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Conserved domains on  [gi|257316906|emb|CBC21166|]
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unnamed protein product [Arabidopsis thaliana]

Protein Classification

SAUR-like auxin-responsive family protein( domain architecture ID 581161)

SAUR-like auxin-responsive family protein similar to Arabidopsis thaliana SAUR proteins that may provide a mechanistic link between auxin and plasma membrane H(+)-ATPases (PM H(+)-ATPases)

Gene Ontology:  GO:0009733

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN03090 super family cl23790
auxin-responsive family protein; Provisional
 1-97 5.67e-32

auxin-responsive family protein; Provisional


The actual alignment was detected with superfamily member PLN03220:

Pssm-ID: 474056  Cd Length: 105  Bit Score: 107.91  E-value: 5.67e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257316906   1 MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGET--YHRKRFVIPISYLNHPLFQGLLNLAEEEFGF 78
Cdd:PLN03220   1 MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQieMEKKRFVVPISFLNHPSFKEFLSRAEEEFGF 80

                         90
                 ....*....|....*....
gi 257316906  79 DHPMGGLTIPCTEDYFTAL 97
Cdd:PLN03220  81 NHPMGGLTIPCREEVFLDL 99
 
Name Accession Description Interval E-value
PLN03220 PLN03220
uncharacterized protein; Provisional
 1-97 5.67e-32

uncharacterized protein; Provisional


Pssm-ID: 178759  Cd Length: 105  Bit Score: 107.91  E-value: 5.67e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257316906   1 MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGET--YHRKRFVIPISYLNHPLFQGLLNLAEEEFGF 78
Cdd:PLN03220   1 MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQieMEKKRFVVPISFLNHPSFKEFLSRAEEEFGF 80

                         90
                 ....*....|....*....
gi 257316906  79 DHPMGGLTIPCTEDYFTAL 97
Cdd:PLN03220  81 NHPMGGLTIPCREEVFLDL 99
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 8-94 1.67e-31

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 106.18  E-value: 1.67e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257316906    8 LSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETyhRKRFVIPISYLNHPLFQGLLNLAEEEFGFDHpMGGLTI 87
Cdd:pfam02519   4 MARKWQKRAALGRKRISSPRTTSSSDVPEKGHFVVYVGDE--RRRFVVPLEYLNHPLFRELLRMSEEEFGFPS-DGPITL 80


                  ....*..
gi 257316906   88 PCTEDYF 94
Cdd:pfam02519  81 PCDVVVF 87
 
Name Accession Description Interval E-value
PLN03220 PLN03220
uncharacterized protein; Provisional
 1-97 5.67e-32

uncharacterized protein; Provisional


Pssm-ID: 178759  Cd Length: 105  Bit Score: 107.91  E-value: 5.67e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257316906   1 MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGET--YHRKRFVIPISYLNHPLFQGLLNLAEEEFGF 78
Cdd:PLN03220   1 MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQieMEKKRFVVPISFLNHPSFKEFLSRAEEEFGF 80

                         90
                 ....*....|....*....
gi 257316906  79 DHPMGGLTIPCTEDYFTAL 97
Cdd:PLN03220  81 NHPMGGLTIPCREEVFLDL 99
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 8-94 1.67e-31

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 106.18  E-value: 1.67e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257316906    8 LSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETyhRKRFVIPISYLNHPLFQGLLNLAEEEFGFDHpMGGLTI 87
Cdd:pfam02519   4 MARKWQKRAALGRKRISSPRTTSSSDVPEKGHFVVYVGDE--RRRFVVPLEYLNHPLFRELLRMSEEEFGFPS-DGPITL 80


                  ....*..
gi 257316906   88 PCTEDYF 94
Cdd:pfam02519  81 PCDVVVF 87
PLN03219 PLN03219
uncharacterized protein; Provisional
 1-99 2.04e-30

uncharacterized protein; Provisional


Pssm-ID: 178758 [Multi-domain]  Cd Length: 108  Bit Score: 104.06  E-value: 2.04e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257316906   1 MGIQLIGLSQAKQKLQ----RSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISYLNHPLFQGLLNLAEEEF 76
Cdd:PLN03219   1 MGLMRSMLPNAKQIFKsqsmRNKNGSSSPSSSTTTSGLVPKGHVAVYVGEQMEKKRFVVPISYLNHPLFREFLNRAEEEC 80

                         90       100
                 ....*....|....*....|...
gi 257316906  77 GFDHPMGGLTIPCTEDYFTALAS 99
Cdd:PLN03219  81 GFHHSMGGLTIPCREESFLHLIT 103
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 33-101 7.16e-30

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 102.54  E-value: 7.16e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 257316906  33 NNVPKGHVAVYVGEtyHRKRFVIPISYLNHPLFQGLLNLAEEEFGFDHPMgGLTIPCTEDYFTALASIL 101
Cdd:PLN03090  38 LDVPKGHFPVYVGE--NRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDM-GLTIPCEEVVFRSLTSMI 103
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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