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Conserved domains on  [gi|219726468|emb|CAW33720|]
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unnamed protein product [Arabidopsis thaliana]

Protein Classification

SAUR-like auxin-responsive family protein( domain architecture ID 10494974)

SAUR-like auxin-responsive family protein similar to Arabidopsis thaliana SAUR proteins that may provide a mechanistic link between auxin and plasma membrane H+-ATPases (PM H+-ATPases)

Gene Ontology:  GO:0009733

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 46-110 4.62e-19

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


:

Pssm-ID: 460580  Cd Length: 92  Bit Score: 76.14  E-value: 4.62e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 219726468   46 VPKGCVAIMVGHEddeegLHRFVVPLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPCGVDEFKHV 110
Cdd:pfam02519  31 PEKGHFVVYVGDE-----RRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITLPCDVVVFEYL 90
 
Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 46-110 4.62e-19

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 76.14  E-value: 4.62e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 219726468   46 VPKGCVAIMVGHEddeegLHRFVVPLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPCGVDEFKHV 110
Cdd:pfam02519  31 PEKGHFVVYVGDE-----RRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITLPCDVVVFEYL 90
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 45-102 5.42e-14

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 63.25  E-value: 5.42e-14
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 219726468  45 DVPKGCVAIMVGheddeEGLHRFVVPLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPC 102
Cdd:PLN03090  39 DVPKGHFPVYVG-----ENRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDMGLTIPC 91
 
Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 46-110 4.62e-19

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 76.14  E-value: 4.62e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 219726468   46 VPKGCVAIMVGHEddeegLHRFVVPLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPCGVDEFKHV 110
Cdd:pfam02519  31 PEKGHFVVYVGDE-----RRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITLPCDVVVFEYL 90
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 45-102 5.42e-14

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 63.25  E-value: 5.42e-14
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 219726468  45 DVPKGCVAIMVGheddeEGLHRFVVPLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPC 102
Cdd:PLN03090  39 DVPKGHFPVYVG-----ENRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDMGLTIPC 91
PLN03219 PLN03219
uncharacterized protein; Provisional
 46-110 9.37e-13

uncharacterized protein; Provisional


Pssm-ID: 178758 [Multi-domain]  Cd Length: 108  Bit Score: 60.53  E-value: 9.37e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 219726468  46 VPKGCVAIMVGHEDDEEglhRFVVPLVFLSHPLFLDLLKEAEKEYGFKHD-GPITIPCGVDEFKHV 110
Cdd:PLN03219  39 VPKGHVAVYVGEQMEKK---RFVVPISYLNHPLFREFLNRAEEECGFHHSmGGLTIPCREESFLHL 101
PLN03220 PLN03220
uncharacterized protein; Provisional
 46-107 9.66e-13

uncharacterized protein; Provisional


Pssm-ID: 178759  Cd Length: 105  Bit Score: 60.14  E-value: 9.66e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 219726468  46 VPKGCVAIMVGHEDDEEGlHRFVVPLVFLSHPLFLDLLKEAEKEYGFKHD-GPITIPCGVDEF 107
Cdd:PLN03220  35 VPKGHVAVYVGEQIEMEK-KRFVVPISFLNHPSFKEFLSRAEEEFGFNHPmGGLTIPCREEVF 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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