peptidase family S51, partial [uncultured Erysipelotrichaceae bacterium]
type 1 glutamine amidotransferase family protein( domain architecture ID 73)
type 1 glutamine amidotransferase (GATase1) family protein
List of domain hits
Name | Accession | Description | Interval | E-value | ||
GAT_1 super family | cl00020 | Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase ... |
98-141 | 3.11e-03 | ||
Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA, the A4 beta-galactosidase middle domain and peptidase E. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase (CPSase), cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad of typical GATase1 domains, by having a Ser in place of the reactive Cys at the nucleophile elbow. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. Peptidase E has a circular permutation in the common core of a typical GTAse1 domain. The actual alignment was detected with superfamily member pfam03575: Pssm-ID: 469582 [Multi-domain] Cd Length: 206 Bit Score: 36.12 E-value: 3.11e-03
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Name | Accession | Description | Interval | E-value | ||
Peptidase_S51 | pfam03575 | Peptidase family S51; |
98-141 | 3.11e-03 | ||
Peptidase family S51; Pssm-ID: 397574 [Multi-domain] Cd Length: 206 Bit Score: 36.12 E-value: 3.11e-03
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Name | Accession | Description | Interval | E-value | ||
Peptidase_S51 | pfam03575 | Peptidase family S51; |
98-141 | 3.11e-03 | ||
Peptidase family S51; Pssm-ID: 397574 [Multi-domain] Cd Length: 206 Bit Score: 36.12 E-value: 3.11e-03
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Blast search parameters | ||||
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