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Conserved domains on  [gi|10177742|dbj|BAB11055|]
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unnamed protein product [Arabidopsis thaliana]

Protein Classification

N-acetyltransferase( domain architecture ID 10654334)

N-acetyltransferase catalyzes the transfer of the acetyl group from acetyl coenzyme A donor to a substrate; contains Tudor-like Agenet domains, Jas domain(s) which in plant transcriptional repressors bind Groucho/Tup1-type co-repressor TOPLESS (TPL) and TPL-related proteins (TPRs), and plant homeodomain (PHD) finger(s) which bind zinc and may be involved in protein-protein interaction

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Agenet smart00743
Tudor-like domain present in plant sequences; Domain in plant sequences with possible ...
 55-115 6.90e-11

Tudor-like domain present in plant sequences; Domain in plant sequences with possible chromatin-associated functions.


:

Pssm-ID: 214798  Cd Length: 59  Bit Score: 55.79  E-value: 6.90e-11
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 10177742     55 DSWKVGDLVDWLRDDIYWSGEIVEMRGRRACQIELlpKPEGEGDSYQGLCKNLRPRLDWSV 115
Cdd:smart00743   1 SDFKEGDRVEVFSEDSWWEAVVTKVLGDGKYLVEY--KGESEPLELTVDWSDLRPHPPWVD 59
 
Name Accession Description Interval E-value
Agenet smart00743
Tudor-like domain present in plant sequences; Domain in plant sequences with possible ...
 55-115 6.90e-11

Tudor-like domain present in plant sequences; Domain in plant sequences with possible chromatin-associated functions.


Pssm-ID: 214798  Cd Length: 59  Bit Score: 55.79  E-value: 6.90e-11
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 10177742     55 DSWKVGDLVDWLRDDIYWSGEIVEMRGRRACQIELlpKPEGEGDSYQGLCKNLRPRLDWSV 115
Cdd:smart00743   1 SDFKEGDRVEVFSEDSWWEAVVTKVLGDGKYLVEY--KGESEPLELTVDWSDLRPHPPWVD 59
 
Name Accession Description Interval E-value
Agenet smart00743
Tudor-like domain present in plant sequences; Domain in plant sequences with possible ...
 55-115 6.90e-11

Tudor-like domain present in plant sequences; Domain in plant sequences with possible chromatin-associated functions.


Pssm-ID: 214798  Cd Length: 59  Bit Score: 55.79  E-value: 6.90e-11
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 10177742     55 DSWKVGDLVDWLRDDIYWSGEIVEMRGRRACQIELlpKPEGEGDSYQGLCKNLRPRLDWSV 115
Cdd:smart00743   1 SDFKEGDRVEVFSEDSWWEAVVTKVLGDGKYLVEY--KGESEPLELTVDWSDLRPHPPWVD 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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