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Conserved domains on  [gi|31873866|emb|CAD97870|]
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hypothetical protein [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF5565 pfam17720
Family of unknown function (DUF5565); This is a family of unknown function found in bacteria ...
1-324 0e+00

Family of unknown function (DUF5565); This is a family of unknown function found in bacteria and eukaryotes.


:

Pssm-ID: 407596  Cd Length: 324  Bit Score: 649.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31873866     1 MKRLGSVQRKMPCVFVTEVKEEPSSKREHQPFKVLATETVSHKALDADIYSAIPTEKVDGTCCYVTTYKDQPYLWARLDR 80
Cdd:pfam17720   1 MRRLGSVQQKIPCVFVTEVKEEPSRKRDCQPFQVLATETVNPKALEADVHNAIATEKVDGTCCYVTTYKGKPYLWARLDR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31873866    81 KPNKQAEKRFKNFLHSKENPKEFFWNVEEDFKPAPECWIPAKETEQINGNPVPDENGHIPGWVPVEKNNKQYCWHSSVVN 160
Cdd:pfam17720  81 KPNKQAEKRFKKFQHSHKSCKGFTWNVEEDFKAVPESWIPAHGVKHHNGHPLPDEHGHIPGWVPVEKNNKQYCWHSSVVD 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31873866   161 YEFEIALVLKHHPDDSGLLEISAVPLSDLLEQTLELIGTNINGNPYGLGSKKHPLHLLIPHGAFQIRNLPSLKHNDLLSW 240
Cdd:pfam17720 161 YEAGVALVLRPSAEDEGLLEITPVPLSDLLEQTLELIGTNINGNPYGLGSKKHPVHLLVPHGALRIRNPPPVDFQQLLSW 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31873866   241 FEDCKEGKIEGIVWHCSDGCLIKVHRHHLGLCWPIPDTYMNSRPVIINMNLNKCDSAFDIKCLFNHFLKIDNQKFVRLKD 320
Cdd:pfam17720 241 FQECPEGKVEGIVWHCNDGTLIKLHRHHLGLKWPVGDTYLNSRPVVVNVDLNQYEWDFEPKSLFALFSKLNGQRFSRLRD 320

                  ....
gi 31873866   321 IIFD 324
Cdd:pfam17720 321 IQFD 324
 
Name Accession Description Interval E-value
DUF5565 pfam17720
Family of unknown function (DUF5565); This is a family of unknown function found in bacteria ...
1-324 0e+00

Family of unknown function (DUF5565); This is a family of unknown function found in bacteria and eukaryotes.


Pssm-ID: 407596  Cd Length: 324  Bit Score: 649.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31873866     1 MKRLGSVQRKMPCVFVTEVKEEPSSKREHQPFKVLATETVSHKALDADIYSAIPTEKVDGTCCYVTTYKDQPYLWARLDR 80
Cdd:pfam17720   1 MRRLGSVQQKIPCVFVTEVKEEPSRKRDCQPFQVLATETVNPKALEADVHNAIATEKVDGTCCYVTTYKGKPYLWARLDR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31873866    81 KPNKQAEKRFKNFLHSKENPKEFFWNVEEDFKPAPECWIPAKETEQINGNPVPDENGHIPGWVPVEKNNKQYCWHSSVVN 160
Cdd:pfam17720  81 KPNKQAEKRFKKFQHSHKSCKGFTWNVEEDFKAVPESWIPAHGVKHHNGHPLPDEHGHIPGWVPVEKNNKQYCWHSSVVD 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31873866   161 YEFEIALVLKHHPDDSGLLEISAVPLSDLLEQTLELIGTNINGNPYGLGSKKHPLHLLIPHGAFQIRNLPSLKHNDLLSW 240
Cdd:pfam17720 161 YEAGVALVLRPSAEDEGLLEITPVPLSDLLEQTLELIGTNINGNPYGLGSKKHPVHLLVPHGALRIRNPPPVDFQQLLSW 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31873866   241 FEDCKEGKIEGIVWHCSDGCLIKVHRHHLGLCWPIPDTYMNSRPVIINMNLNKCDSAFDIKCLFNHFLKIDNQKFVRLKD 320
Cdd:pfam17720 241 FQECPEGKVEGIVWHCNDGTLIKLHRHHLGLKWPVGDTYLNSRPVVVNVDLNQYEWDFEPKSLFALFSKLNGQRFSRLRD 320

                  ....
gi 31873866   321 IIFD 324
Cdd:pfam17720 321 IQFD 324
 
Name Accession Description Interval E-value
DUF5565 pfam17720
Family of unknown function (DUF5565); This is a family of unknown function found in bacteria ...
1-324 0e+00

Family of unknown function (DUF5565); This is a family of unknown function found in bacteria and eukaryotes.


Pssm-ID: 407596  Cd Length: 324  Bit Score: 649.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31873866     1 MKRLGSVQRKMPCVFVTEVKEEPSSKREHQPFKVLATETVSHKALDADIYSAIPTEKVDGTCCYVTTYKDQPYLWARLDR 80
Cdd:pfam17720   1 MRRLGSVQQKIPCVFVTEVKEEPSRKRDCQPFQVLATETVNPKALEADVHNAIATEKVDGTCCYVTTYKGKPYLWARLDR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31873866    81 KPNKQAEKRFKNFLHSKENPKEFFWNVEEDFKPAPECWIPAKETEQINGNPVPDENGHIPGWVPVEKNNKQYCWHSSVVN 160
Cdd:pfam17720  81 KPNKQAEKRFKKFQHSHKSCKGFTWNVEEDFKAVPESWIPAHGVKHHNGHPLPDEHGHIPGWVPVEKNNKQYCWHSSVVD 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31873866   161 YEFEIALVLKHHPDDSGLLEISAVPLSDLLEQTLELIGTNINGNPYGLGSKKHPLHLLIPHGAFQIRNLPSLKHNDLLSW 240
Cdd:pfam17720 161 YEAGVALVLRPSAEDEGLLEITPVPLSDLLEQTLELIGTNINGNPYGLGSKKHPVHLLVPHGALRIRNPPPVDFQQLLSW 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31873866   241 FEDCKEGKIEGIVWHCSDGCLIKVHRHHLGLCWPIPDTYMNSRPVIINMNLNKCDSAFDIKCLFNHFLKIDNQKFVRLKD 320
Cdd:pfam17720 241 FQECPEGKVEGIVWHCNDGTLIKLHRHHLGLKWPVGDTYLNSRPVVVNVDLNQYEWDFEPKSLFALFSKLNGQRFSRLRD 320

                  ....
gi 31873866   321 IIFD 324
Cdd:pfam17720 321 IQFD 324
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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