NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|238941767|emb|CAR29940|]
View 

ZYRO0G20592p [Zygosaccharomyces rouxii]

Protein Classification

HbrB domain-containing protein( domain architecture ID 10553986)

HbrB domain-containing protein similar to Saccharomyces cerevisiae target of rapamycin complex 2 subunit BIT61, a component of TORC2, which regulates cell cycle-dependent polarization of the actin-cytoskeleton and cell wall integrity

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
HbrB pfam08539
HbrB-like; HbrB is involved hyphal growth and polarity.
 308-463 1.21e-55

HbrB-like; HbrB is involved hyphal growth and polarity.


:

Pssm-ID: 430059  Cd Length: 159  Bit Score: 183.58  E-value: 1.21e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238941767  308 GNVWGIFCNTVLELFKSHevwQLYVKIEDINRILEFYIILKTESKAasqHNKFLNEVEEFLTTSLYILENQIVFNysnen 387
Cdd:pfam08539   2 DDAWPLLCARVLPLFNGE---DLRVPIEDLNRLVSFHIQLCIQRRA---PNSLLEDLEELLTTGFYTLNNTLSFV----- 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238941767  388 TMNTALKRLGVIWQVFYQQVYYDVMAVLLPLEKSF--------------TTSPKYWSYVEGLSQnVLSVDYILLRSFRDS 453
Cdd:pfam08539  71 PDERLLPRLVEIWLFFYTQVLPYLEAVFLPLDTEFkgrgllmtpeqapaSPSSSSPASVSTLSE-VLDVRRLLLIAFRDS 149

                         170
                  ....*....|
gi 238941767  454 IVLPYYLNFI 463
Cdd:pfam08539 150 VILPRYERLK 159
 
Name Accession Description Interval E-value
HbrB pfam08539
HbrB-like; HbrB is involved hyphal growth and polarity.
 308-463 1.21e-55

HbrB-like; HbrB is involved hyphal growth and polarity.


Pssm-ID: 430059  Cd Length: 159  Bit Score: 183.58  E-value: 1.21e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238941767  308 GNVWGIFCNTVLELFKSHevwQLYVKIEDINRILEFYIILKTESKAasqHNKFLNEVEEFLTTSLYILENQIVFNysnen 387
Cdd:pfam08539   2 DDAWPLLCARVLPLFNGE---DLRVPIEDLNRLVSFHIQLCIQRRA---PNSLLEDLEELLTTGFYTLNNTLSFV----- 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238941767  388 TMNTALKRLGVIWQVFYQQVYYDVMAVLLPLEKSF--------------TTSPKYWSYVEGLSQnVLSVDYILLRSFRDS 453
Cdd:pfam08539  71 PDERLLPRLVEIWLFFYTQVLPYLEAVFLPLDTEFkgrgllmtpeqapaSPSSSSPASVSTLSE-VLDVRRLLLIAFRDS 149

                         170
                  ....*....|
gi 238941767  454 IVLPYYLNFI 463
Cdd:pfam08539 150 VILPRYERLK 159
 
Name Accession Description Interval E-value
HbrB pfam08539
HbrB-like; HbrB is involved hyphal growth and polarity.
 308-463 1.21e-55

HbrB-like; HbrB is involved hyphal growth and polarity.


Pssm-ID: 430059  Cd Length: 159  Bit Score: 183.58  E-value: 1.21e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238941767  308 GNVWGIFCNTVLELFKSHevwQLYVKIEDINRILEFYIILKTESKAasqHNKFLNEVEEFLTTSLYILENQIVFNysnen 387
Cdd:pfam08539   2 DDAWPLLCARVLPLFNGE---DLRVPIEDLNRLVSFHIQLCIQRRA---PNSLLEDLEELLTTGFYTLNNTLSFV----- 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238941767  388 TMNTALKRLGVIWQVFYQQVYYDVMAVLLPLEKSF--------------TTSPKYWSYVEGLSQnVLSVDYILLRSFRDS 453
Cdd:pfam08539  71 PDERLLPRLVEIWLFFYTQVLPYLEAVFLPLDTEFkgrgllmtpeqapaSPSSSSPASVSTLSE-VLDVRRLLLIAFRDS 149

                         170
                  ....*....|
gi 238941767  454 IVLPYYLNFI 463
Cdd:pfam08539 150 VILPRYERLK 159
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH