NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|3169077|emb|CAA19271|]
View 

unconventional prefoldin chaperone involved protein complex assembly Uri1 [Schizosaccharomyces pombe]

Protein Classification

DUF3835 domain-containing protein( domain architecture ID 10584194)

DUF3835 domain-containing protein similar to Schizosaccharomyces pombe protein C736.07c

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF3835 pfam12927
Domain of unknown function (DUF3835); This is a C-terminal domain conserved in fungi.
 613-688 1.26e-15

Domain of unknown function (DUF3835); This is a C-terminal domain conserved in fungi.


:

Pssm-ID: 463753  Cd Length: 73  Bit Score: 71.84  E-value: 1.26e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 3169077    613 VVERTPSDkiSESKEAFDaKVEEISDQRAISQRYYELRKKMIDNTGEYIKDEEEQAVIPLDENGNEKpKMSRFMTA 688
Cdd:pfam12927   2 VVERDIPE--AAAPPDPD-ELDEELLRREVATEYHRLRNRMIQQQGGFLKSDEELEIEPIDEDGNPK-KVSRFKAA 73
 
Name Accession Description Interval E-value
DUF3835 pfam12927
Domain of unknown function (DUF3835); This is a C-terminal domain conserved in fungi.
 613-688 1.26e-15

Domain of unknown function (DUF3835); This is a C-terminal domain conserved in fungi.


Pssm-ID: 463753  Cd Length: 73  Bit Score: 71.84  E-value: 1.26e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 3169077    613 VVERTPSDkiSESKEAFDaKVEEISDQRAISQRYYELRKKMIDNTGEYIKDEEEQAVIPLDENGNEKpKMSRFMTA 688
Cdd:pfam12927   2 VVERDIPE--AAAPPDPD-ELDEELLRREVATEYHRLRNRMIQQQGGFLKSDEELEIEPIDEDGNPK-KVSRFKAA 73
 
Name Accession Description Interval E-value
DUF3835 pfam12927
Domain of unknown function (DUF3835); This is a C-terminal domain conserved in fungi.
 613-688 1.26e-15

Domain of unknown function (DUF3835); This is a C-terminal domain conserved in fungi.


Pssm-ID: 463753  Cd Length: 73  Bit Score: 71.84  E-value: 1.26e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 3169077    613 VVERTPSDkiSESKEAFDaKVEEISDQRAISQRYYELRKKMIDNTGEYIKDEEEQAVIPLDENGNEKpKMSRFMTA 688
Cdd:pfam12927   2 VVERDIPE--AAAPPDPD-ELDEELLRREVATEYHRLRNRMIQQQGGFLKSDEELEIEPIDEDGNPK-KVSRFKAA 73
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH