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Conserved domains on  [gi|1789589112|emb|CAA0374342|]
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unnamed protein product [Arabidopsis thaliana]

Protein Classification

caleosin family protein( domain architecture ID 10523582)

caleosin family protein similar to plant calcium-binding peroxygenase involved in the degradation of storage lipid in oil bodies

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Caleosin pfam05042
Caleosin related protein; This family contains plant proteins related to caleosin. Caleosins ...
 57-225 1.85e-112

Caleosin related protein; This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies. This family is probably related to EF hands pfam00036.


:

Pssm-ID: 428275  Cd Length: 169  Bit Score: 319.41  E-value: 1.85e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789589112  57 KGMSVMQQHVAFFDQNDDGIVYPWETYKGFRDLGFNPISSIFWTLLINLAFSYVTLPSWVPSPLLPVYIDNIHKAKHGSD 136
Cdd:pfam05042   1 KNMTVLQQHVAFFDRDKDGIIYPWDTYRGFRALGFGILLSLLAALIIHGNLSYPTRPSWLPDPFFRIYVKNIHKAKHGSD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789589112 137 SSTYDTEGRYVPVNLENIFSKYALTVKDKLSFKEVWNVTEGNRMAIDPFGWLSNKVEWILLYILAKDEDGFLSKEAVRGC 216
Cdd:pfam05042  81 SGTYDTEGRFVPQKFEEIFSKYAKTGKDALTLGELWRMLKGNRDAFDPFGWAAAFFEWGALYLLLWDKDGRLRKEDVRGV 160


                  ....*....
gi 1789589112 217 FDGSLFEQI 225
Cdd:pfam05042 161 YDGSLFYKI 169
 
Name Accession Description Interval E-value
Caleosin pfam05042
Caleosin related protein; This family contains plant proteins related to caleosin. Caleosins ...
 57-225 1.85e-112

Caleosin related protein; This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies. This family is probably related to EF hands pfam00036.


Pssm-ID: 428275  Cd Length: 169  Bit Score: 319.41  E-value: 1.85e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789589112  57 KGMSVMQQHVAFFDQNDDGIVYPWETYKGFRDLGFNPISSIFWTLLINLAFSYVTLPSWVPSPLLPVYIDNIHKAKHGSD 136
Cdd:pfam05042   1 KNMTVLQQHVAFFDRDKDGIIYPWDTYRGFRALGFGILLSLLAALIIHGNLSYPTRPSWLPDPFFRIYVKNIHKAKHGSD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789589112 137 SSTYDTEGRYVPVNLENIFSKYALTVKDKLSFKEVWNVTEGNRMAIDPFGWLSNKVEWILLYILAKDEDGFLSKEAVRGC 216
Cdd:pfam05042  81 SGTYDTEGRFVPQKFEEIFSKYAKTGKDALTLGELWRMLKGNRDAFDPFGWAAAFFEWGALYLLLWDKDGRLRKEDVRGV 160


                  ....*....
gi 1789589112 217 FDGSLFEQI 225
Cdd:pfam05042 161 YDGSLFYKI 169
 
Name Accession Description Interval E-value
Caleosin pfam05042
Caleosin related protein; This family contains plant proteins related to caleosin. Caleosins ...
 57-225 1.85e-112

Caleosin related protein; This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies. This family is probably related to EF hands pfam00036.


Pssm-ID: 428275  Cd Length: 169  Bit Score: 319.41  E-value: 1.85e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789589112  57 KGMSVMQQHVAFFDQNDDGIVYPWETYKGFRDLGFNPISSIFWTLLINLAFSYVTLPSWVPSPLLPVYIDNIHKAKHGSD 136
Cdd:pfam05042   1 KNMTVLQQHVAFFDRDKDGIIYPWDTYRGFRALGFGILLSLLAALIIHGNLSYPTRPSWLPDPFFRIYVKNIHKAKHGSD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789589112 137 SSTYDTEGRYVPVNLENIFSKYALTVKDKLSFKEVWNVTEGNRMAIDPFGWLSNKVEWILLYILAKDEDGFLSKEAVRGC 216
Cdd:pfam05042  81 SGTYDTEGRFVPQKFEEIFSKYAKTGKDALTLGELWRMLKGNRDAFDPFGWAAAFFEWGALYLLLWDKDGRLRKEDVRGV 160


                  ....*....
gi 1789589112 217 FDGSLFEQI 225
Cdd:pfam05042 161 YDGSLFYKI 169
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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