifs, and sometimes also feature a CCT (CONSTANS, CO-like, and TOC1) domain. They play important roles in plant growth and development, including seedling photomorphogenesis, photoperiodic regulation of flowering, shade avoidance, and responses to biotic and abiotic stresses. Their B-box motifs show high sequence similarity with B-Box-type 1 zinc finger found in tripartite motif-containing proteins (TRIMs) and are involved in mediating transcriptional regulation and protein-protein interaction in plant signaling. The type 1 B-box (Bbox1) zinc finger is characterized by a C6H2 zinc-binding consensus motif; this family contains a modified motif, C3XC2H2, where X can be D, E, C or H.

                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 257313608  54 VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
Cdd:cd19821    1 LCDSCESAPAVVYCRADRASLCRACDAKVHSANKLASRHQRVPL 44

CCT motif; This short motif is found in a number of plant proteins. It is rich in basic amino acids and has been called a CCT motif after Co, Col and Toc1. The CCT motif is about 45 amino acids long and contains a putative nuclear localization signal within the second half of the CCT motif. Toc1 mutants have been identified in this region.

                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 257313608  286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKK 329
Cdd:pfam06203   1 REEALLRYREKRKTRKFDKKIRYESRKALADKRPRVKGRFVKAD 44

B-box-type 1 zinc finger found in B-box (BBX) family of plant transcription factors and similar proteins; The BBX family includes a group of zinc finger transcription factors that contain one or two B-box motifs, and sometimes also feature a CCT (CONSTANS, CO-like, and TOC1) domain. They play important roles in plant growth and development, including seedling photomorphogenesis, photoperiodic regulation of flowering, shade avoidance, and responses to biotic and abiotic stresses. Their B-box motifs show high sequence similarity with B-Box-type 1 zinc finger found in tripartite motif-containing proteins (TRIMs) and are involved in mediating transcriptional regulation and protein-protein interaction in plant signaling. The type 1 B-box (Bbox1) zinc finger is characterized by a C6H2 zinc-binding consensus motif; this family contains a modified motif, C3XC2H2, where X can be D, E, C or H.

                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 257313608  54 VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
Cdd:cd19821    1 LCDSCESAPAVVYCRADRASLCRACDAKVHSANKLASRHQRVPL 44

B-box zinc finger;

                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 257313608   51 RVRVCQSCERAPAAFFCKADAASLCTTCDSEIHsanplaRRHQRVPI 97
Cdd:pfam00643   2 KERLCPEHEEEPLTLYCNDCQELLCEECSVGEH------RGHTVVPL 42

CCT motif; This short motif is found in a number of plant proteins. It is rich in basic amino acids and has been called a CCT motif after Co, Col and Toc1. The CCT motif is about 45 amino acids long and contains a putative nuclear localization signal within the second half of the CCT motif. Toc1 mutants have been identified in this region.

                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 257313608  286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKK 329
Cdd:pfam06203   1 REEALLRYREKRKTRKFDKKIRYESRKALADKRPRVKGRFVKAD 44

B-box-type 1 zinc finger found in B-box (BBX) family of plant transcription factors and similar proteins; The BBX family includes a group of zinc finger transcription factors that contain one or two B-box motifs, and sometimes also feature a CCT (CONSTANS, CO-like, and TOC1) domain. They play important roles in plant growth and development, including seedling photomorphogenesis, photoperiodic regulation of flowering, shade avoidance, and responses to biotic and abiotic stresses. Their B-box motifs show high sequence similarity with B-Box-type 1 zinc finger found in tripartite motif-containing proteins (TRIMs) and are involved in mediating transcriptional regulation and protein-protein interaction in plant signaling. The type 1 B-box (Bbox1) zinc finger is characterized by a C6H2 zinc-binding consensus motif; this family contains a modified motif, C3XC2H2, where X can be D, E, C or H.

                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 257313608  54 VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
Cdd:cd19821    1 LCDSCESAPAVVYCRADRASLCRACDAKVHSANKLASRHQRVPL 44

B-box-type 1 zinc finger (Bbox1); The B-box-type zinc finger is a short zinc binding domain of around 40 amino acid residues in length. It has been found in transcription factors, ribonucleoproteins and proto-oncoproteins, such as in TRIM (tripartite motif) proteins that consist of an N-terminal RING finger (originally called an A-box), followed by 1-2 B-box domains and a coiled-coil domain (also called RBCC for Ring, B-box, Coiled-Coil). The B-box-type zinc finger often presents in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain, in functionally unrelated proteins, most likely mediating protein-protein interactions. Based on different consensus sequences and the spacing of the 7-8 zinc-binding residues, the B-box-type zinc fingers can be divided into two groups, type 1 (Bbox1: C6H2) and type 2 (Bbox2: CHC3H2). This family corresponds to the type 1 B-box (Bbox1).

                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 257313608  12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV 54
Cdd:cd19757    2 CDECEEREATVYCLECEEFLCDDCSDAIHRRGKLTRSHKLVPL 44

B-box zinc finger;

                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 257313608   51 RVRVCQSCERAPAAFFCKADAASLCTTCDSEIHsanplaRRHQRVPI 97
Cdd:pfam00643   2 KERLCPEHEEEPLTLYCNDCQELLCEECSVGEH------RGHTVVPL 42

B-box-type 1 zinc finger found in HOIL-1-interacting protein (HOIP) and similar proteins; HOIP, also termed RING finger protein 31 (RNF31), or zinc in-between-RING-finger ubiquitin-associated domain protein, together with HOIL-1 and SHARPIN, forms the E3-ligase complex (also known as linear-ubiquitin-chain assembly complex LUBAC) that regulates NF-kappaB activity and apoptosis. It also interacts with the atypical mammalian orphan receptor DAX-1, trigger DAX-1 ubiquitination and stabilization, and participate in repressing steroidogenic gene expression. HOIP contains a B-box motif that shows high sequence similarity with B-Box-type 1 zinc finger found in tripartite motif-containing proteins (TRIMs). The type 1 B-box (Bbox1) zinc finger is characterized by a C6H2 zinc-binding consensus motif.

                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 257313608  55 CQSCERAPAAFFCKADAASLCTTCDSEIHSaNPLARRHQRVPI 97
Cdd:cd19815    2 CDLCGEAAASVFCASCEDKLCLSCDDLYHK-HPARRSHHRQPI 43