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mKIAA4091 protein, partial [Mus musculus]
Protein Classification
kinesin family protein ( domain architecture ID 13531091 )
kinesin family protein is a microtubule-dependent molecular motor that plays an important role in intracellular transport and in cell division and has ATPase-containing motor domain; similar to carboxy-terminal kinesins that contains a C-terminal domain responsible for the motor activity (it hydrolyzes ATP and binds microtubules)
List of domain hits
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
459-656
7.64e-89
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 280.23
E-value: 7.64e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 459 ERDKL L R Y RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS I SY Q TDRTD Q TP C TP ED DL E EG M A K EE T ELRFRQLT M 537
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TP DE DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 538 EYQALQRAYALLQEQ V GGTLDAERE V KTREQLQAE IQ RAQ T R V EDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 617
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE A KTREQLQAE LR RAQ S R I EDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*....
gi 60360524 618 E T EE A RLK H E V QDA K DQNELLEFRILELEERER K SPAIN 656
Cdd:pfam16034 161 E Q EE G RLK N E I QDA R DQNELLEFRILELEERER R SPAIN 199
Smc super family
cl34174 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
43-649
5.03e-10
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
COG1196 :Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 63.42
E-value: 5.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 43 D KAE TLAA L QAANE EL R A K L TDIQIELQQEKSKVSKV E R E KSQELKQVR E H E QRKHAVLVT EL KTK L H E EK m K EL QAVRE 122
Cdd:COG1196 210 E KAE RYRE L KEELK EL E A E L LLLKLRELEAELEELEA E L E ELEAELEEL E A E LAELEAELE EL RLE L E E LE - L EL EEAQA 288
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 123 A l LRQHE AEL L R VIKIKDNENQ R LQA L LNT L rdgapdkvktvllc E AK EE AKKGF E V E KVKMQQ E IS EL KGAKKQV EE A L 202
Cdd:COG1196 289 E - EYELL AEL A R LEQDIARLEE R RRE L EER L -------------- E EL EE ELAEL E E E LEELEE E LE EL EEELEEA EE E L 353
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 203 TMVIQADKIKAAEIRSVYHLHQ E EITRIKKEC E REIRR L MEEIRFKDRAV f V LE RELGVQAGHAQ RL QLQK E A L D E Q L SQ 282
Cdd:COG1196 354 EEAEAELAEAEEALLEAEAELA E AEEELEELA E ELLEA L RAAAELAAQLE - E LE EAEEALLERLE RL EEEL E E L E E A L AE 432
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 283 AK E A E R hpgsprrelpyasgagdasdhsgsp E QQLDEKD A RRFQLKIA E LSAIIRK L EDRNALLSEERNEL L KR L R E AES 362
Cdd:COG1196 433 LE E E E E ------------------------- E EEEALEE A AEEEAELE E EEEALLE L LAELLEEAALLEAA L AE L L E ELA 487
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 363 QYKPL L DKNKRLTRKN E DLSHTLRRIESKLK fvtqeniemrqr AGIIRRPSSLNDLDQSQD E REID f LK L QIVE Q QNLID 442
Cdd:COG1196 488 EAAAR L LLLLEAEADY E GFLEGVKAALLLAG ------------ LRGLAGAVAVLIGVEAAY E AALE - AA L AAAL Q NIVVE 554
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 443 ELSKTLETAG Y V K S - VLE R DKL L RYR K Q R KKM A KLPKPVVVETFFGY D EE AS LESDGSSIS Y Q - T D RTDQTPCTPEDDLE 520
Cdd:COG1196 555 DDEVAAAAIE Y L K A a KAG R ATF L PLD K I R ARA A LAAALARGAIGAAV D LV AS DLREADARY Y V l G D TLLGRTLVAARLEA 634
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 521 EGMAKEETEL R F R QL T M E YQALQRAYA L LQEQVGGT L D A ER E VKTREQLQ AE IQRAQTRVEDLEKALA E QGQDMKWIE E K 600
Cdd:COG1196 635 ALRRAVTLAG R L R EV T L E GEGGSAGGS L TGGSRREL L A A LL E AEAELEEL AE RLAEEELELEEALLAE E EEERELAEA E E 714
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 60360524 601 QA L YRRNQ E LVEKIKQMETE E AR L KHEVQDAKDQN E LLEFRIL E LEER E 649
Cdd:COG1196 715 ER L EEELE E EALEEQLEAER E EL L EELLEEEELLE E EALEELP E PPDL E 763
Smc super family
cl34174 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
524-844
2.82e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
COG1196 :Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 48.01
E-value: 2.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 524 AK EE TE L RFRQ L TM E YQAL Q RAYAL L QEQVGG -------- TLDAEREVKTR E Q L QA E IQRAQTRV E D LE KA L A E QGQD mk 595
Cdd:COG1196 268 EL EE LR L ELEE L EL E LEEA Q AEEYE L LAELAR leqdiarl EERRRELEERL E E L EE E LAELEEEL E E LE EE L E E LEEE -- 345
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 596 w I EE KQALYRRNQELVEKIKQMET E EARLKH E VQDAKDQNELLEFRI L ELEERERKSPA infhhtpfvdgksplqvyc E A 675
Cdd:COG1196 346 - L EE AEEELEEAEAELAEAEEALL E AEAELA E AEEELEELAEELLEA L RAAAELAAQLE ------------------- E L 405
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 676 E GVTDI L VTE L MKKLDI L GDNANLTN E EQVVVIQARTV L TL A EKWLQRI EE T E S AL QRKMVD L ES E KE L fskqkgy L DEE 755
Cdd:COG1196 406 E EAEEA L LER L ERLEEE L EELEEALA E LEEEEEEEEEA L EE A AEEEAEL EE E E E AL LELLAE L LE E AA L ------- L EAA 478
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 756 L DYRKQA L DQ A HKHI L E L EAMLY D ALQQEA G A K V A E LL SEEEREKLK VAV EQWKRQVMSELR E -- RD A QILRERM E LLQI 833
Cdd:COG1196 479 L AELLEE L AE A AARL L L L LEAEA D YEGFLE G V K A A L LL AGLRGLAGA VAV LIGVEAAYEAAL E aa LA A ALQNIVV E DDEV 558
330
....*....|.
gi 60360524 834 A QQR I KE L EER 844
Cdd:COG1196 559 A AAA I EY L KAA 569
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
459-656
7.64e-89
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 280.23
E-value: 7.64e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 459 ERDKL L R Y RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS I SY Q TDRTD Q TP C TP ED DL E EG M A K EE T ELRFRQLT M 537
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TP DE DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 538 EYQALQRAYALLQEQ V GGTLDAERE V KTREQLQAE IQ RAQ T R V EDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 617
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE A KTREQLQAE LR RAQ S R I EDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*....
gi 60360524 618 E T EE A RLK H E V QDA K DQNELLEFRILELEERER K SPAIN 656
Cdd:pfam16034 161 E Q EE G RLK N E I QDA R DQNELLEFRILELEERER R SPAIN 199
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
43-649
5.03e-10
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 63.42
E-value: 5.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 43 D KAE TLAA L QAANE EL R A K L TDIQIELQQEKSKVSKV E R E KSQELKQVR E H E QRKHAVLVT EL KTK L H E EK m K EL QAVRE 122
Cdd:COG1196 210 E KAE RYRE L KEELK EL E A E L LLLKLRELEAELEELEA E L E ELEAELEEL E A E LAELEAELE EL RLE L E E LE - L EL EEAQA 288
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 123 A l LRQHE AEL L R VIKIKDNENQ R LQA L LNT L rdgapdkvktvllc E AK EE AKKGF E V E KVKMQQ E IS EL KGAKKQV EE A L 202
Cdd:COG1196 289 E - EYELL AEL A R LEQDIARLEE R RRE L EER L -------------- E EL EE ELAEL E E E LEELEE E LE EL EEELEEA EE E L 353
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 203 TMVIQADKIKAAEIRSVYHLHQ E EITRIKKEC E REIRR L MEEIRFKDRAV f V LE RELGVQAGHAQ RL QLQK E A L D E Q L SQ 282
Cdd:COG1196 354 EEAEAELAEAEEALLEAEAELA E AEEELEELA E ELLEA L RAAAELAAQLE - E LE EAEEALLERLE RL EEEL E E L E E A L AE 432
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 283 AK E A E R hpgsprrelpyasgagdasdhsgsp E QQLDEKD A RRFQLKIA E LSAIIRK L EDRNALLSEERNEL L KR L R E AES 362
Cdd:COG1196 433 LE E E E E ------------------------- E EEEALEE A AEEEAELE E EEEALLE L LAELLEEAALLEAA L AE L L E ELA 487
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 363 QYKPL L DKNKRLTRKN E DLSHTLRRIESKLK fvtqeniemrqr AGIIRRPSSLNDLDQSQD E REID f LK L QIVE Q QNLID 442
Cdd:COG1196 488 EAAAR L LLLLEAEADY E GFLEGVKAALLLAG ------------ LRGLAGAVAVLIGVEAAY E AALE - AA L AAAL Q NIVVE 554
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 443 ELSKTLETAG Y V K S - VLE R DKL L RYR K Q R KKM A KLPKPVVVETFFGY D EE AS LESDGSSIS Y Q - T D RTDQTPCTPEDDLE 520
Cdd:COG1196 555 DDEVAAAAIE Y L K A a KAG R ATF L PLD K I R ARA A LAAALARGAIGAAV D LV AS DLREADARY Y V l G D TLLGRTLVAARLEA 634
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 521 EGMAKEETEL R F R QL T M E YQALQRAYA L LQEQVGGT L D A ER E VKTREQLQ AE IQRAQTRVEDLEKALA E QGQDMKWIE E K 600
Cdd:COG1196 635 ALRRAVTLAG R L R EV T L E GEGGSAGGS L TGGSRREL L A A LL E AEAELEEL AE RLAEEELELEEALLAE E EEERELAEA E E 714
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 60360524 601 QA L YRRNQ E LVEKIKQMETE E AR L KHEVQDAKDQN E LLEFRIL E LEER E 649
Cdd:COG1196 715 ER L EEELE E EALEEQLEAER E EL L EELLEEEELLE E EALEELP E PPDL E 763
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
38-846
2.62e-09
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 61.23
E-value: 2.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 38 S RA K GDKA ET LAA L QAAN E E L r AK L T DI ------ Q IELQQEKSKVSKVER E KSQ EL KQV --------- R E HEQRKHAVLV 102
Cdd:TIGR02168 168 S KY K ERRK ET ERK L ERTR E N L - DR L E DI lneler Q LKSLERQAEKAERYK E LKA EL REL elallvlrl E E LREELEELQE 246
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 103 TELKTKLHE E KMKELQAVR E AL L RQHEA E LLRVIKIKDNENQR L Q AL L N TLRDGAPD K VKTVLLCEAK E EAKKGF E VEKV 182
Cdd:TIGR02168 247 ELKEAEEEL E ELTAELQEL E EK L EELRL E VSELEEEIEELQKE L Y AL A N EISRLEQQ K QILRERLANL E RQLEEL E AQLE 326
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 183 KMQQEIS EL KGAKKQV EE A L TMV iq ADKIKAA E IR svyhlh Q EE ITRIKK E C E REIRR L M E EIRFKDRA V FV LE RELGVQ 262
Cdd:TIGR02168 327 ELESKLD EL AEELAEL EE K L EEL -- KEELESL E AE ------ L EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASL 398
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 263 AGHAQ RL QLQK E A L DEQLSQAKEAER hpgsprrelpyasgagdasdhsg SPEQQ L D E KDARRF Q LKIA EL SAIIRK L EDR 342
Cdd:TIGR02168 399 NNEIE RL EARL E R L EDRRERLQQEIE ----------------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEE 455
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 343 NAL L S E ERN EL LKR L R EAE SQYKPLLDKNKR L TRKNED L SHTLRRI E SKLKF V TQENIEMRQRA GI IRRP S S L NDL D q SQ 422
Cdd:TIGR02168 456 LER L E E ALE EL REE L E EAE QALDAAERELAQ L QARLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGVL S E L ISV D - EG 534
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 423 D E RE I D flklq IVEQQN L IDELSKT L ET A GYVKSV L ERDK L L R yrkqrkk MAK LP KPVVVE T FFGYDEEAS L ESDGSSIS 502
Cdd:TIGR02168 535 Y E AA I E ----- AALGGR L QAVVVEN L NA A KKAIAF L KQNE L G R ------- VTF LP LDSIKG T EIQGNDREI L KNIEGFLG 602
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 503 YQT D RTDQT P ------------ CTPE DDL EEGMA - KEETELRF R QL T MEYQALQRAYALLQ --- EQVGGT L DAE RE V ktr 566
Cdd:TIGR02168 603 VAK D LVKFD P klrkalsyllgg VLVV DDL DNALE l AKKLRPGY R IV T LDGDLVRPGGVITG gsa KTNSSI L ERR RE I --- 679
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 567 E Q L QAE I QRAQTRVED LEKALAE --- QGQDMK wi EE KQA L YRRNQ EL VEK I KQMETEE ARL KH EV QDAKDQNEL L EFRIL 643
Cdd:TIGR02168 680 E E L EEK I EELEEKIAE LEKALAE lrk ELEELE -- EE LEQ L RKELE EL SRQ I SALRKDL ARL EA EV EQLEERIAQ L SKELT 757
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 644 ELE ERERK -------- SPAINFHHTPFVDGKSPLQVYC E AEGVTDILVT EL MKK L DI L GDN A N ----- L TNE E QVVVIQA 710
Cdd:TIGR02168 758 ELE AEIEE leerleea EEELAEAEAEIEELEAQIEQLK E ELKALREALD EL RAE L TL L NEE A A nlrer L ESL E RRIAATE 837
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 711 R TVLT L A E KWLQRI E ET ES A ------ L QRKMVD LESE K E LFSKQKGY L D E E L DYRKQA L DQAHKHIL ELE AMLYDALQ -- 782
Cdd:TIGR02168 838 R RLED L E E QIEELS E DI ES L aaeiee L EELIEE LESE L E ALLNERAS L E E A L ALLRSE L EELSEELR ELE SKRSELRR el 917
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 60360524 783 Q E AGA K V A E L ls E EER E K L K V AVEQWKRQVMS E LR --- E RDAQILRERMELLQI A QQ R I K E LE ER I E 846
Cdd:TIGR02168 918 E E LRE K L A Q L -- E LRL E G L E V RIDNLQERLSE E YS ltl E EAEALENKIEDDEEE A RR R L K R LE NK I K 982
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
524-844
2.82e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 48.01
E-value: 2.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 524 AK EE TE L RFRQ L TM E YQAL Q RAYAL L QEQVGG -------- TLDAEREVKTR E Q L QA E IQRAQTRV E D LE KA L A E QGQD mk 595
Cdd:COG1196 268 EL EE LR L ELEE L EL E LEEA Q AEEYE L LAELAR leqdiarl EERRRELEERL E E L EE E LAELEEEL E E LE EE L E E LEEE -- 345
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 596 w I EE KQALYRRNQELVEKIKQMET E EARLKH E VQDAKDQNELLEFRI L ELEERERKSPA infhhtpfvdgksplqvyc E A 675
Cdd:COG1196 346 - L EE AEEELEEAEAELAEAEEALL E AEAELA E AEEELEELAEELLEA L RAAAELAAQLE ------------------- E L 405
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 676 E GVTDI L VTE L MKKLDI L GDNANLTN E EQVVVIQARTV L TL A EKWLQRI EE T E S AL QRKMVD L ES E KE L fskqkgy L DEE 755
Cdd:COG1196 406 E EAEEA L LER L ERLEEE L EELEEALA E LEEEEEEEEEA L EE A AEEEAEL EE E E E AL LELLAE L LE E AA L ------- L EAA 478
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 756 L DYRKQA L DQ A HKHI L E L EAMLY D ALQQEA G A K V A E LL SEEEREKLK VAV EQWKRQVMSELR E -- RD A QILRERM E LLQI 833
Cdd:COG1196 479 L AELLEE L AE A AARL L L L LEAEA D YEGFLE G V K A A L LL AGLRGLAGA VAV LIGVEAAYEAAL E aa LA A ALQNIVV E DDEV 558
330
....*....|.
gi 60360524 834 A QQR I KE L EER 844
Cdd:COG1196 559 A AAA I EY L KAA 569
PTZ00121
PTZ00121 MAEBL; Provisional
33-411
3.41e-05
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 47.83
E-value: 3.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 33 KK G A GSRA K G D K A ETL A ALQAANE E LRA K LTDIQ iel QQ E KS K VSKV E RE K SQ E L K QVR E h E QR K havl VT E L K T K LH E E 112
Cdd:PTZ00121 1424 KK K A EEKK K A D E A KKK A EEAKKAD E AKK K AEEAK --- KA E EA K KKAE E AK K AD E A K KKA E - E AK K ---- AD E A K K K AE E A 1495
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 113 K m K ELQAVRE A LLRQHE A ELLR viki K DN E NQRLQALLNTLRDGAP D KV K TVLLCEAKE E A KK GF E VE K VKMQQEIS E L K 192
Cdd:PTZ00121 1496 K - K KADEAKK A AEAKKK A DEAK ---- K AE E AKKADEAKKAEEAKKA D EA K KAEEKKKAD E L KK AE E LK K AEEKKKAE E A K 1570
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 193 G A KKQVEE AL TMVIQ A D K IKA A E I RS V YH L HQ EE ITRIKK E C -- ER E IRRLM EE IRFKDRAVFVL E RELGVQ A GHAQRLQ 270
Cdd:PTZ00121 1571 K A EEDKNM AL RKAEE A K K AEE A R I EE V MK L YE EE KKMKAE E A kk AE E AKIKA EE LKKAEEEKKKV E QLKKKE A EEKKKAE 1650
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 271 LQ K E A LD E QLSQ A K E AERHPGSPRRE lpyasgagdasdhsg SP E QQLD E K D ARRFQLKIAELSAIIR K L E DRNALLS EE R 350
Cdd:PTZ00121 1651 EL K K A EE E NKIK A A E EAKKAEEDKKK --------------- AE E AKKA E E D EKKAAEALKKEAEEAK K A E ELKKKEA EE K 1715
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 60360524 351 NE l LKR L RE AE SQY K PLLDKN K RLTRKNEDLSHTLRRI E SKL K FVTQENI E MRQR A GI IR R 411
Cdd:PTZ00121 1716 KK - AEE L KK AE EEN K IKAEEA K KEAEEDKKKAEEAKKD E EEK K KIAHLKK E EEKK A EE IR K 1775
SMC_N
pfam02463 RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ...
36-853
8.65e-05
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain]
Cd Length: 1161
Bit Score: 46.50
E-value: 8.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 36 AGSR A K GD K A E T L AA L QAAN E E L RAKLT D IQIELQ QE KS kv S K VERE K SQ E LK Q VR E HEQRKHAV L VTELKT KL H EE KMK 115
Cdd:pfam02463 163 AGSR L K RK K K E A L KK L IEET E N L AELII D LEELKL QE LK -- L K EQAK K AL E YY Q LK E KLELEEEY L LYLDYL KL N EE RID 240
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 116 E LQ AVREALLRQH E AELLRVI K IKDNEN Q R L QALLNTLRDGAPDKVKTV LL CEAK EE A K KGFEVEKVKMQQEISE LK GAK 195
Cdd:pfam02463 241 L LQ ELLRDEQEEI E SSKQEIE K EEEKLA Q V L KENKEEEKEKKLQEEELK LL AKEE EE L K SELLKLERRKVDDEEK LK ESE 320
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 196 K QVEE A L tmviqa DKI K AAEIRSVYHLHQEEITR IK K E C E R E IRRLM E EIRF K DRA vf VL E RE L GVQAGHAQ RL QLQKEA 275
Cdd:pfam02463 321 K EKKK A E ------ KEL K KEKEEIEELEKELKELE IK R E A E E E EEEEL E KLQE K LEQ -- LE E EL L AKKKLESE RL SSAAKL 392
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 276 LD E Q L SQAK E A E RHPGSPRRELPYASGAGDASDHSGSPEQQLD E KDARRF Q L K IA E LSAIIR K L E DRNALLSE E R n ELLK 355
Cdd:pfam02463 393 KE E E L ELKS E E E KEAQLLLELARQLEDLLKEEKKEELEILEEE E ESIELK Q G K LT E EKEELE K Q E LKLLKDEL E L - KKSE 471
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 356 R L REAESQY K PLLDKNKR L T R KNEDLSHTLR --- R IES K LKFVTQENIEMRQRAGIIR R PSS L NDLDQSQD ------- ER 425
Cdd:pfam02463 472 D L LKETQLV K LQEQLELL L S R QKLEERSQKE ska R SGL K VLLALIKDGVGGRIISAHG R LGD L GVAVENYK vaistav IV 551
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 426 E IDFLKLQIV E Q Q N L IDE L SKTLET A GYVKSVLERD KL LRYRKQRKKMA - K L PKPVVVETFFGY DE EASLESDGSS I SYQ 504
Cdd:pfam02463 552 E VSATADEVE E R Q K L VRA L TELPLG A RKLRLLIPKL KL PLKSIAVLEID p I L NLAQLDKATLEA DE DDKRAKVVEG I LKD 631
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 505 T DR T DQTPCTPEDDLEEGMAKEET E LRFRQLTMEYQALQRAYA LL QE Q VGGTLDAEREV K TREQLQAE - I QRAQT R VEDL 583
Cdd:pfam02463 632 T EL T KLKESAKAKESGLRKGVSLE E GLAEKSEVKASLSELTKE LL EI Q ELQEKAESELA K EEILRRQL e I KKKEQ R EKEE 711
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 584 E K A L AEQGQDMKWIEEKQ A LYRR N Q EL VE - K I K QM E T EE ARL K HEVQDAKDQN E LL E FRIL E L E ER E RKSPAINFHHTPF 662
Cdd:pfam02463 712 L K K L KLEAEELLADRVQE A QDKI N E EL KL l K Q K ID E E EE EEE K SRLKKEEKEE E KS E LSLK E K E LA E EREKTEKLKVEEE 791
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 663 VDG K splqvyc EAEGVTDILVT E LMK K LDILGDNANLTNE EQ VVV I QARTVLT LA EKWLQRIEETES A LQRK mvdle SEK 742
Cdd:pfam02463 792 KEE K ------- LKAQEEELRAL E EEL K EEAELLEEEQLLI EQ EEK I KEEELEE LA LELKEEQKLEKL A EEEL ----- ERL 859
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 743 E LFSKQKGY L D E E L DYRKQALD Q AH K HI LE LEAMLYDALQQ E AGAKVAE L LSE EE R E KLKVAVEQWKRQVMSELR E RDAQ 822
Cdd:pfam02463 860 E EEITKEEL L Q E L L LKEEELEE Q KL K DE LE SKEEKEKEEKK E LEEESQK L NLL EE K E NEIEERIKEEAEILLKYE E EPEE 939
810 820 830
....*....|....*....|....*....|.
gi 60360524 823 I L R E RMELLQIAQQRIK E L EER IETQKRQIK 853
Cdd:pfam02463 940 L L L E EADEKEKEENNKE E E EER NKRLLLAKE 970
PHA03246
PHA03246 large tegument protein UL36; Provisional
430-823
3.46e-04
large tegument protein UL36; Provisional
Pssm-ID: 223020 [Multi-domain]
Cd Length: 3095
Bit Score: 44.58
E-value: 3.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 430 L K L QIV E QQNLI D E L S K T L ETAGYVK S VLER D KLL ryrkqr KK MA K lpkp V V V E TF FG ----- Y D E EA S LE SD GS sisy Q 504
Cdd:PHA03246 709 L T L VAL E VEEAT D T L H K S L DAIEREA S TADP D RIY ------ ER MA T ---- V L V D TF YR nsgkl Y S E TT S YN SD QT ---- L 774
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 505 TDR T d QTP C TPED D L E e GM A KEET EL rfrq LTM E YQ AL QRAYALLQEQV -------- GG TL --- DAEREV KT REQLQAE i 573
Cdd:PHA03246 775 TDR V - VSL C EFIR D R E - NV A TRKA EL ---- ILA E IE AL DAGVRWMNTKF dafimggs GG MS pak GLSAIA KT STDVVTQ - 847
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 574 qraqt R V E DLE KA LAEQ - G QDMKWIEE K Q ALY rrnqelve KI K QMET eearlkhevqdak D QN E LLE F R I LEL E ER E R -- 650
Cdd:PHA03246 848 ----- R L E SIG KA AIDI v G NALREYYL K C ALY -------- SA K ALRA ------------- D MK E TSR F K I VVT E QL E K mt 901
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 651 --- K S PAINFHHTPFVDGK S PLQ V YCE aeg V TDI L VTE L MK kl D I L GDNAN L TNE E QV V VIQART V LTLAEK W LQ R ---- 723
Cdd:PHA03246 902 rll S S LSVIDDVILLIASR S DAR V PVP --- V SKA L ESQ L LG -- D L L EIGSH L DVP E NL V TWKGLM V SVQTGG W IS R reld 976
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 724 -- IE E ---- TES A LQ R KMV -- D LE SEK EL F S KQKG Y L D E E LDYRK Q A LD Q A H K HILEL e AM L YDA L Q qea GAK V A EL LS E 795
Cdd:PHA03246 977 ll LK E vdav NDN A AR R ETA lt E LE RLH EL E S RIAS Y T D L E TTVDL Q K LD E A L K LANSI - VK L TKG L D --- GAK L A SS LS S 1052
410 420 430
....*....|....*....|....*....|.
gi 60360524 796 EE REK LK vave Q WKRQ --- VMSE L RE R D A QI 823
Cdd:PHA03246 1053 DI REK IR ---- Q KRSE tet LIAR L SA R Y A EV 1079
DR0291
COG1579 Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ...
564-648
7.11e-03
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain]
Cd Length: 236
Bit Score: 39.14
E-value: 7.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 564 KTREQ L Q A EIQR A Q T RV EDLEK ALAEQGQDMKWI E EKQAL Y RRNQEL V EKI K QM E T eear L KH E VQDA K DQNEL LE FR IL 643
Cdd:COG1579 38 DELAA L E A RLEA A K T EL EDLEK EIKRLELEIEEV E ARIKK Y EEQLGN V RNN K EY E A ---- L QK E IESL K RRISD LE DE IL 113
....*
gi 60360524 644 EL E ER 648
Cdd:COG1579 114 EL M ER 118
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
459-656
7.64e-89
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 280.23
E-value: 7.64e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 459 ERDKL L R Y RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS I SY Q TDRTD Q TP C TP ED DL E EG M A K EE T ELRFRQLT M 537
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TP DE DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 538 EYQALQRAYALLQEQ V GGTLDAERE V KTREQLQAE IQ RAQ T R V EDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 617
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE A KTREQLQAE LR RAQ S R I EDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*....
gi 60360524 618 E T EE A RLK H E V QDA K DQNELLEFRILELEERER K SPAIN 656
Cdd:pfam16034 161 E Q EE G RLK N E I QDA R DQNELLEFRILELEERER R SPAIN 199
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
43-649
5.03e-10
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 63.42
E-value: 5.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 43 D KAE TLAA L QAANE EL R A K L TDIQIELQQEKSKVSKV E R E KSQELKQVR E H E QRKHAVLVT EL KTK L H E EK m K EL QAVRE 122
Cdd:COG1196 210 E KAE RYRE L KEELK EL E A E L LLLKLRELEAELEELEA E L E ELEAELEEL E A E LAELEAELE EL RLE L E E LE - L EL EEAQA 288
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 123 A l LRQHE AEL L R VIKIKDNENQ R LQA L LNT L rdgapdkvktvllc E AK EE AKKGF E V E KVKMQQ E IS EL KGAKKQV EE A L 202
Cdd:COG1196 289 E - EYELL AEL A R LEQDIARLEE R RRE L EER L -------------- E EL EE ELAEL E E E LEELEE E LE EL EEELEEA EE E L 353
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 203 TMVIQADKIKAAEIRSVYHLHQ E EITRIKKEC E REIRR L MEEIRFKDRAV f V LE RELGVQAGHAQ RL QLQK E A L D E Q L SQ 282
Cdd:COG1196 354 EEAEAELAEAEEALLEAEAELA E AEEELEELA E ELLEA L RAAAELAAQLE - E LE EAEEALLERLE RL EEEL E E L E E A L AE 432
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 283 AK E A E R hpgsprrelpyasgagdasdhsgsp E QQLDEKD A RRFQLKIA E LSAIIRK L EDRNALLSEERNEL L KR L R E AES 362
Cdd:COG1196 433 LE E E E E ------------------------- E EEEALEE A AEEEAELE E EEEALLE L LAELLEEAALLEAA L AE L L E ELA 487
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 363 QYKPL L DKNKRLTRKN E DLSHTLRRIESKLK fvtqeniemrqr AGIIRRPSSLNDLDQSQD E REID f LK L QIVE Q QNLID 442
Cdd:COG1196 488 EAAAR L LLLLEAEADY E GFLEGVKAALLLAG ------------ LRGLAGAVAVLIGVEAAY E AALE - AA L AAAL Q NIVVE 554
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 443 ELSKTLETAG Y V K S - VLE R DKL L RYR K Q R KKM A KLPKPVVVETFFGY D EE AS LESDGSSIS Y Q - T D RTDQTPCTPEDDLE 520
Cdd:COG1196 555 DDEVAAAAIE Y L K A a KAG R ATF L PLD K I R ARA A LAAALARGAIGAAV D LV AS DLREADARY Y V l G D TLLGRTLVAARLEA 634
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 521 EGMAKEETEL R F R QL T M E YQALQRAYA L LQEQVGGT L D A ER E VKTREQLQ AE IQRAQTRVEDLEKALA E QGQDMKWIE E K 600
Cdd:COG1196 635 ALRRAVTLAG R L R EV T L E GEGGSAGGS L TGGSRREL L A A LL E AEAELEEL AE RLAEEELELEEALLAE E EEERELAEA E E 714
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 60360524 601 QA L YRRNQ E LVEKIKQMETE E AR L KHEVQDAKDQN E LLEFRIL E LEER E 649
Cdd:COG1196 715 ER L EEELE E EALEEQLEAER E EL L EELLEEEELLE E EALEELP E PPDL E 763
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
38-846
2.62e-09
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 61.23
E-value: 2.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 38 S RA K GDKA ET LAA L QAAN E E L r AK L T DI ------ Q IELQQEKSKVSKVER E KSQ EL KQV --------- R E HEQRKHAVLV 102
Cdd:TIGR02168 168 S KY K ERRK ET ERK L ERTR E N L - DR L E DI lneler Q LKSLERQAEKAERYK E LKA EL REL elallvlrl E E LREELEELQE 246
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 103 TELKTKLHE E KMKELQAVR E AL L RQHEA E LLRVIKIKDNENQR L Q AL L N TLRDGAPD K VKTVLLCEAK E EAKKGF E VEKV 182
Cdd:TIGR02168 247 ELKEAEEEL E ELTAELQEL E EK L EELRL E VSELEEEIEELQKE L Y AL A N EISRLEQQ K QILRERLANL E RQLEEL E AQLE 326
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 183 KMQQEIS EL KGAKKQV EE A L TMV iq ADKIKAA E IR svyhlh Q EE ITRIKK E C E REIRR L M E EIRFKDRA V FV LE RELGVQ 262
Cdd:TIGR02168 327 ELESKLD EL AEELAEL EE K L EEL -- KEELESL E AE ------ L EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASL 398
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 263 AGHAQ RL QLQK E A L DEQLSQAKEAER hpgsprrelpyasgagdasdhsg SPEQQ L D E KDARRF Q LKIA EL SAIIRK L EDR 342
Cdd:TIGR02168 399 NNEIE RL EARL E R L EDRRERLQQEIE ----------------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEE 455
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 343 NAL L S E ERN EL LKR L R EAE SQYKPLLDKNKR L TRKNED L SHTLRRI E SKLKF V TQENIEMRQRA GI IRRP S S L NDL D q SQ 422
Cdd:TIGR02168 456 LER L E E ALE EL REE L E EAE QALDAAERELAQ L QARLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGVL S E L ISV D - EG 534
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 423 D E RE I D flklq IVEQQN L IDELSKT L ET A GYVKSV L ERDK L L R yrkqrkk MAK LP KPVVVE T FFGYDEEAS L ESDGSSIS 502
Cdd:TIGR02168 535 Y E AA I E ----- AALGGR L QAVVVEN L NA A KKAIAF L KQNE L G R ------- VTF LP LDSIKG T EIQGNDREI L KNIEGFLG 602
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 503 YQT D RTDQT P ------------ CTPE DDL EEGMA - KEETELRF R QL T MEYQALQRAYALLQ --- EQVGGT L DAE RE V ktr 566
Cdd:TIGR02168 603 VAK D LVKFD P klrkalsyllgg VLVV DDL DNALE l AKKLRPGY R IV T LDGDLVRPGGVITG gsa KTNSSI L ERR RE I --- 679
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 567 E Q L QAE I QRAQTRVED LEKALAE --- QGQDMK wi EE KQA L YRRNQ EL VEK I KQMETEE ARL KH EV QDAKDQNEL L EFRIL 643
Cdd:TIGR02168 680 E E L EEK I EELEEKIAE LEKALAE lrk ELEELE -- EE LEQ L RKELE EL SRQ I SALRKDL ARL EA EV EQLEERIAQ L SKELT 757
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 644 ELE ERERK -------- SPAINFHHTPFVDGKSPLQVYC E AEGVTDILVT EL MKK L DI L GDN A N ----- L TNE E QVVVIQA 710
Cdd:TIGR02168 758 ELE AEIEE leerleea EEELAEAEAEIEELEAQIEQLK E ELKALREALD EL RAE L TL L NEE A A nlrer L ESL E RRIAATE 837
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 711 R TVLT L A E KWLQRI E ET ES A ------ L QRKMVD LESE K E LFSKQKGY L D E E L DYRKQA L DQAHKHIL ELE AMLYDALQ -- 782
Cdd:TIGR02168 838 R RLED L E E QIEELS E DI ES L aaeiee L EELIEE LESE L E ALLNERAS L E E A L ALLRSE L EELSEELR ELE SKRSELRR el 917
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 60360524 783 Q E AGA K V A E L ls E EER E K L K V AVEQWKRQVMS E LR --- E RDAQILRERMELLQI A QQ R I K E LE ER I E 846
Cdd:TIGR02168 918 E E LRE K L A Q L -- E LRL E G L E V RIDNLQERLSE E YS ltl E EAEALENKIEDDEEE A RR R L K R LE NK I K 982
SMC_prok_A
TIGR02169 chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
75-853
3.02e-08
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain]
Cd Length: 1164
Bit Score: 57.77
E-value: 3.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 75 KVSKVER EK S Q E L KQV R E he Q R KH A VLVTE L KTKLH E EKMK EL QAVR EAL L RQ H EA e LL R VIKIKDN E NQR L QALLNT L R 154
Cdd:TIGR02169 188 RLDLIID EK R Q Q L ERL R R -- E R EK A ERYQA L LKEKR E YEGY EL LKEK EAL E RQ K EA - IE R QLASLEE E LEK L TEEISE L E 264
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 155 DGAPDKVK tv LL C E AKEEA K KGF E V E KVKMQQE I S EL KG ---- AKKQVE E ALTMVIQ A DK i KA A EIRSVYHLHQE EI TRI 230
Cdd:TIGR02169 265 KRLEEIEQ -- LL E E LNKKI K DLG E E E QLRVKEK I G EL EA eias LERSIA E KERELED A EE - RL A KLEAEIDKLLA EI EEL 341
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 231 KK E C E R E IR R --- L M EE IRFKDRAVFV L ER EL GVQAGHAQRLQLQKEALD E Q L SQA K E a E RHP gsprrelpyasgagdas 307
Cdd:TIGR02169 342 ER E I E E E RK R rdk L T EE YAELKEELED L RA EL EEVDKEFAETRDELKDYR E K L EKL K R - E INE ----------------- 403
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 308 d HSGSPEQQLD E K da R R FQLKI A E L S A I I RKL E DRNAL L S EE RNELLKRLREA E SQYKP L LDKNKRLTRKNE DL SHTLR R 387
Cdd:TIGR02169 404 - LKRELDRLQE E L -- Q R LSEEL A D L N A A I AGI E AKINE L E EE KEDKALEIKKQ E WKLEQ L AADLSKYEQELY DL KEEYD R 480
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 388 I E SK L KFVTQ E NI E MRQR A GIIRRPSSLNDLDQSQDERE I DFLKLQIVEQQNLIDELSKTL E T A G ------- Y V KSVLER 460
Cdd:TIGR02169 481 V E KE L SKLQR E LA E AEAQ A RASEERVRGGRAVEEVLKAS I QGVHGTVAQLGSVGERYATAI E V A A gnrlnnv V V EDDAVA 560
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 461 DKLLRYR K Q RK kmaklpkp VVVE TF FGYDEEASLES D G S SI S --- YQTDRT D QTPCT P E --------------- D D L E EG 522
Cdd:TIGR02169 561 KEAIELL K R RK -------- AGRA TF LPLNKMRDERR D L S IL S edg VIGFAV D LVEFD P K yepafkyvfgdtlvv E D I E AA 632
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 523 mak EETELRF R QL T M E YQALQRAY A L lqeq V GG TLDAEREVKTREQLQ AE I QR AQT R V E D L EKA L AEQGQDMKW IE - EKQ 601
Cdd:TIGR02169 633 --- RRLMGKY R MV T L E GELFEKSG A M ---- T GG SRAPRGGILFSRSEP AE L QR LRE R L E G L KRE L SSLQSELRR IE n RLD 705
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 602 A L YRRNQELVE KI KQM E T E EAR L KH E VQDA K DQN E L LE FRILE LE ER erkspainfhhtp FVDG KS P L Q vyc E A E GVTDI 681
Cdd:TIGR02169 706 E L SQELSDASR KI GEI E K E IEQ L EQ E EEKL K ERL E E LE EDLSS LE QE ------------- IENV KS E L K --- E L E ARIEE 769
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 682 L VTE L M K KLDI L G D NANLTNEEQVVV IQA R tv L TLA E KWLQ RIE ETESALQR K MVD L ES EKE LFS K QKGY L D E ELDYR K Q 761
Cdd:TIGR02169 770 L EED L H K LEEA L N D LEARLSHSRIPE IQA E -- L SKL E EEVS RIE ARLREIEQ K LNR L TL EKE YLE K EIQE L Q E QRIDL K E 847
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 762 ALDQAH K H I LE L EAMLYDALQQEAGAKV A ELLS E EEREK LK VAVEQWKR Q v MS EL RER daqi LR E RMELLQIAQQ R IK EL 841
Cdd:TIGR02169 848 QIKSIE K E I EN L NGKKEELEEELEELEA A LRDL E SRLGD LK KERDELEA Q - LR EL ERK ---- IE E LEAQIEKKRK R LS EL 922
810
....*....|..
gi 60360524 842 EERI E TQKRQIK 853
Cdd:TIGR02169 923 KAKL E ALEEELS 934
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
45-624
1.69e-07
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 55.33
E-value: 1.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 45 AET LA A L Q A AN EELR AK L TDIQI EL QQEKSKVSKVER E KSQELKQVREH E Q R KHAVLVT elktklh E E KMK E LQ A VR E AL 124
Cdd:COG1196 259 EAE LA E L E A EL EELR LE L EELEL EL EEAQAEEYELLA E LARLEQDIARL E E R RRELEER ------- L E ELE E EL A EL E EE 331
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 125 L RQH E A EL LRVIKIKDNENQR L QALLNT L RDGAPDKVKTVLLCEAK EE AKKGFEV E KVKMQQEIS EL KGAKKQV EEA L tm 204
Cdd:COG1196 332 L EEL E E EL EELEEELEEAEEE L EEAEAE L AEAEEALLEAEAELAEA EE ELEELAE E LLEALRAAA EL AAQLEEL EEA E -- 409
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 205 vi Q A DKIKAAEIRSVYHLHQ E EITRIKK E C E R E IRR L M E EIRFKDR avfvl ER E LGVQAGHAQRLQ L QKE AL D E QLSQAK 284
Cdd:COG1196 410 -- E A LLERLERLEEELEELE E ALAELEE E E E E E EEA L E E AAEEEAE ----- LE E EEEALLELLAEL L EEA AL L E AALAEL 482
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 285 EA E RHPGSP R RE L PYASG A GDASDHS G SPEQQ L DEKDARRFQLKIAELSAIIRKLEDRN A L L SEERNELLKRLR E AESQY 364
Cdd:COG1196 483 LE E LAEAAA R LL L LLEAE A DYEGFLE G VKAAL L LAGLRGLAGAVAVLIGVEAAYEAALE A A L AAALQNIVVEDD E VAAAA 562
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 365 KPL L d K NKRLT R KNEDLSHTL R R iesklkfv TQENIEMRQ R AG I IRRPSSLNDLDQSQ D E R EIDFLKLQIVEQQNLIDEL 444
Cdd:COG1196 563 IEY L - K AAKAG R ATFLPLDKI R A -------- RAALAAALA R GA I GAAVDLVASDLREA D A R YYVLGDTLLGRTLVAARLE 633
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 445 SKTLETAGYVKSVL E RDKLLRYRKQRKKMAKLPKPVVVETFFGYDE E ASLESDGSSISYQTDRTDQTPCTP E DDLEEGMA 524
Cdd:COG1196 634 AALRRAVTLAGRLR E VTLEGEGGSAGGSLTGGSRRELLAALLEAEA E LEELAERLAEEELELEEALLAEEE E ERELAEAE 713
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 525 K E ET E LRFRQLTM E Y Q ALQRAYA LL Q E QVGGTLDA E R E VKTREQLQAEIQRAQTRV E D LE KALAEQ G Q - DMKW IEE KQA L 603
Cdd:COG1196 714 E E RL E EELEEEAL E E Q LEAEREE LL E E LLEEEELL E E E ALEELPEPPDLEELEREL E R LE REIEAL G P v NLLA IEE YEE L 793
570 580
....*....|....*....|.
gi 60360524 604 YR R NQE L V E KIKQM E TEEAR L 624
Cdd:COG1196 794 EE R YDF L S E QREDL E EARET L 814
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
524-844
2.82e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 48.01
E-value: 2.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 524 AK EE TE L RFRQ L TM E YQAL Q RAYAL L QEQVGG -------- TLDAEREVKTR E Q L QA E IQRAQTRV E D LE KA L A E QGQD mk 595
Cdd:COG1196 268 EL EE LR L ELEE L EL E LEEA Q AEEYE L LAELAR leqdiarl EERRRELEERL E E L EE E LAELEEEL E E LE EE L E E LEEE -- 345
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 596 w I EE KQALYRRNQELVEKIKQMET E EARLKH E VQDAKDQNELLEFRI L ELEERERKSPA infhhtpfvdgksplqvyc E A 675
Cdd:COG1196 346 - L EE AEEELEEAEAELAEAEEALL E AEAELA E AEEELEELAEELLEA L RAAAELAAQLE ------------------- E L 405
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 676 E GVTDI L VTE L MKKLDI L GDNANLTN E EQVVVIQARTV L TL A EKWLQRI EE T E S AL QRKMVD L ES E KE L fskqkgy L DEE 755
Cdd:COG1196 406 E EAEEA L LER L ERLEEE L EELEEALA E LEEEEEEEEEA L EE A AEEEAEL EE E E E AL LELLAE L LE E AA L ------- L EAA 478
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 756 L DYRKQA L DQ A HKHI L E L EAMLY D ALQQEA G A K V A E LL SEEEREKLK VAV EQWKRQVMSELR E -- RD A QILRERM E LLQI 833
Cdd:COG1196 479 L AELLEE L AE A AARL L L L LEAEA D YEGFLE G V K A A L LL AGLRGLAGA VAV LIGVEAAYEAAL E aa LA A ALQNIVV E DDEV 558
330
....*....|.
gi 60360524 834 A QQR I KE L EER 844
Cdd:COG1196 559 A AAA I EY L KAA 569
PTZ00121
PTZ00121 MAEBL; Provisional
33-411
3.41e-05
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 47.83
E-value: 3.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 33 KK G A GSRA K G D K A ETL A ALQAANE E LRA K LTDIQ iel QQ E KS K VSKV E RE K SQ E L K QVR E h E QR K havl VT E L K T K LH E E 112
Cdd:PTZ00121 1424 KK K A EEKK K A D E A KKK A EEAKKAD E AKK K AEEAK --- KA E EA K KKAE E AK K AD E A K KKA E - E AK K ---- AD E A K K K AE E A 1495
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 113 K m K ELQAVRE A LLRQHE A ELLR viki K DN E NQRLQALLNTLRDGAP D KV K TVLLCEAKE E A KK GF E VE K VKMQQEIS E L K 192
Cdd:PTZ00121 1496 K - K KADEAKK A AEAKKK A DEAK ---- K AE E AKKADEAKKAEEAKKA D EA K KAEEKKKAD E L KK AE E LK K AEEKKKAE E A K 1570
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 193 G A KKQVEE AL TMVIQ A D K IKA A E I RS V YH L HQ EE ITRIKK E C -- ER E IRRLM EE IRFKDRAVFVL E RELGVQ A GHAQRLQ 270
Cdd:PTZ00121 1571 K A EEDKNM AL RKAEE A K K AEE A R I EE V MK L YE EE KKMKAE E A kk AE E AKIKA EE LKKAEEEKKKV E QLKKKE A EEKKKAE 1650
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 271 LQ K E A LD E QLSQ A K E AERHPGSPRRE lpyasgagdasdhsg SP E QQLD E K D ARRFQLKIAELSAIIR K L E DRNALLS EE R 350
Cdd:PTZ00121 1651 EL K K A EE E NKIK A A E EAKKAEEDKKK --------------- AE E AKKA E E D EKKAAEALKKEAEEAK K A E ELKKKEA EE K 1715
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 60360524 351 NE l LKR L RE AE SQY K PLLDKN K RLTRKNEDLSHTLRRI E SKL K FVTQENI E MRQR A GI IR R 411
Cdd:PTZ00121 1716 KK - AEE L KK AE EEN K IKAEEA K KEAEEDKKKAEEAKKD E EEK K KIAHLKK E EEKK A EE IR K 1775
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
314-853
3.84e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 47.62
E-value: 3.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 314 E QQLD E KDARRFQLKIA EL SAIIRK LE DRNALLSE E RN ELL KR L REA E SQYKP L LDKNKR L TRKN E D L SHT L RRI E SK L K 393
Cdd:COG1196 254 E LEEL E AELAELEAELE EL RLELEE LE LELEEAQA E EY ELL AE L ARL E QDIAR L EERRRE L EERL E E L EEE L AEL E EE L E 333
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 394 FVTQ E NI E MRQRAGIIRRP ----- SS L NDLDQSQD E R E IDFLKLQIVEQQNLIDE L SKTLET A GYVKSVL E RDKLLRYRK 468
Cdd:COG1196 334 ELEE E LE E LEEELEEAEEE leeae AE L AEAEEALL E A E AELAEAEEELEELAEEL L EALRAA A ELAAQLE E LEEAEEALL 413
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 469 Q R KKMA klpkpvvvetffgyd EE ASL E SDGSSISYQTDRTDQT pctp E DDL E EGMAKE E T E LRFRQ L TMEYQA L QRAY AL 548
Cdd:COG1196 414 E R LERL --------------- EE ELE E LEEALAELEEEEEEEE ---- E ALE E AAEEEA E L E EEEEA L LELLAE L LEEA AL 474
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 549 L QEQVGGT L DAER E VKT R EQ L QA E IQR - AQTRV E DLEK AL AEQ G QDMKWIEE kq A LYRRNQELV E KIKQMETEE A RLKHE 627
Cdd:COG1196 475 L EAALAEL L EELA E AAA R LL L LL E AEA d YEGFL E GVKA AL LLA G LRGLAGAV -- A VLIGVEAAY E AALEAALAA A LQNIV 552
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 628 V Q D AKDQNELL E FRILELEE R ERKS P AINFHHTPFVDGKSPLQVYCE A EGVTDILVT E LMKKLDI LGD NA nltneeq VVV 707
Cdd:COG1196 553 V E D DEVAAAAI E YLKAAKAG R ATFL P LDKIRARAALAAALARGAIGA A VDLVASDLR E ADARYYV LGD TL ------- LGR 625
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 708 IQARTV L TL A EKWLQRIEETESALQRKMVDLESEKE L FSKQKGY L DEE L DYRKQA L DQAHKHIL E L E AM L YD AL QQ E AGA 787
Cdd:COG1196 626 TLVAAR L EA A LRRAVTLAGRLREVTLEGEGGSAGGS L TGGSRRE L LAA L LEAEAE L EELAERLA E E E LE L EE AL LA E EEE 705
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 60360524 788 KVAELLS EEER EKLKVAV E Q w KRQVMSEL RE RDAQI L R E RM ELL QIAQQRIKELEERI E TQK R QIK 853
Cdd:COG1196 706 ERELAEA EEER LEEELEE E A - LEEQLEAE RE ELLEE L L E EE ELL EEEALEELPEPPDL E ELE R ELE 770
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
47-304
8.65e-05
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 45.91
E-value: 8.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 47 TL AA LQA A NE E LR A K L TDI Q I E LQQEKSKVSKVER E KSQE LKQ VREH E Q R kha VLVTELKTKLH E EKMKE L qavr EA L L R 126
Cdd:COG4942 14 AA AA QAD A AA E AE A E L EQL Q Q E IAELEKELAALKK E EKAL LKQ LAAL E R R --- IAALARRIRAL E QELAA L ---- EA E L A 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 127 QH E A E LLRVIKIKDNENQR L QA LL NT L - R D G APDKVKTV L LC E AKEE A kkgfevek V KMQ Q EISE L KG A KKQVE E A L TMV 205
Cdd:COG4942 87 EL E K E IAELRAELEAQKEE L AE LL RA L y R L G RQPPLALL L SP E DFLD A -------- V RRL Q YLKY L AP A RREQA E E L RAD 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 206 IQADKIKA AE IRS vyhl HQE E ITRIKK E C E R E IRR L MEEIRFKDRAVFV LE R EL GVQ A GHAQR LQ LQK E A L DEQLSQAKE 285
Cdd:COG4942 159 LAELAALR AE LEA ---- ERA E LEALLA E L E E E RAA L EALKAERQKLLAR LE K EL AEL A AELAE LQ QEA E E L EALIARLEA 234
250
....*....|....*....
gi 60360524 286 AERHPGSPRRELPY A SGA G 304
Cdd:COG4942 235 EAAAAAERTPAAGF A ALK G 253
SMC_N
pfam02463 RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ...
36-853
8.65e-05
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain]
Cd Length: 1161
Bit Score: 46.50
E-value: 8.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 36 AGSR A K GD K A E T L AA L QAAN E E L RAKLT D IQIELQ QE KS kv S K VERE K SQ E LK Q VR E HEQRKHAV L VTELKT KL H EE KMK 115
Cdd:pfam02463 163 AGSR L K RK K K E A L KK L IEET E N L AELII D LEELKL QE LK -- L K EQAK K AL E YY Q LK E KLELEEEY L LYLDYL KL N EE RID 240
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 116 E LQ AVREALLRQH E AELLRVI K IKDNEN Q R L QALLNTLRDGAPDKVKTV LL CEAK EE A K KGFEVEKVKMQQEISE LK GAK 195
Cdd:pfam02463 241 L LQ ELLRDEQEEI E SSKQEIE K EEEKLA Q V L KENKEEEKEKKLQEEELK LL AKEE EE L K SELLKLERRKVDDEEK LK ESE 320
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 196 K QVEE A L tmviqa DKI K AAEIRSVYHLHQEEITR IK K E C E R E IRRLM E EIRF K DRA vf VL E RE L GVQAGHAQ RL QLQKEA 275
Cdd:pfam02463 321 K EKKK A E ------ KEL K KEKEEIEELEKELKELE IK R E A E E E EEEEL E KLQE K LEQ -- LE E EL L AKKKLESE RL SSAAKL 392
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 276 LD E Q L SQAK E A E RHPGSPRRELPYASGAGDASDHSGSPEQQLD E KDARRF Q L K IA E LSAIIR K L E DRNALLSE E R n ELLK 355
Cdd:pfam02463 393 KE E E L ELKS E E E KEAQLLLELARQLEDLLKEEKKEELEILEEE E ESIELK Q G K LT E EKEELE K Q E LKLLKDEL E L - KKSE 471
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 356 R L REAESQY K PLLDKNKR L T R KNEDLSHTLR --- R IES K LKFVTQENIEMRQRAGIIR R PSS L NDLDQSQD ------- ER 425
Cdd:pfam02463 472 D L LKETQLV K LQEQLELL L S R QKLEERSQKE ska R SGL K VLLALIKDGVGGRIISAHG R LGD L GVAVENYK vaistav IV 551
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 426 E IDFLKLQIV E Q Q N L IDE L SKTLET A GYVKSVLERD KL LRYRKQRKKMA - K L PKPVVVETFFGY DE EASLESDGSS I SYQ 504
Cdd:pfam02463 552 E VSATADEVE E R Q K L VRA L TELPLG A RKLRLLIPKL KL PLKSIAVLEID p I L NLAQLDKATLEA DE DDKRAKVVEG I LKD 631
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 505 T DR T DQTPCTPEDDLEEGMAKEET E LRFRQLTMEYQALQRAYA LL QE Q VGGTLDAEREV K TREQLQAE - I QRAQT R VEDL 583
Cdd:pfam02463 632 T EL T KLKESAKAKESGLRKGVSLE E GLAEKSEVKASLSELTKE LL EI Q ELQEKAESELA K EEILRRQL e I KKKEQ R EKEE 711
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 584 E K A L AEQGQDMKWIEEKQ A LYRR N Q EL VE - K I K QM E T EE ARL K HEVQDAKDQN E LL E FRIL E L E ER E RKSPAINFHHTPF 662
Cdd:pfam02463 712 L K K L KLEAEELLADRVQE A QDKI N E EL KL l K Q K ID E E EE EEE K SRLKKEEKEE E KS E LSLK E K E LA E EREKTEKLKVEEE 791
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 663 VDG K splqvyc EAEGVTDILVT E LMK K LDILGDNANLTNE EQ VVV I QARTVLT LA EKWLQRIEETES A LQRK mvdle SEK 742
Cdd:pfam02463 792 KEE K ------- LKAQEEELRAL E EEL K EEAELLEEEQLLI EQ EEK I KEEELEE LA LELKEEQKLEKL A EEEL ----- ERL 859
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 743 E LFSKQKGY L D E E L DYRKQALD Q AH K HI LE LEAMLYDALQQ E AGAKVAE L LSE EE R E KLKVAVEQWKRQVMSELR E RDAQ 822
Cdd:pfam02463 860 E EEITKEEL L Q E L L LKEEELEE Q KL K DE LE SKEEKEKEEKK E LEEESQK L NLL EE K E NEIEERIKEEAEILLKYE E EPEE 939
810 820 830
....*....|....*....|....*....|.
gi 60360524 823 I L R E RMELLQIAQQRIK E L EER IETQKRQIK 853
Cdd:pfam02463 940 L L L E EADEKEKEENNKE E E EER NKRLLLAKE 970
PHA03246
PHA03246 large tegument protein UL36; Provisional
430-823
3.46e-04
large tegument protein UL36; Provisional
Pssm-ID: 223020 [Multi-domain]
Cd Length: 3095
Bit Score: 44.58
E-value: 3.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 430 L K L QIV E QQNLI D E L S K T L ETAGYVK S VLER D KLL ryrkqr KK MA K lpkp V V V E TF FG ----- Y D E EA S LE SD GS sisy Q 504
Cdd:PHA03246 709 L T L VAL E VEEAT D T L H K S L DAIEREA S TADP D RIY ------ ER MA T ---- V L V D TF YR nsgkl Y S E TT S YN SD QT ---- L 774
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 505 TDR T d QTP C TPED D L E e GM A KEET EL rfrq LTM E YQ AL QRAYALLQEQV -------- GG TL --- DAEREV KT REQLQAE i 573
Cdd:PHA03246 775 TDR V - VSL C EFIR D R E - NV A TRKA EL ---- ILA E IE AL DAGVRWMNTKF dafimggs GG MS pak GLSAIA KT STDVVTQ - 847
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 574 qraqt R V E DLE KA LAEQ - G QDMKWIEE K Q ALY rrnqelve KI K QMET eearlkhevqdak D QN E LLE F R I LEL E ER E R -- 650
Cdd:PHA03246 848 ----- R L E SIG KA AIDI v G NALREYYL K C ALY -------- SA K ALRA ------------- D MK E TSR F K I VVT E QL E K mt 901
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 651 --- K S PAINFHHTPFVDGK S PLQ V YCE aeg V TDI L VTE L MK kl D I L GDNAN L TNE E QV V VIQART V LTLAEK W LQ R ---- 723
Cdd:PHA03246 902 rll S S LSVIDDVILLIASR S DAR V PVP --- V SKA L ESQ L LG -- D L L EIGSH L DVP E NL V TWKGLM V SVQTGG W IS R reld 976
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 724 -- IE E ---- TES A LQ R KMV -- D LE SEK EL F S KQKG Y L D E E LDYRK Q A LD Q A H K HILEL e AM L YDA L Q qea GAK V A EL LS E 795
Cdd:PHA03246 977 ll LK E vdav NDN A AR R ETA lt E LE RLH EL E S RIAS Y T D L E TTVDL Q K LD E A L K LANSI - VK L TKG L D --- GAK L A SS LS S 1052
410 420 430
....*....|....*....|....*....|.
gi 60360524 796 EE REK LK vave Q WKRQ --- VMSE L RE R D A QI 823
Cdd:PHA03246 1053 DI REK IR ---- Q KRSE tet LIAR L SA R Y A EV 1079
PTZ00121
PTZ00121 MAEBL; Provisional
56-651
7.24e-04
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 43.59
E-value: 7.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 56 EE L R AKLTDIQI E LQQEKSK V S K V E R - E K SQELKQVREHEQRKHAVLVT E LKTKLHEE K MKELQAVR EA ll RQHEA E LLR 134
Cdd:PTZ00121 1167 EE A R KAEDAKKA E AARKAEE V R K A E E l R K AEDARKAEAARKAEEERKAE E ARKAEDAK K AEAVKKAE EA -- KKDAE E AKK 1244
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 135 VIKIKD NE NQ R lqalln TLRDGAPDKVKTVLLCEAK EEA K K GF E VE K VKMQQEIS E L K G A -- KK QVE EA ltmviqad K I K 212
Cdd:PTZ00121 1245 AEEERN NE EI R ------ KFEEARMAHFARRQAAIKA EEA R K AD E LK K AEEKKKAD E A K K A ee KK KAD EA -------- K K K 1310
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 213 A A E IRSV yhlhq E E ITRIKK E CEREIRRLMEEIRFKDR A VFVLER E LGVQ A GH A QRLQLQK EA LDEQLSQ AK EAERHPGS 292
Cdd:PTZ00121 1311 A E E AKKA ----- D E AKKKAE E AKKKADAAKKKAEEAKK A AEAAKA E AEAA A DE A EAAEEKA EA AEKKKEE AK KKADAAKK 1385
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 293 PRR E LPY A SG A GDASDHSGSPEQQ L DEKD A RRFQLKI A ELS A IIR K LE D RNALLS EE RNELLKRLRE AE SQY K PLLD K N K 372
Cdd:PTZ00121 1386 KAE E KKK A DE A KKKAEEDKKKADE L KKAA A AKKKADE A KKK A EEK K KA D EAKKKA EE AKKADEAKKK AE EAK K AEEA K K K 1465
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 373 RLTR K NE D LSHTLRRIES K LKFVTQENI E MRQR A GIIRRPSS ---- LNDLDQSQDEREI D fl KLQIV E QQNLI DE LS K TL 448
Cdd:PTZ00121 1466 AEEA K KA D EAKKKAEEAK K ADEAKKKAE E AKKK A DEAKKAAE akkk ADEAKKAEEAKKA D -- EAKKA E EAKKA DE AK K AE 1543
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 449 E tagy V K SVL E RD K LLRYR K QRK K MA klpkpvv V E TFFGYD E EASLESDGSSISYQTDRTDQTPCTPEDDL E EG M AK EE T 528
Cdd:PTZ00121 1544 E ---- K K KAD E LK K AEELK K AEE K KK ------- A E EAKKAE E DKNMALRKAEEAKKAEEARIEEVMKLYEE E KK M KA EE A 1612
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 529 E l RFRQLTMEYQA L QR A YALLQEQVGGTLDAER E V K TR E Q L QAEIQRAQTRVEDLE K ALA E --- QGQDM K WI EE ---- KQ 601
Cdd:PTZ00121 1613 K - KAEEAKIKAEE L KK A EEEKKKVEQLKKKEAE E K K KA E E L KKAEEENKIKAAEEA K KAE E dkk KAEEA K KA EE dekk AA 1691
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 60360524 602 ALYRRNQ E LVE K IKQMETE EA RL K HEVQDA K DQN E LLEFRIL E LEERERK 651
Cdd:PTZ00121 1692 EALKKEA E EAK K AEELKKK EA EE K KKAEEL K KAE E ENKIKAE E AKKEAEE 1741
PTZ00121
PTZ00121 MAEBL; Provisional
33-295
2.01e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.05
E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 33 K K G A GSRA K GDK A ETLAALQA A N E ELR A KLTDIQI EL Q -- Q EK S K VSKVERE --------- K SQ E L K QVR E HEQRKHAV L 101
Cdd:PTZ00121 1521 A K K A DEAK K AEE A KKADEAKK A E E KKK A DELKKAE EL K ka E EK K K AEEAKKA eedknmalr K AE E A K KAE E ARIEEVMK L 1600
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 102 VT E L K TKLH EE KM K ELQ A VRE A - L L RQH E A E LLR V IKI K DN E NQRLQALLNTLRDGAPD K V K TVLLCEAK EE A KK GF E VE 180
Cdd:PTZ00121 1601 YE E E K KMKA EE AK K AEE A KIK A e E L KKA E E E KKK V EQL K KK E AEEKKKAEELKKAEEEN K I K AAEEAKKA EE D KK KA E EA 1680
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 181 K VKMQQ E ISELKGA KK QV EEA ----- L TMVIQAD K I KA A E IRSVYHLHQEEITRI KKE C E RE i RRLM EE IRFKDRAVFVL 255
Cdd:PTZ00121 1681 K KAEED E KKAAEAL KK EA EEA kkaee L KKKEAEE K K KA E E LKKAEEENKIKAEEA KKE A E ED - KKKA EE AKKDEEEKKKI 1759
250 260 270 280
....*....|....*....|....*....|....*....|
gi 60360524 256 ERELGVQAGH A QRLQLQ KEA LD E QLSQAKEAE R HPGSPRR 295
Cdd:PTZ00121 1760 AHLKKEEEKK A EEIRKE KEA VI E EELDEEDEK R RMEVDKK 1799
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
156-473
3.86e-03
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 41.20
E-value: 3.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 156 G APD K VKTVL L CEAK E EAKKGFEV E KVKMQQEIS -- E L KGAK K QV EE ALTMVI Q AD K IKAAEI R SV y HLHQEEIT R IKK E 233
Cdd:TIGR02168 663 G GSA K TNSSI L ERRR E IEELEEKI E ELEEKIAEL ek A L AELR K EL EE LEEELE Q LR K ELEELS R QI - SALRKDLA R LEA E 741
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 234 C E R --- E I RR L ME E IRFKDRAVFV LE RE L GVQAGHAQRLQLQK E A L DE Q LS Q A KE AERHPGSPRR EL PYASGAGDASDHS 310
Cdd:TIGR02168 742 V E Q lee R I AQ L SK E LTELEAEIEE LE ER L EEAEEELAEAEAEI E E L EA Q IE Q L KE ELKALREALD EL RAELTLLNEEAAN 821
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 311 GSPEQQLD E KDARRFQLKIAE L SAI I RK L EDRNAL L SE E RN EL LKRLR E A ES QYKP LL DK ------- NKR L TRKN E D LS H 383
Cdd:TIGR02168 822 LRERLESL E RRIAATERRLED L EEQ I EE L SEDIES L AA E IE EL EELIE E L ES ELEA LL NE rasleea LAL L RSEL E E LS E 901
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 384 T LR RI ESK LKFVTQ E NI E M R QRAGIIR rpsslnd L DQSQD E RE ID F L KLQIV E QQN L ID E LSKT LE TAGYVKSVLE R DK L 463
Cdd:TIGR02168 902 E LR EL ESK RSELRR E LE E L R EKLAQLE ------- L RLEGL E VR ID N L QERLS E EYS L TL E EAEA LE NKIEDDEEEA R RR L 974
330
....*....|
gi 60360524 464 L R YRKQR K KM 473
Cdd:TIGR02168 975 K R LENKI K EL 984
DR0291
COG1579 Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ...
564-648
7.11e-03
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain]
Cd Length: 236
Bit Score: 39.14
E-value: 7.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 564 KTREQ L Q A EIQR A Q T RV EDLEK ALAEQGQDMKWI E EKQAL Y RRNQEL V EKI K QM E T eear L KH E VQDA K DQNEL LE FR IL 643
Cdd:COG1579 38 DELAA L E A RLEA A K T EL EDLEK EIKRLELEIEEV E ARIKK Y EEQLGN V RNN K EY E A ---- L QK E IESL K RRISD LE DE IL 113
....*
gi 60360524 644 EL E ER 648
Cdd:COG1579 114 EL M ER 118
YhaN
COG4717 Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
518-852
8.82e-03
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain]
Cd Length: 641
Bit Score: 39.75
E-value: 8.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 518 D L E E GMA K E E TE L RFRQ L TM E YQ AL QRAY A L L Q E QVG gtl DA E REVKTREQ L QA E IQRAQTRVED L EKA L A E QGQDMKWI 597
Cdd:COG4717 113 E L R E ELE K L E KL L QLLP L YQ E LE AL EAEL A E L P E RLE --- EL E ERLEELRE L EE E LEELEAELAE L QEE L E E LLEQLSLA 189
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 598 E E KQA -- L YRRNQ EL VEKIKQM E T E EARLKH E VQDAKDQN E L LE FRILELEER ER KS ------ PAINFHHTPFVD G K S P L 669
Cdd:COG4717 190 T E EEL qd L AEELE EL QQRLAEL E E E LEEAQE E LEELEEEL E Q LE NELEAAALE ER LK earlll LIAAALLALLGL G G S L L 269
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 670 QVYCEAE GV TDILVTE L MKKLDI L GDNANLTNE E QVVVIQARTVLT L A E KW L QRI eetesa L QRKMVDLESEK E LFSKQK 749
Cdd:COG4717 270 SLILTIA GV LFLVLGL L ALLFLL L AREKASLGK E AEELQALPALEE L E E EE L EEL ------ L AALGLPPDLSP E ELLELL 343
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 60360524 750 GYLD E ELDYRKQ A LDQAHKHI LE LEAMLYD AL QQ EAG AKVA E L L SE ----- EE REK LK VAV E QWKR Q VMSE L R E RDAQI - 823
Cdd:COG4717 344 DRIE E LQELLRE A EELEEELQ LE ELEQEIA AL LA EAG VEDE E E L RA aleqa EE YQE LK EEL E ELEE Q LEEL L G E LEELL e 423
330 340 350
....*....|....*....|....*....|..
gi 60360524 824 --- LR E RM E L L QIAQQRIK ELEE RI E TQKRQI 852
Cdd:COG4717 424 ald EE E LE E E L EELEEELE ELEE EL E ELREEL 455
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
