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Conserved domains on  [gi|26335968|dbj|BAC31682|]
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unnamed protein product [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PMAIP1 super family cl21017
Phorbol-12-myristate-13-acetate-induced; This family carries a BH3 domain between residues 23 ...
 50-103 9.99e-23

Phorbol-12-myristate-13-acetate-induced; This family carries a BH3 domain between residues 23 and 40.


The actual alignment was detected with superfamily member pfam15150:

Pssm-ID: 464534  Cd Length: 54  Bit Score: 83.00  E-value: 9.99e-23
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 26335968    50 MPGKSQKsRMRSPSPTRVPADLKDECA-QLRRIGDKVNLRQKLLNLISKLFNLVT 103
Cdd:pfam15150   1 MPGKKAR-KNAQPSPTRAPAELEVECAiQLRRIGDKLNFRQKLLNLISKLFRSGT 54
 
Name Accession Description Interval E-value
PMAIP1 pfam15150
Phorbol-12-myristate-13-acetate-induced; This family carries a BH3 domain between residues 23 ...
 50-103 9.99e-23

Phorbol-12-myristate-13-acetate-induced; This family carries a BH3 domain between residues 23 and 40.


Pssm-ID: 464534  Cd Length: 54  Bit Score: 83.00  E-value: 9.99e-23
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 26335968    50 MPGKSQKsRMRSPSPTRVPADLKDECA-QLRRIGDKVNLRQKLLNLISKLFNLVT 103
Cdd:pfam15150   1 MPGKKAR-KNAQPSPTRAPAELEVECAiQLRRIGDKLNFRQKLLNLISKLFRSGT 54
 
Name Accession Description Interval E-value
PMAIP1 pfam15150
Phorbol-12-myristate-13-acetate-induced; This family carries a BH3 domain between residues 23 ...
 50-103 9.99e-23

Phorbol-12-myristate-13-acetate-induced; This family carries a BH3 domain between residues 23 and 40.


Pssm-ID: 464534  Cd Length: 54  Bit Score: 83.00  E-value: 9.99e-23
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 26335968    50 MPGKSQKsRMRSPSPTRVPADLKDECA-QLRRIGDKVNLRQKLLNLISKLFNLVT 103
Cdd:pfam15150   1 MPGKKAR-KNAQPSPTRAPAELEVECAiQLRRIGDKLNFRQKLLNLISKLFRSGT 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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