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Conserved domains on  [gi|2961374|emb|CAA18121|]
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putative disease resistance protein [Arabidopsis thaliana]

Protein Classification

disease resistance family protein( domain architecture ID 1000118)

disease resistance family protein similar to Nicotiana glutinosa TMV resistance protein N; resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via a direct or indirect interaction with this avirulence protein

Gene Ontology:  GO:0006952

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
PLN03210 super family cl33662
Resistant to P. syringae 6; Provisional
19-1076 2.13e-110

Resistant to P. syringae 6; Provisional


The actual alignment was detected with superfamily member PLN03210:

Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 373.06  E-value: 2.13e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374     19 HQVFLNFRGKQLRNGFVSHLEKALRRDGINVFIDRNETKGRDLS-NLFSRIQESRIALAIFSSMYTESYWCLDELVKIKD 97
Cdd:PLN03210   13 YDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDpELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIVR 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374     98 CVDLGTLVVIPIFYMVDTDDVKNLKGAFGYTFwklAKTCNGEKLD---KWKQALKDVPKKLGFTLSEMSDEGESINQIVG 174
Cdd:PLN03210   93 CKEELGQLVIPVFYGLDPSHVRKQTGDFGEAF---EKTCQNKTEDekiQWKQALTDVANILGYHSQNWPNEAKMIEEIAN 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    175 EVIKVLSSDVMPDLEReipiddpfptgeqvpeaapdspppLFGIETRLKQLEEKLDFECKDTLTIGVVGMPGIGKTTLTS 254
Cdd:PLN03210  170 DVLGKLNLTPSNDFED------------------------FVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIAR 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    255 MLYEKWQHDFLRCVFLHDV----------RKMWKDCMMD---RSIFIEELLKDDNVNQEVADFSPESLKalllSKKSLVV 321
Cdd:PLN03210  226 ALFSRLSRQFQSSVFIDRAfisksmeiysSANPDDYNMKlhlQRAFLSEILDKKDIKIYHLGAMEERLK----HRKVLIF 301
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    322 LDNVSDKKQIEVLLGESDWIKRGSRIFITTSDRSVIEGM-VDDTYEVLRLTGRDSFEYFSYFAFSgKLCPPvRTFMNLSR 400
Cdd:PLN03210  302 IDDLDDQDVLDALAGQTQWFGSGSRIIVITKDKHFLRAHgIDHIYEVCLPSNELALEMFCRSAFK-KNSPP-DGFMELAS 379
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    401 LFADYAKGNPLALKILGKELNGKDKTHWEEKLSKLMQSPNKTIQDVLRVSYDELGlSHKD--VFLDVACFFRSGDEYYVR 478
Cdd:PLN03210  380 EVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLN-NKKDkaIFRHIACLFNGEKVNDIK 458
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    479 CLVESCDteaIDTVSEIKDLASKFLINISGGRVEMHDLLYTFGKEL-----GSQGSRR-LWNHKAVVGALKNRVGA--VR 550
Cdd:PLN03210  459 LLLANSD---LDVNIGLKNLVDKSLIHVREDIVEMHSLLQEMGKEIvraqsNEPGEREfLVDAKDICDVLEDNTGTkkVL 535
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    551 GIFLDMSELKKkLPLDRSTFIKMRNLRYLKFYSSRCDRECEAdsKLNFPEGLEFPLDEIRYLYWLKFPLMKLPKDFNPKN 630
Cdd:PLN03210  536 GITLDIDEIDE-LHIHENAFKGMRNLLFLKFYTKKWDQKKEV--RWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPEN 612
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    631 LTDFNLPYSEIEELWEGAKDTQKLKWVDLSHSRKLCNLSGLLNAESLQRLNLEGCTSLEELPREMKRMKSLIFLNMRGCT 710
Cdd:PLN03210  613 LVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCE 692
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    711 SLRVLPR-MNLISLKTLILTNCSSIQKFQVISDNLETLHLDGTAIGKLPTDMvKLQKLIVLNLkdCKMLGavpeflGKLK 789
Cdd:PLN03210  693 NLEILPTgINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSNL-RLENLDELIL--CEMKS------EKLW 763
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    790 ALQELVlsgcsklktfsVPIETMKClqillldgtalkemPKLLRFNSSRVEDLPELRRGINGLSSLRRLCLSRNNMISNL 869
Cdd:PLN03210  764 ERVQPL-----------TPLMTMLS--------------PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETL 818
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    870 QIDINqLYHLKWLDLKYCKNLTSIPLLPPN-----------------------LEILDAHGCEKLKTVASPMALLKLMEQ 926
Cdd:PLN03210  819 PTGIN-LESLESLDLSGCSRLRTFPDISTNisdlnlsrtgieevpwwiekfsnLSFLDMNGCNNLQRVSLNISKLKHLET 897
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    927 VQskfiFTNCNNLEQVAKNSITS-----YAQRKSQLDARRCYKeggvsealFIACF-------------------PGSDV 982
Cdd:PLN03210  898 VD----FSDCGALTEASWNGSPSevamaTDNIHSKLPSTVCIN--------FINCFnldqeallqqqsifkqlilSGEEV 965
                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    983 PSWFNYQTFGSAL-RLKLP-PHWCDNRLSTIAlCAVVTFPDTQDEINRFSIECTCEFKNELGTciRFSCTlggswiesrk 1060
Cdd:PLN03210  966 PSYFTHRTTGASLtNIPLLhISPCQPFFRFRA-CAVVDSESFFIISVSFDIQVCCRFIDRLGN--HFDSP---------- 1032
                        1130
                  ....*....|....*.
gi 2961374   1061 iDSDHVFIGYTSSSHI 1076
Cdd:PLN03210 1033 -YQPHVFSVTKKGSHL 1047
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
19-1076 2.13e-110

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 373.06  E-value: 2.13e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374     19 HQVFLNFRGKQLRNGFVSHLEKALRRDGINVFIDRNETKGRDLS-NLFSRIQESRIALAIFSSMYTESYWCLDELVKIKD 97
Cdd:PLN03210   13 YDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDpELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIVR 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374     98 CVDLGTLVVIPIFYMVDTDDVKNLKGAFGYTFwklAKTCNGEKLD---KWKQALKDVPKKLGFTLSEMSDEGESINQIVG 174
Cdd:PLN03210   93 CKEELGQLVIPVFYGLDPSHVRKQTGDFGEAF---EKTCQNKTEDekiQWKQALTDVANILGYHSQNWPNEAKMIEEIAN 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    175 EVIKVLSSDVMPDLEReipiddpfptgeqvpeaapdspppLFGIETRLKQLEEKLDFECKDTLTIGVVGMPGIGKTTLTS 254
Cdd:PLN03210  170 DVLGKLNLTPSNDFED------------------------FVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIAR 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    255 MLYEKWQHDFLRCVFLHDV----------RKMWKDCMMD---RSIFIEELLKDDNVNQEVADFSPESLKalllSKKSLVV 321
Cdd:PLN03210  226 ALFSRLSRQFQSSVFIDRAfisksmeiysSANPDDYNMKlhlQRAFLSEILDKKDIKIYHLGAMEERLK----HRKVLIF 301
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    322 LDNVSDKKQIEVLLGESDWIKRGSRIFITTSDRSVIEGM-VDDTYEVLRLTGRDSFEYFSYFAFSgKLCPPvRTFMNLSR 400
Cdd:PLN03210  302 IDDLDDQDVLDALAGQTQWFGSGSRIIVITKDKHFLRAHgIDHIYEVCLPSNELALEMFCRSAFK-KNSPP-DGFMELAS 379
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    401 LFADYAKGNPLALKILGKELNGKDKTHWEEKLSKLMQSPNKTIQDVLRVSYDELGlSHKD--VFLDVACFFRSGDEYYVR 478
Cdd:PLN03210  380 EVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLN-NKKDkaIFRHIACLFNGEKVNDIK 458
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    479 CLVESCDteaIDTVSEIKDLASKFLINISGGRVEMHDLLYTFGKEL-----GSQGSRR-LWNHKAVVGALKNRVGA--VR 550
Cdd:PLN03210  459 LLLANSD---LDVNIGLKNLVDKSLIHVREDIVEMHSLLQEMGKEIvraqsNEPGEREfLVDAKDICDVLEDNTGTkkVL 535
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    551 GIFLDMSELKKkLPLDRSTFIKMRNLRYLKFYSSRCDRECEAdsKLNFPEGLEFPLDEIRYLYWLKFPLMKLPKDFNPKN 630
Cdd:PLN03210  536 GITLDIDEIDE-LHIHENAFKGMRNLLFLKFYTKKWDQKKEV--RWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPEN 612
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    631 LTDFNLPYSEIEELWEGAKDTQKLKWVDLSHSRKLCNLSGLLNAESLQRLNLEGCTSLEELPREMKRMKSLIFLNMRGCT 710
Cdd:PLN03210  613 LVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCE 692
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    711 SLRVLPR-MNLISLKTLILTNCSSIQKFQVISDNLETLHLDGTAIGKLPTDMvKLQKLIVLNLkdCKMLGavpeflGKLK 789
Cdd:PLN03210  693 NLEILPTgINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSNL-RLENLDELIL--CEMKS------EKLW 763
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    790 ALQELVlsgcsklktfsVPIETMKClqillldgtalkemPKLLRFNSSRVEDLPELRRGINGLSSLRRLCLSRNNMISNL 869
Cdd:PLN03210  764 ERVQPL-----------TPLMTMLS--------------PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETL 818
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    870 QIDINqLYHLKWLDLKYCKNLTSIPLLPPN-----------------------LEILDAHGCEKLKTVASPMALLKLMEQ 926
Cdd:PLN03210  819 PTGIN-LESLESLDLSGCSRLRTFPDISTNisdlnlsrtgieevpwwiekfsnLSFLDMNGCNNLQRVSLNISKLKHLET 897
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    927 VQskfiFTNCNNLEQVAKNSITS-----YAQRKSQLDARRCYKeggvsealFIACF-------------------PGSDV 982
Cdd:PLN03210  898 VD----FSDCGALTEASWNGSPSevamaTDNIHSKLPSTVCIN--------FINCFnldqeallqqqsifkqlilSGEEV 965
                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    983 PSWFNYQTFGSAL-RLKLP-PHWCDNRLSTIAlCAVVTFPDTQDEINRFSIECTCEFKNELGTciRFSCTlggswiesrk 1060
Cdd:PLN03210  966 PSYFTHRTTGASLtNIPLLhISPCQPFFRFRA-CAVVDSESFFIISVSFDIQVCCRFIDRLGN--HFDSP---------- 1032
                        1130
                  ....*....|....*.
gi 2961374   1061 iDSDHVFIGYTSSSHI 1076
Cdd:PLN03210 1033 -YQPHVFSVTKKGSHL 1047
TIR smart00255
Toll - interleukin 1 - resistance;
18-154 2.79e-42

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 151.32  E-value: 2.79e-42
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374       18 QHQVFLNFRGK-QLRNGFVSHLEKALRRDGINVFIDRNETKGRDLSNLFSRIQESRIALAIFSSMYTESYWCLDELVKIK 96
Cdd:smart00255    1 EYDVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80
                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374       97 DCV-DLGTLVVIPIFYMVDTDDVKNLKGAFGYTFWKLAKTCNGEKLD-KWKQALKDVPKK 154
Cdd:smart00255   81 ENAlEEGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKEqFWKKALYAVPSK 140
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
19-173 6.01e-40

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 145.59  E-value: 6.01e-40
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374      19 HQVFLNFRGKQLRNGFVSHLEKALRRDGINVFID-RNETKGRDLS-NLFSRIQESRIALAIFSSMYTESYWCLDELVKIK 96
Cdd:pfam01582    1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDdRDLEPGEAIApELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2961374      97 DCVDLGTLVVIPIFYMVDTDDVKNLKGAFGYTFWKLAKTCNGEKLDKWKQALKDVPKKlgFTLSEMSDEGESINQIV 173
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIA 155
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
593-871 4.70e-20

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 94.23  E-value: 4.70e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   593 DSKLNFPEGLEFPLDEIRYLYWLKFPLMKLPKDFNPKNLTDFNLPYSEIEELwegakdtQKLKWVDLSHSRKLCNLSgll 672
Cdd:COG4886   44 SLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDL-------TNLTELDLSGNEELSNLT--- 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   673 naeSLQRLNLEGcTSLEELPREMKRMKSLIFLNMRGcTSLRVLPrmnlislktliltncSSIQKFQvisdNLETLHLDGT 752
Cdd:COG4886  114 ---NLESLDLSG-NQLTDLPEELANLTNLKELDLSN-NQLTDLP---------------EPLGNLT----NLKSLDLSNN 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   753 AIGKLPTDMVKLQKLIVLNLKDCKmLGAVPEFLGKLKALQELVLSGCsKLKTFSVPIETMKCLQILLLDGTALKEMPKL- 831
Cdd:COG4886  170 QLTDLPEELGNLTNLKELDLSNNQ-ITDLPEPLGNLTNLEELDLSGN-QLTDLPEPLANLTNLETLDLSNNQLTDLPELg 247
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 2961374   832 -------LRFNSSRVEDLPELrrgiNGLSSLRRLCLSrNNMISNLQI 871
Cdd:COG4886  248 nltnleeLDLSNNQLTDLPPL----ANLTNLKTLDLS-NNQLTDLKL 289
AMN1 cd09293
Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in ...
629-825 8.92e-04

Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in Saccharomyces cerevisiae as a component of the Antagonist of MEN pathway (AMEN). The AMEN network is activated by MEN (mitotic exit network) via an active Cdc14, and in turn switches off MEN. Amn1 constitutes one of the alternative mechanisms by which MEN may be disrupted. Specifically, Amn1 binds Tem1 (Termination of M-phase, a GTPase that belongs to the RAS superfamily), and disrupts its association with Cdc15, the primary downstream target. Amn1 is a leucine-rich repeat (LRR) protein, with 12 repeats in the S. cerevisiae ortholog. As a negative regulator of the signal transduction pathway MEN, overexpression of AMN1 slows the growth of wild type cells. The function of the vertebrate members of this family has not been determined experimentally, they have fewer LRRs that determine the extent of this model.


Pssm-ID: 187754 [Multi-domain]  Cd Length: 226  Bit Score: 42.31  E-value: 8.92e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   629 KNLTDFNlpyseIEELWEgaKDTQKLKWVDLSHSRKLCN-LSGLLNAESLQRLNLEGCTSL--EELPREMKRMKSLIFLN 705
Cdd:cd09293   12 GQITQSN-----ISQLLR--ILHSGLEWLELYMCPISDPpLDQLSNCNKLKKLILPGSKLIddEGLIALAQSCPNLQVLD 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   706 MRGCTslrvlprmnLISLKTL--ILTNCSsiqkfqvisdNLETLHLDGTAIGKLPTDmVKLQKLIvlnlKDCKMLGAVpE 783
Cdd:cd09293   85 LRACE---------NITDSGIvaLATNCP----------KLQTINLGRHRNGHLITD-VSLSALG----KNCTFLQTV-G 139
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   784 F--------------LGKLKALQELVLSGCSKLKTFSVPIETM----KCLQILLLDGTAL 825
Cdd:cd09293  140 FagcdvtdkgvwelaSGCSKSLERLSLNNCRNLTDQSIPAILAsnyfPNLSVLEFRGCPL 199
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
19-1076 2.13e-110

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 373.06  E-value: 2.13e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374     19 HQVFLNFRGKQLRNGFVSHLEKALRRDGINVFIDRNETKGRDLS-NLFSRIQESRIALAIFSSMYTESYWCLDELVKIKD 97
Cdd:PLN03210   13 YDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDpELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIVR 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374     98 CVDLGTLVVIPIFYMVDTDDVKNLKGAFGYTFwklAKTCNGEKLD---KWKQALKDVPKKLGFTLSEMSDEGESINQIVG 174
Cdd:PLN03210   93 CKEELGQLVIPVFYGLDPSHVRKQTGDFGEAF---EKTCQNKTEDekiQWKQALTDVANILGYHSQNWPNEAKMIEEIAN 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    175 EVIKVLSSDVMPDLEReipiddpfptgeqvpeaapdspppLFGIETRLKQLEEKLDFECKDTLTIGVVGMPGIGKTTLTS 254
Cdd:PLN03210  170 DVLGKLNLTPSNDFED------------------------FVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIAR 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    255 MLYEKWQHDFLRCVFLHDV----------RKMWKDCMMD---RSIFIEELLKDDNVNQEVADFSPESLKalllSKKSLVV 321
Cdd:PLN03210  226 ALFSRLSRQFQSSVFIDRAfisksmeiysSANPDDYNMKlhlQRAFLSEILDKKDIKIYHLGAMEERLK----HRKVLIF 301
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    322 LDNVSDKKQIEVLLGESDWIKRGSRIFITTSDRSVIEGM-VDDTYEVLRLTGRDSFEYFSYFAFSgKLCPPvRTFMNLSR 400
Cdd:PLN03210  302 IDDLDDQDVLDALAGQTQWFGSGSRIIVITKDKHFLRAHgIDHIYEVCLPSNELALEMFCRSAFK-KNSPP-DGFMELAS 379
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    401 LFADYAKGNPLALKILGKELNGKDKTHWEEKLSKLMQSPNKTIQDVLRVSYDELGlSHKD--VFLDVACFFRSGDEYYVR 478
Cdd:PLN03210  380 EVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLN-NKKDkaIFRHIACLFNGEKVNDIK 458
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    479 CLVESCDteaIDTVSEIKDLASKFLINISGGRVEMHDLLYTFGKEL-----GSQGSRR-LWNHKAVVGALKNRVGA--VR 550
Cdd:PLN03210  459 LLLANSD---LDVNIGLKNLVDKSLIHVREDIVEMHSLLQEMGKEIvraqsNEPGEREfLVDAKDICDVLEDNTGTkkVL 535
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    551 GIFLDMSELKKkLPLDRSTFIKMRNLRYLKFYSSRCDRECEAdsKLNFPEGLEFPLDEIRYLYWLKFPLMKLPKDFNPKN 630
Cdd:PLN03210  536 GITLDIDEIDE-LHIHENAFKGMRNLLFLKFYTKKWDQKKEV--RWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPEN 612
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    631 LTDFNLPYSEIEELWEGAKDTQKLKWVDLSHSRKLCNLSGLLNAESLQRLNLEGCTSLEELPREMKRMKSLIFLNMRGCT 710
Cdd:PLN03210  613 LVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCE 692
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    711 SLRVLPR-MNLISLKTLILTNCSSIQKFQVISDNLETLHLDGTAIGKLPTDMvKLQKLIVLNLkdCKMLGavpeflGKLK 789
Cdd:PLN03210  693 NLEILPTgINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSNL-RLENLDELIL--CEMKS------EKLW 763
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    790 ALQELVlsgcsklktfsVPIETMKClqillldgtalkemPKLLRFNSSRVEDLPELRRGINGLSSLRRLCLSRNNMISNL 869
Cdd:PLN03210  764 ERVQPL-----------TPLMTMLS--------------PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETL 818
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    870 QIDINqLYHLKWLDLKYCKNLTSIPLLPPN-----------------------LEILDAHGCEKLKTVASPMALLKLMEQ 926
Cdd:PLN03210  819 PTGIN-LESLESLDLSGCSRLRTFPDISTNisdlnlsrtgieevpwwiekfsnLSFLDMNGCNNLQRVSLNISKLKHLET 897
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    927 VQskfiFTNCNNLEQVAKNSITS-----YAQRKSQLDARRCYKeggvsealFIACF-------------------PGSDV 982
Cdd:PLN03210  898 VD----FSDCGALTEASWNGSPSevamaTDNIHSKLPSTVCIN--------FINCFnldqeallqqqsifkqlilSGEEV 965
                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    983 PSWFNYQTFGSAL-RLKLP-PHWCDNRLSTIAlCAVVTFPDTQDEINRFSIECTCEFKNELGTciRFSCTlggswiesrk 1060
Cdd:PLN03210  966 PSYFTHRTTGASLtNIPLLhISPCQPFFRFRA-CAVVDSESFFIISVSFDIQVCCRFIDRLGN--HFDSP---------- 1032
                        1130
                  ....*....|....*.
gi 2961374   1061 iDSDHVFIGYTSSSHI 1076
Cdd:PLN03210 1033 -YQPHVFSVTKKGSHL 1047
TIR smart00255
Toll - interleukin 1 - resistance;
18-154 2.79e-42

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 151.32  E-value: 2.79e-42
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374       18 QHQVFLNFRGK-QLRNGFVSHLEKALRRDGINVFIDRNETKGRDLSNLFSRIQESRIALAIFSSMYTESYWCLDELVKIK 96
Cdd:smart00255    1 EYDVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80
                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374       97 DCV-DLGTLVVIPIFYMVDTDDVKNLKGAFGYTFWKLAKTCNGEKLD-KWKQALKDVPKK 154
Cdd:smart00255   81 ENAlEEGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKEqFWKKALYAVPSK 140
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
19-173 6.01e-40

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 145.59  E-value: 6.01e-40
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374      19 HQVFLNFRGKQLRNGFVSHLEKALRRDGINVFID-RNETKGRDLS-NLFSRIQESRIALAIFSSMYTESYWCLDELVKIK 96
Cdd:pfam01582    1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDdRDLEPGEAIApELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2961374      97 DCVDLGTLVVIPIFYMVDTDDVKNLKGAFGYTFWKLAKTCNGEKLDKWKQALKDVPKKlgFTLSEMSDEGESINQIV 173
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIA 155
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
593-871 4.70e-20

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 94.23  E-value: 4.70e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   593 DSKLNFPEGLEFPLDEIRYLYWLKFPLMKLPKDFNPKNLTDFNLPYSEIEELwegakdtQKLKWVDLSHSRKLCNLSgll 672
Cdd:COG4886   44 SLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDL-------TNLTELDLSGNEELSNLT--- 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   673 naeSLQRLNLEGcTSLEELPREMKRMKSLIFLNMRGcTSLRVLPrmnlislktliltncSSIQKFQvisdNLETLHLDGT 752
Cdd:COG4886  114 ---NLESLDLSG-NQLTDLPEELANLTNLKELDLSN-NQLTDLP---------------EPLGNLT----NLKSLDLSNN 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   753 AIGKLPTDMVKLQKLIVLNLKDCKmLGAVPEFLGKLKALQELVLSGCsKLKTFSVPIETMKCLQILLLDGTALKEMPKL- 831
Cdd:COG4886  170 QLTDLPEELGNLTNLKELDLSNNQ-ITDLPEPLGNLTNLEELDLSGN-QLTDLPEPLANLTNLETLDLSNNQLTDLPELg 247
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 2961374   832 -------LRFNSSRVEDLPELrrgiNGLSSLRRLCLSrNNMISNLQI 871
Cdd:COG4886  248 nltnleeLDLSNNQLTDLPPL----ANLTNLKTLDLS-NNQLTDLKL 289
NB-ARC pfam00931
NB-ARC domain;
218-460 5.05e-19

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 87.82  E-value: 5.05e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374     218 IETRLKQLEEKLDFECkDTLTIGVVGMPGIGKTTLTSMLYEKwqHDFLRCVFlhDVRkMWkdCMMDRSIFIEELLKDDNV 297
Cdd:pfam00931    1 REDMVEKVIGKLSEKD-EPGIVGIHGMGGVGKTTLAAQIFND--FDEVEGHF--DSV-AW--VVVSKTFTISTLQQTILQ 72
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374     298 N---QEVADFSPESLKA------LLLSKKSLVVLDNVSDKKQIEVLLGESDWIKRGSRIFITTSDRSVIEGM--VDDTYE 366
Cdd:pfam00931   73 NlglSEDDWDNKEEGELarkirrALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGRVggPSDPHE 152
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374     367 VLRLTGRDSFEYFSYFAFSGKLCPPvRTFMNLSRLFADYAKGNPLALKILGKELNGKDKTHWEEKLSKLMQSPNKTIQDV 446
Cdd:pfam00931  153 VELLEPDEAWELFENKVFPKTLGEC-ELLEDVAKEIVEKCRGLPLALKVLGGLLSCKKTVEEWKHVYDVLQSELKSNSYS 231
                          250
                   ....*....|....
gi 2961374     447 LRVSYDELGLSHKD 460
Cdd:pfam00931  232 LNSVRSILQLSYEN 245
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
629-908 6.07e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 81.52  E-value: 6.07e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   629 KNLTDFNLPY-SEIEELwegakdtQKLKWVDLSHSrKLCNL-SGLLNAESLQRLNLEGcTSLEELPREMKRMKSLIFLNM 706
Cdd:COG4886   96 TNLTELDLSGnEELSNL-------TNLESLDLSGN-QLTDLpEELANLTNLKELDLSN-NQLTDLPEPLGNLTNLKSLDL 166
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   707 RGCtSLRVLPRM--NLISLKTLILTNC--SSIQKfqVISD--NLETLHLDGTAIGKLPTDMVKLQKLIVLNLKDCKmLGA 780
Cdd:COG4886  167 SNN-QLTDLPEElgNLTNLKELDLSNNqiTDLPE--PLGNltNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQ-LTD 242
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   781 VPEfLGKLKALQELVLSGCsKLKTFSvPIETMKCLQILLLDGTALKEMPKLLRFNSSRVEDLPELRRGINGLSSLRRLCL 860
Cdd:COG4886  243 LPE-LGNLTNLEELDLSNN-QLTDLP-PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLL 319
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 2961374   861 SRNNMISNLQIDINQLYHLKWLDLKYCKNLTSIPLLPPNLEILDAHGC 908
Cdd:COG4886  320 LTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLL 367
C-JID pfam20160
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron ...
977-1121 1.31e-11

C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron microscopy (cryoEM) structures of plant intracellular immune receptors containing Toll/interleukin-1 receptor (TIR, PF01582), nucleotide-binding (NB-ARC, PF00931) and leucine-rich repeat (LRR) domains (TIR-NLRs). Structurally, the C-JID core is represented by a beta-sandwich made up of 8 to 9 beta-strands. C-JID matches the so-called post LRR domain originally detected via a set of MEME motifs. The domain showed a strong distribution bias towards TIR-NLRs of dicotyledonous plant species despite broader taxonomic distribution of TIR-NLR in plant groups. Structure-function analyses of cryoEM structures suggest that C-JID domains play a role in substrate-recognition, such as binding to effector proteins from pathogens, and thus are involved in the initiation of signaling by TIR-NLR receptors. Presence of C-JID (or post-LRR) and its importance for the function of Arabidopsis TIR-NLR RPS4 that partners with RRS1 for effector recognition suggest that C-JID has additional functions.


Pssm-ID: 466313  Cd Length: 108  Bit Score: 62.46  E-value: 1.31e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374     977 FPGSDVPSWFNYQTFGSALRLKLPPHWCDNRLSTIALCAVVTFpdtqdeinrfsiecTCEFKNELGTCIRFSCTLGGSWI 1056
Cdd:pfam20160    1 LPGSQIPEWFNHQSTGSSISIKLPENWYNDNFLGFAVCAVGSL--------------IPSLHNFLGYIHFFLIPLVSLWD 66
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2961374    1057 ESRKIDSDHVFIGYtssshitkhlegslklkehdkcvpTEASIEFEviDGAGEIVNCGLSLVYEE 1121
Cdd:pfam20160   67 TSKANGKTPNDYGR------------------------IEASFEFP--SDLHEIKQCGVRLIYKD 105
TIR_2 pfam13676
TIR domain; This is a family of Toll-like receptors.
21-127 9.21e-09

TIR domain; This is a family of Toll-like receptors.


Pssm-ID: 463954 [Multi-domain]  Cd Length: 118  Bit Score: 54.63  E-value: 9.21e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374      21 VFLNFRGKQlrNGFVSHLEKALRRDGINVFIDRNETK-GRDL-SNLFSRIQESRIALAIFSSMYTESYWCLDELVKIKDC 98
Cdd:pfam13676    1 VFISYAGED--RAWAEWLADALEAAGYRVWLDRWDIRpGDDWvEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALAD 78
                           90       100
                   ....*....|....*....|....*....
gi 2961374      99 VDLGTlVVIPIfyMVDTDDVKNLKGAFGY 127
Cdd:pfam13676   79 PEGRK-RLIPV--RLECDLELPGLAGLQY 104
PLN03194 PLN03194
putative disease resistance protein; Provisional
12-194 6.63e-08

putative disease resistance protein; Provisional


Pssm-ID: 215626 [Multi-domain]  Cd Length: 187  Bit Score: 54.06  E-value: 6.63e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374     12 VQLSPPQHQVFLNFRGKQLRNGFVSHLEKALRRDGINVFIDRNETKGRD--LSNLFSRIQESRIALAIFSSMYTESYWCL 89
Cdd:PLN03194   20 SSSSAKPCDVFINHRGIDTKRTIATLLYDHLSRLNLRPFLDNKNMKPGDklFDKINSAIRNCKVGVAVFSPRYCESYFCL 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374     90 DELVKIKDCVDLgtlvVIPIFYMVDTD--DVKNlkgafgytfwklAKTCNGEKLDKWKQALKDVPKKLGFTLsemsdegE 167
Cdd:PLN03194  100 HELALIMESKKR----VIPIFCDVKPSqlRVVD------------NGTCPDEEIRRFNWALEEAKYTVGLTF-------D 156
                         170       180       190
                  ....*....|....*....|....*....|
gi 2961374    168 SINQIVGEVIKVLSSDVMP---DLEREIPI 194
Cdd:PLN03194  157 SLKGNWSEVVTMASDAVIKnliELEEEKSV 186
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
671-904 1.86e-05

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 49.08  E-value: 1.86e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    671 LLNAESLQRLNLEGCTSLEELPREMKRMKSL--IFL---NMRGCTSLRVlprMNLISLKTLILTNCSSIQKFQVISDNLE 745
Cdd:PLN00113  184 LTNLTSLEFLTLASNQLVGQIPRELGQMKSLkwIYLgynNLSGEIPYEI---GGLTSLNHLDLVYNNLTGPIPSSLGNLK 260
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    746 TLHL----DGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGKLKALQELVLSGCSKLKTFSVPIETMKCLQILLLD 821
Cdd:PLN00113  261 NLQYlflyQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLW 340
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    822 GTALK-EMPKLL-RFNSSRVEDLP------------------------------ELRRGINGLSSLRRLCLSRNNMISNL 869
Cdd:PLN00113  341 SNKFSgEIPKNLgKHNNLTVLDLStnnltgeipeglcssgnlfklilfsnslegEIPKSLGACRSLRRVRLQDNSFSGEL 420
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 2961374    870 QIDINQLYHLKWLDL---KYCKNLTSIPLLPPNLEILD 904
Cdd:PLN00113  421 PSEFTKLPLVYFLDIsnnNLQGRINSRKWDMPSLQMLS 458
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
727-894 2.29e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 45.61  E-value: 2.29e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    727 ILTNCSSIQKFQVISDN------------LETLHLDGTAI-GKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGKLKALQE 793
Cdd:PLN00113  113 IFTTSSSLRYLNLSNNNftgsiprgsipnLETLDLSNNMLsGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEF 192
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    794 LVLSgcSKLKTFSVPIE--TMKCLQILLLDGTALK-EMPKllrfnssrvedlpelrrGINGLSSLRRLCLSRNNMISNLQ 870
Cdd:PLN00113  193 LTLA--SNQLVGQIPRElgQMKSLKWIYLGYNNLSgEIPY-----------------EIGGLTSLNHLDLVYNNLTGPIP 253
                         170       180
                  ....*....|....*....|....
gi 2961374    871 IDINQLYHLKWLDLKYCKNLTSIP 894
Cdd:PLN00113  254 SSLGNLKNLQYLFLYQNKLSGPIP 277
PLN03150 PLN03150
hypothetical protein; Provisional
747-852 5.76e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 44.04  E-value: 5.76e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374    747 LHLDGTAI-GKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGKLKALQELVLSGCSKLKTFSVPIETMKCLQILLLDGTAL 825
Cdd:PLN03150  423 LGLDNQGLrGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
                          90       100       110
                  ....*....|....*....|....*....|...
gi 2961374    826 K-EMP-----KLLRFNSSRVEDLPELrRGINGL 852
Cdd:PLN03150  503 SgRVPaalggRLLHRASFNFTDNAGL-CGIPGL 534
LRR_3 pfam07725
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ...
630-649 7.22e-04

Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.


Pssm-ID: 429621 [Multi-domain]  Cd Length: 20  Bit Score: 37.70  E-value: 7.22e-04
                           10        20
                   ....*....|....*....|
gi 2961374     630 NLTDFNLPYSEIEELWEGAK 649
Cdd:pfam07725    1 NLVELNMPYSKLEKLWEGVK 20
AMN1 cd09293
Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in ...
629-825 8.92e-04

Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in Saccharomyces cerevisiae as a component of the Antagonist of MEN pathway (AMEN). The AMEN network is activated by MEN (mitotic exit network) via an active Cdc14, and in turn switches off MEN. Amn1 constitutes one of the alternative mechanisms by which MEN may be disrupted. Specifically, Amn1 binds Tem1 (Termination of M-phase, a GTPase that belongs to the RAS superfamily), and disrupts its association with Cdc15, the primary downstream target. Amn1 is a leucine-rich repeat (LRR) protein, with 12 repeats in the S. cerevisiae ortholog. As a negative regulator of the signal transduction pathway MEN, overexpression of AMN1 slows the growth of wild type cells. The function of the vertebrate members of this family has not been determined experimentally, they have fewer LRRs that determine the extent of this model.


Pssm-ID: 187754 [Multi-domain]  Cd Length: 226  Bit Score: 42.31  E-value: 8.92e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   629 KNLTDFNlpyseIEELWEgaKDTQKLKWVDLSHSRKLCN-LSGLLNAESLQRLNLEGCTSL--EELPREMKRMKSLIFLN 705
Cdd:cd09293   12 GQITQSN-----ISQLLR--ILHSGLEWLELYMCPISDPpLDQLSNCNKLKKLILPGSKLIddEGLIALAQSCPNLQVLD 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   706 MRGCTslrvlprmnLISLKTL--ILTNCSsiqkfqvisdNLETLHLDGTAIGKLPTDmVKLQKLIvlnlKDCKMLGAVpE 783
Cdd:cd09293   85 LRACE---------NITDSGIvaLATNCP----------KLQTINLGRHRNGHLITD-VSLSALG----KNCTFLQTV-G 139
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   784 F--------------LGKLKALQELVLSGCSKLKTFSVPIETM----KCLQILLLDGTAL 825
Cdd:cd09293  140 FagcdvtdkgvwelaSGCSKSLERLSLNNCRNLTDQSIPAILAsnyfPNLSVLEFRGCPL 199
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
663-803 1.52e-03

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 41.31  E-value: 1.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   663 RKLCNLSGLLNaesLQRL-----------NLEGCTSLEEL-------PREMKrmksLIFlnmrGCTSLRVLPRmnliSLK 724
Cdd:cd21340   59 EKIENLENLVN---LKKLylggnrisvveGLENLTNLEELhienqrlPPGEK----LTF----DPRSLAALSN----SLR 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   725 TLILTNCssiqkfqvisdNLETLhldgtaigklpTDMVKLQKLIVLNLKDCKM--LGAVPEFLGKLKALQELVLSG---C 799
Cdd:cd21340  124 VLNISGN-----------NIDSL-----------EPLAPLRNLEQLDASNNQIsdLEELLDLLSSWPSLRELDLTGnpvC 181

                 ....
gi 2961374   800 SKLK 803
Cdd:cd21340  182 KKPK 185
NACHT COG5635
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
223-416 2.12e-03

Predicted NTPase, NACHT family domain [Signal transduction mechanisms];


Pssm-ID: 444362 [Multi-domain]  Cd Length: 935  Bit Score: 42.48  E-value: 2.12e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   223 KQLEEKLDFECKDTLTIGVVGMPGIGKTTLTSMLyekwqhdflrcvflhdVRKMWKDCMMDRS---IFIE--ELLKDDNV 297
Cdd:COG5635  167 IESLKRLELLEAKKKRLLILGEPGSGKTTLLRYL----------------ALELAERYLDAEDpipILIElrDLAEEASL 230
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2961374   298 NQEVADF-------SPESLKALLLSKKSLVVLDN---VSDKKQIEVLLGE-SDWIKR--GSRIFITTSDRSVIEGMVDD- 363
Cdd:COG5635  231 EDLLAEAlekrggePEDALERLLRNGRLLLLLDGldeVPDEADRDEVLNQlRRFLERypKARVIITSRPEGYDSSELEGf 310
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 2961374   364 -TYEVLRLTGRDSFEYFS-YFAFSGKLCPPVRTFMNLSRLFADYAKgNPLALKIL 416
Cdd:COG5635  311 eVLELAPLSDEQIEEFLKkWFEATERKAERLLEALEENPELRELAR-NPLLLTLL 364
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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