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Conserved domains on  [gi|2101160459|emb|CAF3446802|]
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unnamed protein product [Fusarium graminearum]

Protein Classification

IPI1/TEX10 family protein( domain architecture ID 12113883)

IPI1/TEX10 family protein similar to human testis-expressed protein 10 (TEX10) that functions as a component of the Five Friends of Methylated CHTOP (5FMC) complex, and Saccharomyces cerevisiae pre-rRNA-processing protein IPI1 that is a component of the RIX1 complex required for processing of ITS2 sequences from 35S pre-rRNA; contains a HEAT repeat domain that may function as a scaffold, anchoring and/or adaptor protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Gcn1_N pfam12074
Generalcontrol nonderepressible 1 (Gcn1) N-terminal; This domain is found in the N-terminal ...
 369-720 9.43e-132

Generalcontrol nonderepressible 1 (Gcn1) N-terminal; This domain is found in the N-terminal region of Gcn1 protein, which acts as a translation activator that mediates translational control by regulating Gcn2 kinase activity.


:

Pssm-ID: 463457  Cd Length: 350  Bit Score: 417.79  E-value: 9.43e-132
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459  369 DHRILHAQMLEATPLSTSSAEQVASAVATVAAKEGNEGALAAETSALANAITFLLVQDGEVPKPVLDSVTKGLAEKKIPS 448
Cdd:pfam12074    1 DHRALHAQMLSALPPSTSVSTKILQGLAPLAAKESNEAALSAETSALCKHLAFLLRSGVEVPKDVVDAFVKGLADKKPPV 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459  449 RKYWLLRVGVILQSLAEAQsVSPGMVTFVEAVVPKMVTTLTEVTANAASAAQSGLVVGAYILTAVSPHIYRLLPGSTAES 528
Cdd:pfam12074   81 RRLWALRVGDLLWNLEDEQ-LSSSVVAFAEAVLPKLEDTFKEVVANPLPAAQSGLVSGAYVATALLLGRLSSSGSSKVAD 159

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459  529 CLTKASVTKQSLSLDPKSSFLLSHRIYSKLTANEDLAWFARALSSVFQSLDQNV-DKHVALAWSEAFIHLVTAHSVPAAI 607
Cdd:pfam12074  160 LLKKASIVKQSLALEPKPSFLLNPKVYTKLTSEEDLLWLLRALAAVASGLKEESsNEAARTAWAQAFIYLICSSNVSPKV 239

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459  608 QQESSKLLSDLYVRNPRLVSSFIINGLWDHLEHSGSGDKEHSATA-----HNLIQVVKSICLtpneiskSGKSVAKEDLE 682
Cdd:pfam12074  240 RREALSALSQLYARNPELVSDIIINGLWSWLLSLETGEKDSAAVSaktgnENLHLVLRAICL-------LGGDVDKEVLE 312

                          330       340       350
                   ....*....|....*....|....*....|....*...
gi 2101160459  683 SQANSLLVLARSELIPRANWIDLCLRMELDPGNLVTKY 720
Cdd:pfam12074  313 KQLVSLLVLARHELIPRASWIDLCLRAGVDPGDLVREH 350
HEAT_EZ pfam13513
HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats ...
 1489-1543 6.63e-07

HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats (see pfam00514). These EZ repeats are found in subunits of cyanobacterial phycocyanin lyase and other proteins and probably carry out a scaffolding role.


:

Pssm-ID: 463906 [Multi-domain]  Cd Length: 55  Bit Score: 48.13  E-value: 6.63e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2101160459 1489 WRSKKGACDLLGAMAYLDPQQLANSLPDIIPPLTGVLNDSHKEVRAAANRSLKRF 1543
Cdd:pfam13513    1 WRVREAAALALGSLAEGGPDLLAPAVPELLPALLPLLNDDSDLVREAAAWALGRL 55
HEAT COG1413
HEAT repeat [General function prediction only];
1427-1566 1.08e-05

HEAT repeat [General function prediction only];


:

Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 47.32  E-value: 1.08e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1427 LGRIFEPyviQIVPQLLTGFGDANANVRdacLAAAKAcfarLSSYGVKKIMPTLLNGLEEQQWRSKKGACDLLGAMAYld 1506
Cdd:COG1413      9 LGRLGDP---AAVPALIAALADEDPDVR---AAAARA----LGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGD-- 76

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1507 pqqlanslPDIIPPLTGVLNDSHKEVRAAANRSLKRFGEvinnpeiKSLVDIILKALSDP 1566
Cdd:COG1413     77 --------PEAVPALIAALKDEDPEVRRAAAEALGRLGD-------PAAVPALLEALKDP 121
HEAT COG1413
HEAT repeat [General function prediction only];
1873-2031 6.83e-04

HEAT repeat [General function prediction only];


:

Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 42.31  E-value: 6.83e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1873 VRSAAIavwkvlvhspRTLKEL-VPTLTQLLIRRLGSSNMEHKVIASNALGELirkaGDgvlSSLLPTLEEGLQTSvDVD 1951
Cdd:COG1413      1 VRRAAA----------RALGRLgDPAAVPALIAALADEDPDVRAAAARALGRL----GD---PRAVPALLEALKDP-DPE 62

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1952 AKQGICLALRELISSASPEALEDhektlisvvrtALTDSDEDVREAAAEAfdslqqiFGKRAVDQVLPFLLNLLRSEDEA 2031
Cdd:COG1413     63 VRAAAAEALGRIGDPEAVPALIA-----------ALKDEDPEVRRAAAEA-------LGRLGDPAAVPALLEALKDPDWE 124
FAD_binding_2 super family cl46878
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 1519-1713 1.07e-03

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


The actual alignment was detected with superfamily member PRK13800:

Pssm-ID: 481218 [Multi-domain]  Cd Length: 897  Bit Score: 44.46  E-value: 1.07e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1519 PPLTGVLNDSHKEVRAAANRSLKRFGEVINNPE------------IKSLVDIILKALS--DPTKYTDEALDSLIKVQFvh 1584
Cdd:PRK13800   655 PALVAALGDGAAAVRRAAAEGLRELVEVLPPAPalrdhlgspdpvVRAAALDVLRALRagDAALFAAALGDPDHRVRI-- 732

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1585 yldAPSLALVTRILQRGLADRSNTKRKAAQVIGSLAHLTEKKDVIMHLPVLVAglklAVVDPVPTTRATASRALGSLvek 1664
Cdd:PRK13800   733 ---EAVRALVSVDDVESVAGAATDENREVRIAVAKGLATLGAGGAPAGDAVRA----LTGDPDPLVRAAALAALAEL--- 802

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 2101160459 1665 lgedTLPDLIPGLMQTLKSDTGAGDRLGSAQALSEVLAGLGTTRLEETL 1713
Cdd:PRK13800   803 ----GCPPDDVAAATAALRASAWQVRQGAARALAGAAADVAVPALVEAL 847
PLN03200 super family cl33659
cellulose synthase-interactive protein; Provisional
 1872-2210 1.99e-03

cellulose synthase-interactive protein; Provisional


The actual alignment was detected with superfamily member PLN03200:

Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 43.94  E-value: 1.99e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1872 AVRSAAIAVWKVLVHSP--RTLKE---LVPTLTQLLirRLGSSNmeHKVIASNALGELIRKAGDGVLSSLLPTLEEGLQT 1946
Cdd:PLN03200   504 AKEDSATVLWNLCCHSEdiRACVEsagAVPALLWLL--KNGGPK--GQEIAAKTLTKLVRTADAATISQLTALLLGDLPE 579

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1947 SvdvdaKQGICLALRELISSASPEALEDHE-------KTLISVvrtaLTDSDEDVREAAAEA----FDSLQQIFGKRAVD 2015
Cdd:PLN03200   580 S-----KVHVLDVLGHVLSVASLEDLVREGsaandalRTLIQL----LSSSKEETQEKAASVladiFSSRQDLCESLATD 650

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 2016 QVLPFLLNLLRSEDEAdNALQAlltlltettrsniilpnliptlttppissfdAKALASLS-------KVAGPAMNRRLP 2088
Cdd:PLN03200   651 EIINPCIKLLTNNTEA-VATQS-------------------------------ARALAALSrsikenrKVSYAAEDAIKP 698

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 2089 NII------------------NSLMDNEIncKEDGLREELATSFDTVIQSIDEyDGLNTVMNVLLQLLKH-------EDH 2143
Cdd:PLN03200   699 LIKlaksssievaeqavcalaNLLSDPEV--AAEALAEDIILPLTRVLREGTL-EGKRNAARALAQLLKHfpvddvlKDS 775

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2101160459 2144 RRRAATAYHMANFFAAASVDYSRYSQ--DIIRSLLNSfdDRDDGVVKAAWAALSAFtkklrKEEMESLV 2210
Cdd:PLN03200   776 VQCRGTVLALVDLLNSTDLDSSATSEalEALALLART--KGGANFSHPPWAVLAEV-----PSSLEPLV 837
 
Name Accession Description Interval E-value
Gcn1_N pfam12074
Generalcontrol nonderepressible 1 (Gcn1) N-terminal; This domain is found in the N-terminal ...
 369-720 9.43e-132

Generalcontrol nonderepressible 1 (Gcn1) N-terminal; This domain is found in the N-terminal region of Gcn1 protein, which acts as a translation activator that mediates translational control by regulating Gcn2 kinase activity.


Pssm-ID: 463457  Cd Length: 350  Bit Score: 417.79  E-value: 9.43e-132
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459  369 DHRILHAQMLEATPLSTSSAEQVASAVATVAAKEGNEGALAAETSALANAITFLLVQDGEVPKPVLDSVTKGLAEKKIPS 448
Cdd:pfam12074    1 DHRALHAQMLSALPPSTSVSTKILQGLAPLAAKESNEAALSAETSALCKHLAFLLRSGVEVPKDVVDAFVKGLADKKPPV 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459  449 RKYWLLRVGVILQSLAEAQsVSPGMVTFVEAVVPKMVTTLTEVTANAASAAQSGLVVGAYILTAVSPHIYRLLPGSTAES 528
Cdd:pfam12074   81 RRLWALRVGDLLWNLEDEQ-LSSSVVAFAEAVLPKLEDTFKEVVANPLPAAQSGLVSGAYVATALLLGRLSSSGSSKVAD 159

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459  529 CLTKASVTKQSLSLDPKSSFLLSHRIYSKLTANEDLAWFARALSSVFQSLDQNV-DKHVALAWSEAFIHLVTAHSVPAAI 607
Cdd:pfam12074  160 LLKKASIVKQSLALEPKPSFLLNPKVYTKLTSEEDLLWLLRALAAVASGLKEESsNEAARTAWAQAFIYLICSSNVSPKV 239

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459  608 QQESSKLLSDLYVRNPRLVSSFIINGLWDHLEHSGSGDKEHSATA-----HNLIQVVKSICLtpneiskSGKSVAKEDLE 682
Cdd:pfam12074  240 RREALSALSQLYARNPELVSDIIINGLWSWLLSLETGEKDSAAVSaktgnENLHLVLRAICL-------LGGDVDKEVLE 312

                          330       340       350
                   ....*....|....*....|....*....|....*...
gi 2101160459  683 SQANSLLVLARSELIPRANWIDLCLRMELDPGNLVTKY 720
Cdd:pfam12074  313 KQLVSLLVLARHELIPRASWIDLCLRAGVDPGDLVREH 350
HEAT_EZ pfam13513
HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats ...
 1489-1543 6.63e-07

HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats (see pfam00514). These EZ repeats are found in subunits of cyanobacterial phycocyanin lyase and other proteins and probably carry out a scaffolding role.


Pssm-ID: 463906 [Multi-domain]  Cd Length: 55  Bit Score: 48.13  E-value: 6.63e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2101160459 1489 WRSKKGACDLLGAMAYLDPQQLANSLPDIIPPLTGVLNDSHKEVRAAANRSLKRF 1543
Cdd:pfam13513    1 WRVREAAALALGSLAEGGPDLLAPAVPELLPALLPLLNDDSDLVREAAAWALGRL 55
HEAT COG1413
HEAT repeat [General function prediction only];
1427-1566 1.08e-05

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 47.32  E-value: 1.08e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1427 LGRIFEPyviQIVPQLLTGFGDANANVRdacLAAAKAcfarLSSYGVKKIMPTLLNGLEEQQWRSKKGACDLLGAMAYld 1506
Cdd:COG1413      9 LGRLGDP---AAVPALIAALADEDPDVR---AAAARA----LGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGD-- 76

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1507 pqqlanslPDIIPPLTGVLNDSHKEVRAAANRSLKRFGEvinnpeiKSLVDIILKALSDP 1566
Cdd:COG1413     77 --------PEAVPALIAALKDEDPEVRRAAAEALGRLGD-------PAAVPALLEALKDP 121
HEAT COG1413
HEAT repeat [General function prediction only];
1873-2031 6.83e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 42.31  E-value: 6.83e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1873 VRSAAIavwkvlvhspRTLKEL-VPTLTQLLIRRLGSSNMEHKVIASNALGELirkaGDgvlSSLLPTLEEGLQTSvDVD 1951
Cdd:COG1413      1 VRRAAA----------RALGRLgDPAAVPALIAALADEDPDVRAAAARALGRL----GD---PRAVPALLEALKDP-DPE 62

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1952 AKQGICLALRELISSASPEALEDhektlisvvrtALTDSDEDVREAAAEAfdslqqiFGKRAVDQVLPFLLNLLRSEDEA 2031
Cdd:COG1413     63 VRAAAAEALGRIGDPEAVPALIA-----------ALKDEDPEVRRAAAEA-------LGRLGDPAAVPALLEALKDPDWE 124
PRK13800 PRK13800
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
1519-1713 1.07e-03

fumarate reductase/succinate dehydrogenase flavoprotein subunit;


Pssm-ID: 237512 [Multi-domain]  Cd Length: 897  Bit Score: 44.46  E-value: 1.07e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1519 PPLTGVLNDSHKEVRAAANRSLKRFGEVINNPE------------IKSLVDIILKALS--DPTKYTDEALDSLIKVQFvh 1584
Cdd:PRK13800   655 PALVAALGDGAAAVRRAAAEGLRELVEVLPPAPalrdhlgspdpvVRAAALDVLRALRagDAALFAAALGDPDHRVRI-- 732

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1585 yldAPSLALVTRILQRGLADRSNTKRKAAQVIGSLAHLTEKKDVIMHLPVLVAglklAVVDPVPTTRATASRALGSLvek 1664
Cdd:PRK13800   733 ---EAVRALVSVDDVESVAGAATDENREVRIAVAKGLATLGAGGAPAGDAVRA----LTGDPDPLVRAAALAALAEL--- 802

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 2101160459 1665 lgedTLPDLIPGLMQTLKSDTGAGDRLGSAQALSEVLAGLGTTRLEETL 1713
Cdd:PRK13800   803 ----GCPPDDVAAATAALRASAWQVRQGAARALAGAAADVAVPALVEAL 847
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 1872-2210 1.99e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 43.94  E-value: 1.99e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1872 AVRSAAIAVWKVLVHSP--RTLKE---LVPTLTQLLirRLGSSNmeHKVIASNALGELIRKAGDGVLSSLLPTLEEGLQT 1946
Cdd:PLN03200   504 AKEDSATVLWNLCCHSEdiRACVEsagAVPALLWLL--KNGGPK--GQEIAAKTLTKLVRTADAATISQLTALLLGDLPE 579

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1947 SvdvdaKQGICLALRELISSASPEALEDHE-------KTLISVvrtaLTDSDEDVREAAAEA----FDSLQQIFGKRAVD 2015
Cdd:PLN03200   580 S-----KVHVLDVLGHVLSVASLEDLVREGsaandalRTLIQL----LSSSKEETQEKAASVladiFSSRQDLCESLATD 650

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 2016 QVLPFLLNLLRSEDEAdNALQAlltlltettrsniilpnliptlttppissfdAKALASLS-------KVAGPAMNRRLP 2088
Cdd:PLN03200   651 EIINPCIKLLTNNTEA-VATQS-------------------------------ARALAALSrsikenrKVSYAAEDAIKP 698

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 2089 NII------------------NSLMDNEIncKEDGLREELATSFDTVIQSIDEyDGLNTVMNVLLQLLKH-------EDH 2143
Cdd:PLN03200   699 LIKlaksssievaeqavcalaNLLSDPEV--AAEALAEDIILPLTRVLREGTL-EGKRNAARALAQLLKHfpvddvlKDS 775

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2101160459 2144 RRRAATAYHMANFFAAASVDYSRYSQ--DIIRSLLNSfdDRDDGVVKAAWAALSAFtkklrKEEMESLV 2210
Cdd:PLN03200   776 VQCRGTVLALVDLLNSTDLDSSATSEalEALALLART--KGGANFSHPPWAVLAEV-----PSSLEPLV 837
PRK13800 PRK13800
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
1672-2001 2.53e-03

fumarate reductase/succinate dehydrogenase flavoprotein subunit;


Pssm-ID: 237512 [Multi-domain]  Cd Length: 897  Bit Score: 43.30  E-value: 2.53e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1672 DLIPGLMQTLKSDTGAGDRLGSAQALSEVLAGLGTTRLEETLPTILQNVESSKPAV---------------REGFMSLFI 1736
Cdd:PRK13800   568 DDLPPVDRTVVPVGQPPLHGGRAPAEGVSRAAAPATAPEPPSPRILAVLALDAPSVaelapyladpdpgvrRTAVAVLTE 647

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1737 FLPVCFGnsfsnylgrivPPILAGLADDIESIRETALRAGRLLVKNFA-----------------ARAVDLLL------P 1793
Cdd:PRK13800   648 TTPPGFG-----------PALVAALGDGAAAVRRAAAEGLRELVEVLPpapalrdhlgspdpvvrAAALDVLRalragdA 716

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1794 EL-ERGLADDSYRIRLSSVElvgdllfNLTGIKAGTEAEDIEEDEN--IKEAGASLKETLGeDKRNKILSALYVCRCDTA 1870
Cdd:PRK13800   717 ALfAAALGDPDHRVRIEAVR-------ALVSVDDVESVAGAATDENreVRIAVAKGLATLG-AGGAPAGDAVRALTGDPD 788

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1871 GAVRSAAIAVWKVLvhsprtlkELVPTLTQLLIRRLGSSNMEHKVIASNALGELIRKAGDGVLSSLLptleeglqTSVDV 1950
Cdd:PRK13800   789 PLVRAAALAALAEL--------GCPPDDVAAATAALRASAWQVRQGAARALAGAAADVAVPALVEAL--------TDPHL 852

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2101160459 1951 DAKQGICLALRELisSASPEALEdhektlisVVRTALTDSDEDVREAAAEA 2001
Cdd:PRK13800   853 DVRKAAVLALTRW--PGDPAARD--------ALTTALTDSDADVRAYARRA 893
 
Name Accession Description Interval E-value
Gcn1_N pfam12074
Generalcontrol nonderepressible 1 (Gcn1) N-terminal; This domain is found in the N-terminal ...
 369-720 9.43e-132

Generalcontrol nonderepressible 1 (Gcn1) N-terminal; This domain is found in the N-terminal region of Gcn1 protein, which acts as a translation activator that mediates translational control by regulating Gcn2 kinase activity.


Pssm-ID: 463457  Cd Length: 350  Bit Score: 417.79  E-value: 9.43e-132
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459  369 DHRILHAQMLEATPLSTSSAEQVASAVATVAAKEGNEGALAAETSALANAITFLLVQDGEVPKPVLDSVTKGLAEKKIPS 448
Cdd:pfam12074    1 DHRALHAQMLSALPPSTSVSTKILQGLAPLAAKESNEAALSAETSALCKHLAFLLRSGVEVPKDVVDAFVKGLADKKPPV 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459  449 RKYWLLRVGVILQSLAEAQsVSPGMVTFVEAVVPKMVTTLTEVTANAASAAQSGLVVGAYILTAVSPHIYRLLPGSTAES 528
Cdd:pfam12074   81 RRLWALRVGDLLWNLEDEQ-LSSSVVAFAEAVLPKLEDTFKEVVANPLPAAQSGLVSGAYVATALLLGRLSSSGSSKVAD 159

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459  529 CLTKASVTKQSLSLDPKSSFLLSHRIYSKLTANEDLAWFARALSSVFQSLDQNV-DKHVALAWSEAFIHLVTAHSVPAAI 607
Cdd:pfam12074  160 LLKKASIVKQSLALEPKPSFLLNPKVYTKLTSEEDLLWLLRALAAVASGLKEESsNEAARTAWAQAFIYLICSSNVSPKV 239

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459  608 QQESSKLLSDLYVRNPRLVSSFIINGLWDHLEHSGSGDKEHSATA-----HNLIQVVKSICLtpneiskSGKSVAKEDLE 682
Cdd:pfam12074  240 RREALSALSQLYARNPELVSDIIINGLWSWLLSLETGEKDSAAVSaktgnENLHLVLRAICL-------LGGDVDKEVLE 312

                          330       340       350
                   ....*....|....*....|....*....|....*...
gi 2101160459  683 SQANSLLVLARSELIPRANWIDLCLRMELDPGNLVTKY 720
Cdd:pfam12074  313 KQLVSLLVLARHELIPRASWIDLCLRAGVDPGDLVREH 350
HEAT_EZ pfam13513
HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats ...
 1489-1543 6.63e-07

HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats (see pfam00514). These EZ repeats are found in subunits of cyanobacterial phycocyanin lyase and other proteins and probably carry out a scaffolding role.


Pssm-ID: 463906 [Multi-domain]  Cd Length: 55  Bit Score: 48.13  E-value: 6.63e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2101160459 1489 WRSKKGACDLLGAMAYLDPQQLANSLPDIIPPLTGVLNDSHKEVRAAANRSLKRF 1543
Cdd:pfam13513    1 WRVREAAALALGSLAEGGPDLLAPAVPELLPALLPLLNDDSDLVREAAAWALGRL 55
HEAT COG1413
HEAT repeat [General function prediction only];
1427-1566 1.08e-05

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 47.32  E-value: 1.08e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1427 LGRIFEPyviQIVPQLLTGFGDANANVRdacLAAAKAcfarLSSYGVKKIMPTLLNGLEEQQWRSKKGACDLLGAMAYld 1506
Cdd:COG1413      9 LGRLGDP---AAVPALIAALADEDPDVR---AAAARA----LGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGD-- 76

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1507 pqqlanslPDIIPPLTGVLNDSHKEVRAAANRSLKRFGEvinnpeiKSLVDIILKALSDP 1566
Cdd:COG1413     77 --------PEAVPALIAALKDEDPEVRRAAAEALGRLGD-------PAAVPALLEALKDP 121
HEAT COG1413
HEAT repeat [General function prediction only];
1427-1544 1.38e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 44.23  E-value: 1.38e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1427 LGRIFEPyviQIVPQLLTGFGDANANVRDACLAAakacfarLSSYGVKKIMPTLLNGLEEQQWRSKKGACDLLGAMAYld 1506
Cdd:COG1413     40 LGRLGDP---RAVPALLEALKDPDPEVRAAAAEA-------LGRIGDPEAVPALIAALKDEDPEVRRAAAEALGRLGD-- 107

                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 2101160459 1507 pqqlanslPDIIPPLTGVLNDSHKEVRAAANRSLKRFG 1544
Cdd:COG1413    108 --------PAAVPALLEALKDPDWEVRRAAARALGRLG 137
HEAT COG1413
HEAT repeat [General function prediction only];
1873-2031 6.83e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 42.31  E-value: 6.83e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1873 VRSAAIavwkvlvhspRTLKEL-VPTLTQLLIRRLGSSNMEHKVIASNALGELirkaGDgvlSSLLPTLEEGLQTSvDVD 1951
Cdd:COG1413      1 VRRAAA----------RALGRLgDPAAVPALIAALADEDPDVRAAAARALGRL----GD---PRAVPALLEALKDP-DPE 62

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1952 AKQGICLALRELISSASPEALEDhektlisvvrtALTDSDEDVREAAAEAfdslqqiFGKRAVDQVLPFLLNLLRSEDEA 2031
Cdd:COG1413     63 VRAAAAEALGRIGDPEAVPALIA-----------ALKDEDPEVRRAAAEA-------LGRLGDPAAVPALLEALKDPDWE 124
PRK13800 PRK13800
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
1519-1713 1.07e-03

fumarate reductase/succinate dehydrogenase flavoprotein subunit;


Pssm-ID: 237512 [Multi-domain]  Cd Length: 897  Bit Score: 44.46  E-value: 1.07e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1519 PPLTGVLNDSHKEVRAAANRSLKRFGEVINNPE------------IKSLVDIILKALS--DPTKYTDEALDSLIKVQFvh 1584
Cdd:PRK13800   655 PALVAALGDGAAAVRRAAAEGLRELVEVLPPAPalrdhlgspdpvVRAAALDVLRALRagDAALFAAALGDPDHRVRI-- 732

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1585 yldAPSLALVTRILQRGLADRSNTKRKAAQVIGSLAHLTEKKDVIMHLPVLVAglklAVVDPVPTTRATASRALGSLvek 1664
Cdd:PRK13800   733 ---EAVRALVSVDDVESVAGAATDENREVRIAVAKGLATLGAGGAPAGDAVRA----LTGDPDPLVRAAALAALAEL--- 802

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 2101160459 1665 lgedTLPDLIPGLMQTLKSDTGAGDRLGSAQALSEVLAGLGTTRLEETL 1713
Cdd:PRK13800   803 ----GCPPDDVAAATAALRASAWQVRQGAARALAGAAADVAVPALVEAL 847
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 1872-2210 1.99e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 43.94  E-value: 1.99e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1872 AVRSAAIAVWKVLVHSP--RTLKE---LVPTLTQLLirRLGSSNmeHKVIASNALGELIRKAGDGVLSSLLPTLEEGLQT 1946
Cdd:PLN03200   504 AKEDSATVLWNLCCHSEdiRACVEsagAVPALLWLL--KNGGPK--GQEIAAKTLTKLVRTADAATISQLTALLLGDLPE 579

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1947 SvdvdaKQGICLALRELISSASPEALEDHE-------KTLISVvrtaLTDSDEDVREAAAEA----FDSLQQIFGKRAVD 2015
Cdd:PLN03200   580 S-----KVHVLDVLGHVLSVASLEDLVREGsaandalRTLIQL----LSSSKEETQEKAASVladiFSSRQDLCESLATD 650

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 2016 QVLPFLLNLLRSEDEAdNALQAlltlltettrsniilpnliptlttppissfdAKALASLS-------KVAGPAMNRRLP 2088
Cdd:PLN03200   651 EIINPCIKLLTNNTEA-VATQS-------------------------------ARALAALSrsikenrKVSYAAEDAIKP 698

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 2089 NII------------------NSLMDNEIncKEDGLREELATSFDTVIQSIDEyDGLNTVMNVLLQLLKH-------EDH 2143
Cdd:PLN03200   699 LIKlaksssievaeqavcalaNLLSDPEV--AAEALAEDIILPLTRVLREGTL-EGKRNAARALAQLLKHfpvddvlKDS 775

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2101160459 2144 RRRAATAYHMANFFAAASVDYSRYSQ--DIIRSLLNSfdDRDDGVVKAAWAALSAFtkklrKEEMESLV 2210
Cdd:PLN03200   776 VQCRGTVLALVDLLNSTDLDSSATSEalEALALLART--KGGANFSHPPWAVLAEV-----PSSLEPLV 837
PRK13800 PRK13800
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
1672-2001 2.53e-03

fumarate reductase/succinate dehydrogenase flavoprotein subunit;


Pssm-ID: 237512 [Multi-domain]  Cd Length: 897  Bit Score: 43.30  E-value: 2.53e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1672 DLIPGLMQTLKSDTGAGDRLGSAQALSEVLAGLGTTRLEETLPTILQNVESSKPAV---------------REGFMSLFI 1736
Cdd:PRK13800   568 DDLPPVDRTVVPVGQPPLHGGRAPAEGVSRAAAPATAPEPPSPRILAVLALDAPSVaelapyladpdpgvrRTAVAVLTE 647

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1737 FLPVCFGnsfsnylgrivPPILAGLADDIESIRETALRAGRLLVKNFA-----------------ARAVDLLL------P 1793
Cdd:PRK13800   648 TTPPGFG-----------PALVAALGDGAAAVRRAAAEGLRELVEVLPpapalrdhlgspdpvvrAAALDVLRalragdA 716

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1794 EL-ERGLADDSYRIRLSSVElvgdllfNLTGIKAGTEAEDIEEDEN--IKEAGASLKETLGeDKRNKILSALYVCRCDTA 1870
Cdd:PRK13800   717 ALfAAALGDPDHRVRIEAVR-------ALVSVDDVESVAGAATDENreVRIAVAKGLATLG-AGGAPAGDAVRALTGDPD 788

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2101160459 1871 GAVRSAAIAVWKVLvhsprtlkELVPTLTQLLIRRLGSSNMEHKVIASNALGELIRKAGDGVLSSLLptleeglqTSVDV 1950
Cdd:PRK13800   789 PLVRAAALAALAEL--------GCPPDDVAAATAALRASAWQVRQGAARALAGAAADVAVPALVEAL--------TDPHL 852

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2101160459 1951 DAKQGICLALRELisSASPEALEdhektlisVVRTALTDSDEDVREAAAEA 2001
Cdd:PRK13800   853 DVRKAAVLALTRW--PGDPAARD--------ALTTALTDSDADVRAYARRA 893
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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