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Conserved domains on  [gi|1877622074|dbj|BBT84443|]
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FUSC family protein [Raoultella ornithinolytica]

Protein Classification

FUSC family protein( domain architecture ID 11441727)

FUSC family protein containing a fusaric acid resistance protein (FUSC_2) domain; may be involved in membrane transport

Gene Ontology:  GO:0055085|GO:0022857|GO:0005886
TCDB:  2.A.85

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
YccC COG1289
Uncharacterized membrane protein YccC [Function unknown];
16-247 9.29e-44

Uncharacterized membrane protein YccC [Function unknown];


:

Pssm-ID: 440900 [Multi-domain]  Cd Length: 280  Bit Score: 152.09  E-value: 9.29e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1877622074  16 RHYRVVHGIRIALAFVLTFLLVRLLNVPEGTWPLITLVVVMGPisFWGNVVPRAFERIGGTILGSALGLVALKLeLISLP 95
Cdd:COG1289    43 DSPAFRHALRLALAALLALLIALLLGLPHPYWALLTVLIVLQP--SYGATLSRALQRILGTLLGALAGLLLLAL-FPQPL 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1877622074  96 VMVLWCAVAMFLCgWLALGKKPYQALLIGITLAVVVGAP---PGDMHTALWRSGDVIFGSLLAMLFTG-IWPQRAFLHWR 171
Cdd:COG1289   120 LLLLALALVLGLC-FFALLTRSYAFALAGITAAVVLLFAllgPGVFDVALARVLDTLIGILIALLVSYlLWPRWARRRLR 198
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1877622074 172 IQMANYVTAFNRLYQAGFSP-NLVERPRLEKHLQKVLNDVVKMRGLITPASKET-HIQKAIFEAIQTVSRNLVCMLEL 247
Cdd:COG1289   199 ARLARALRANARYLRALLSQgDPADDLALRAARRRLAAALAALEALLQRALSEPpRGRRRELRALLALNHRLLSLLSA 276
 
Name Accession Description Interval E-value
YccC COG1289
Uncharacterized membrane protein YccC [Function unknown];
16-247 9.29e-44

Uncharacterized membrane protein YccC [Function unknown];


Pssm-ID: 440900 [Multi-domain]  Cd Length: 280  Bit Score: 152.09  E-value: 9.29e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1877622074  16 RHYRVVHGIRIALAFVLTFLLVRLLNVPEGTWPLITLVVVMGPisFWGNVVPRAFERIGGTILGSALGLVALKLeLISLP 95
Cdd:COG1289    43 DSPAFRHALRLALAALLALLIALLLGLPHPYWALLTVLIVLQP--SYGATLSRALQRILGTLLGALAGLLLLAL-FPQPL 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1877622074  96 VMVLWCAVAMFLCgWLALGKKPYQALLIGITLAVVVGAP---PGDMHTALWRSGDVIFGSLLAMLFTG-IWPQRAFLHWR 171
Cdd:COG1289   120 LLLLALALVLGLC-FFALLTRSYAFALAGITAAVVLLFAllgPGVFDVALARVLDTLIGILIALLVSYlLWPRWARRRLR 198
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1877622074 172 IQMANYVTAFNRLYQAGFSP-NLVERPRLEKHLQKVLNDVVKMRGLITPASKET-HIQKAIFEAIQTVSRNLVCMLEL 247
Cdd:COG1289   199 ARLARALRANARYLRALLSQgDPADDLALRAARRRLAAALAALEALLQRALSEPpRGRRRELRALLALNHRLLSLLSA 276
FUSC_2 pfam13515
Fusaric acid resistance protein-like;
32-158 4.08e-14

Fusaric acid resistance protein-like;


Pssm-ID: 433273 [Multi-domain]  Cd Length: 126  Bit Score: 68.04  E-value: 4.08e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1877622074  32 LTFLLVRLLNVPEGTWPLITLVVVMGPisFWGNVVPRAFERIGGTILGSALGLVALKLeLISLPVMVLWCAVAMFLCGWl 111
Cdd:pfam13515   1 LAALIAELLGLPRGYWAPIAAAIVLQP--TLGATLRRAVQRILGTVLGVLLGLLLLAL-LPGPLQLILVVALLGFLAEY- 76
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1877622074 112 aLGKKPYQALLIGITLAVVVGA----PPGDMHTALWRSGDVIFGSLLAMLF 158
Cdd:pfam13515  77 -LIGRNYALAQVFVTPLALLLAslagGGGPPELALLRILDTLIGALIALLV 126
 
Name Accession Description Interval E-value
YccC COG1289
Uncharacterized membrane protein YccC [Function unknown];
16-247 9.29e-44

Uncharacterized membrane protein YccC [Function unknown];


Pssm-ID: 440900 [Multi-domain]  Cd Length: 280  Bit Score: 152.09  E-value: 9.29e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1877622074  16 RHYRVVHGIRIALAFVLTFLLVRLLNVPEGTWPLITLVVVMGPisFWGNVVPRAFERIGGTILGSALGLVALKLeLISLP 95
Cdd:COG1289    43 DSPAFRHALRLALAALLALLIALLLGLPHPYWALLTVLIVLQP--SYGATLSRALQRILGTLLGALAGLLLLAL-FPQPL 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1877622074  96 VMVLWCAVAMFLCgWLALGKKPYQALLIGITLAVVVGAP---PGDMHTALWRSGDVIFGSLLAMLFTG-IWPQRAFLHWR 171
Cdd:COG1289   120 LLLLALALVLGLC-FFALLTRSYAFALAGITAAVVLLFAllgPGVFDVALARVLDTLIGILIALLVSYlLWPRWARRRLR 198
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1877622074 172 IQMANYVTAFNRLYQAGFSP-NLVERPRLEKHLQKVLNDVVKMRGLITPASKET-HIQKAIFEAIQTVSRNLVCMLEL 247
Cdd:COG1289   199 ARLARALRANARYLRALLSQgDPADDLALRAARRRLAAALAALEALLQRALSEPpRGRRRELRALLALNHRLLSLLSA 276
FUSC_2 pfam13515
Fusaric acid resistance protein-like;
32-158 4.08e-14

Fusaric acid resistance protein-like;


Pssm-ID: 433273 [Multi-domain]  Cd Length: 126  Bit Score: 68.04  E-value: 4.08e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1877622074  32 LTFLLVRLLNVPEGTWPLITLVVVMGPisFWGNVVPRAFERIGGTILGSALGLVALKLeLISLPVMVLWCAVAMFLCGWl 111
Cdd:pfam13515   1 LAALIAELLGLPRGYWAPIAAAIVLQP--TLGATLRRAVQRILGTVLGVLLGLLLLAL-LPGPLQLILVVALLGFLAEY- 76
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1877622074 112 aLGKKPYQALLIGITLAVVVGA----PPGDMHTALWRSGDVIFGSLLAMLF 158
Cdd:pfam13515  77 -LIGRNYALAQVFVTPLALLLAslagGGGPPELALLRILDTLIGALIALLV 126
YgaE COG4129
Uncharacterized membrane protein YgaE, UPF0421/DUF939 family [Function unknown];
24-187 2.61e-11

Uncharacterized membrane protein YgaE, UPF0421/DUF939 family [Function unknown];


Pssm-ID: 443305 [Multi-domain]  Cd Length: 197  Bit Score: 61.93  E-value: 2.61e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1877622074  24 IRIALAFVLTFLLVRLLNVPEGTWPLITLVVVMGPiSFWGNVVpRAFERIGGTILGSALGLVALKL---ELISLPVMVLw 100
Cdd:COG4129    15 LKTALAAALAWLIAELLGLPYPFFAAIAAVLCLQP-TVGRSLR-RALERILGVLIGALVGVLFFLLlgyGPWQLGLAVL- 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1877622074 101 caVAMFLCGWLALGkkpYQALLIGITLAVVV--GAPPGDMHTALWRSGDVIFGSLLAMLFT-GIWPQRAFLHWRIQMANY 177
Cdd:COG4129    92 --LAILLAVLLKLG---EGIVLAAVTALLVLllGSPDDSLGYALNRLLDTLIGVGVALLVNlLLLPPDPERRLRRAAAEL 166
                         170
                  ....*....|
gi 1877622074 178 VTAFNRLYQA 187
Cdd:COG4129   167 LEELADILRE 176
FUSC pfam04632
Fusaric acid resistance protein family; This family includes a conserved region found in two ...
20-224 4.84e-09

Fusaric acid resistance protein family; This family includes a conserved region found in two proteins associated with fusaric acid resistance, from Burkholderia cepacia and Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.


Pssm-ID: 428044 [Multi-domain]  Cd Length: 655  Bit Score: 57.68  E-value: 4.84e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1877622074  20 VVHGIRIALAFVLTFLLVRLLNVPEGTWPLITLVVVMGPISfwGNVVPRAFERIGGTILGSALGLVALKLeLISLPVM-V 98
Cdd:pfam04632   1 WLFALKTFLAAMLALYIALRLELPQPYWAMTTVFIVSQPLS--GAVLSKSFYRLLGTLVGAAAAVLLVAL-FVQAPLLfL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1877622074  99 LWCAVAMFLCGWLAL---GKKPYQALLIGITLAVV----VGAPPGDMHTALWRSGDVIFGSLLAMLFTGI-WPQRAFLHW 170
Cdd:pfam04632  78 LALALWIGLCLALSLldrNFRSYAFVLAGYTAAIIglpaVADPEAIFDIAVARVSEISLGILCAALVSALvFPRSVGPAL 157
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1877622074 171 RIQMANYVTAFNRLYQAGFSPNLvERPRLEKHLQKVLNDVVKMRGLITPASKET 224
Cdd:pfam04632 158 RARLRARLRDALRLAAAALAGAP-GAEAFEAARLRLAADILALEALRSHAAFES 210
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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