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Conserved domains on  [gi|7406458|emb|CAB85560|]
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putative protein [Arabidopsis thaliana]

Protein Classification

DUF668 and DUF3475 domain-containing protein( domain architecture ID 10571731)

DUF668 and DUF3475 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF668 pfam05003
Protein of unknown function (DUF668); This entry represents the C-terminal domain of PSI ...
 432-523 2.37e-46

Protein of unknown function (DUF668); This entry represents the C-terminal domain of PSI proteins from Arabidopsis. This domain is found associated with pfam11961. PSI1 was identified as a gene that is co-expressed with the phytosulfokine (PSK) receptor genes PSKR1 and PSKR2 in Arabidopsis thaliana. PSI proteins are plant-specific and promote growth.


:

Pssm-ID: 428251  Cd Length: 88  Bit Score: 157.72  E-value: 2.37e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7406458    432 TLGTACLALHYANVIIVIERFVASPHLIGDDARDDLYNMLPASVRTSLRERLKPYSKNLSsstvYDPGLAREWTDAMAGI 511
Cdd:pfam05003   1 TLGGAGLALHYANVIIQIEKLLSRPHLIPPNARDDLYQMLPPSIRSALRAKLRSYWKKLG----YDELLAAEWKAAMEKI 76

                          90
                  ....*....|..
gi 7406458    512 LEWLGPLAHNMI 523
Cdd:pfam05003  77 LEWLVPLAHNTI 88
DUF3475 pfam11961
Domain of unknown function (DUF3475); This entry represents the N-terminal domain of PSI ...
 28-84 5.01e-25

Domain of unknown function (DUF3475); This entry represents the N-terminal domain of PSI proteins from Arabidopsis. This domain is found associated with pfam05003. PSI1 was identified as a gene that is co-expressed with the phytosulfokine (PSK) receptor genes PSKR1 and PSKR2 in Arabidopsis thaliana. PSI proteins are plant-specific and promote growth.


:

Pssm-ID: 432223  Cd Length: 57  Bit Score: 97.96  E-value: 5.01e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 7406458     28 VLAFEVASLLSKLVHLWQSLSDKNVARLRDEITHSTGIKKLVSEDDDFIVRLIRDEM 84
Cdd:pfam11961   1 ILAFEVANTMSKLVHLWQSLSDKEVARLREEILRSEGVRKLVSDDESFLLRLACAEK 57
 
Name Accession Description Interval E-value
DUF668 pfam05003
Protein of unknown function (DUF668); This entry represents the C-terminal domain of PSI ...
 432-523 2.37e-46

Protein of unknown function (DUF668); This entry represents the C-terminal domain of PSI proteins from Arabidopsis. This domain is found associated with pfam11961. PSI1 was identified as a gene that is co-expressed with the phytosulfokine (PSK) receptor genes PSKR1 and PSKR2 in Arabidopsis thaliana. PSI proteins are plant-specific and promote growth.


Pssm-ID: 428251  Cd Length: 88  Bit Score: 157.72  E-value: 2.37e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7406458    432 TLGTACLALHYANVIIVIERFVASPHLIGDDARDDLYNMLPASVRTSLRERLKPYSKNLSsstvYDPGLAREWTDAMAGI 511
Cdd:pfam05003   1 TLGGAGLALHYANVIIQIEKLLSRPHLIPPNARDDLYQMLPPSIRSALRAKLRSYWKKLG----YDELLAAEWKAAMEKI 76

                          90
                  ....*....|..
gi 7406458    512 LEWLGPLAHNMI 523
Cdd:pfam05003  77 LEWLVPLAHNTI 88
DUF3475 pfam11961
Domain of unknown function (DUF3475); This entry represents the N-terminal domain of PSI ...
 28-84 5.01e-25

Domain of unknown function (DUF3475); This entry represents the N-terminal domain of PSI proteins from Arabidopsis. This domain is found associated with pfam05003. PSI1 was identified as a gene that is co-expressed with the phytosulfokine (PSK) receptor genes PSKR1 and PSKR2 in Arabidopsis thaliana. PSI proteins are plant-specific and promote growth.


Pssm-ID: 432223  Cd Length: 57  Bit Score: 97.96  E-value: 5.01e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 7406458     28 VLAFEVASLLSKLVHLWQSLSDKNVARLRDEITHSTGIKKLVSEDDDFIVRLIRDEM 84
Cdd:pfam11961   1 ILAFEVANTMSKLVHLWQSLSDKEVARLREEILRSEGVRKLVSDDESFLLRLACAEK 57
 
Name Accession Description Interval E-value
DUF668 pfam05003
Protein of unknown function (DUF668); This entry represents the C-terminal domain of PSI ...
 432-523 2.37e-46

Protein of unknown function (DUF668); This entry represents the C-terminal domain of PSI proteins from Arabidopsis. This domain is found associated with pfam11961. PSI1 was identified as a gene that is co-expressed with the phytosulfokine (PSK) receptor genes PSKR1 and PSKR2 in Arabidopsis thaliana. PSI proteins are plant-specific and promote growth.


Pssm-ID: 428251  Cd Length: 88  Bit Score: 157.72  E-value: 2.37e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7406458    432 TLGTACLALHYANVIIVIERFVASPHLIGDDARDDLYNMLPASVRTSLRERLKPYSKNLSsstvYDPGLAREWTDAMAGI 511
Cdd:pfam05003   1 TLGGAGLALHYANVIIQIEKLLSRPHLIPPNARDDLYQMLPPSIRSALRAKLRSYWKKLG----YDELLAAEWKAAMEKI 76

                          90
                  ....*....|..
gi 7406458    512 LEWLGPLAHNMI 523
Cdd:pfam05003  77 LEWLVPLAHNTI 88
DUF3475 pfam11961
Domain of unknown function (DUF3475); This entry represents the N-terminal domain of PSI ...
 28-84 5.01e-25

Domain of unknown function (DUF3475); This entry represents the N-terminal domain of PSI proteins from Arabidopsis. This domain is found associated with pfam05003. PSI1 was identified as a gene that is co-expressed with the phytosulfokine (PSK) receptor genes PSKR1 and PSKR2 in Arabidopsis thaliana. PSI proteins are plant-specific and promote growth.


Pssm-ID: 432223  Cd Length: 57  Bit Score: 97.96  E-value: 5.01e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 7406458     28 VLAFEVASLLSKLVHLWQSLSDKNVARLRDEITHSTGIKKLVSEDDDFIVRLIRDEM 84
Cdd:pfam11961   1 ILAFEVANTMSKLVHLWQSLSDKEVARLREEILRSEGVRKLVSDDESFLLRLACAEK 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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