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Conserved domains on  [gi|26351229|dbj|BAC39251|]
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unnamed protein product [Mus musculus]

Protein Classification

SAPS family protein( domain architecture ID 141778)

SAPS (sit4-associated proteins) family protein such as the Saccharomyces cerevisiae sit4-associated protein which is required for SIT4's role in G1 cyclin transcription and for bud formation

PubMed:  8649382

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SAPS super family cl20267
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
 128-207 4.88e-30

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


The actual alignment was detected with superfamily member pfam04499:

Pssm-ID: 398279  Cd Length: 383  Bit Score: 115.42  E-value: 4.88e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 26351229   128 IGNLIARKTEQVIMFLKKKEKFISQLLKHIGTSALMDLLLRLVSCVEPVGlRQEVLHWLNEEKIIQRIVALIHPHQDEDV 207
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKPEL-PTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79
 
Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
 128-207 4.88e-30

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


Pssm-ID: 398279  Cd Length: 383  Bit Score: 115.42  E-value: 4.88e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 26351229   128 IGNLIARKTEQVIMFLKKKEKFISQLLKHIGTSALMDLLLRLVSCVEPVGlRQEVLHWLNEEKIIQRIVALIHPHQDEDV 207
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKPEL-PTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79
 
Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
 128-207 4.88e-30

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


Pssm-ID: 398279  Cd Length: 383  Bit Score: 115.42  E-value: 4.88e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 26351229   128 IGNLIARKTEQVIMFLKKKEKFISQLLKHIGTSALMDLLLRLVSCVEPVGlRQEVLHWLNEEKIIQRIVALIHPHQDEDV 207
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKPEL-PTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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