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Conserved domains on  [gi|1789582719|emb|CAA0382632|]
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unnamed protein product [Arabidopsis thaliana]

Protein Classification

Kelch domain-containing protein; kelch repeat and BTB domain-containing protein( domain architecture ID 11476525)

Kelch domain-containing protein is a protein that contains one or more kelch domains which play a role in a variety of cellular processes, including cell signaling, transcription regulation, and protein degradation.| kelch repeat and BTB (BR-C, ttk and bab)/POZ (Pox virus and Zinc finger) domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02193 PLN02193
nitrile-specifier protein
 1-470 0e+00

nitrile-specifier protein


:

Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 1031.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719   1 MAQKLEAKGGEMGDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80
Cdd:PLN02193    1 MAQKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719  81 REKVNDMTSEMITFLSIKTFKGKTSHPIEKRPGVKFVLHGGKIVGFHGRSTDVLHSLGAYVSLSSTTKLLGKWIKVEQKG 160
Cdd:PLN02193   81 REKVNDMTSEMITFLSFKTYKGKTSHPIEKRPGVKFVLQGGKIVGFHGRSTDVLHSLGAYISLPSTPKLLGKWIKVEQKG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 161 EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSVGSTLYVFGGRDAS 240
Cdd:PLN02193  161 EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDAS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 241 RQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWFHCSTPGDSLTARG 320
Cdd:PLN02193  241 RQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRG 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 321 GAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAALGKHIVIFGGEIAMDPLAHVGPGQL 400
Cdd:PLN02193  321 GAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQL 400

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 401 TDGTFALDTETLQWERLDKFGGEEETPSSRGWTASTTATIDGKKGLVMHGGKAPTNDRFDDLFFYGIDSA 470
Cdd:PLN02193  401 TDGTFALDTETLQWERLDKFGEEEETPSSRGWTASTTGTIDGKKGLVMHGGKAPTNDRFDDLFFYGIDSA 470
 
Name Accession Description Interval E-value
PLN02193 PLN02193
nitrile-specifier protein
 1-470 0e+00

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 1031.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719   1 MAQKLEAKGGEMGDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80
Cdd:PLN02193    1 MAQKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719  81 REKVNDMTSEMITFLSIKTFKGKTSHPIEKRPGVKFVLHGGKIVGFHGRSTDVLHSLGAYVSLSSTTKLLGKWIKVEQKG 160
Cdd:PLN02193   81 REKVNDMTSEMITFLSFKTYKGKTSHPIEKRPGVKFVLQGGKIVGFHGRSTDVLHSLGAYISLPSTPKLLGKWIKVEQKG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 161 EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSVGSTLYVFGGRDAS 240
Cdd:PLN02193  161 EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDAS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 241 RQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWFHCSTPGDSLTARG 320
Cdd:PLN02193  241 RQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRG 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 321 GAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAALGKHIVIFGGEIAMDPLAHVGPGQL 400
Cdd:PLN02193  321 GAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQL 400

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 401 TDGTFALDTETLQWERLDKFGGEEETPSSRGWTASTTATIDGKKGLVMHGGKAPTNDRFDDLFFYGIDSA 470
Cdd:PLN02193  401 TDGTFALDTETLQWERLDKFGEEEETPSSRGWTASTTGTIDGKKGLVMHGGKAPTNDRFDDLFFYGIDSA 470
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 13-142 4.13e-56

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 182.48  E-value: 4.13e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719  13 GDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEID-ADDYIVYVEGYREKVNDMTSEM 91
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDyPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1789582719  92 ITFLSIKTFKGKTSHPIEKRPGVKFVL--HGGKIVGFHGRSTDVLHSLGAYVS 142
Cdd:pfam01419  81 ITSLTFKTNKGRTSPFFGTPSGTKFSLevKGKKIVGFHGRAGNALNALGAYFA 133
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 13-142 7.68e-41

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 142.37  E-value: 7.68e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719   13 GDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGsQVVVGDEHGKKTELGvEEFEIDADDYIVYVEGYREKVNDMTSemi 92
Cdd:smart00915   1 GTEWDDGAFDGVRKIYVGQGGEGIKSIQFDYDKG-GKVWGDEHGGKGGTG-EEILLYPGEYITSVEGTYDKSGVITS--- 75

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1789582719   93 tfLSIKTFKGKTSHPIEKRPGVKFVLH---GGKIVGFHGR-STDVLHSLGAYVS 142
Cdd:smart00915  76 --LTFKTNKGRTSPFGGYEGGTKFVLEskeGKKIVGFHGRsSGDGLDSLGAYFS 127
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 13-142 5.83e-32

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 118.82  E-value: 5.83e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719  13 GDVWDDGVY-ENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTElGVEEFEIDA-DDYIVYVEGYREKVNDmtSE 90
Cdd:cd09612     1 GSAWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGGG-TPEEIVLDYpDEYITSVSGTYGPVSG--SN 77

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1789582719  91 MITFLSIKTFKgKTSHPIEKRPGVKFVL--HGGKIVGFHGRSTDVLHSLGAYVS 142
Cdd:cd09612    78 VITSLTFKTNK-RTYGPFGVESGTPFSLpvEGGKIVGFHGRSGDYLDAIGVYVS 130
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
163-443 5.14e-30

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 117.95  E-value: 5.14e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 163 PGLRCSHGIAQVGNKIYSFGGeFTPNQPIDKhLYVFDLETRTWSispATGDVPHLSCLGVRMVSVGSTLYVFGGRDA--- 239
Cdd:COG3055    10 PTPRSEAAAALLDGKVYVAGG-LSGGSASNS-FEVYDPATNTWS---ELAPLPGPPRHHAAAVAQDGKLYVFGGFTGanp 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 240 -SRQYNGFYSFDTTTNEWKLLTPVeegPTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWfhcSTPGDSLTA 318
Cdd:COG3055    85 sSTPLNDVYVYDPATNTWTKLAPM---PTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTW---TQLAPLPTP 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 319 RGG-AGLEVVQGKVWVVYGFNGcevddvhyyDPVQDKWTQVETFgvrPSERSVFASAALGKHIVIFGGEiamdplahvgp 397
Cdd:COG3055   159 RDHlAAAVLPDGKILVIGGRNG---------SGFSNTWTTLAPL---PTARAGHAAAVLGGKILVFGGE----------- 215

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1789582719 398 GQLTDGTFALDTETLQWERLDkfggeeETPSSRGWTAstTATIDGK 443
Cdd:COG3055   216 SGFSDEVEAYDPATNTWTALG------ELPTPRHGHA--AVLTDGK 253
 
Name Accession Description Interval E-value
PLN02193 PLN02193
nitrile-specifier protein
 1-470 0e+00

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 1031.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719   1 MAQKLEAKGGEMGDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80
Cdd:PLN02193    1 MAQKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719  81 REKVNDMTSEMITFLSIKTFKGKTSHPIEKRPGVKFVLHGGKIVGFHGRSTDVLHSLGAYVSLSSTTKLLGKWIKVEQKG 160
Cdd:PLN02193   81 REKVNDMTSEMITFLSFKTYKGKTSHPIEKRPGVKFVLQGGKIVGFHGRSTDVLHSLGAYISLPSTPKLLGKWIKVEQKG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 161 EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSVGSTLYVFGGRDAS 240
Cdd:PLN02193  161 EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDAS 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 241 RQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWFHCSTPGDSLTARG 320
Cdd:PLN02193  241 RQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRG 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 321 GAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAALGKHIVIFGGEIAMDPLAHVGPGQL 400
Cdd:PLN02193  321 GAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQL 400

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 401 TDGTFALDTETLQWERLDKFGGEEETPSSRGWTASTTATIDGKKGLVMHGGKAPTNDRFDDLFFYGIDSA 470
Cdd:PLN02193  401 TDGTFALDTETLQWERLDKFGEEEETPSSRGWTASTTGTIDGKKGLVMHGGKAPTNDRFDDLFFYGIDSA 470
PLN02153 PLN02153
epithiospecifier protein
 149-470 9.91e-152

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 435.18  E-value: 9.91e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 149 LLGKWIKVEQKG-EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSV 227
Cdd:PLN02153    5 LQGGWIKVEQKGgKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEE--GPTPRSFHSMAADEENVYVFGGVS------ATARLNTLDSY 299
Cdd:PLN02153   85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEegGPEARTFHSMASDENHVYVFGGVSkgglmkTPERFRTIEAY 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 300 NIVDKKWFHCSTPGDSLTARGGAGLEVVQGKVWVVYGF---------NGCEVDDVHYYDPVQDKWTQVETFGVRPSERSV 370
Cdd:PLN02153  165 NIADGKWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFatsilpggkSDYESNAVQFFDPASGKWTEVETTGAKPSARSV 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 371 FASAALGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWErldKFGGEEETPSSRGWTASTTATIDGKKGLVMHG 450
Cdd:PLN02153  245 FAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWE---KLGECGEPAMPRGWTAYTTATVYGKNGLLMHG 321

                         330       340
                  ....*....|....*....|
gi 1789582719 451 GKAPTNDRFDDLFFYGIDSA 470
Cdd:PLN02153  322 GKLPTNERTDDLYFYAVNSA 341
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 13-142 4.13e-56

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 182.48  E-value: 4.13e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719  13 GDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEID-ADDYIVYVEGYREKVNDMTSEM 91
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDyPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1789582719  92 ITFLSIKTFKGKTSHPIEKRPGVKFVL--HGGKIVGFHGRSTDVLHSLGAYVS 142
Cdd:pfam01419  81 ITSLTFKTNKGRTSPFFGTPSGTKFSLevKGKKIVGFHGRAGNALNALGAYFA 133
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 13-142 7.68e-41

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 142.37  E-value: 7.68e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719   13 GDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGsQVVVGDEHGKKTELGvEEFEIDADDYIVYVEGYREKVNDMTSemi 92
Cdd:smart00915   1 GTEWDDGAFDGVRKIYVGQGGEGIKSIQFDYDKG-GKVWGDEHGGKGGTG-EEILLYPGEYITSVEGTYDKSGVITS--- 75

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1789582719   93 tfLSIKTFKGKTSHPIEKRPGVKFVLH---GGKIVGFHGR-STDVLHSLGAYVS 142
Cdd:smart00915  76 --LTFKTNKGRTSPFGGYEGGTKFVLEskeGKKIVGFHGRsSGDGLDSLGAYFS 127
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 13-142 5.83e-32

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 118.82  E-value: 5.83e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719  13 GDVWDDGVY-ENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTElGVEEFEIDA-DDYIVYVEGYREKVNDmtSE 90
Cdd:cd09612     1 GSAWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGGG-TPEEIVLDYpDEYITSVSGTYGPVSG--SN 77

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1789582719  91 MITFLSIKTFKgKTSHPIEKRPGVKFVL--HGGKIVGFHGRSTDVLHSLGAYVS 142
Cdd:cd09612    78 VITSLTFKTNK-RTYGPFGVESGTPFSLpvEGGKIVGFHGRSGDYLDAIGVYVS 130
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
163-443 5.14e-30

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 117.95  E-value: 5.14e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 163 PGLRCSHGIAQVGNKIYSFGGeFTPNQPIDKhLYVFDLETRTWSispATGDVPHLSCLGVRMVSVGSTLYVFGGRDA--- 239
Cdd:COG3055    10 PTPRSEAAAALLDGKVYVAGG-LSGGSASNS-FEVYDPATNTWS---ELAPLPGPPRHHAAAVAQDGKLYVFGGFTGanp 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 240 -SRQYNGFYSFDTTTNEWKLLTPVeegPTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWfhcSTPGDSLTA 318
Cdd:COG3055    85 sSTPLNDVYVYDPATNTWTKLAPM---PTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTW---TQLAPLPTP 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 319 RGG-AGLEVVQGKVWVVYGFNGcevddvhyyDPVQDKWTQVETFgvrPSERSVFASAALGKHIVIFGGEiamdplahvgp 397
Cdd:COG3055   159 RDHlAAAVLPDGKILVIGGRNG---------SGFSNTWTTLAPL---PTARAGHAAAVLGGKILVFGGE----------- 215

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1789582719 398 GQLTDGTFALDTETLQWERLDkfggeeETPSSRGWTAstTATIDGK 443
Cdd:COG3055   216 SGFSDEVEAYDPATNTWTALG------ELPTPRHGHA--AVLTDGK 253
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
260-451 5.17e-16

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 77.89  E-value: 5.17e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 260 TPVEEGPTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWfhcsTPGDSL--TARGGAGLEVVQGKVWVVYGF 337
Cdd:COG3055     4 SSLPDLPTPRSEAAAALLDGKVYVAGGLSGGSASNSFEVYDPATNTW----SELAPLpgPPRHHAAAVAQDGKLYVFGGF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 338 NGCE-----VDDVHYYDPVQDKWTQVETFgvrPSERSVFASAALGKHIVIFGGEIAMDPLAHVgpgqltdgtFALDTETL 412
Cdd:COG3055    80 TGANpsstpLNDVYVYDPATNTWTKLAPM---PTPRGGATALLLDGKIYVVGGWDDGGNVAWV---------EVYDPATG 147

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1789582719 413 QWERLDKFggeeetPSSRGWTASttATIDGKKGLVMhGG 451
Cdd:COG3055   148 TWTQLAPL------PTPRDHLAA--AVLPDGKILVI-GG 177
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
151-334 3.05e-14

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 72.88  E-value: 3.05e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 151 GKWIKVeqkGEGPGLRCSHGIAQVGNKIYSFGGeFTPNQPIDKHlYVFDLETRTWS-ISPATGDVPHLSClgvrMVSVGS 229
Cdd:COG3055   100 NTWTKL---APMPTPRGGATALLLDGKIYVVGG-WDDGGNVAWV-EVYDPATGTWTqLAPLPTPRDHLAA----AVLPDG 170

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 230 TLYVFGGRDASRQYNGFysfdtttnewkllTPVEEGPTPRSFHSMAADEENVYVFGGVSATarLNTLDSYNIVDKKWfhc 309
Cdd:COG3055   171 KILVIGGRNGSGFSNTW-------------TTLAPLPTARAGHAAAVLGGKILVFGGESGF--SDEVEAYDPATNTW--- 232

                         170       180
                  ....*....|....*....|....*
gi 1789582719 310 STPGDSLTARGGAGLEVVQGKVWVV 334
Cdd:COG3055   233 TALGELPTPRHGHAAVLTDGKVYVI 257
PHA03098 PHA03098
kelch-like protein; Provisional
 166-306 2.06e-09

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 59.78  E-value: 2.06e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 166 RCSHGIAQVGNKIYSFGGEFTpNQPIDKHLYVFDLETRTWSISPATgDVPHLsclGVRMVSVGSTLYVFGGR---DASRQ 242
Cdd:PHA03098  380 RYNPCVVNVNNLIYVIGGISK-NDELLKTVECFSLNTNKWSKGSPL-PISHY---GGCAIYHDGKIYVIGGIsyiDNIKV 454

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1789582719 243 YNGFYSFDTTTNEWKLLTPVEegpTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKW 306
Cdd:PHA03098  455 YNIVESYNPVTNKWTELSSLN---FPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTNTW 515
Kelch_3 pfam13415
Galactose oxidase, central domain;
228-277 5.65e-09

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 51.91  E-value: 5.65e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1789582719 228 GSTLYVFGGRDASRQ--YNGFYSFDTTTNEWKlltPVEEGPTPRSFHSMAAD 277
Cdd:pfam13415   1 GDKLYIFGGLGFDGQtrLNDLYVYDLDTNTWT---QIGDLPPPRSGHSATYI 49
PHA03098 PHA03098
kelch-like protein; Provisional
 166-356 5.95e-09

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 58.24  E-value: 5.95e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 166 RCSHGIAQVGNKIYSFGGEFTPNQPIDKhLYVFDLETRTWsispatGDVPHL----SCLGVrmVSVGSTLYVFGGRDASR 241
Cdd:PHA03098  285 VYCFGSVVLNNVIYFIGGMNKNNLSVNS-VVSYDTKTKSW------NKVPELiyprKNPGV--TVFNNRIYVIGGIYNSI 355

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 242 QYNGFYSFDTTTNEWKLLTPVEEgptPRSFHSMAADEENVYVFGGVSAT-ARLNTLDSYNIVDKKWFHCSTPGDSLTarg 320
Cdd:PHA03098  356 SLNTVESWKPGESKWREEPPLIF---PRYNPCVVNVNNLIYVIGGISKNdELLKTVECFSLNTNKWSKGSPLPISHY--- 429

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1789582719 321 GAGLEVVQGKVWVVYGF----NGCEVDDVHYYDPVQDKWT 356
Cdd:PHA03098  430 GGCAIYHDGKIYVIGGIsyidNIKVYNIVESYNPVTNKWT 469
PHA03098 PHA03098
kelch-like protein; Provisional
 140-355 6.97e-09

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 57.86  E-value: 6.97e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 140 YVSLSSTTKL------LGKWIKVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVF-----DLETRTWSIS 208
Cdd:PHA03098  201 FLSEEGIKKLkrwklrIKKKKIVFNKRCIKIIYSKKYNLNKILPRSSTFGSIIYIHITMSIFTYNyitnySPLSEINTII 280

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 209 patgDVPHLSCLGVrmVSVGSTLYVFGGRDASRQ-YNGFYSFDTTTNEWKLLTPVEegpTPRSFHSMAADEENVYVFGGV 287
Cdd:PHA03098  281 ----DIHYVYCFGS--VVLNNVIYFIGGMNKNNLsVNSVVSYDTKTKSWNKVPELI---YPRKNPGVTVFNNRIYVIGGI 351

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 288 SATARLNTLDSYNIVDKKWfhcSTPGDSLTARGGAGLEVVQGKVWVVYGF--NGCEVDDVHYYDPVQDKW 355
Cdd:PHA03098  352 YNSISLNTVESWKPGESKW---REEPPLIFPRYNPCVVNVNNLIYVIGGIskNDELLKTVECFSLNTNKW 418
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 318-358 1.48e-06

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 44.91  E-value: 1.48e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1789582719 318 ARGGAGLEVVQGKVWVVYGFNG-CEVDDVHYYDPVQDKWTQV 358
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFDGnQSLNSVEVYDPETNTWSKL 42
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 219-261 7.79e-06

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 42.98  E-value: 7.79e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1789582719 219 CLGVRMVSVGSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTP 261
Cdd:pfam01344   2 RSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPS 44
Kelch_6 pfam13964
Kelch motif;
166-206 1.63e-05

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 41.94  E-value: 1.63e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1789582719 166 RCSHGIAQVGNKIYSFGGEFTPNQPIDKhLYVFDLETRTWS 206
Cdd:pfam13964   2 RTFHSVVSVGGYIYVFGGYTNASPALNK-LEVYNPLTKSWE 41
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 166-209 4.10e-05

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 40.67  E-value: 4.10e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1789582719 166 RCSHGIAQVGNKIYSFGGeFTPNQPIDKhLYVFDLETRTWSISP 209
Cdd:pfam01344   2 RSGAGVVVVGGKIYVIGG-FDGNQSLNS-VEVYDPETNTWSKLP 43
Kelch_4 pfam13418
Galactose oxidase, central domain;
166-210 4.40e-05

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 40.67  E-value: 4.40e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1789582719 166 RCSHGIAQVGN-KIYSFGGEFTPNQPIDkHLYVFDLETRTWSISPA 210
Cdd:pfam13418   2 RAYHTSTSIPDdTIYLFGGEGEDGTLLS-DLWVFDLSTNEWTRLGS 46
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 268-306 6.38e-05

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 40.29  E-value: 6.38e-05
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1789582719 268 PRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKW 306
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTW 39
PRK14131 PRK14131
N-acetylneuraminate epimerase;
224-417 8.08e-05

N-acetylneuraminate epimerase;


Pssm-ID: 237617 [Multi-domain]  Cd Length: 376  Bit Score: 44.62  E-value: 8.08e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 224 MVSVGSTLYVFGG-----RDASRQ-YNGFYSFDTTTNEW-KLLTpveegPTPRSF---HSMAADEENVYVFGGVSatarL 293
Cdd:PRK14131   80 AAFIDGKLYVFGGigktnSEGSPQvFDDVYKYDPKTNSWqKLDT-----RSPVGLaghVAVSLHNGKAYITGGVN----K 150

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 294 NTLDSY----NIVDKKwfhcSTPGDSLTARggaglevVQGKVWVVYGFNgcevDDVHYYDPVQDKWtqvETFGVRP-SER 368
Cdd:PRK14131  151 NIFDGYfedlAAAGKD----KTPKDKINDA-------YFDKKPEDYFFN----KEVLSYDPSTNQW---KNAGESPfLGT 212

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1789582719 369 SVFASAALGKHIVIFGGEIAmdplahvgPGQLTDGTFALDT--ETLQWERL 417
Cdd:PRK14131  213 AGSAVVIKGNKLWLINGEIK--------PGLRTDAVKQGKFtgNNLKWQKL 255
Kelch_6 pfam13964
Kelch motif;
268-310 1.59e-04

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 39.24  E-value: 1.59e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1789582719 268 PRSFHSMAADEENVYVFGG-VSATARLNTLDSYNIVDKKWFHCS 310
Cdd:pfam13964   1 PRTFHSVVSVGGYIYVFGGyTNASPALNKLEVYNPLTKSWEELP 44
Kelch smart00612
Kelch domain;
231-276 2.39e-04

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 38.69  E-value: 2.39e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1789582719  231 LYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVeegPTPRSFHSMAA 276
Cdd:smart00612   2 IYVVGGFDGGQRLKSVEVYDPETNKWTPLPSM---PTPRSGHGVAV 44
Kelch_6 pfam13964
Kelch motif;
224-269 3.30e-04

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 38.47  E-value: 3.30e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1789582719 224 MVSVGSTLYVFGGR-DASRQYNGFYSFDTTTNEWKLLTPVeegPTPR 269
Cdd:pfam13964   7 VVSVGGYIYVFGGYtNASPALNKLEVYNPLTKSWEELPPL---PTPR 50
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
155-256 7.40e-04

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 41.29  E-value: 7.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 155 KVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIdkhlYVFDLETRTWSispATGDVPHlSCLGVRMVSVGSTLYVF 234
Cdd:COG3055   186 TWTTLAPLPTARAGHAAAVLGGKILVFGGESGFSDEV----EAYDPATNTWT---ALGELPT-PRHGHAAVLTDGKVYVI 257

                          90       100
                  ....*....|....*....|..
gi 1789582719 235 GGRDAsrqyNGFYSFDTTTNEW 256
Cdd:COG3055   258 GGETK----PGVRTPLVTSAEV 275
PHA03098 PHA03098
kelch-like protein; Provisional
 243-414 2.06e-03

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 40.52  E-value: 2.06e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 243 YNGFYSFDTTTNEWKLLTpveEGPTPRSFHSMAADEeNVYVFGGV-SATARLNTLDSYNIVDKKWFHcsTPgDSLTARGG 321
Cdd:PHA03098  263 TYNYITNYSPLSEINTII---DIHYVYCFGSVVLNN-VIYFIGGMnKNNLSVNSVVSYDTKTKSWNK--VP-ELIYPRKN 335

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 322 AGLEVVQGKVWVVYG-FNGCEVDDVHYYDPVQDKWTQvETFGVRPseRSVFASAALGKHIVIFGGEIAMDplahvgpgQL 400
Cdd:PHA03098  336 PGVTVFNNRIYVIGGiYNSISLNTVESWKPGESKWRE-EPPLIFP--RYNPCVVNVNNLIYVIGGISKND--------EL 404

                         170
                  ....*....|....
gi 1789582719 401 TDGTFALDTETLQW 414
Cdd:PHA03098  405 LKTVECFSLNTNKW 418
PRK14131 PRK14131
N-acetylneuraminate epimerase;
275-385 2.23e-03

N-acetylneuraminate epimerase;


Pssm-ID: 237617 [Multi-domain]  Cd Length: 376  Bit Score: 40.00  E-value: 2.23e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789582719 275 AADEENVYVFGGVSATA--RLNTLDSynivDKKWFHCST-PGdslTARGGAGLEVVQGKVWVVYGFNGCE-------VDD 344
Cdd:PRK14131   35 AIDNNTVYVGLGSAGTSwyKLDLNAP----SKGWTKIAAfPG---GPREQAVAAFIDGKLYVFGGIGKTNsegspqvFDD 107

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1789582719 345 VHYYDPVQDKWTQVETfgVRPSERSVFASAAL-GKHIVIFGG 385
Cdd:PRK14131  108 VYKYDPKTNSWQKLDT--RSPVGLAGHVAVSLhNGKAYITGG 147
Kelch_2 pfam07646
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 166-210 2.36e-03

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 462220 [Multi-domain]  Cd Length: 47  Bit Score: 35.77  E-value: 2.36e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1789582719 166 RCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPA 210
Cdd:pfam07646   2 RYPHASSVPGGKLYVVGGSDGLGDLSSSDVLVYDPETNVWTEVPR 46
Kelch smart00612
Kelch domain;
281-329 3.21e-03

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 35.61  E-value: 3.21e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 1789582719  281 VYVFGGVSATARLNTLDSYNIVDKKWfhcsTPGDSL-TARGGAGLEVVQG 329
Cdd:smart00612   2 IYVVGGFDGGQRLKSVEVYDPETNKW----TPLPSMpTPRSGHGVAVING 47
Kelch_4 pfam13418
Galactose oxidase, central domain;
268-306 3.69e-03

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 35.28  E-value: 3.69e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1789582719 268 PRSFHSMAADEEN-VYVFGG-VSATARLNTLDSYNIVDKKW 306
Cdd:pfam13418   1 PRAYHTSTSIPDDtIYLFGGeGEDGTLLSDLWVFDLSTNEW 41
Kelch_4 pfam13418
Galactose oxidase, central domain;
224-262 8.37e-03

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 34.51  E-value: 8.37e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1789582719 224 MVSVGS-TLYVFGGRDASRQ-YNGFYSFDTTTNEWKLLTPV 262
Cdd:pfam13418   7 STSIPDdTIYLFGGEGEDGTlLSDLWVFDLSTNEWTRLGSL 47
Kelch_5 pfam13854
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 266-299 8.92e-03

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 433528 [Multi-domain]  Cd Length: 41  Bit Score: 34.08  E-value: 8.92e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1789582719 266 PTPRSFHSMAADEENVYVFGGVSATARLNTLDSY 299
Cdd:pfam13854   1 PVPRYGHCAVTVGDYIYLYGGYTGGEGQPSDDVY 34
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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