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Conserved domains on  [gi|26338560|dbj|BAC32951|]
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unnamed protein product [Mus musculus]

Protein Classification

CYK3 family protein( domain architecture ID 11474529)

CYK3 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYK3 COG5279
Cytokinesis protein 3, contains TGc (transglutaminase/protease-like) domain [Cell cycle ...
 146-341 3.37e-52

Cytokinesis protein 3, contains TGc (transglutaminase/protease-like) domain [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 444090 [Multi-domain]  Cd Length: 250  Bit Score: 180.60  E-value: 3.37e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 26338560 146 PLDLRLFEKLDASASQVTVKSGLNELVSDLLQEAHSDLERVRAIWIWICHHIEYDVEAAQEKDRQAFKPTDILRTQKTNC 225
Cdd:COG5279  65 SSTIYALKDEEGLLTEKATIADESKDDDYIITPGMSDYEKVRAIHDWIVDNIEYDYEAYNSGKSDSHSAYGALKNGKGVC 144

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 26338560 226 DGYAGLFERMCRVAGVQCVTVPGYSKGFGYQTGqsfsgefDHAWNAVYLEGRWHLVDSTWGSGLVDTTTSKftflYNEFY 305
Cdd:COG5279 145 EGYAKLFKLLCNKAGIECYIVTGYARGSGGESG-------NHAWNAVKIDGKWYLVDATWDDGVPDNGGGD----VNYDY 213

                       170       180       190
                ....*....|....*....|....*....|....*.
gi 26338560 306 FLTHPALFIEDHFPDNKNWQLLKPPQSLRQFENSMY 341
Cdd:COG5279 214 FLLSDEEFAKDHLPEDPKWQLLDYPISKDEFANLYY 249
 
Name Accession Description Interval E-value
CYK3 COG5279
Cytokinesis protein 3, contains TGc (transglutaminase/protease-like) domain [Cell cycle ...
 146-341 3.37e-52

Cytokinesis protein 3, contains TGc (transglutaminase/protease-like) domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444090 [Multi-domain]  Cd Length: 250  Bit Score: 180.60  E-value: 3.37e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 26338560 146 PLDLRLFEKLDASASQVTVKSGLNELVSDLLQEAHSDLERVRAIWIWICHHIEYDVEAAQEKDRQAFKPTDILRTQKTNC 225
Cdd:COG5279  65 SSTIYALKDEEGLLTEKATIADESKDDDYIITPGMSDYEKVRAIHDWIVDNIEYDYEAYNSGKSDSHSAYGALKNGKGVC 144

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 26338560 226 DGYAGLFERMCRVAGVQCVTVPGYSKGFGYQTGqsfsgefDHAWNAVYLEGRWHLVDSTWGSGLVDTTTSKftflYNEFY 305
Cdd:COG5279 145 EGYAKLFKLLCNKAGIECYIVTGYARGSGGESG-------NHAWNAVKIDGKWYLVDATWDDGVPDNGGGD----VNYDY 213

                       170       180       190
                ....*....|....*....|....*....|....*.
gi 26338560 306 FLTHPALFIEDHFPDNKNWQLLKPPQSLRQFENSMY 341
Cdd:COG5279 214 FLLSDEEFAKDHLPEDPKWQLLDYPISKDEFANLYY 249
TGc smart00460
Transglutaminase/protease-like homologues; Transglutaminases are enzymes that establish ...
 217-285 5.29e-16

Transglutaminase/protease-like homologues; Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.


Pssm-ID: 214673  Cd Length: 68  Bit Score: 72.80  E-value: 5.29e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 26338560    217 ILRTQKTNCDGYAGLFERMCRVAGVQCVTVPGYSKGFGYQTGQSFSGEFdHAWNAVYLEGRWHLVDSTW 285
Cdd:smart00460   1 LLKTKYGTCGEFAALFVALLRSLGIPARVVSGYLKAPDTIGGLRSIWEA-HAWAEVYLEGGWVPVDPTP 68
Transglut_core pfam01841
Transglutaminase-like superfamily; This family includes animal transglutaminases and other ...
 170-282 1.97e-15

Transglutaminase-like superfamily; This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.


Pssm-ID: 376628 [Multi-domain]  Cd Length: 108  Bit Score: 72.44  E-value: 1.97e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 26338560   170 ELVSDLLQEAHSDLERVRAIWIWICHHIEYDVEAAQEKDRQAfkpTDILRTQKTNCDGYAGLFERMCRVAGVQCVTVpgy 249
Cdd:pfam01841   2 ALADRITGGATDPLEKARAIYDYVRKNITYDLPGRSPGDGDA---EEFLFTGKGDCEDFASLFVALLRALGIPARYV--- 75

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 26338560   250 skgFGYQTGQSFSGEFD-HAWNAVYLEG-RWHLVD 282
Cdd:pfam01841  76 ---TGYLRGPDTVRGGDaHAWVEVYLPGyGWVPVD 107
 
Name Accession Description Interval E-value
CYK3 COG5279
Cytokinesis protein 3, contains TGc (transglutaminase/protease-like) domain [Cell cycle ...
 146-341 3.37e-52

Cytokinesis protein 3, contains TGc (transglutaminase/protease-like) domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444090 [Multi-domain]  Cd Length: 250  Bit Score: 180.60  E-value: 3.37e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 26338560 146 PLDLRLFEKLDASASQVTVKSGLNELVSDLLQEAHSDLERVRAIWIWICHHIEYDVEAAQEKDRQAFKPTDILRTQKTNC 225
Cdd:COG5279  65 SSTIYALKDEEGLLTEKATIADESKDDDYIITPGMSDYEKVRAIHDWIVDNIEYDYEAYNSGKSDSHSAYGALKNGKGVC 144

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 26338560 226 DGYAGLFERMCRVAGVQCVTVPGYSKGFGYQTGqsfsgefDHAWNAVYLEGRWHLVDSTWGSGLVDTTTSKftflYNEFY 305
Cdd:COG5279 145 EGYAKLFKLLCNKAGIECYIVTGYARGSGGESG-------NHAWNAVKIDGKWYLVDATWDDGVPDNGGGD----VNYDY 213

                       170       180       190
                ....*....|....*....|....*....|....*.
gi 26338560 306 FLTHPALFIEDHFPDNKNWQLLKPPQSLRQFENSMY 341
Cdd:COG5279 214 FLLSDEEFAKDHLPEDPKWQLLDYPISKDEFANLYY 249
TGc smart00460
Transglutaminase/protease-like homologues; Transglutaminases are enzymes that establish ...
 217-285 5.29e-16

Transglutaminase/protease-like homologues; Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.


Pssm-ID: 214673  Cd Length: 68  Bit Score: 72.80  E-value: 5.29e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 26338560    217 ILRTQKTNCDGYAGLFERMCRVAGVQCVTVPGYSKGFGYQTGQSFSGEFdHAWNAVYLEGRWHLVDSTW 285
Cdd:smart00460   1 LLKTKYGTCGEFAALFVALLRSLGIPARVVSGYLKAPDTIGGLRSIWEA-HAWAEVYLEGGWVPVDPTP 68
Transglut_core pfam01841
Transglutaminase-like superfamily; This family includes animal transglutaminases and other ...
 170-282 1.97e-15

Transglutaminase-like superfamily; This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.


Pssm-ID: 376628 [Multi-domain]  Cd Length: 108  Bit Score: 72.44  E-value: 1.97e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 26338560   170 ELVSDLLQEAHSDLERVRAIWIWICHHIEYDVEAAQEKDRQAfkpTDILRTQKTNCDGYAGLFERMCRVAGVQCVTVpgy 249
Cdd:pfam01841   2 ALADRITGGATDPLEKARAIYDYVRKNITYDLPGRSPGDGDA---EEFLFTGKGDCEDFASLFVALLRALGIPARYV--- 75

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 26338560   250 skgFGYQTGQSFSGEFD-HAWNAVYLEG-RWHLVD 282
Cdd:pfam01841  76 ---TGYLRGPDTVRGGDaHAWVEVYLPGyGWVPVD 107
YebA COG1305
Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, ...
 168-284 4.72e-15

Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440916 [Multi-domain]  Cd Length: 174  Bit Score: 73.50  E-value: 4.72e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 26338560 168 LNELVSDLLQEAHSDLERVRAIWIWICHHIEYDVEAAQEKDRqafkPTDILRTQKTNCDGYAGLFERMCRVAGVQCvtvp 247
Cdd:COG1305  63 LRALAAELTGGATTPYEKARALYDWVRDNIRYDPGSTGVGTT----ALETLERRRGVCRDFAHLLVALLRALGIPA---- 134

                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 26338560 248 GYSKGFGYQTGQSFSGEFD--HAWNAVYLEGR-WHLVDST 284
Cdd:COG1305 135 RYVSGYLPGEPPPGGGRADdaHAWVEVYLPGAgWVPFDPT 174
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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