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Conserved domains on  [gi|2208908|dbj|BAA20522|]
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phosphate transporter [Catharanthus roseus]

Protein Classification

MFS transporter( domain architecture ID 11489914)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
11-511 0e+00

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


:

Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 774.67  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     11 ALDVAKTQ---WYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGavkpgTLPPNVSAAVNGVAFCGTLAGQLF 87
Cdd:TIGR00887   1 ALEEADTApfgWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKG-----PLPSSVSAAVNGSASIGTLAGQLF 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     88 FGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGDKPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAA 167
Cdd:TIGR00887  76 FGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAA 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    168 VFAMQGFGILAGGMVAIIVSASFKAGFPAPAYQDGAVASTVPEADYVWRIILMFGAIPAALTYYWRMKMPETARYTALVA 247
Cdd:TIGR00887 156 VFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVA 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    248 KNAKQAANDMSKVLQVELEAEQEKVEKFAQEP----ANTFGLFTKEFLKRHGLHLLGTATTWFLLDIAFYSQNLFQKDIF 323
Cdd:TIGR00887 236 KDVEQAASDMSAVLQVKIEAEPDEVEKASTAVevpkASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVIL 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    324 SAIGWIPPAQTMNAIEEVFRIARAQTLIALCSTVPGYWFTVFLIDRIGRFIIQWMGFFFMTVFMFALAIPYNHWTHKdnr 403
Cdd:TIGR00887 316 SAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTH--- 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    404 iGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQPSDPsktDKGYPPGIGVK 483
Cdd:TIGR00887 393 -GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDP---TKGYPTGIWMG 468
                         490       500
                  ....*....|....*....|....*...
gi 2208908    484 NALIVLGCVNFLGMVFTFLVPEAKGKSL 511
Cdd:TIGR00887 469 HVLEIFALFMFLGILFTLLIPETKGKSL 496
 
Name Accession Description Interval E-value
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
11-511 0e+00

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 774.67  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     11 ALDVAKTQ---WYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGavkpgTLPPNVSAAVNGVAFCGTLAGQLF 87
Cdd:TIGR00887   1 ALEEADTApfgWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKG-----PLPSSVSAAVNGSASIGTLAGQLF 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     88 FGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGDKPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAA 167
Cdd:TIGR00887  76 FGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAA 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    168 VFAMQGFGILAGGMVAIIVSASFKAGFPAPAYQDGAVASTVPEADYVWRIILMFGAIPAALTYYWRMKMPETARYTALVA 247
Cdd:TIGR00887 156 VFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVA 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    248 KNAKQAANDMSKVLQVELEAEQEKVEKFAQEP----ANTFGLFTKEFLKRHGLHLLGTATTWFLLDIAFYSQNLFQKDIF 323
Cdd:TIGR00887 236 KDVEQAASDMSAVLQVKIEAEPDEVEKASTAVevpkASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVIL 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    324 SAIGWIPPAQTMNAIEEVFRIARAQTLIALCSTVPGYWFTVFLIDRIGRFIIQWMGFFFMTVFMFALAIPYNHWTHKdnr 403
Cdd:TIGR00887 316 SAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTH--- 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    404 iGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQPSDPsktDKGYPPGIGVK 483
Cdd:TIGR00887 393 -GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDP---TKGYPTGIWMG 468
                         490       500
                  ....*....|....*....|....*...
gi 2208908    484 NALIVLGCVNFLGMVFTFLVPEAKGKSL 511
Cdd:TIGR00887 469 HVLEIFALFMFLGILFTLLIPETKGKSL 496
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
25-507 1.76e-180

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 512.98  E-value: 1.76e-180
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYHvdgavKPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMT 104
Cdd:cd17364   1 IIIAGMGFFTDAYDLFSISLVTKILGRLYYG-----GKGSLPSGVSGLVNAAALVGTIIGQLFFGFLGDRFGRKRVYGVE 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  105 LMLMVIASIASGLSFGDKPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAI 184
Cdd:cd17364  76 LIIMIIGTILSALSPGSTPLGVMGWLIFFRFLLGIGIGGDYPLSATIMSEYANKKRRGALIAAVFAMQGFGILAGAIVTL 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  185 IVSASFKAGFPapayqdgavASTVPEADYVWRIILMFGAIPAALTYYWRMkmpetarytalvaknakqaandmskvlqve 264
Cdd:cd17364 156 ILSAIFEHPLP---------AGTYHHADLVWRIVLGLGAIPALSVLYFRK------------------------------ 196
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  265 leaeqekvekfaqepantfglftkeflkrhglHLLGTATTWFLLDIAFYSQNLFQKDIFSAIGWIppaQTMNAIEEVFRI 344
Cdd:cd17364 197 --------------------------------HLLGTAGTWFLLDIAFYGQNLFQSTIISAIGFS---KTMNAYQELFNI 241
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  345 ARAQTLIALCSTVPGYWFTVFLIDRIGRFIIQWMGFFFMTVFMFALAIPYNHWTHkdNRIGFVIMYSLTFFFANFGPNAT 424
Cdd:cd17364 242 AVGQLIIALAGTVPGYWFTVFLIDRIGRKKIQMMGFFGMTIFLLILAGPYDHWKI--STIGFFVLYGLTFFFSNFGPNTT 319
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  425 TFVVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQpsdpsktdkgyppGIGVKNALIVLGCVNFLGMVFTFLVP 504
Cdd:cd17364 320 TFIVPAEVFPARVRSTCHGISAASGKIGAIVGSFLFLSLTQ-------------NIGVRNVLIILAGVALLGIILTLLFP 386

                ...
gi 2208908  505 EAK 507
Cdd:cd17364 387 EEK 389
Sugar_tr pfam00083
Sugar (and other) transporter;
26-511 6.66e-30

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 122.38  E-value: 6.66e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     26 VIAGMGFFTDAYDLFCISLVTKLLGRIY-YHVDGAVKPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMT 104
Cdd:pfam00083   3 LVAALGGFLFGYDTGVIGAFLTLIDFFKnFGLSKSVSSLAALSVLSGLIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    105 LMLMVIASIASGLSFGDKPKAVmatLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIaavfAMQGFGILAGGMVAI 184
Cdd:pfam00083  83 NVLFVIGAVLQGAAKGKWSVYQ---LIVGRVLVGIGVGGASVLAPMYISEIAPKKLRGALG----SLYQLAITFGILLAY 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    185 IVSASFKAGFpapayqdgavastvpeADYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAK--NAKQAANDMSKVLQ 262
Cdd:pfam00083 156 IFGLGLNKTS----------------NSDGWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRleEAREVLAKLRGVPD 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    263 VELEAEQEKVE-KFAQEPANTfglFTKEFLKRHGlhLLGTATTWFLLDIA----------FYSQNLFQKDIFSaigwipP 331
Cdd:pfam00083 220 VDRELDEIKDSlEAGQEAEKA---SWKELFSTKT--RRQRLLIGVMLQIFqqltginaifYYSTTIFENLGLS------D 288
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    332 AQTMNAIeeVFRIARAQTLIALcstvpgywftvFLIDRIGRFIIQWMGFFFMTVFMFALAIPYNHWTHKDNRIGFVIMYS 411
Cdd:pfam00083 289 SFLVTII--VGVVNFVFTFIAI-----------FLVDRFGRRPLLLLGAAGMAICFVILGIVALLGVSKSDWAGIVAIVF 355
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    412 LTFFFA--NFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQpsdpsktdkgyppGIGVKNALIVL 489
Cdd:pfam00083 356 IALFIAffAMGWGPVPWVIVSELFPLSVRSKAMALATAANWLANFLIGFLFPIITD-------------AIGLGYTFFIF 422
                         490       500
                  ....*....|....*....|...
gi 2208908    490 GCVNFLGMVFTFL-VPEAKGKSL 511
Cdd:pfam00083 423 AGLLVLFIIFVFFfVPETKGRTL 445
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
21-247 1.09e-22

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 98.34  E-value: 1.09e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   21 HFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYyhvdgavkpgTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRV 100
Cdd:COG0477  12 RRRALLALALGTFLEGLDFTIVNVALPSIAADL----------GASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRV 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  101 YGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180
Cdd:COG0477  82 LLIGLLLFGLASLLCGLAPS------PELLIAARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGP 155
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2208908  181 MVAIIVSASFkagfpapayqdgavastvpeadyVWRIILMFGAIPAALTYYWRMKMPETARYTALVA 247
Cdd:COG0477 156 LLGGLLVAAL-----------------------GWRWIFLINAPLGLLALVLRLRLPESRGLLLALL 199
PRK03893 PRK03893
putative sialic acid transporter; Provisional
16-261 9.87e-11

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 63.95  E-value: 9.87e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    16 KTQWYHFTAiviAGMGFFTDAYDLFCISLVTKLLGRIYyhvdgavkpgTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKM 95
Cdd:PRK03893  16 RAQWKAFSA---AWLGYLLDGFDFVLITLVLTEVQGEF----------GLTTVQAASLISAAFISRWFGGLLLGAMGDRY 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    96 GRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAfiAAVFAMQGFG 175
Cdd:PRK03893  83 GRRLAMVISIVLFSVGTLACGFAPG------YWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNK--ASGFLISGFS 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   176 IlaGGMVAiivsasfkagfpAPAYqdgavASTVPEadYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAKNAkqAAN 255
Cdd:PRK03893 155 I--GAVVA------------AQVY-----SLVVPV--WGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKA--PVR 211

                 ....*.
gi 2208908   256 DMSKVL 261
Cdd:PRK03893 212 TMVDIL 217
 
Name Accession Description Interval E-value
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
11-511 0e+00

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 774.67  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     11 ALDVAKTQ---WYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGavkpgTLPPNVSAAVNGVAFCGTLAGQLF 87
Cdd:TIGR00887   1 ALEEADTApfgWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKG-----PLPSSVSAAVNGSASIGTLAGQLF 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     88 FGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGDKPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAA 167
Cdd:TIGR00887  76 FGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAA 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    168 VFAMQGFGILAGGMVAIIVSASFKAGFPAPAYQDGAVASTVPEADYVWRIILMFGAIPAALTYYWRMKMPETARYTALVA 247
Cdd:TIGR00887 156 VFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVA 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    248 KNAKQAANDMSKVLQVELEAEQEKVEKFAQEP----ANTFGLFTKEFLKRHGLHLLGTATTWFLLDIAFYSQNLFQKDIF 323
Cdd:TIGR00887 236 KDVEQAASDMSAVLQVKIEAEPDEVEKASTAVevpkASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVIL 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    324 SAIGWIPPAQTMNAIEEVFRIARAQTLIALCSTVPGYWFTVFLIDRIGRFIIQWMGFFFMTVFMFALAIPYNHWTHKdnr 403
Cdd:TIGR00887 316 SAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTH--- 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    404 iGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQPSDPsktDKGYPPGIGVK 483
Cdd:TIGR00887 393 -GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDP---TKGYPTGIWMG 468
                         490       500
                  ....*....|....*....|....*...
gi 2208908    484 NALIVLGCVNFLGMVFTFLVPEAKGKSL 511
Cdd:TIGR00887 469 HVLEIFALFMFLGILFTLLIPETKGKSL 496
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
25-507 1.76e-180

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 512.98  E-value: 1.76e-180
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYHvdgavKPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMT 104
Cdd:cd17364   1 IIIAGMGFFTDAYDLFSISLVTKILGRLYYG-----GKGSLPSGVSGLVNAAALVGTIIGQLFFGFLGDRFGRKRVYGVE 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  105 LMLMVIASIASGLSFGDKPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAI 184
Cdd:cd17364  76 LIIMIIGTILSALSPGSTPLGVMGWLIFFRFLLGIGIGGDYPLSATIMSEYANKKRRGALIAAVFAMQGFGILAGAIVTL 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  185 IVSASFKAGFPapayqdgavASTVPEADYVWRIILMFGAIPAALTYYWRMkmpetarytalvaknakqaandmskvlqve 264
Cdd:cd17364 156 ILSAIFEHPLP---------AGTYHHADLVWRIVLGLGAIPALSVLYFRK------------------------------ 196
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  265 leaeqekvekfaqepantfglftkeflkrhglHLLGTATTWFLLDIAFYSQNLFQKDIFSAIGWIppaQTMNAIEEVFRI 344
Cdd:cd17364 197 --------------------------------HLLGTAGTWFLLDIAFYGQNLFQSTIISAIGFS---KTMNAYQELFNI 241
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  345 ARAQTLIALCSTVPGYWFTVFLIDRIGRFIIQWMGFFFMTVFMFALAIPYNHWTHkdNRIGFVIMYSLTFFFANFGPNAT 424
Cdd:cd17364 242 AVGQLIIALAGTVPGYWFTVFLIDRIGRKKIQMMGFFGMTIFLLILAGPYDHWKI--STIGFFVLYGLTFFFSNFGPNTT 319
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  425 TFVVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQpsdpsktdkgyppGIGVKNALIVLGCVNFLGMVFTFLVP 504
Cdd:cd17364 320 TFIVPAEVFPARVRSTCHGISAASGKIGAIVGSFLFLSLTQ-------------NIGVRNVLIILAGVALLGIILTLLFP 386

                ...
gi 2208908  505 EAK 507
Cdd:cd17364 387 EEK 389
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
25-440 1.50e-34

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 133.50  E-value: 1.50e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYyhvdgavkPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMT 104
Cdd:cd17316   1 LLLAGLGWFFDAYDFFLIGFVAPVLAAEF--------SLGLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILT 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  105 LMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAI 184
Cdd:cd17316  73 LLLFGLATLLIGLLPT------PILLLVLRFLQGIGIGGEYPGASTYVAEFAPSKRRGFALGLLQSGWALGALLAALVAS 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  185 IVSASFkagfpapayqdgavastvpEADYVWRIILMFGAIPAALTYYWRMKMpetarytalvaknakqaandmskvlqve 264
Cdd:cd17316 147 LLIPLL-------------------SGDWGWRILFLIGALPALLALLLRRRT---------------------------- 179
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  265 leaeqekvekfaqepantfglftkeflkrhglhlLGTATTWFLLDIAFYSQNLFQKDIFSAIGWIPPAQTMNAIeevfri 344
Cdd:cd17316 180 ----------------------------------LLLILLWFFISFGYYGLTTFLPTYLQTVLGLSPATSSLYL------ 219
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  345 araqtLIALCSTVPGYWFTVFLIDRIGRFIIQWMGFFFMTVFMFALAIpynhwtHKDNRIGFVIMYSLTFFFANFGPNAT 424
Cdd:cd17316 220 -----LLISLGALVGALIAGLLSDRIGRKKTLVIGLILSGILALPLFY------LLSGSPTLLLLLLFILSFFVGGVWGA 288
                       410
                ....*....|....*.
gi 2208908  425 TFVVPAEIFPARLRST 440
Cdd:cd17316 289 LYAYLAELFPTEVRAT 304
Sugar_tr pfam00083
Sugar (and other) transporter;
26-511 6.66e-30

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 122.38  E-value: 6.66e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     26 VIAGMGFFTDAYDLFCISLVTKLLGRIY-YHVDGAVKPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMT 104
Cdd:pfam00083   3 LVAALGGFLFGYDTGVIGAFLTLIDFFKnFGLSKSVSSLAALSVLSGLIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    105 LMLMVIASIASGLSFGDKPKAVmatLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIaavfAMQGFGILAGGMVAI 184
Cdd:pfam00083  83 NVLFVIGAVLQGAAKGKWSVYQ---LIVGRVLVGIGVGGASVLAPMYISEIAPKKLRGALG----SLYQLAITFGILLAY 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    185 IVSASFKAGFpapayqdgavastvpeADYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAK--NAKQAANDMSKVLQ 262
Cdd:pfam00083 156 IFGLGLNKTS----------------NSDGWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRleEAREVLAKLRGVPD 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    263 VELEAEQEKVE-KFAQEPANTfglFTKEFLKRHGlhLLGTATTWFLLDIA----------FYSQNLFQKDIFSaigwipP 331
Cdd:pfam00083 220 VDRELDEIKDSlEAGQEAEKA---SWKELFSTKT--RRQRLLIGVMLQIFqqltginaifYYSTTIFENLGLS------D 288
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    332 AQTMNAIeeVFRIARAQTLIALcstvpgywftvFLIDRIGRFIIQWMGFFFMTVFMFALAIPYNHWTHKDNRIGFVIMYS 411
Cdd:pfam00083 289 SFLVTII--VGVVNFVFTFIAI-----------FLVDRFGRRPLLLLGAAGMAICFVILGIVALLGVSKSDWAGIVAIVF 355
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    412 LTFFFA--NFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQpsdpsktdkgyppGIGVKNALIVL 489
Cdd:pfam00083 356 IALFIAffAMGWGPVPWVIVSELFPLSVRSKAMALATAANWLANFLIGFLFPIITD-------------AIGLGYTFFIF 422
                         490       500
                  ....*....|....*....|...
gi 2208908    490 GCVNFLGMVFTFL-VPEAKGKSL 511
Cdd:pfam00083 423 AGLLVLFIIFVFFfVPETKGRTL 445
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
21-247 1.09e-22

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 98.34  E-value: 1.09e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   21 HFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYyhvdgavkpgTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRV 100
Cdd:COG0477  12 RRRALLALALGTFLEGLDFTIVNVALPSIAADL----------GASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRV 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  101 YGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180
Cdd:COG0477  82 LLIGLLLFGLASLLCGLAPS------PELLIAARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGP 155
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2208908  181 MVAIIVSASFkagfpapayqdgavastvpeadyVWRIILMFGAIPAALTYYWRMKMPETARYTALVA 247
Cdd:COG0477 156 LLGGLLVAAL-----------------------GWRWIFLINAPLGLLALVLRLRLPESRGLLLALL 199
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
8-440 3.26e-20

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 92.80  E-value: 3.26e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908      8 VLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRiyyhvDGAVKPGTLPPNVSAAVNGVAFcgtlaGQLF 87
Cdd:TIGR00895   2 VQNNIRKQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISA-----EWGLDPVQLGFLFSAGLIGMAF-----GALF 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     88 FGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAA 167
Cdd:TIGR00895  72 FGPLADRIGRRRVLLWSILLFSVFTLLCALATN------VTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGL 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    168 VFAmqGFGIlaGGMVaiivsASFKAGFPAPAYQdgavastvpeadyvWRIILMFGAI-PAALTYYWRMKMPETARYtaLV 246
Cdd:TIGR00895 146 MFC--GYPI--GAAV-----GGFLAGWLIPVFG--------------WRSLFYVGGIaPLLLLLLLMRFLPESIDF--LV 200
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    247 AKNAKQAANDMSKVLQVELEAEQEKVEKFAQEPANTFGLFTKEFLKRHGLHLLGTATTWFLLDIAFYsqnlfqkdifSAI 326
Cdd:TIGR00895 201 SKRPETVRRIVNAIAPQMQAEAQSALPEQKSTQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVY----------FLT 270
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    327 GWIPPAQtmnaIEEVFRIARAQTLIAL--CSTVPGYWFTVFLIDRIGRFIIQwMGFFFMTVFMFALAIPYNHwthkdnri 404
Cdd:TIGR00895 271 NWLPKLM----VELGFSLSLAATGGALfnFGGVIGSIIFGWLADRLGPRVTA-LLLLLGAVFAVLVGSTLFS-------- 337
                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 2208908    405 gFVIMYSLTFFFANF--GPNATTFVVPAEIFPARLRST 440
Cdd:TIGR00895 338 -PTLLLLLGAIAGFFvnGGQSGLYALMALFYPTAIRAT 374
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
16-511 8.29e-19

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 89.32  E-value: 8.29e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     16 KTQWYHFTAIVIAGMGFFTDAYDlfcislvTKLLGRIYYHVDGAVKPGTLPPNVSAAV---NGVAFC--GTLAGQLFFGW 90
Cdd:TIGR00879  21 STYWKVALLSLIAAIGGLMFGYD-------TGVIGGALALPAFEFKFTSANSDSYSSSlwgLVVSIFlvGGFIGALFAGW 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     91 LGDKMGRKRvygmTLMLMVIASIASGLSFGDKPKA-VMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAavf 169
Cdd:TIGR00879  94 LSDRFGRKK----SLLIIALLFVIGAILMGLAAFAlSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTS--- 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    170 aMQGFGILAGGMVAIIVSasfkagfpapayqdgaVASTVPEADYVWRIILMFGAIPAALTYYWRMKMPETARYtaLVAKN 249
Cdd:TIGR00879 167 -LYQLAITFGILVAYGFG----------------SGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRW--LVGKG 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    250 AKQAA----------NDMSKVLQVELEAEQEKVEKFAQEPANTFGLFTKEFLKRHGLHLLGTATTWFLL-----DIAFYS 314
Cdd:TIGR00879 228 RVEEArkslarlrgtSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQftginAIMYYS 307
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    315 QNLFQKDIFSAigwiPPAQTMNAIEEVFRIAraQTLIAlcstvpgywftVFLIDRIGRFIIQWMGFFFMTVFMFALAIP- 393
Cdd:TIGR00879 308 PTIFENAGVST----DHAFLVSIIVGAVNFA--FTFVA-----------IFLVDRFGRRPLLLIGAAGMAICLFVLGILg 370
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    394 --YNHWTHKDNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAqpsdpsk 471
Cdd:TIGR00879 371 asFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML------- 443
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|.
gi 2208908    472 tdkgypPGIGVKNALIVLGCVNFLGMVFT-FLVPEAKGKSL 511
Cdd:TIGR00879 444 ------ESIGVGGVFIFFGGLNVLGLIFVyFFLPETKGRTL 478
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
49-438 2.27e-15

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 77.99  E-value: 2.27e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   49 LGRIYYHVDGAVKPGTLPP-----NVSAAVNG----VAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSF 119
Cdd:cd17359   8 LGGLLFGYDTGVINGALPFlqtdfNLTPFLEGlvvsSALLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSP 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  120 gdkpkaVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIaavfAMQGFGILAGGMVAIIVSASFKAGFPAPAY 199
Cdd:cd17359  88 ------NFTIFIIARIIGGLAVGGASALVPMYIAEVAPAEIRGRLV----SLNQLMIVFGQLLAYIVNYLIANAGGADWL 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  200 QDGAvastvpeadyvWRIILMFGAIPAALTYYWRMKMPETARYtaLVAKNAKqaandmSKVLQVELEAEQEkvekfaqep 279
Cdd:cd17359 158 GAEG-----------WRWMLGLEAIPAILFLLGMLFIPESPRW--LVSKGKP------ILIIGIGLAIFQQ--------- 209
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  280 antfglftkeflkrhglhLLGTATtwflldIAFYSQNLFQKDIFSAigwippaqtmnaieevfRIARAQT-LIALCSTVp 358
Cdd:cd17359 210 ------------------FVGINV------IFYYGPEIFQNAGFSE-----------------NAALLQTiGIGVVNVI- 247
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  359 GYWFTVFLIDRIGRFIIQWMGFFFMTVFMFALAIPYNHWTHKDNRiGFVIMYSLTFFFANFGP--NATTFVVPAEIFPAR 436
Cdd:cd17359 248 FTIIAILLVDKVGRKPLLLIGSIGMAISLLLIGTAFYFAPGSQAS-GIVALVLILLFVAFFAMswGPVTWVLLSEIFPNR 326

                ..
gi 2208908  437 LR 438
Cdd:cd17359 327 IR 328
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
15-440 4.79e-15

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 76.55  E-value: 4.79e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   15 AKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYyhvdgavkpgTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK 94
Cdd:COG2814   2 PATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADL----------GASPAQAGLVVTAYLLGAALGAPLAGRLADR 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   95 MGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF 174
Cdd:COG2814  72 FGRRRVLLLGLLLFALGSLLCALAPS------LWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGL 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  175 GILAGGMVAIIVSASFkagfpapayqdgavastvpeadyVWRIILMFGAIPAALTYYW-RMKMPETARytalvaknakqa 253
Cdd:COG2814 146 GPALGPLLGGLLADLF-----------------------GWRWVFLVNAVLALLALLLlLRLLPESRP------------ 190
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  254 andmskvlqveleaeqekvekfaqEPANTFGLFTKEFLKRHGlhLLGTATTWFLLDIAFYSQNLFQKDIFSAIGWIPPAQ 333
Cdd:COG2814 191 ------------------------AARARLRGSLRELLRRPR--LLLLLLLAFLLGFGFFALFTYLPLYLQEVLGLSASA 244
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  334 TMNAIeevfriaraqtLIALCSTVPGYWFTVFLIDRIGRFIIQWMGFFFMTVFMFALAIPYNHWThkdnrigfVIMYSLT 413
Cdd:COG2814 245 AGLLL-----------ALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLWL--------LLLALFL 305
                       410       420
                ....*....|....*....|....*..
gi 2208908  414 FFFANFGPNATTFVVPAEIFPARLRST 440
Cdd:COG2814 306 LGFGFGLLFPLLQALVAELAPPEARGR 332
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
80-441 5.71e-14

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 73.49  E-value: 5.71e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   80 GTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGL--SFGDkpkavmatLCFFRFWLGFGIGGDYPLSATIMSEYAN 157
Cdd:cd17371  46 GGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFaqNYWQ--------LLILRALAGLGFGGEWAAGAALMAEYVP 117
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  158 KKTRGAFIAAVFAmqgfGILAGGMVAIIVSasfkagfpapayqdgAVASTVPEADYVWRIILMFGAIPAALTYYWRMKMP 237
Cdd:cd17371 118 ARHRGKALGYVQS----GWAVGWLLATLLA---------------ALLFPLLPPEIAWRVLFLLGALPALLVLFIRRFVK 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  238 ETARYTALVAKNAKQAAndmskvlqveleaeqekvekfaqePANTFGLFTKEFLKrhgLHLLGTATTWFLLDIAfysqnl 317
Cdd:cd17371 179 EPPQWQAARAARRHFAD------------------------RPSLRELFSPPLLR---TTLLASLLATGALGGY------ 225
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  318 fqkdiFSAIGWIPPAQTMNAIEEVFRIARAQTLIALCSTVpGYWFTVFLIDRIGR---FIIQWMGFFFMTVFMFALAIPY 394
Cdd:cd17371 226 -----YGITTWLPSYLTGERGLSFEGSAGYLVVTILGGFL-GYLAGGFLADRIGRrnnFALFALGSAISILLYFFLPLSP 299
                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*..
gi 2208908  395 NHwthkdnrigFVIMYSLTFFFAnFGPNATTFVVPAEIFPARLRSTC 441
Cdd:cd17371 300 TL---------ILILGFPLGFFA-SGPFSGMGAYLTELFPTAVRATA 336
MFS_KgtP cd17367
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ...
70-440 6.59e-14

Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340925 [Multi-domain]  Cd Length: 407  Bit Score: 73.48  E-value: 6.59e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   70 SAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGL--SFGDKPKAVMATLCFFRFWLGFGIGGDYPL 147
Cdd:cd17367  42 TAAVFAVGFLMRPIGGWLFGRLADRIGRRAALTLSVSLMAAGSLVIAVtpTYATIGIWAPIILLLARLLQGLSVGGEYGT 121
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  148 SATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSASFkagfpapayqdgavasTVPE-ADYVWRIILMFGAIPA 226
Cdd:cd17367 122 SATYLSEVAPPGRRGFYSSFQYVTLIGGQLLALGVLLVLQHTL----------------GEDQmAAWGWRIPFLLGGVLA 185
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  227 ALTYYWRMKMPETARYtalvaKNAKQaandmskvlqvELEAEQEKVEKFAQEPantfglftKEFLKRHGLHLLGTattwf 306
Cdd:cd17367 186 VVVLWLRRGLEETESF-----EAIAE-----------SNEASAGTLRELRRHP--------RELLLVVGLTAGGT----- 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  307 lldIAFYSQNLF-QKDIFSAIGwIPPAQTMnaieevfrIARAQTLIALCSTVPgywFTVFLIDRIGR---FIIQWMGFFF 382
Cdd:cd17367 237 ---LAFYTWTTYlQKFLVNTAG-FSKGDAT--------WITTAALLVFMLLQP---LGGRLSDRIGRrplLLFFGIGGTL 301
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 2208908  383 MTVFMFALAIPYNHWThkdnRIGFVIMYSLTFFFANFGPNAttfVVPAEIFPARLRST 440
Cdd:cd17367 302 ATVPLLSALDHTDSPY----TAFALVLVGLVFLSGYTSINA---VVKAELFPTHVRAL 352
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
62-511 4.69e-13

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 71.07  E-value: 4.69e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   62 PGTLPPNVSAA--VNGVAFCGTLAGQLFFGWLGDKMGRKRvygmTLMLMVIASIASGLSFGDKPKAVMatLCFFRFWLGF 139
Cdd:cd17358  33 SLSLPLTVAQFswFGSLLTLGALIGALLSGKLADRIGRKR----TLLISAIPCILGWLLIAFAKDVWM--LYLGRFLAGF 106
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  140 GIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGgmvaiivsasfkagfpapaYqdgAVASTVPeadyvWRIIL 219
Cdd:cd17358 107 GGGAASVVVPVYIAEIAPKNVRGALGSLNQLLVNIGILLG-------------------Y---VLGSFLP-----WRTLA 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  220 MFGAIPAALTYYWRMKMPETARYtaLVAKNAKQAANDMSKVL-------QVELEAEQEKVEKFAQEPANTFGlftKEFLK 292
Cdd:cd17358 160 LIGAIPPVVFLILLFFIPESPRW--LAKKGREEEAEKSLQFLrgkdadiSKEAAEIQEELAELEKEAKESSF---SDLFQ 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  293 RHGLHLLGTATTWFLLD-------IAFYSQNLFQkdifSAIGWIPPaqtmnaieevfRIAraqTLIALCSTVPGYWFTVF 365
Cdd:cd17358 235 RKYLKPLVIGLGLMLFQqlsginaVIFYASSIFD----EAGSGLDP-----------NTA---TIIIGVVQVVGTLVATL 296
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  366 LIDRIGRFIIQWMGFFFMTVFMFALAIPYNHWTHKDNRIGFVIM----YSLTFFFANFGPNATTFVVPAEIFPARLRS-- 439
Cdd:cd17358 297 LVDRLGRRPLLLVSAIGMGIGLLALGLYFYLQEHGALLSSVSWLplvgLVIYIISFSIGLGPLPWVIMSEIFPAKIKGla 376
                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2208908  440 TCHGISAAAGKAGAIIGAFGFLYAAqpsdpsktdkgyppgIGVKNALIVLGCVNFLGMVFT-FLVPEAKGKSL 511
Cdd:cd17358 377 GSLVTLVNWLFAFIVTKTFPFLTLA---------------WGASGTFWIFAGICGLALVFVlLFVPETKGKSL 434
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
37-440 4.82e-13

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 71.02  E-value: 4.82e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   37 YDLFCISLVTKLL-GRIYYH-VDGAVkpGTLppnVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIA 114
Cdd:cd17369  16 YDFFIYGTAAALVfNKLFFPaVDPAA--GTL---AAFATFGVGFLARPLGGVVFGHFGDRIGRKKTLVLTLLLMGIATFL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  115 SGL-----SFGdkpkaVMAT--LCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAmqgfGILAGGMVAIIVS 187
Cdd:cd17369  91 IGLlptyaQIG-----ILAPilLVLLRLLQGLALGGEWGGAVLMAVEHAPPKRRGFYGSFPQL----GAPVGLLLATGVF 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  188 AsfkagfpapayqdgAVASTVPEADYV---WRIILMFGAIPAALTYYWRMKMPETARYTALVAKNAKQAAndmskvlqve 264
Cdd:cd17369 162 L--------------LLSALLSDEAFLswgWRIPFLLSAVLVAVGLYIRLRLEETPVFRRAKEAGQVVRA---------- 217
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  265 leaeqEKVEKFAQEPantfglftKEFLKRHGLhLLGTATTWFLldIAFYSQNLFQKdifsaIGWIPPAQTMNAIeevfri 344
Cdd:cd17369 218 -----PLVEVLRRHW--------RALLLAIGL-RLAENVLFYL--FTTFALSYATQ-----TLGVDRSTVLLAV------ 270
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  345 araqtLIALCSTVPGYWFTVFLIDRIGRFIIqwmgFFFMTVFMFALAIPYNHWTHKDNRIGFVIMYSLTFFFAN---FGP 421
Cdd:cd17369 271 -----LIASVVAAITIPLFGWLSDRVGRRPV----YLAGALLAALFAFPFFWLLDTGSTWLIVLAAVVVLGVLHgmmYGP 341
                       410
                ....*....|....*....
gi 2208908  422 NATTFvvpAEIFPARLRST 440
Cdd:cd17369 342 QAAFL---AELFPTRVRYT 357
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
57-228 1.43e-12

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 69.15  E-value: 1.43e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   57 DGAVKPGTLPPNVSAAVNGVAFcgtlaGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFW 136
Cdd:cd17365  28 DWGLSPAQLGPVGSAALFGMAI-----GALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQS------VLQLALLRFL 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  137 LGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVsasfkagfpAPAYQdgavastvpeadyvWR 216
Cdd:cd17365  97 TGLGLGAAMPNAITLVSEYAPARRRSLAVTLMFCGYPLGAALGGFLAAAL---------IPAFG--------------WR 153
                       170
                ....*....|..
gi 2208908  217 IILMFGAIPAAL 228
Cdd:cd17365 154 SVFLLGGVPPLI 165
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
15-228 1.47e-11

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 66.05  E-value: 1.47e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   15 AKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYyhvdgavkpgTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK 94
Cdd:COG2271   2 RAPSRYRWRILALLFLAYFLNYLDRSNLSVAAPPLQADL----------GLSAAQLGLLASAFFLGYALGQIPAGLLADR 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   95 MGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF 174
Cdd:COG2271  72 FGRRRVLAIGLLLWGLATLLFGFATS------FWQLLLLRFLLGLGEAGFFPAALKLIAEWFPPKERGRALGIFNAGGPL 145
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....
gi 2208908  175 GILAGGMVAIIVSASFkagfpapayqdgavastvpeadyVWRIILMFGAIPAAL 228
Cdd:COG2271 146 GGALAPPLLGWLLAAF-----------------------GWRAAFLILGLPGLL 176
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
80-440 1.70e-11

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 65.91  E-value: 1.70e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   80 GTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKK 159
Cdd:cd06174  43 GYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPS------FWLLLLGRFLLGLGSGLIDPAVLALIADLFPER 116
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  160 TRGAFIAAVFAMQGFGILAGGMVAIIVSASFKAGfpapayqdgavastvpeadyvWRIILMFGAIPAALTYYWRMKMPET 239
Cdd:cd06174 117 ERGRALGLLQAFGSVGGILGPLLGGILASSLGFG---------------------WRAVFLIAAALALLAAILLLLVVPD 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  240 ARytalvaknakqaandmskvlqveleaEQEKVEKFAQEPANTFGLFTKEFLKRhglHLLGTATTWFLLDIAFYSQNLFQ 319
Cdd:cd06174 176 PP--------------------------ESARAKNEEASSKSVLKLLKRVLKNP---GLWLLLLAIFLVNLAYYSFSTLL 226
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  320 KDIFSAIGWIPPAQTMNAIeevfriaraqtLIALCSTVPGYWFTVFLIDR-IGRFIIQWMGFFFMTVFMFALAIPYNHWt 398
Cdd:cd06174 227 PLFLLDLGGLSVAVAGLLL-----------SLFGLAGALGSLLLGLLSDRlIGRKPLLLIGLLLMALGLALLLLAPSLL- 294
                       330       340       350       360
                ....*....|....*....|....*....|....*....|..
gi 2208908  399 hkdnriGFVIMYSLTFFFAnFGPNATTFVVPAEIFPARLRST 440
Cdd:cd06174 295 ------LLLLLLLLLGFGL-GGLLPLSFALIAELFPPEIRGT 329
PRK03893 PRK03893
putative sialic acid transporter; Provisional
16-261 9.87e-11

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 63.95  E-value: 9.87e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    16 KTQWYHFTAiviAGMGFFTDAYDLFCISLVTKLLGRIYyhvdgavkpgTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKM 95
Cdd:PRK03893  16 RAQWKAFSA---AWLGYLLDGFDFVLITLVLTEVQGEF----------GLTTVQAASLISAAFISRWFGGLLLGAMGDRY 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    96 GRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAfiAAVFAMQGFG 175
Cdd:PRK03893  83 GRRLAMVISIVLFSVGTLACGFAPG------YWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNK--ASGFLISGFS 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   176 IlaGGMVAiivsasfkagfpAPAYqdgavASTVPEadYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAKNAkqAAN 255
Cdd:PRK03893 155 I--GAVVA------------AQVY-----SLVVPV--WGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKA--PVR 211

                 ....*.
gi 2208908   256 DMSKVL 261
Cdd:PRK03893 212 TMVDIL 217
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
20-249 2.36e-10

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 63.46  E-value: 2.36e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     20 YHFTAIVIAGMGFFTDAYDLFCISLVtkllgriyyhVDGAVKPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKR 99
Cdd:TIGR01299 164 FQWALFFVLGLALMADGVEVFVVGFV----------LPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQ 233
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    100 VygmtlmLMVIASIASGLSFGDKPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIA--AVFAMQGfGIL 177
Cdd:TIGR01299 234 C------LLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSwlCMFWMIG-GIY 306
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2208908    178 AGGMVAIIVSA---SFKAGfpaPAYQdgavastvpeaDYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAKN 249
Cdd:TIGR01299 307 AAAMAWAIIPHygwSFQMG---SAYQ-----------FHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKH 367
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
78-511 2.71e-10

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 62.73  E-value: 2.71e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     78 FCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSfgdkPKAVMatLCFFRFWLGFGIGGDYPLSATIMSEYAN 157
Cdd:TIGR00898 137 FVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS----PNYTV--FLVFRLLVGMGIGGIWVQAVVLNTEFLP 210
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    158 KKTRGAF--IAAVFAMQGFGILAGgmvaiivsasfkagfpapayqdgaVASTVPEadyvWRIILMFGAIP--AALTYYWR 233
Cdd:TIGR00898 211 KKQRAIVgtLIQVFFSLGLVLLPL------------------------VAYFIPD----WRWLQLAVSLPtfLFFLLSWF 262
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    234 mkMPETARYTALVAKNAK------QAANDMSKVLQVE---LEAEQEKVEKFAQepANTFGLFTKEFLKRHGLHLLgtaTT 304
Cdd:TIGR00898 263 --VPESPRWLISQGRIEEalkilqRIAKINGKKLPAEvlsLSLEKDLSSSKKQ--YSFLDLFRTPNLRKTTLCLM---ML 335
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    305 WFLLDIAFYSQNLFQKDIFSAIGWIppaqtmnaieevfriaraQTLIALcSTVPGYWFTVFLIDRIGRFIIQWMGFFFMT 384
Cdd:TIGR00898 336 WFTTAFSYYGLVLDLGNLGGNIYLD------------------LFISGL-VELPAKLITLLLIDRLGRRYTMAASLLLAG 396
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    385 VFMFAL-AIPynhwthkdNRIGFVIMySLTfFFANFGPNA---TTFVVPAEIFPARLR----STChgiSAAAGKAGAIIG 456
Cdd:TIGR00898 397 VALLLLlFVP--------VDLYFLRT-ALA-VLGKFGITSafqMVYLYTAELYPTVVRnlgvGVC---STMARVGSIISP 463
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2208908    457 AFGFLYAAQPSDPsktdkgyppgigvknaLIVLGCVNFLGMVFTFLVPEAKGKSL 511
Cdd:TIGR00898 464 FLVYLGEKWLFLP----------------LVLFGGLALLAGILTLFLPETKGVPL 502
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
65-228 4.00e-10

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 61.84  E-value: 4.00e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   65 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGDKPKAVMATLCFFrfwlGFGIGGD 144
Cdd:COG2211 261 LSAALVGLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLGPGNLWLLLVLAALA----GIGLGAI 336
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  145 YPLSATIMS---EYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSASFKAGFpapayqdGAVASTVPEADYVWRIILMF 221
Cdd:COG2211 337 LVLPWAMLAdvvDYDEWKTGRRREGLYFGIFTFAIKLGQALAGALAGLLLALF-------GYVAGAAQSPSALTGIRLLF 409

                ....*..
gi 2208908  222 GAIPAAL 228
Cdd:COG2211 410 FLLPAVL 416
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
25-511 4.02e-10

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 61.88  E-value: 4.02e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   25 IVIAGMGFFTDAYDLFCIS--LVTKLLGRIYYHVDGAVKPGTLPP-NVSAAVNGvafcGTLAGQLFFGWLGDKMGRKRVY 101
Cdd:cd17356   3 CAFVSLGGFLFGYDTGSISgiLNMKSFQKYFADNTGTYYPSSSRQgLIVSIVNL----GSFFGALISSFLSDRIGRKKSI 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  102 GMTLMLMVIASIASGLSFGDKPKAVMAtlcffRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAavfaMQGFGILAGGM 181
Cdd:cd17356  79 QIGCVIYIIGAIIQVAAIGKWYQLIVG-----RIIAGLGVGFASVLVPVYQSEVAPKHIRGTLVS----LYQLAITIGIL 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  182 VAIIVSASFKAGFPAPAYQdgaVASTVpeaDYVWRIILMFGAIpaaltyywrmKMPETARYtalvaknakqaandmskvl 261
Cdd:cd17356 150 VAYCINYGTHKLDGSAQWR---IPLGL---QIVWGLLLLIGMF----------FLPESPRW------------------- 194
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  262 qveleaeqekvekfaqepantfglftkefLKRHglhLLGTATTWFL----LDIAF-YSQNLFQKDIFSAigwippaqtmn 336
Cdd:cd17356 195 -----------------------------LYRT---ILGIMLQLFQqltgINYFFyYGTTIFQSTGLTG----------- 231
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  337 aiEEVFRIARAQTLIALCSTVPGywftVFLIDRIGRFIIQWMGFFFMTVFMFALAI------PYNHWTHKDNR-----IG 405
Cdd:cd17356 232 --SSPLLTSIILYIVNFVSTIPG----LFFVDKFGRRTCLLIGAAGMSICLFIYAAvgvrylIPNPQSGTSNKsagngMI 305
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  406 FVIMYSLTFFFANFGPnaTTFVVPAEIFPARLRSTChgisaaAGKAGAIIGAFGFLYA-AQPSDPSKTDKGYppgigvkn 484
Cdd:cd17356 306 VFICLFIFSFATTWGP--IAWVYVAEVFPLRVRSKG------MALATAFNWLWNFLISfFTPFIIGSIGFKY-------- 369
                       490       500
                ....*....|....*....|....*...
gi 2208908  485 aLIVLGCVNFLGMVFT-FLVPEAKGKSL 511
Cdd:cd17356 370 -YYIFAGCNLLAFIVVfFFVPETKGLTL 396
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
72-440 9.14e-10

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 60.74  E-value: 9.14e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   72 AVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFgdkpkavMATLC----FFRFWLGFGIGGDYPL 147
Cdd:cd17357  53 LIVSIFFIGGAIGSFISAFLANRFGRKNGLLISNALLVVSSLLMFLSK-------SAKSPelliFGRFLVGIACGLSTGF 125
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  148 SATIMSEYANKKTRGAFiaavfamqGFGILAGGMVAIIVSASFkaGFPapaYQDGAVastvpeadYVWRIILMFGAIPAA 227
Cdd:cd17357 126 VPMYLQEISPSELRGAL--------GSLTQIGVTLGILLGQVF--GLP---SVLGTE--------TLWPYLLFFPGIPAL 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  228 LTYYWRMKMPETARYTALVAKNAKQAA-------NDMSKVLQVELEAEQEKVEKFAQEPANTFGLFTKEFLKRHGLHLLG 300
Cdd:cd17357 185 LQLAALPFFPESPKFLLISKGDEEEAEkslkflrGIEDDVDQELEEIKKESEQMGDQKQVSLMQLLRDPSLRLPLLLVLV 264
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  301 TATTWFLLDIafYSQNLFQKDIFSAIGWIPpaqtmnaiEEVFRIARAQTLIALCSTVPGywftVFLIDRIGRFIIQWMGF 380
Cdd:cd17357 265 VSASQQFSGI--NAIFFYSTFIFENAGFSP--------QLAEWANLGIGIVNVLSTIVG----PFLIEKVGRRPLLLISL 330
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2208908  381 FFMTVFMFALAI---PYNHWTHKDNR-IGFVIMYslTFFFAnFGPNATTFVVPAEIFPARLRST 440
Cdd:cd17357 331 SVCAVALLLMSVflfLSEQNSWMSYGcIVAIFLF--IFFFA-IGLGPIPWFIGAELFPQAPRSA 391
MFS_1 pfam07690
Major Facilitator Superfamily;
65-205 1.61e-09

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 59.74  E-value: 1.61e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     65 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGD 144
Cdd:pfam07690  29 ISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASS------LWLLLVLRVLQGLGAGAL 102
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2208908    145 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSASFkaGFPAPAYQDGAVA 205
Cdd:pfam07690 103 FPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLF--GWRAAFLILAILS 161
PRK10642 PRK10642
proline/glycine betaine transporter ProP;
24-251 7.95e-09

proline/glycine betaine transporter ProP;


Pssm-ID: 182611 [Multi-domain]  Cd Length: 490  Bit Score: 58.18  E-value: 7.95e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYhvdgavkpgtlpPNVSAAVNGVAFCGTLA--------GQLFFGWLGDKM 95
Cdd:PRK10642  17 AITAASLGNAMEWFDFGVYGFVAYALGKVFF------------PGADPSVQMIAALATFSvpflirplGGLFFGMLGDKY 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    96 GRKRVYGMTLMLMVIASIASGLSFGDKPKAVMAT--LCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGaFIAAVF---A 170
Cdd:PRK10642  85 GRQKILAITIVIMSISTFCIGLIPSYATIGIWAPilLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRG-FMGSWLdfgS 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   171 MQGFgILAGGMVAIIVSASFKAGFpapayqdgavastvpeADYVWRIILmFGAIPAALT-YYWRMKMPETARYTALVAKN 249
Cdd:PRK10642 164 IAGF-VLGAGVVVLISTIVGEANF----------------LDWGWRIPF-FIALPLGIIgLYLRHALEETPAFQQHVDKL 225

                 ..
gi 2208908   250 AK 251
Cdd:PRK10642 226 EQ 227
MFS_SV2B cd17438
Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; ...
26-322 1.15e-08

Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2B is a key modulator of amyloid toxicity at the synaptic site and also has an essential role in the formation and maintenance of the glomerular capillary wall. SV2B belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340996 [Multi-domain]  Cd Length: 477  Bit Score: 57.63  E-value: 1.15e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   26 VIAGMGFFTDAYDLFCISLVtkllgriyyhVDGAVKPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTL 105
Cdd:cd17438   2 FVLGLALMADGVEVFVVGFV----------LPSAEKDMCLSSSNKGMLGLIVYLGMMAGAFIWGGLADKLGRKRCLIISL 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  106 MLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIA--AVFAMQGfGILAGGMVA 183
Cdd:cd17438  72 AINASFAFLSSFVQG------YGAFLFCRLISGFGIGGSLPIVFAYFSEFLAREKRGEHLSwlCMFWMIG-GLYASAMAW 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  184 IIVsasfkagfpaPAYQDGAVASTVPEAdYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAKNaKQAANDMSKVLQV 263
Cdd:cd17438 145 SII----------PHYGWGFSMGTNYHF-HSWRVFVIICALPCIASIIALKFMPESPRFLLEMGKH-DEAWMILKNIHDT 212
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2208908  264 ELEA--EQEKVekfaqepantfglFTKEFLKRHGLHLLgtATTWFLLDIAFYSQNLFQKDI 322
Cdd:cd17438 213 NMRAkgTPEKV-------------FTVSNIKRKNTLFL--AVVWFTMAFSYYGLTVWFPDM 258
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
64-441 1.21e-08

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 56.81  E-value: 1.21e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   64 TLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGDkpkavmATLCFFRFWLGFGIGG 143
Cdd:cd17315  30 GLSTSLQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNV------WVLIVGRFLLGLGVGL 103
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSASFKAGfpapayqdgavastvpeadyvWRIILMFGA 223
Cdd:cd17315 104 ASVLVPLYISEIAPAKIRGALGTLNQLMITFGILLAYLLGLALSLSPPGW---------------------WRLMFALAA 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  224 IPAALTYYWRMKMPEtarytalvaknakqaandmSKVLqveleaeqekvekfaqepantfglftkeflkrhglhLLGTAT 303
Cdd:cd17315 163 VPALLQLLLMFFLPE-------------------SRAL------------------------------------LVGVGL 187
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  304 twflldiafysqNLFQKdiFSAIGWIppaqtMNAIEEVFRIARAQTLIALCSTVPGYWFTVF------LIDRIGRFIIQW 377
Cdd:cd17315 188 ------------QLLQQ--LTGINAV-----MYYAPTIFKSAGGGTASILASIIVGVVNLLAtlvairLVDKVGRRPLLL 248
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2208908  378 MGFFFMTVFMFALAIPyNHWTHKDNRIGFVIMYSLTFFFANF--GPNATTFVVPAEIFPARLRSTC 441
Cdd:cd17315 249 IGFAGMAASLLLLAIA-FLLPALAKAAGWLALLGILLYIAAFamGAGPVPWLLLSEIFPLRIRGKG 313
PRK09952 PRK09952
shikimate transporter; Provisional
67-251 1.26e-08

shikimate transporter; Provisional


Pssm-ID: 182163 [Multi-domain]  Cd Length: 438  Bit Score: 57.43  E-value: 1.26e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    67 PNVSAAVN--------GVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGL--SFGDKPKAVMATLCFFRFW 136
Cdd:PRK09952  55 PQVSPAMGtlaafatfGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLlpSFSTIGWWAPVLLVTLRAI 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   137 LGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG-ILAGGMVAIIVSASFKAGFpapayqdgavastvpeADYVW 215
Cdd:PRK09952 135 QGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGlLLSTGLVSLISMMTTDEQF----------------LSWGW 198
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 2208908   216 RIILMFGAIPAALTYYWRMKMPETARYTALVAKNAK 251
Cdd:PRK09952 199 RIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAA 234
MFS_SV2 cd17363
Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic ...
29-313 1.78e-08

Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. The SV2 family belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340921 [Multi-domain]  Cd Length: 474  Bit Score: 56.73  E-value: 1.78e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   29 GMGFFTDAYDLFCISLVtkllgriyyhVDGAVKPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLM 108
Cdd:cd17363   5 GLALMADGVEVFVVGFV----------LPSAEKDMCLSNSNKGMLGLIVYLGMMVGAFVWGGLADKLGRKQCLLIALSVN 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  109 VIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIA--AVFAMQGfGILAGGMVAIIV 186
Cdd:cd17363  75 GVFAFLSSFVQG------YGFFLFCRLLSGIGIGGSIPIVFSYFAEFLAREKRGEHLSwlCMFWMIG-GLYASAMAWAII 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  187 SA---SFKAGfpaPAYQdgavastvpeaDYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAKNaKQAANDMSKVLQV 263
Cdd:cd17363 148 PHygwGFSMG---TAYQ-----------FHSWRVFVIVCALPSVASVVALTFMPESPRFLLEVGKH-DEAWMILKQVHDT 212
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 2208908  264 ELEA--EQEKVekfaqepantfglFTKEFLKRhgLHLLGTATTWFLLDIAFY 313
Cdd:cd17363 213 NMRAkgHPERV-------------FTVSHIKR--MNTLFLAIVWFTMSFSYY 249
xylE PRK10077
D-xylose transporter XylE; Provisional
15-440 5.94e-08

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 55.08  E-value: 5.94e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    15 AKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYyhvdgaVKPGTLPPNVSAAVNGV----AFCGTLAGQLFFGW 90
Cdd:PRK10077   4 QYNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVF------VAPQNLSESAANSLLGFcvasALIGCIIGGALGGY 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    91 LGDKMGRKRVYGMTLMLMVIASIASG------LSFGDKPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAF 164
Cdd:PRK10077  78 CSNRFGRRDSLKIAAVLFFISALGSAwpefgfTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   165 IaavfAMQGFGILAGGMVAIIVSASFKAGfpapayqdGAVASTVpeaDYVWRIILMFGAIPAALTYYWRMKMPETARYTA 244
Cdd:PRK10077 158 V----SFNQFAIIFGQLVVYFVNYFIARS--------GDASWLN---TDGWRYMFASEAIPALLFLMLLYFVPETPRYLM 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   245 LVAKNaKQAANDMSKVLqveleaEQEKVEKFAQEPANTFglftkEFLKRHGLHLLGTATTWFLLDIAFysqNLFQKdifs 324
Cdd:PRK10077 223 SRGKQ-EQAEGILRKIM------GNTLATQALQEIKHSL-----DHGRKTGGKLLMFGVGVIVIGVML---SVFQQ---- 283
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   325 AIGwippaqtMNAI----EEVFRIARAQTLIALCSTV----PGYWFTV---FLIDRIGRFIIQWMGFFFMTVFMFALAIP 393
Cdd:PRK10077 284 FVG-------INVVlyyaPEIFKTLGASTDIALLQTIivgvINLTFTVlaiMTVDKFGRKPLQIIGALGMAIGMFSLGTA 356
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|.
gi 2208908   394 YNHwthkdNRIGFVIMYSLTFFFANF----GPnaTTFVVPAEIFPARLRST 440
Cdd:PRK10077 357 FYT-----QAPGIVALLSMLFYVAAFamswGP--VCWVLLSEIFPNAIRGK 400
MFS_SVOP cd17441
Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic ...
26-242 2.08e-07

Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein (SVOP) is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. This SVOP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340999 [Multi-domain]  Cd Length: 372  Bit Score: 53.28  E-value: 2.08e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   26 VIAGMGFFTDAYDLFCISLVTKLLgriyyHVDGAvkpgtLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTL 105
Cdd:cd17441   2 ILTGLAWMADAMEMMILSILAPQL-----HCEWR-----LPSWQVALLTSVVFIGMMLSSSLWGNISDQYGRKTGLKISV 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  106 MLMVIASIASGLSfgdkpkAVMATLCFFRFWLGFGIGGdYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAII 185
Cdd:cd17441  72 LWTLYYGILSAFA------PIYSWILVLRGLVGFGIGG-VPQSVTLYAEFLPMKSRAKCILLIEVFWALGTVFEVLLAVF 144
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 2208908  186 VSASFKagfpapayqdgavastvpeadyvWRIILMFGAIPAALTYYWRMKMPETARY 242
Cdd:cd17441 145 VMPTLG-----------------------WRWLLILSALPLLIFAVLCFWLPESARY 178
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
65-194 2.40e-07

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 52.95  E-value: 2.40e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   65 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGDKPKAVMATLCFFrfwlGFGIGGD 144
Cdd:COG2271 213 LSLAQAGLLLSLPFLAGIVGSLLGGWLSDRLGRRRKLVLAIGLLLAALALLLLALLPSPALAIALLFLA----GFGLGGA 288
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 2208908  145 YPLSATIMSEYANKKTRGafiaAVFAMQGFGILAGGMVAIIVSASFKAGF 194
Cdd:COG2271 289 FGLLWALAAELFPKKARG----TASGLVNTFGFLGGALGPLLVGYLLDAT 334
MFS_SV2C cd17440
Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; ...
27-249 2.63e-07

Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2C exhibits enriched expression in several basal ganglia nuclei, and has been found to be involved in normal operation of the basal ganglia network and could be also be involved in system adaptation in basal ganglia pathological conditions. SV2C belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340998 [Multi-domain]  Cd Length: 479  Bit Score: 52.99  E-value: 2.63e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   27 IAGMGFFTDAYDLFCISLVtkllgriyyhVDGAVKPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVygmtlm 106
Cdd:cd17440   3 VLGMALMADGVEVFVVGFV----------LPSAETDMCIPNSGSGWLGSIVYLGMMVGAFFWGGLADKVGRRQS------ 66
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  107 LMVIASIASGLSFGDKPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIA--AVFAMQGfGILAGGMVAI 184
Cdd:cd17440  67 LLICMSVNGFFAFLSSFVQGYGLFLFCRLLSGFGIGGAVPTVFSYFAEVLAREKRGEHLSwlCMFWMIG-GIYASAMAWA 145
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2208908  185 IV---SASFKAGfpaPAYQdgavastvpeaDYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAKN 249
Cdd:cd17440 146 IIphyGWSFSMG---SAYQ-----------FHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKH 199
PRK12307 PRK12307
MFS transporter;
76-242 2.65e-07

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 53.01  E-value: 2.65e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    76 VAFCGTLAGQLFFGWLGDKMGRKRvygMTLMLMVIASIASGLSfGDKPKAVMATLCffRFWLGFGIGGDYPLSATIMSEY 155
Cdd:PRK12307  61 AAFIGRPFGGALFGLLADKFGRKP---LMMWSIVAYSVGTGLS-GLASGVIMLTLS--RFIVGMGMAGEYACASTYAVES 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   156 ANKKTRGAfiAAVFAMQGFGIlaGGMVAIIVSASFKAGfpapayqdgavastvpeadYVWRIILMFGAIPAALTYYWRMK 235
Cdd:PRK12307 135 WPKHLKSK--ASAFLVSGFGI--GNIIAAYFMPSFAEA-------------------YGWRAAFFVGLLPVLLVIYIRAR 191

                 ....*..
gi 2208908   236 MPETARY 242
Cdd:PRK12307 192 APESKEW 198
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
83-179 3.16e-07

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 52.57  E-value: 3.16e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   83 AGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRG 162
Cdd:cd17502  45 AFQPIYGKLSDLFGRKWVLLIAIVIFELGSLLCGLAPN------MTMLIVGRAIQGIGGGGLMSLAFIIIADLVPPRERG 118
                        90
                ....*....|....*..
gi 2208908  163 AFIAAVFAMQGFGILAG 179
Cdd:cd17502 119 KYQGYIGAVFGIASVAG 135
MFS_SV2A cd17439
Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; ...
27-242 4.94e-07

Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. It is unclear how SV2A is involved in correct SV function, but it has been suggested to either act as a transporter or a regulator of exocytosis by mediating Ca2+ dynamics. SV2A has been identified as the molecular target of the antiepileptic drug levetiracetam (LEV). Its expression is decreased in patients with epilepsy and in epileptic animal models. SV2A belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340997 [Multi-domain]  Cd Length: 478  Bit Score: 52.34  E-value: 4.94e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   27 IAGMGFFTDAYDLFCISLVtkllgriyyhVDGAVKPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVygmtlm 106
Cdd:cd17439   3 VLGLALMADGVEVFVVGFV----------LPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRIGRRQC------ 66
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  107 LMVIASIASGLSFGDKPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIA--AVFAMQGfGILAGGMVAI 184
Cdd:cd17439  67 LLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSwlCMFWMIG-GIYASAMAWA 145
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2208908  185 IVSA---SFKAGfpaPAYQdgavastvpeaDYVWRIILMFGAIPAALTYYWRMKMPETARY 242
Cdd:cd17439 146 IIPHygwSFQMG---SAYQ-----------FHSWRVFVLVCAFPSVFAIGALTTMPESPRF 192
MFS_ProP cd17366
Proline/betaine transporter of the Major Facilitator Superfamily of transporters; This ...
76-188 5.45e-07

Proline/betaine transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of Escherichia coli proline/betaine transporter, also called proline porter II (PPII), and similar proteins. ProP is a proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in the bacterial osmoregulatory response. The ProP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340924 [Multi-domain]  Cd Length: 377  Bit Score: 51.97  E-value: 5.45e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   76 VAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGL--SFGDKPKAVMATLCFFRFWLGFGIGGDYPLSATIMS 153
Cdd:cd17366  48 VAFLVRPLGGLVFGPLGDKYGRQKVLAITIILMAASTFCIGLlpTYATIGVWAPILLLLARMVQGFSTGGEYGGAATFVA 127
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 2208908  154 EYANKKTRGaFIAAVFAMQGFG--ILAGGMVAIIVSA 188
Cdd:cd17366 128 EYAPDRKRG-FLGSWLEFGTLAgfILGAGLVTLLTLL 163
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
20-190 7.35e-07

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 51.42  E-value: 7.35e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   20 YHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYyhvdgavkpgTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKR 99
Cdd:COG2223   2 GRWRVLLLATLAFFLAFGVWYLWSVLAPPLAEEF----------GLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRR 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  100 VYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179
Cdd:COG2223  72 VLLIGLLLLGIGLLLLALAVS------YWLLLLLGLLLGIGGGGSFAVGIALVSKWFPPDRRGLALGLAAGGGNLGAAVA 145
                       170
                ....*....|.
gi 2208908  180 GMVAIIVSASF 190
Cdd:COG2223 146 AFLAPLLIAAF 156
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
69-190 7.61e-07

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 51.40  E-value: 7.61e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   69 VSAAVNGVAFcgtlaGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLS 148
Cdd:cd17324  40 VSAYALGYAL-----GALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPS------FALLLLARALAGLAHGGFWAIA 108
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 2208908  149 ATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSASF 190
Cdd:cd17324 109 AAYAADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLL 150
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
65-176 8.36e-07

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 51.13  E-value: 8.36e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   65 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGD 144
Cdd:COG2814 240 LSASAAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGS------LWLLLLALFLLGFGFGLL 313
                        90       100       110
                ....*....|....*....|....*....|..
gi 2208908  145 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176
Cdd:COG2814 314 FPLLQALVAELAPPEARGRASGLYNSAFFLGG 345
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
65-199 1.29e-06

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 50.68  E-value: 1.29e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   65 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGDKPkavmATLCFFRFWLGFGIGGD 144
Cdd:cd17316 210 LSPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLILSGILALPLFYLLSGSP----TLLLLLLFILSFFVGGV 285
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 2208908  145 YPLSATIMSEYANKKTRGAFIAAVFAMqGFGILAGGMVAIIVSASFKAGFPAPAY 199
Cdd:cd17316 286 WGALYAYLAELFPTEVRATGVGLSYNL-GRLGGGGAPPLIALLLASTGGTGVPAL 339
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
80-187 1.70e-06

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 50.35  E-value: 1.70e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    80 GTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSfgdkpkAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKK 159
Cdd:PRK11551  62 GLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR 135
                         90       100
                 ....*....|....*....|....*...
gi 2208908   160 TRGAFIAAVFAmqgfGILAGGMVAIIVS 187
Cdd:PRK11551 136 LRGTAVSLMYC----GVPFGGALASVIG 159
MFS_GLUT_Class1 cd17431
Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
24-509 5.77e-06

Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-4 are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT1, also called solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1), displays broad substrate specificity and can transport a wide range of pentoses and hexoses including glucose, galactose, mannose, and glucosamine. It is found in the brain, erythrocytes, and in many fetal tissues. GLUT2 (or SLC2A2) is found in the liver, islet of Langerhans, intestine, and kidney, and is the isoform that likely mediates the bidirectional transfer of glucose across the plasma membrane of hepatocytes and is responsible for uptake of glucose by beta cells. GLUT3 (or SLC2A3) is found in the brain and can mediates the uptake of glucose, 2-deoxyglucose, galactose, mannose, xylose and fucose, and dehydroascorbate. GLUT4 (or SLC2A4) is an insulin-regulated facilitative glucose transporter found in adipose tissues, and in skeletal and cardiac muscle. GLUT14 (or SLC2A14) is an orphan transporter expressed mainly in the testis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340989 [Multi-domain]  Cd Length: 445  Bit Score: 48.87  E-value: 5.77e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAVKPGTLPP-------NVSAAVNGVafcGTLAGQLFFGWLGDKMG 96
Cdd:cd17431   2 AVFVAVLGSLQFGYNTGVINAPQKVIEEFYNKTLGDRYGEPISPetlttlwSLSVAIFSV---GGMIGSFSVGLFVNRFG 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   97 RKRVYGMTLMLMVIASIASGLSfgdKPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFiaavFAMQGFGI 176
Cdd:cd17431  79 RRNSMLYNNLLAFAGAALMGLS---KLAKSYEMLILGRFIIGLYCGLTTGLVPMYIGEISPTALRGAL----GTLHQLGI 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  177 LAGGMVAIIVSASFKAGfpapayqdgavastvpeADYVWRIILMFGAIPAALTYYWRMKMPETARYTALV------AKNA 250
Cdd:cd17431 152 VVGILISQIFGLEFILG-----------------TEELWPLLLGFTIVPAILQLALLPFCPESPRYLLINrneeeeAKSV 214
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  251 KQAANDMSKVLQVELEAEQEKVEKFAQEPANTFGLFTKEFLKRH---GLHLLGTATTWFLLDIAFYSQNLFQKD-----I 322
Cdd:cd17431 215 LKKLRGTTDVSEDIQEMKEESRQMMREKKVTILELFRSSSYRQPiiiAIVLQLSQQLSGINAVFYYSTSIFEKAgvqqpV 294
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  323 FSAIGwippaqtMNAIEEVFriaraqTLIalcstvpgywfTVFLIDRIGR---FIIQWMGFFFMTVFM-FALAIPYN-HW 397
Cdd:cd17431 295 YATIG-------AGVVNTIF------TVV-----------SLFLVERAGRrtlHLIGLGGMAICAILMtIALLLLEGyPW 350
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  398 ThkdNRIGFVIMYSLTFFFAnFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQPSDPSktdkgyp 477
Cdd:cd17431 351 M---SYVSIVAIFGFVAFFE-IGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTSNFIVGMCFQYIANLCGPY------- 419
                       490       500       510
                ....*....|....*....|....*....|...
gi 2208908  478 pgigvknALIVLGCVNFLGMVFTFL-VPEAKGK 509
Cdd:cd17431 420 -------VFIIFTVFLLTFFIFTYFkVPETKGK 445
MFS_GLUT_Class2 cd17432
Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
80-433 6.49e-06

Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT5, also called Solute carrier family 2, facilitated glucose transporter member 5 (SLC2A5), is a well-established fructose transporter found in the small intestine. GLUT7 (or SLC2A7) is a high-affinity glucose and fructose transporter expressed in the small intestine and colon. GLUT9 (or SLC2A9) transports urate and fructose, and is most strongly expressed in the basolateral membranes of proximal renal tubular cells, liver and placenta. It may play a role in urate reabsorption by proximal tubules. GLUT11 (or SLC2A11) is a facilitative glucose transporter expressed in heart and skeletal muscle. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340990 [Multi-domain]  Cd Length: 452  Bit Score: 48.77  E-value: 6.49e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   80 GTLAGQLFFGWLGDKMGRKRvygmTLML----MVIASIASGLSfgdKPKAVMATLCFFRFWLGF--GIGgdypLSATIM- 152
Cdd:cd17432  62 GGLFGSLLVGPLVIRLGRKG----TLLLnnifAIVAAILMGLS---KIAKSFEMIIVGRFLVGInaGIS----LNVVPMy 130
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  153 -SEYANKKTRGAfIAAVFA-MQGFGILAGGMVAIivsasfkagfpapayqdgavastvPE---ADYVWRIILMFGAIPAA 227
Cdd:cd17432 131 lGESAPKNLRGA-VGLVPAiFITLGILLGQVLGL------------------------REllgNEEGWPLLLALTGVPAL 185
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  228 LTYYWRMKMPETARYTaLVAKNAKQAA----------NDMSKVLQvELEAEQeKVEKfAQEPANTFGLFTKEFLKRH--- 294
Cdd:cd17432 186 LQLLTLPFFPESPRYL-LIEKGDEEAArkalqrlrgkEDVDDEME-EMLEEQ-RAEK-GVGTVSVLELFRDRSVRWQlis 261
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  295 ------GLHLLGTATTWFLLDiafysqnlfqkDIFSAIGwIPPAQTMNAieeVFRIARAQTLIALCStvpgywftVFLID 368
Cdd:cd17432 262 iivlmaGQQLCGINAIYFYAD-----------SIFLEAG-IPEDKIQYV---TVGTGACEVLATITC--------VLVIE 318
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2208908  369 RIGRFIIQWMGFFFMT----VFMFALA-------IPYnhwthkdnrIGFVIMYSLTFFFAnFGPNATTFVVPAEIF 433
Cdd:cd17432 319 RLGRRPLLIGGFGLMAvwcaVLTVALSlqntvswMPY---------LSIVCIFAYIASFG-IGPAGVPFILTTEIF 384
MFS_CitA cd17368
Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton ...
25-441 6.71e-06

Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton symporter, also called citrate carrier protein or citrate transporter or citrate utilization protein A (CitA), is a proton symporter that functions in the uptake of citrate across the boundary membrane. It allows the utilization of citrate as a sole source of carbon and energy. In Klebsiella pneumoniae, the gene encoding this protein is called citH, instead of citA, which is the case for Escherichia coli and other organisms. CitA belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340926 [Multi-domain]  Cd Length: 407  Bit Score: 48.52  E-value: 6.71e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAVKPGTLppnvSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMT 104
Cdd:cd17368   1 ILAATSGNALEFFDFGVYGFFAVYIGRLFFPSGSEFASLLL----TFATFGVGFFMRPIGAIVLGAYADRIGRKPAMTLT 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  105 LMLMVIAS--IASGLSFGDKPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMV 182
Cdd:cd17368  77 LAIMALGTllIALAPTYATIGIAAPLLVLLARLLQGFAAGGEVGGVTAYLVEAAPPGRRGFYTSWQSASQQVAIVAGALV 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  183 AIIVSASfkagFPAPAYQDGAvastvpeadyvWRIILMFGAIPAALTYYWRMKMPETarytalvaknakqaandmskvlq 262
Cdd:cd17368 157 GYLLSLT----LTAEALAEWG-----------WRIPFFIGLLIIPLGLWLRRSLEET----------------------- 198
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  263 velEAEQE-KVEKFAQEPANTFGLFTKEFLKRHGLHLLGTATTWFLLdiafysqnlfqkdiFSAIGWIPPAQTMNAieev 341
Cdd:cd17368 199 ---EAFLErKARPTRRELFALLANNRRIILLGMLLVAGSTVTFYFTT--------------VYTPTYAKTVLGLSA---- 257
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  342 fRIARAQTLIALCSTVPGYWFTVFLIDRIGRFIIqwmgFFFMTVFMFALAIPYNHWTHKDNRIGFVIMYSLTFFFANFGP 421
Cdd:cd17368 258 -RDSFLVTLLAGVANFIWAPLGGALSDRIGRRPV----LLVITLAALVTLYPVFAWLTAAPSFGRLLLVLLVLSFFFGMY 332
                       410       420
                ....*....|....*....|
gi 2208908  422 NATTFVVPAEIFPARLRSTC 441
Cdd:cd17368 333 GGAMVVALVELFPVRVRSTG 352
MFS_1 pfam07690
Major Facilitator Superfamily;
65-179 7.29e-06

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 48.18  E-value: 7.29e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     65 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGDKPKAVMATLCFFrfwLGFGIGGD 144
Cdd:pfam07690 232 LSALLAGLLLGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLL---LGFGFGLV 308
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2208908    145 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179
Cdd:pfam07690 309 FPALNALVSDLAPKEERGTASGLYNTAGSLGGALG 343
PRK10406 PRK10406
alpha-ketoglutarate transporter; Provisional
24-250 8.43e-06

alpha-ketoglutarate transporter; Provisional


Pssm-ID: 182433 [Multi-domain]  Cd Length: 432  Bit Score: 48.27  E-value: 8.43e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAvkpgTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKR---- 99
Cdd:PRK10406  23 AIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNT----TTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKsmli 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   100 -VYGMTLMLMVIASIASGLSFGDKPKAVmatLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGaFIAavfAMQGFGILA 178
Cdd:PRK10406  99 sVCMMCFGSLVIACLPGYETIGTWAPAL---LLLARLFQGLSVGGEYGTSATYMSEVAVEGRKG-FYA---SFQYVTLIG 171
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2208908   179 GGMVAIIVSASFKagfpapayqdgAVASTVPEADYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAKNA 250
Cdd:PRK10406 172 GQLLALLVVVVLQ-----------QTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRALKEA 232
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
27-505 1.13e-05

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 47.65  E-value: 1.13e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   27 IAGMGFFTDAYDLFCISLVTKLLGRIYYHVD-GAVKPGTLppnVSAAVNGvAFCGTLAGqlffGWLGDKMGRKRVYGMTL 105
Cdd:cd17360   1 FAGIGGFLFGYDTGVISGALLYIKDDLGEVVlSTGWQELI---VSSTVAG-AAVGAAIG----GWLNDRFGRRPCILLAD 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  106 MLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAvfamQGFGILAGGMVAII 185
Cdd:cd17360  73 ALFTIGAIVMAAAPN------KEVLIVGRVLVGLGVGIASMTVPLYIAEAAPPRIRGRLVTI----NVLFITGGQFVAYV 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  186 VSASFKagfpapaYQDGAvastvpeadyvWRIILMFGAIPAALTYYWRMKMPETARYT----ALVAKNAKQAANDMSKVl 261
Cdd:cd17360 143 INGAFS-------YLPGG-----------WRWMLGLAAVPAVLQFIGLLFLPESPRWPstrrALIVGCGLQAFQQFSGI- 203
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  262 qveleaeqekvekfaqepaNTFGLFTKEFLKRHGLHLLGTATtWFLLDIAFysqnlfqkdifsaigwippaqtMNAIeev 341
Cdd:cd17360 204 -------------------NTVMYYSATILQMAGFKDNQNAI-WLSLIVAG----------------------TNFI--- 238
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  342 friaraQTLIAlcstvpgywftVFLIDRIGRFIIQWMGFFFMTVFMFALAIpynhWThkdnRIGFVIMYsLTFFFANFGP 421
Cdd:cd17360 239 ------FTIVG-----------MYLIDKFGRRKLLLISLFGVIVALVVLAV----WL----ALVGLILY-LAFFAPGMGP 292
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  422 naTTFVVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQpsdpsktdkgyppGIGVKNALIVLGCVNFLGMVFT- 500
Cdd:cd17360 293 --VPWTVNSEIYPLWARGTGGGCAAAVNWVFNLLVSQTFLTLTQ-------------AIGPYGTFLLFAGLAVLGLIFIy 357

                ....*
gi 2208908  501 FLVPE 505
Cdd:cd17360 358 FCVPE 362
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
69-194 1.49e-05

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 47.18  E-value: 1.49e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   69 VSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSfgdkpkAVMATLCFFRFWLGFGIGGDYPLS 148
Cdd:cd17323  35 VANLGVSLFVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQIGCALA------PNIAMLIILRFLQGFFGSSPLAIG 108
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 2208908  149 ATIMSEYANKKTRG----AFIAAVFAMQGFGILAGGmvAIIVSASFKAGF 194
Cdd:cd17323 109 AGTIADLFTPEERGkamgVYSLGPLLGPALGPIIGG--FITQSLGWRWIF 156
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
65-199 2.06e-05

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 46.80  E-value: 2.06e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   65 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGDKPKAVMATLCffrfwLGFGIGGD 144
Cdd:COG2223 238 LSAATAGLLAALFALLGALGRPLGGWLSDRIGGRRVLLIVFALMALGLLLLALALGSLWLFLVLFLL-----LGLALGGG 312
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 2208908  145 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSASFkaGFPAPAY 199
Cdd:COG2223 313 NGAVFALVPDIFPTKNAGAVYGLVGAAGGLGGFLGPLLFGALLDAT--GSYTAAF 365
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
80-205 2.53e-05

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 46.42  E-value: 2.53e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   80 GTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIAsgLSFGDKPkavmATLCFFRFWLGFGIGGDYPLSATIMSEYANKK 159
Cdd:cd17325  43 AQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLL--FAFATSY----WQLLLARFLQGLASAAVWPAAMALIADIAPPE 116
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 2208908  160 TRGAFIAAVFAMQGFGILAGGMVAIIVSASFkaGFPAPAYQDGAVA 205
Cdd:cd17325 117 ERGRAMGIFSSAIGLGFLIGPLLGGLLADAL--GYRAPFLVCAALA 160
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
65-179 3.63e-05

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 46.08  E-value: 3.63e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   65 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMG---RKRVYGMTLMLMVIASIASGLSFGDKPKAVMATLCffrFWLGFGI 141
Cdd:cd17475 231 LSVVAAGALLAVAQLGGALGRIGLGRVSDRVFggrRRPVLVITAAIAAAALLVLSLLSPGTPLWLLVLLL---ILLGLFA 307
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 2208908  142 GGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179
Cdd:cd17475 308 IGWNGLYLTLVAESAGPEQAGTALGLANTINFIGIAIG 345
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
80-183 5.00e-05

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 45.63  E-value: 5.00e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   80 GTLAGQLFFGWLGDKMGRKRVygMTLMLMVIASIASGLSFGDKPKAVMATLCFFrfwLGFGIGGDYPLSATIMSEYANKK 159
Cdd:cd17477 235 GGLLLQWPLGWLADRFDRRRV--LLGCALLGALAALLLPLVPGLPLALLVLLFL---WGGAAGPLYTLALALAGDRLPGD 309
                        90       100
                ....*....|....*....|....
gi 2208908  160 TRGAFIAAVFAMQGFGILAGGMVA 183
Cdd:cd17477 310 ELVAANAALLLLYGLGSVIGPLLA 333
MFS_SVOP_like cd17372
Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator ...
26-165 6.14e-05

Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator Superfamily; This subfamily is composed of synaptic vesicle 2 (SV2)-related protein (SVOP), SVOP-like protein (SVOPL), and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP and SVOPL share structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. The SVOP-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340930 [Multi-domain]  Cd Length: 367  Bit Score: 45.22  E-value: 6.14e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   26 VIAGMGFFTDAYDLFCISLVTKLLGRIYyhvdgavkpgTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTL 105
Cdd:cd17372   2 AYAGMGWVAEAMEMMLLSFVGPAVQCEW----------NLSAWQVALITSVVFAGMMIGSYLWGIVSDKYGRRKGLIISA 71
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  106 MLMVIASIASGLSfgdkpkAVMATLCFFRFWLGFGIGGdYPLSATIMSEYANKKTRGAFI 165
Cdd:cd17372  72 LWTFYAGFLSAFA------PNYMWLIILRCLVGLGLGG-GPQLASWYLEFLPAKSRGTWM 124
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
63-179 1.64e-04

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 44.09  E-value: 1.64e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   63 GTLPPNVSAAVNG--VAFCGTLagqLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFG 140
Cdd:cd17321  27 GASPSQLQWVVNAylLAFAALL---LLAGRLGDRFGRKRVFLIGLALFGLASLLCALAPS------LAFLIAARALQGIG 97
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 2208908  141 IGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179
Cdd:cd17321  98 AAAIMPASLALIAATFPGERRGRALGLWGAVVGIGAALG 136
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
78-190 4.09e-04

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 42.57  E-value: 4.09e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   78 FCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSfgdkpkAVMATLCFFRFWLGFGIGGDYPLSATIMSEYAN 157
Cdd:cd17317  35 FLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFS------PSYELFLVLRFLVGVTSAGIFTVGFVLGMEIVG 108
                        90       100       110
                ....*....|....*....|....*....|...
gi 2208908  158 KKTRgaFIAAVFAMQGFgilAGGMVAIIVSASF 190
Cdd:cd17317 109 PKYR--SFVGILFGLFW---ALGYMLLALLAYL 136
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
68-187 5.69e-04

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 42.16  E-value: 5.69e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   68 NVSAAVNGV----AFCGTLAGQLFFGWLGDKMGRKRVygMTLMLMVIASIASGLSFGDKPkavmATLCFFRFWLGFGIGG 143
Cdd:cd17477  27 GVSTALIGLvasaYYLGILLGSPLVPRLIRRVGHIRA--FAAGAAITAVSVLLLALTDSP----WVWFLLRFVMGIGLAG 100
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 2208908  144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVS 187
Cdd:cd17477 101 LFVVSESWLNALATNENRGRVLGLYSTVLGLGFALGPLLLALVG 144
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
1-194 5.75e-04

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 42.51  E-value: 5.75e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908    1 MAKEQLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDL--FCISLVTKLLGriyyhvdgavkpgtLPPNVSAAVNGVAF 78
Cdd:cd17369 209 KEAGQVVRAPLVEVLRRHWRALLLAIGLRLAENVLFYLFttFALSYATQTLG--------------VDRSTVLLAVLIAS 274
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   79 CGTLAGQLFFGWLGDKMGRKRVY--GMTLMLMVIASIASGLSFGDkpkaVMATLCFFRFWLGFGIGGDYPLSATIMSEYA 156
Cdd:cd17369 275 VVAAITIPLFGWLSDRVGRRPVYlaGALLAALFAFPFFWLLDTGS----TWLIVLAAVVVLGVLHGMMYGPQAAFLAELF 350
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 2208908  157 NKKTRgaFIAAVFAMQGFGILAGGMVAIIVSASFKAGF 194
Cdd:cd17369 351 PTRVR--YTGASLGYQLGAILGGGFAPLIATALVAATG 386
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
73-199 5.94e-04

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 42.18  E-value: 5.94e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   73 VNGVAFCGTLAGQLFFGWLGDKMGRKRV--YGMTLMLMVIASIASGLSFgdkpkavmATLCFFRFWLGFGIGGDYPLSAT 150
Cdd:cd17325 240 LFGAQGLASALSQPPAGKLSDRIGRKPLilIGLLLSAVALLLLPLATSF--------WLLLLLLALLGLGLGLVFPATLA 311
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 2208908  151 IMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSASFkaGFPAPAY 199
Cdd:cd17325 312 LLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDAF--GFATPFL 358
MFS_PLT cd17437
Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The ...
362-511 7.12e-04

Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The plant Polyol transporter (PLT) subfamily includes PLT1-6 from Arabidopsis thaliana and similar transporters. The best characterized member of the group is Polyol transporter 5, also called Sugar-proton symporter PLT5, which mediates the H+-symport of numerous substrates including linear polyols (such as sorbitol, xylitol, erythritol or glycerol), cyclic polyol myo-inositol, and different hexoses, pentoses (including ribose), tetroses, and sugar alcohols. It functions to transport a wide range of substrates into specific sink tissues in the plant. The PLT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340995 [Multi-domain]  Cd Length: 387  Bit Score: 42.00  E-value: 7.12e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  362 FTVFLIDRIGRFIIQWMGFFFMTVFMFALAIPYNHWTHKDNRIGFVIMYSLT-------FFFANFGPnaTTFVVPAEIFP 434
Cdd:cd17437 242 VATFLLDKVGRRPLLLTSTGGMTLSLTALATSLTFIDRNGGGLTWALVLAITavcsfvaFFSIGAGP--ITWVYSSEIFP 319
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2208908  435 ARLRSTCHGISAAAGKAGAIIGAFGFLYAAQpsdpsktdkgyppGIGVKNALIVLGCVNFLGMVFT-FLVPEAKGKSL 511
Cdd:cd17437 320 LRLRAQGASLGVVVNRLMSGTVSMTFLSMSK-------------AITTGGTFFLFAGVAAAAWVFFyFFLPETKGKSL 384
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
78-174 8.71e-04

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 41.79  E-value: 8.71e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   78 FCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYAN 157
Cdd:cd17320  44 LLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASS------IEQLLIARFLQGLGAAAGSVVARAIVRDLYS 117
                        90
                ....*....|....*..
gi 2208908  158 KKTRGAFIAAVFAMQGF 174
Cdd:cd17320 118 GAELAKIFSLLMMILAI 134
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
67-224 1.00e-03

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 41.43  E-value: 1.00e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   67 PNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYP 146
Cdd:cd17489  30 EAVAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATS------VALLLVLRLIHGIGWGAFTT 103
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908  147 LSATIMSEYANKKTR---------------------GAFIAAVFAMQGFGILAGGMVAIIVSASFKAGFPAPAYQDGAVA 205
Cdd:cd17489 104 AAATLVADIIPPSRRgegigyyglattlamalgpalGLFLYQHLGFAVLFIVAAVLALLALLLVFLVKDPPPVAAEEAEA 183
                       170
                ....*....|....*....
gi 2208908  206 STVPEADYVWRIILMFGAI 224
Cdd:cd17489 184 GTRAFRRLVEKKVLPPALI 202
MFS_SLC22A17 cd17445
Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier ...
80-145 1.47e-03

Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier family 22, member 17 (SLC22A17) is also called 24p3 receptor (24p3R), lipocalin-2 receptor, or neutrophil gelatinase-associated lipocalin (NGAL) receptor (NGALR). It functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. LCN2 is a secreted protein of the lipocalin family that induces apoptosis in some types of cells and inhibits bacterial growth by sequestration of the iron-laden bacterial siderophore. Over-expressions of NGAL and NGALR have been found to be correlated with unfavorable clinicopathologic features and poor prognosis of patients with hepatocellular carcinoma. SLC22A17 is a member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341003 [Multi-domain]  Cd Length: 346  Bit Score: 40.91  E-value: 1.47e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2208908   80 GTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIasGLSFGDKPKAVMAtlcfFRFWLGFGIGGDY 145
Cdd:cd17445  48 GFASGYLCLGYTADRLGRRRTLLLSLTLAVPFGV--LVAVAASPSLFMA----MRFLLGAALAGVY 107
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
86-183 1.54e-03

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 41.02  E-value: 1.54e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   86 LFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSfgDKPKAVMAtlcfFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFI 165
Cdd:cd17473  53 PLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFL--DSLYALLA----SRALLGIGVAGIMTLATALIGDYFEGEERAKML 126
                        90       100
                ....*....|....*....|..
gi 2208908  166 AAVFAMQGFG----ILAGGMVA 183
Cdd:cd17473 127 GLQSAAMSLGgvvfLLLGGALA 148
2A0114euk TIGR00894
Na(+)-dependent inorganic phosphate cotransporter; [Transport and binding proteins, Anions]
70-208 1.56e-03

Na(+)-dependent inorganic phosphate cotransporter; [Transport and binding proteins, Anions]


Pssm-ID: 129972 [Multi-domain]  Cd Length: 465  Bit Score: 41.27  E-value: 1.56e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908     70 SAAVNGVAFCGTLAGQLF----FGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGdkpkAVMATLCFFRFWLGFGIGGDY 145
Cdd:TIGR00894  74 SGALQGLILSSHFYGQIIiqipVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG----GGIALVVFCRVIQGLAQGSVS 149
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2208908    146 PLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSASFkAGFPAPAYQDGAVASTV 208
Cdd:TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW-GGWPMIFYVFGIVGCAW 211
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
83-183 2.05e-03

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 40.67  E-value: 2.05e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   83 AGQLFFGWLGDKMGRKRVYgMTLMLMVIASIASGLSFGDKPKAVMATLCFFrfwlGFGIGGDYPLSATIMSEYANKKTRG 162
Cdd:cd17353 264 GGRPFWGWLSDKIGRKNTL-SIAFLIQGVAMFLLPFIGSVAVLFVLGVALI----GFCYGGGFALFPALTADFFGTKNAG 338
                        90       100
                ....*....|....*....|.
gi 2208908  163 AFIAAVFAMQGFGILAGGMVA 183
Cdd:cd17353 339 TNYGLLYTAKGVGGLIGPIIA 359
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
86-183 2.89e-03

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 40.25  E-value: 2.89e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   86 LFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSfgdkpkAVMATLCFFRFWLGFGiGGDYPLSATIMSEY-ANKKTRGA- 163
Cdd:cd17504  49 PILGRLGDLYGRKKVLLIVLAIYTAGSLLAAFA------PNLPVLIAGRALQGIG-GAVFPLAFALVREEfPPERVPVAq 121
                        90       100
                ....*....|....*....|..
gi 2208908  164 -FIAAVFAM-QGFGILAGGMVA 183
Cdd:cd17504 122 gILSATFGIgAGIGLPLGGWIV 143
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
78-179 4.22e-03

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 39.33  E-value: 4.22e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   78 FCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGDKPKAVMATLCffrfwlGFGIGGDYPLSATIMSEYAN 157
Cdd:cd17447  45 FAGVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVFGLASAFSVSYVMFAITRTLT------GFALTGFSIISMVLCVEWVD 118
                        90       100
                ....*....|....*....|....
gi 2208908  158 KKTR--GAFIAAVFAMQGFGILAG 179
Cdd:cd17447 119 IEHRtvAGVLISLFWTVGNMLLAL 142
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
78-194 5.33e-03

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 39.09  E-value: 5.33e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2208908   78 FCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLSFGdkpkavMATLCFFRFWLGFGIGGDYPLSATIMSEYAN 157
Cdd:cd17319  48 FLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATS------LTSLYVLRFLLGVAEAGFFPGAIKALAEWFP 121
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 2208908  158 KKTRGAFIAAVFAMQGFGILAGG--MVAIIVSASFKAGF 194
Cdd:cd17319 122 ARERGRATGLFNSGAPLGAAIGPplSGWLLLLFGWRWAF 160
MFS_SLC22A15 cd17377
Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; ...
69-118 9.52e-03

Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 15 (SLC22A15) is also called fly-like putative transporter 1 (FLIPT1). It is expressed at the highest levels in the kidney and brain. It is a member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A15 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340935 [Multi-domain]  Cd Length: 353  Bit Score: 38.22  E-value: 9.52e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|
gi 2208908   69 VSAAvNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASIASGLS 118
Cdd:cd17377  41 VSLA-SSFFFAGVLIGVVSFGQLSDRFGRKPVYLTGLALDILFAYFNALA 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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