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Conserved domains on  [gi|219895215|emb|CAW95368|]
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unnamed protein product [Arabidopsis thaliana]

Protein Classification

flavin-containing monooxygenase( domain architecture ID 11449697)

flavin-containing monooxygenase (FMO) catalyses the flavin-dependent oxidation of ketones and cyclic ketones to esters and lactones, by using molecular oxygen and NAD(P)H.

CATH:  3.50.50.60
Gene Ontology:  GO:0016709|GO:0004497|GO:0050660
PubMed:  20015679|33588053

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
18-371 8.70e-84

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


:

Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 262.11  E-value: 8.70e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  18 IIVGAGPSGLAVAACLSNRGVPSVILERTDCLASLWQKRTYDRLKLHLPKHFCELPLMPFPKNFPKYPSKQLFISYVESY 97
Cdd:COG2072   10 VVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRDNRYPGLRLDTPSHLYSLPFFPNWSDDPDFPTGDEILAYLEAY 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  98 AARFNIKP--VFNQTVEKAEFDDASGLWNVKTQDG-VYTSTWLVVATGENAEPVFPNIPGLKKFTGPVVHTSAYKSGSAF 174
Cdd:COG2072   90 ADKFGLRRpiRFGTEVTSARWDEADGRWTVTTDDGeTLTARFVVVATGPLSRPKIPDIPGLEDFAGEQLHSADWRNPVDL 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215 175 ANRKVLVVGCGNSGMEVSLDLCRYNALPHMVVRNSVHVLPR----DFFGLSTFGIAMTLLKWFPLKLVDKFLLLLANSTL 250
Cdd:COG2072  170 AGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPRpnydPERGRPANYLGLEAPPALNRRDARAWLRRLLRAQV 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215 251 GNTDlLGLRRPKTGPIelknvtGKTPVLDVGAISLIRSGQIK-VTQAVKEITRNGAKFLNGKEIEFDSIILATGYKSNVP 329
Cdd:COG2072  250 KDPE-LGLLTPDYPPG------CKRPLLSTDYYEALRRGNVElVTGGIERITEDGVVFADGTEHEVDVIVWATGFRADLP 322
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 219895215 330 dWLKENSFF---------TKEGMPKTPFPNgwkgekgLYTVGFTR-RGLSGT 371
Cdd:COG2072  323 -WLAPLDVRgrdgrsgprAYLGVVVPGFPN-------LFFLGPNSpSGHSSL 366
 
Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
18-371 8.70e-84

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 262.11  E-value: 8.70e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  18 IIVGAGPSGLAVAACLSNRGVPSVILERTDCLASLWQKRTYDRLKLHLPKHFCELPLMPFPKNFPKYPSKQLFISYVESY 97
Cdd:COG2072   10 VVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRDNRYPGLRLDTPSHLYSLPFFPNWSDDPDFPTGDEILAYLEAY 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  98 AARFNIKP--VFNQTVEKAEFDDASGLWNVKTQDG-VYTSTWLVVATGENAEPVFPNIPGLKKFTGPVVHTSAYKSGSAF 174
Cdd:COG2072   90 ADKFGLRRpiRFGTEVTSARWDEADGRWTVTTDDGeTLTARFVVVATGPLSRPKIPDIPGLEDFAGEQLHSADWRNPVDL 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215 175 ANRKVLVVGCGNSGMEVSLDLCRYNALPHMVVRNSVHVLPR----DFFGLSTFGIAMTLLKWFPLKLVDKFLLLLANSTL 250
Cdd:COG2072  170 AGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPRpnydPERGRPANYLGLEAPPALNRRDARAWLRRLLRAQV 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215 251 GNTDlLGLRRPKTGPIelknvtGKTPVLDVGAISLIRSGQIK-VTQAVKEITRNGAKFLNGKEIEFDSIILATGYKSNVP 329
Cdd:COG2072  250 KDPE-LGLLTPDYPPG------CKRPLLSTDYYEALRRGNVElVTGGIERITEDGVVFADGTEHEVDVIVWATGFRADLP 322
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 219895215 330 dWLKENSFF---------TKEGMPKTPFPNgwkgekgLYTVGFTR-RGLSGT 371
Cdd:COG2072  323 -WLAPLDVRgrdgrsgprAYLGVVVPGFPN-------LFFLGPNSpSGHSSL 366
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
19-329 3.25e-26

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 110.25  E-value: 3.25e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215   19 IVGAGPSGLAVAACLSNRGVPSVILERTDCLASLWQ---------KRTYDRLKLHLPKHFCELPLMPFPKNFPKYPSKQL 89
Cdd:pfam00743   6 VIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRftenveegrASIYKSVITNTSKEMSCFSDFPFPEDYPNFMHNSK 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215   90 FISYVESYAARFNI-KPVFNQT----VEKAEFDDASGLWNV------KTQDGVYTStwLVVATGENAEPVFP--NIPGLK 156
Cdd:pfam00743  86 FLEYFRMFAKEFDLlKYIQFKTtvcsVKKRPDFSTSGQWEVvtehegKQESAVFDA--VMVCTGHHTNPHLPleSFPGIE 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  157 KFTGPVVHTSAYKSGSAFANRKVLVVGCGNSGMEVSLDLCRYNALPHMVVRNSVHVL--------PRDFFGLSTFG---- 224
Cdd:pfam00743 164 KFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLsrvsdhgyPWDMLFSTRFTsflr 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  225 --IAMTLLKWFPLKLVDKFLlllanstlgNTDLLGLrRPKTGpielknVTGKTPVLDVGAISLIRSGQIKVTQAVKEITR 302
Cdd:pfam00743 244 niLPTSISNWLMEKQMNRRF---------NHENYGL-KPKNR------ALSKEPVVNDDLPNRILCGAVKVKPNVKEFTE 307
                         330       340
                  ....*....|....*....|....*...
gi 219895215  303 NGAKFLNG-KEIEFDSIILATGYKSNVP 329
Cdd:pfam00743 308 TSAIFEDGtVEEDIDVVIFATGYTFAFP 335
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
19-209 4.45e-16

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 79.52  E-value: 4.45e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  19 IVGAGPSGLAVAACLSNRGVPSVILERTDCLASLW--------------------QKRTYDRLKLHLPKH---FCELPLM 75
Cdd:PLN02172  15 VIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWvytpksesdplsldptrsivHSSVYESLRTNLPREcmgYRDFPFV 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  76 PFP----KNFPKYPSKQLFISYVESYAARFNIKPVFNQTVEKAEFDDASGLWNVKTQ-------DGVYTStwLVVATGEN 144
Cdd:PLN02172  95 PRFddesRDSRRYPSHREVLAYLQDFAREFKIEEMVRFETEVVRVEPVDGKWRVQSKnsggfskDEIFDA--VVVCNGHY 172
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 219895215 145 AEPVFPNIPGLKKFTGPVVHTSAYKSGSAFANRKVLVVGCGNSGMEVSLDLCRYNALPHMVVRNS 209
Cdd:PLN02172 173 TEPNVAHIPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIASRAS 237
 
Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
18-371 8.70e-84

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 262.11  E-value: 8.70e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  18 IIVGAGPSGLAVAACLSNRGVPSVILERTDCLASLWQKRTYDRLKLHLPKHFCELPLMPFPKNFPKYPSKQLFISYVESY 97
Cdd:COG2072   10 VVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRDNRYPGLRLDTPSHLYSLPFFPNWSDDPDFPTGDEILAYLEAY 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  98 AARFNIKP--VFNQTVEKAEFDDASGLWNVKTQDG-VYTSTWLVVATGENAEPVFPNIPGLKKFTGPVVHTSAYKSGSAF 174
Cdd:COG2072   90 ADKFGLRRpiRFGTEVTSARWDEADGRWTVTTDDGeTLTARFVVVATGPLSRPKIPDIPGLEDFAGEQLHSADWRNPVDL 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215 175 ANRKVLVVGCGNSGMEVSLDLCRYNALPHMVVRNSVHVLPR----DFFGLSTFGIAMTLLKWFPLKLVDKFLLLLANSTL 250
Cdd:COG2072  170 AGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPRpnydPERGRPANYLGLEAPPALNRRDARAWLRRLLRAQV 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215 251 GNTDlLGLRRPKTGPIelknvtGKTPVLDVGAISLIRSGQIK-VTQAVKEITRNGAKFLNGKEIEFDSIILATGYKSNVP 329
Cdd:COG2072  250 KDPE-LGLLTPDYPPG------CKRPLLSTDYYEALRRGNVElVTGGIERITEDGVVFADGTEHEVDVIVWATGFRADLP 322
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 219895215 330 dWLKENSFF---------TKEGMPKTPFPNgwkgekgLYTVGFTR-RGLSGT 371
Cdd:COG2072  323 -WLAPLDVRgrdgrsgprAYLGVVVPGFPN-------LFFLGPNSpSGHSSL 366
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
19-329 3.25e-26

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 110.25  E-value: 3.25e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215   19 IVGAGPSGLAVAACLSNRGVPSVILERTDCLASLWQ---------KRTYDRLKLHLPKHFCELPLMPFPKNFPKYPSKQL 89
Cdd:pfam00743   6 VIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRftenveegrASIYKSVITNTSKEMSCFSDFPFPEDYPNFMHNSK 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215   90 FISYVESYAARFNI-KPVFNQT----VEKAEFDDASGLWNV------KTQDGVYTStwLVVATGENAEPVFP--NIPGLK 156
Cdd:pfam00743  86 FLEYFRMFAKEFDLlKYIQFKTtvcsVKKRPDFSTSGQWEVvtehegKQESAVFDA--VMVCTGHHTNPHLPleSFPGIE 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  157 KFTGPVVHTSAYKSGSAFANRKVLVVGCGNSGMEVSLDLCRYNALPHMVVRNSVHVL--------PRDFFGLSTFG---- 224
Cdd:pfam00743 164 KFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLsrvsdhgyPWDMLFSTRFTsflr 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  225 --IAMTLLKWFPLKLVDKFLlllanstlgNTDLLGLrRPKTGpielknVTGKTPVLDVGAISLIRSGQIKVTQAVKEITR 302
Cdd:pfam00743 244 niLPTSISNWLMEKQMNRRF---------NHENYGL-KPKNR------ALSKEPVVNDDLPNRILCGAVKVKPNVKEFTE 307
                         330       340
                  ....*....|....*....|....*...
gi 219895215  303 NGAKFLNG-KEIEFDSIILATGYKSNVP 329
Cdd:pfam00743 308 TSAIFEDGtVEEDIDVVIFATGYTFAFP 335
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
24-328 1.04e-23

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 99.99  E-value: 1.04e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215   24 PSGLAVAACLSNRGVPS-VILERTDCLASLwqkrtydrlkLHLPKH------------FcELPLMPF------PKNFPK- 83
Cdd:pfam13738   1 PAGIGCAIALKKAGLEDyLILEKGNIGNSF----------YRYPTHmtffspsftsngF-GIPDLNAispgtsPAFTFNr 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215   84 -YPSKQLFISYVESYAARFNIKPVFNQTVEKAEFDDasGLWNVKTQDGVYTSTWLVVATGENAEPVFPNIPGLkkftgpV 162
Cdd:pfam13738  70 eHPSGNEYAEYLRRVADHFELPINLFEEVTSVKKED--DGFVVTTSKGTYQARYVIIATGEFDFPNKLGVPEL------P 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  163 VHTSAYKSGSAFANRKVLVVGCGNSGMEVSLDLCRYNALPHMVVRNSVhvlprdffglstfgiamtllkWFPlklvdkfl 242
Cdd:pfam13738 142 KHYSYVKDFHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLYRGSE---------------------WED-------- 192
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  243 lllanstlGNTDLLGLRRPKTGPiELKnvtgktpvldvgaiSLIRSGQIKV--TQAVKEITRNGAKFL----NGKEIE-F 315
Cdd:pfam13738 193 --------RDSDPSYSLSPDTLN-RLE--------------ELVKNGKIKAhfNAEVKEITEVDVSYKvhteDGRKVTsN 249
                         330
                  ....*....|...
gi 219895215  316 DSIILATGYKSNV 328
Cdd:pfam13738 250 DDPILATGYHPDL 262
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
18-207 6.18e-18

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 83.63  E-value: 6.18e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  18 IIVGAGPSGLAVAACLSNRGVPSVILERTDCLASLWQ-KRTYdrlklhlpkhfcelplmpfpkNFPKYPSKqlfIS---Y 93
Cdd:COG0492    4 VIIGAGPAGLTAAIYAARAGLKTLVIEGGEPGGQLATtKEIE---------------------NYPGFPEG---ISgpeL 59
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  94 VESY---AARFNIKpVFNQTVEKAEFDDasGLWNVKTQDG-VYTSTWLVVATGenAEPVFPNIPGLKKFTGPVVHTSAYK 169
Cdd:COG0492   60 AERLreqAERFGAE-ILLEEVTSVDKDD--GPFRVTTDDGtEYEAKAVIIATG--AGPRKLGLPGEEEFEGRGVSYCATC 134
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 219895215 170 SGSAFANRKVLVVGCGNSGMEVSLDLCRYNALPHMVVR 207
Cdd:COG0492  135 DGFFFRGKDVVVVGGGDSALEEALYLTKFASKVTLIHR 172
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
19-209 4.45e-16

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 79.52  E-value: 4.45e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  19 IVGAGPSGLAVAACLSNRGVPSVILERTDCLASLW--------------------QKRTYDRLKLHLPKH---FCELPLM 75
Cdd:PLN02172  15 VIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWvytpksesdplsldptrsivHSSVYESLRTNLPREcmgYRDFPFV 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  76 PFP----KNFPKYPSKQLFISYVESYAARFNIKPVFNQTVEKAEFDDASGLWNVKTQ-------DGVYTStwLVVATGEN 144
Cdd:PLN02172  95 PRFddesRDSRRYPSHREVLAYLQDFAREFKIEEMVRFETEVVRVEPVDGKWRVQSKnsggfskDEIFDA--VVVCNGHY 172
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 219895215 145 AEPVFPNIPGLKKFTGPVVHTSAYKSGSAFANRKVLVVGCGNSGMEVSLDLCRYNALPHMVVRNS 209
Cdd:PLN02172 173 TEPNVAHIPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIASRAS 237
Lys_Orn_oxgnase pfam13434
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold ...
79-325 5.42e-11

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold oxidoreductases that catalyze NADPH-dependent hydroxylation and are involved in siderophore biosynthesis. This family includes L-ornithine 5-monooxygenase, which catalyzes the hydroxylation of L-ornithine at the N5 position, and L-lysine 6-monooxygenase, which catalyzes the hydroxylation of lysine at the N6 position (EC:1.14.13.59).


Pssm-ID: 433204 [Multi-domain]  Cd Length: 338  Bit Score: 63.37  E-value: 5.42e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215   79 KNFpkYPSKQLFISYVESYAARFNIKPVFNQTVEKAEFDDASGLW----NVKTQDG---VYTSTWLVVATGenaepVFPN 151
Cdd:pfam13434  88 ETF--FPSRREFNDYLQWAASHLPNRLRFGQEVESVEPDAERGEPllrvRVRDADGeetTFLARNLVLGTG-----GEPY 160
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  152 IPGLKKFTGPVVHTSAY--KSGSAFANRKVLVVGCGNSGMEVSLDL-CRYNALP-HMVVRnSVHVLPRDF--FGLSTFGI 225
Cdd:pfam13434 161 IPECARGGERVFHSSEYleRIDRLAAKKRIAVVGSGQSAAEIFRDLlRRGPAYElTWVTR-SPNFFPLDDspFVNEIFSP 239
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  226 AMTllKWF---P----LKLVDKFLLLL---ANSTLGNT--DLLGLRRPKTG-PIELKNVTgktpvlDVGAISLIRSGQIK 292
Cdd:pfam13434 240 EYV--DYFyslPedtrRALLREQKGTNydgIDPSLIEEiyRLLYEQRVDGDpRHRLLPNR------EVQSAERVGDGGVE 311
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 219895215  293 VTqavkeiTRNGakfLNGKE--IEFDSIILATGYK 325
Cdd:pfam13434 312 LT------LRDG---EQGREetLETDVVVLATGYR 337
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
18-379 1.88e-10

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 61.57  E-value: 1.88e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215   18 IIVGAGPSGLAVAACLSNRGVP-SVILERTDCLaslwqkrtYDRLKLHLpkhfcELPLMPFPKNFPKYPSKqlFISYVES 96
Cdd:pfam07992   4 VVIGGGPAGLAAALTLAQLGGKvTLIEDEGTCP--------YGGCVLSK-----ALLGAAEAPEIASLWAD--LYKRKEE 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215   97 YAARFNIKPVFNQTVEKAEFDDASG---LWNVKTQDGV-YTSTWLVVATGenAEPVFPNIPGLKKFTGPVVHT--SAYKS 170
Cdd:pfam07992  69 VVKKLNNGIEVLLGTEVVSIDPGAKkvvLEELVDGDGEtITYDRLVIATG--ARPRLPPIPGVELNVGFLVRTldSAEAL 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  171 GSAFANRKVLVVGCGNSGMEVSLDLCRYNAlphmvvrnSVHVLPRDFFGLSTFGIAMTllkwfplKLVDKFLlllanstl 250
Cdd:pfam07992 147 RLKLLPKRVVVVGGGYIGVELAAALAKLGK--------EVTLIEALDRLLRAFDEEIS-------AALEKAL-------- 203
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  251 gntdllglrrpktgpiELKNVtgktpvldvgaislirsgQIKVTQAVKEITRNGAKFL----NGKEIEFDSIILATGYKS 326
Cdd:pfam07992 204 ----------------EKNGV------------------EVRLGTSVKEIIGDGDGVEvilkDGTEIDADLVVVAIGRRP 249
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 219895215  327 NvPDWLKE--------NSFFTKEGMpKTPFPngwkgekGLYTVGFTRRGLSGTAYDAVKIA 379
Cdd:pfam07992 250 N-TELLEAaglelderGGIVVDEYL-RTSVP-------GIYAAGDCRVGGPELAQNAVAQG 301
IucD COG3486
Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport and catabolism] ...
20-332 2.71e-10

Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442709 [Multi-domain]  Cd Length: 440  Bit Score: 61.72  E-value: 2.71e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  20 VGAGPSGLAVAACLSN-RGVPSVILERTDC---------------------LASL------W--------QKRTYDRLkl 63
Cdd:COG3486   12 IGIGPFNLGLAALLDElPDLDALFLERKPEfdwhpgmllegatlqvpflkdLVTLadptspFsflnylkeHGRLYDFY-- 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  64 hlpkhfcelplmpFPKNFpkYPSKQLFISYVESYAARF-NIKpvFNQTVEKAEFDDASGLWNVKTQDG-----VYTSTWL 137
Cdd:COG3486   90 -------------NRENF--FPLRREYNDYCRWAAEQLdNVR--FGTEVEAVEYDDDAGAFRVTVRDGtgereTYRARNL 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215 138 VVATGenAEPVFPniPGLKKFTGP-VVHTSAY--KSGSAFANRKVLVVGCGNSGMEVSLDLCRYNALPHMVVrNSVHVLP 214
Cdd:COG3486  153 VLGTG--TRPYLP--ECFRGLPGErVFHSSEYlhRKEDLQAAKRVTVVGSGQSAAEIFLDLLRRQDGPGAEL-TWVTRSP 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215 215 RdFFGL--STFGIAMTllkwFP--------------LKLVDKFLLL---LANSTLGNT-DLLGLRRpktgpielknVTGK 274
Cdd:COG3486  228 G-FFPLdySKFTNEIF----SPeyvdyfyalpeevrDRLLAEQKLLykgISPDLINEIyDLLYERS----------VGGD 292
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 219895215 275 TPvldvgAISLIRSgqikvtQAVKEITRNGAKF-------LNGK--EIEFDSIILATGYKSNVPDWL 332
Cdd:COG3486  293 PP-----RVRLLPN------SEVTAVERAGGGYrltlrhlETGErfELETDAVVLATGYRPRLPAFL 348
PRK06126 PRK06126
hypothetical protein; Provisional
18-103 3.52e-07

hypothetical protein; Provisional


Pssm-ID: 235704 [Multi-domain]  Cd Length: 545  Bit Score: 52.30  E-value: 3.52e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  18 IIVGAGPSGLAVAACLSNRGVPSVILERTDCL-----ASLWQKRT---YDRLKLHLPKHFCelplmPFPKNFPkypskqL 89
Cdd:PRK06126  11 LIVGGGPVGLALALDLGRRGVDSILVERKDGTafnpkANTTSARSmehFRRLGIADEVRSA-----GLPVDYP------T 79
                         90
                 ....*....|....*...
gi 219895215  90 FISYVESYA----ARFNI 103
Cdd:PRK06126  80 DIAYFTRLTgyelARFRL 97
PRK08132 PRK08132
FAD-dependent oxidoreductase; Provisional
18-61 7.62e-07

FAD-dependent oxidoreductase; Provisional


Pssm-ID: 236158 [Multi-domain]  Cd Length: 547  Bit Score: 51.02  E-value: 7.62e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 219895215  18 IIVGAGPSGLAVAACLSNRGVPSVILERTDCL-----ASLWQKRT---YDRL 61
Cdd:PRK08132  27 VVVGAGPVGLALAIDLAQQGVPVVLLDDDDTLstgsrAICFAKRSleiFDRL 78
PRK10262 PRK10262
thioredoxin reductase; Provisional
79-207 8.62e-06

thioredoxin reductase; Provisional


Pssm-ID: 182343 [Multi-domain]  Cd Length: 321  Bit Score: 47.36  E-value: 8.62e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  79 KNFPKYPSK---QLFISYVESYAARFNIKPVFNQtVEKAEFDDASglWNVKTQDGVYTSTWLVVATGENAEpvFPNIPGL 155
Cdd:PRK10262  51 ENWPGDPNDltgPLLMERMHEHATKFETEIIFDH-INKVDLQNRP--FRLTGDSGEYTCDALIIATGASAR--YLGLPSE 125
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 219895215 156 KKFTGPVVHTSAYKSGSAFANRKVLVVGCGNSGMEVSLDLCRYNALPHMVVR 207
Cdd:PRK10262 126 EAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHR 177
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
18-45 2.05e-05

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 46.08  E-value: 2.05e-05
                         10        20
                 ....*....|....*....|....*...
gi 219895215  18 IIVGAGPSGLAVAACLSNRGVPSVILER 45
Cdd:COG0654    7 LIVGGGPAGLALALALARAGIRVTVVER 34
NirB COG1251
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
18-215 9.72e-05

NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];


Pssm-ID: 440863 [Multi-domain]  Cd Length: 402  Bit Score: 44.36  E-value: 9.72e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  18 IIVGAGPSGLAVAACLSNRG--VPSVILERTDCLAslwqkrtYDRLklHLPKHFCElplmpfpknfpKYPSKQLFIsYVE 95
Cdd:COG1251    5 VIIGAGMAGVRAAEELRKLDpdGEITVIGAEPHPP-------YNRP--PLSKVLAG-----------ETDEEDLLL-RPA 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  96 SYAARFNIKPVFNQTVEkaEFDDASGLwnVKTQDGvytSTW----LVVATGenAEPVFPNIPGLkkfTGPVVHT-----S 166
Cdd:COG1251   64 DFYEENGIDLRLGTRVT--AIDRAART--VTLADG---ETLpydkLVLATG--SRPRVPPIPGA---DLPGVFTlrtldD 131
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 219895215 167 AYKSGSAFAN-RKVLVVGCGNSGMEVSLDLCRYNALPHMVVRNSvHVLPR 215
Cdd:COG1251  132 ADALRAALAPgKRVVVIGGGLIGLEAAAALRKRGLEVTVVERAP-RLLPR 180
PRK08243 PRK08243
4-hydroxybenzoate 3-monooxygenase; Validated
19-45 1.83e-04

4-hydroxybenzoate 3-monooxygenase; Validated


Pssm-ID: 236198 [Multi-domain]  Cd Length: 392  Bit Score: 43.25  E-value: 1.83e-04
                         10        20
                 ....*....|....*....|....*..
gi 219895215  19 IVGAGPSGLAVAACLSNRGVPSVILER 45
Cdd:PRK08243   7 IIGAGPAGLLLGQLLHLAGIDSVVLER 33
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
19-49 3.47e-04

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 38.67  E-value: 3.47e-04
                          10        20        30
                  ....*....|....*....|....*....|.
gi 219895215   19 IVGAGPSGLAVAACLSNRGVPSVILERTDCL 49
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRL 31
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
87-334 3.68e-04

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 42.11  E-value: 3.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215  87 KQLFISYVESYAaRFNIKPVFNQTVEKaeFDDASGLwnVKTQDG-VYTSTWLVVATGenAEPVFPNIPGLkkfTGPVVHT 165
Cdd:COG0446   36 EDLLVRTPESFE-RKGIDVRTGTEVTA--IDPEAKT--VTLRDGeTLSYDKLVLATG--ARPRPPPIPGL---DLPGVFT 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215 166 -----------SAYKSGSAfanRKVLVVGCGNSGMEVSLDLCRYNALPHMVVRNSvHVLPRdffglstfgiamtllkwfp 234
Cdd:COG0446  106 lrtlddadalrEALKEFKG---KRAVVIGGGPIGLELAEALRKRGLKVTLVERAP-RLLGV------------------- 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215 235 lklVDKFLLLLANSTLgntdllglrrpktgpiELKNVTgktpvldvgaislIRSGQiKVTqAVKEITRNGAKFLNGKEIE 314
Cdd:COG0446  163 ---LDPEMAALLEEEL----------------REHGVE-------------LRLGE-TVV-AIDGDDKVAVTLTDGEEIP 208
                        250       260
                 ....*....|....*....|
gi 219895215 315 FDSIILATGYKSNVpDWLKE 334
Cdd:COG0446  209 ADLVVVAPGVRPNT-ELAKD 227
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
18-49 4.22e-04

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 42.13  E-value: 4.22e-04
                         10        20        30
                 ....*....|....*....|....*....|..
gi 219895215  18 IIVGAGPSGLAVAACLSNRGVPSVILERTDCL 49
Cdd:COG1232    5 AVIGGGIAGLTAAYRLAKAGHEVTVLEASDRV 36
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
18-47 1.38e-03

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 40.60  E-value: 1.38e-03
                         10        20        30
                 ....*....|....*....|....*....|
gi 219895215  18 IIVGAGPSGLAVAACLSNRGVPSVILERTD 47
Cdd:COG1233    7 VVIGAGIGGLAAAALLARAGYRVTVLEKND 36
PRK07208 PRK07208
hypothetical protein; Provisional
17-47 2.93e-03

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 39.87  E-value: 2.93e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 219895215  17 PIIVGAGPSGLAVAACLSNRGVPSVILERTD 47
Cdd:PRK07208   7 VVIIGAGPAGLTAAYELLKRGYPVTVLEADP 37
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
19-49 3.18e-03

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 39.50  E-value: 3.18e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 219895215  19 IVGAGPSGLAVAACLSNRGVPSVILERTDCL 49
Cdd:PRK06183  15 IVGAGPVGLTLANLLGQYGVRVLVLERWPTL 45
PRK06184 PRK06184
hypothetical protein; Provisional
19-47 3.24e-03

hypothetical protein; Provisional


Pssm-ID: 235728 [Multi-domain]  Cd Length: 502  Bit Score: 39.58  E-value: 3.24e-03
                         10        20
                 ....*....|....*....|....*....
gi 219895215  19 IVGAGPSGLAVAACLSNRGVPSVILERTD 47
Cdd:PRK06184   8 IVGAGPTGLTLAIELARRGVSFRLIEKAP 36
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
18-45 3.46e-03

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 39.23  E-value: 3.46e-03
                          10        20
                  ....*....|....*....|....*...
gi 219895215   18 IIVGAGPSGLAVAACLSNRGVPSVILER 45
Cdd:pfam01494   5 LIVGGGPAGLMLALLLARAGVRVVLVER 32
PRK15317 PRK15317
alkyl hydroperoxide reductase subunit F; Provisional
108-195 3.89e-03

alkyl hydroperoxide reductase subunit F; Provisional


Pssm-ID: 237942 [Multi-domain]  Cd Length: 517  Bit Score: 39.37  E-value: 3.89e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219895215 108 NQTVEKAEfdDASGLWNVKTQDG-VYTSTWLVVATGENAEPVfpNIPGLKKFTGPVVHTSAYKSGSAFANRKVLVVGCGN 186
Cdd:PRK15317 286 LQRASKLE--PAAGLIEVELANGaVLKAKTVILATGARWRNM--NVPGEDEYRNKGVAYCPHCDGPLFKGKRVAVIGGGN 361

                 ....*....
gi 219895215 187 SGMEVSLDL 195
Cdd:PRK15317 362 SGVEAAIDL 370
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
19-47 5.75e-03

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 38.58  E-value: 5.75e-03
                         10        20
                 ....*....|....*....|....*....
gi 219895215  19 IVGAGPSGLAVAACLSNRGVPSVILERTD 47
Cdd:COG0493  126 VVGSGPAGLAAAYQLARAGHEVTVFEALD 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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